ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast64c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ011921.1|HVU011921 Hordeum vulgare mRNA for putative amino... 434 e-118
2dbj|AK101693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3gb|AY104698.1| Zea mays PCO142485 mRNA sequence 216 4e-53
4gb|AY107980.1| Zea mays PCO142484 mRNA sequence 202 7e-49
5dbj|AK071182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
6gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8ref|NM_189486.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
10dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
11dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
12dbj|AB041032.1| Oryza sativa gene for metallothionein-like prote... 68 3e-08
13gb|BT019074.1| Zea mays clone Contig647.F mRNA sequence 66 1e-07
14gb|U43718.1|TAU43718 Triticum aestivum pMA1951 mRNA, partial cds 50 0.006
15emb|X94304.1|STPOM14 S.tuberosum mRNA for POM14 protein 48 0.024
16ref|NM_146102.1| Mus musculus expressed sequence AU041783 (AU041... 46 0.094
17gb|BT017732.1| Zea mays clone EL01N0448C02.c mRNA sequence 46 0.094
18gb|BC031515.1| Mus musculus expressed sequence AU041783, mRNA (c... 46 0.094
19gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome... 46 0.094
20gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, com... 46 0.094
21dbj|AK220430.1| Mus musculus mRNA for mKIAA1914 protein 46 0.094
22dbj|AK087449.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 46 0.094
23dbj|AK048649.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 46 0.094
24gb|AY111174.1| Zea mays CL27726_1 mRNA sequence 46 0.094
25emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, co... 44 0.37
26ref|XM_468423.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
28gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
29gb|AY232032.1| Drosophila yakuba clone yak-ad_CG5885 mRNA sequence 42 1.5
30gb|AY950802.1| Bacteriophage SH1, complete genome 42 1.5
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33gb|AC157604.2| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.5
34dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AK063714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36gb|AY057933.1| Bromus inermis stress-inducible membrane pore pro... 42 1.5
37gb|AC121542.8| Mus musculus chromosome 15, clone RP24-137J5, com... 40 5.8
38gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, co... 40 5.8
39emb|AL034407.1|HS657J8 Human DNA sequence from clone RP4-657J8 o... 40 5.8
40emb|AJ719930.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.8
41ref|NM_001008467.1| Gallus gallus anaphase promoting complex sub... 40 5.8
42gb|AE005829.1| Caulobacter crescentus CB15 section 155 of 359 of... 40 5.8
43gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 geno... 40 5.8
44gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.8
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
46gb|AC093511.4| Homo sapiens chromosome 16 clone CTD-2507C6, comp... 40 5.8
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.8
48dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.8
49ref|XM_316558.2| Anopheles gambiae str. PEST ENSANGP00000010090 ... 40 5.8
50gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8 
>emb|AJ011921.1|HVU011921 Hordeum vulgare mRNA for putative amino acid selective channel
           protein
          Length = 674

 Score =  434 bits (219), Expect = e-118
 Identities = 318/351 (90%)
 Strand = Plus / Plus

                                                                       
Query: 80  aggatgcctcgcgcggggctggcggcggggtcgagcaaggtggacatcgccatcgacctc 139
           |||||||||  ||||||||||||||| ||||||| |||||||||| | ||||||||||||
Sbjct: 30  aggatgcctaccgcggggctggcggccgggtcgaacaaggtggacgtggccatcgacctc 89

                                                                       
Query: 140 ggcaacccgctgctcaaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcc 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  ggcaacccgctgctcaaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcc 149

                                                                       
Query: 200 tgcagggtggccgccgaggacgccttcgactgcctccaaagtgggagtgtctcgaagcgc 259
           |||||||||| ||||||||||||||||||||||||||| || |||  | |||||||||||
Sbjct: 150 tgcagggtggtcgccgaggacgccttcgactgcctccacagaggggatatctcgaagcgc 209

                                                                       
Query: 260 aagctcgagcagacactgaagaaaatgtgcaaggagggcgcatattggggtgctgttgct 319
            |||| ||  |||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 210 cagcttgaagagacgctgaagaaaatgtgcaaggagggtgcatattggggtgctgttgct 269

                                                                       
Query: 320 ggagtgtatgtaggcatggagtatggagtggaaagggtccgcggacagtatgactggaaa 379
           || |||||||||||||||||||||||||||||||||||||| ||  |   ||||||||||
Sbjct: 270 ggggtgtatgtaggcatggagtatggagtggaaagggtccgtggtgaccgtgactggaaa 329

                                                              
Query: 380 aacgcgttgattggaggcatcgcaagcggcgccctgatctctgccgcgagc 430
           || |||||||| |||||||| ||||  || |||||| ||||||| ||||||
Sbjct: 330 aatgcgttgataggaggcattgcaactggtgccctggtctctgctgcgagc 380
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>dbj|AK101693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059M19, full
           insert sequence
          Length = 697

 Score =  218 bits (110), Expect = 1e-53
 Identities = 197/226 (87%)
 Strand = Plus / Plus

                                                                       
Query: 126 tcgccatcgacctcggcaacccgctgctcaaccgcaccgtcgacggcttcctcaagatcg 185
           ||||||||||| | || |||||  | ||||||||||||||||||||||||||||||||||
Sbjct: 132 tcgccatcgacatggggaaccccttcctcaaccgcaccgtcgacggcttcctcaagatcg 191

                                                                       
Query: 186 gcgccgtcggcgcctgcagggtggccgccgaggacgccttcgactgcctccaaagtggga 245
           |||||||||| || |||| ||| |||||||||||| | |||||||||||||| || ||| 
Sbjct: 192 gcgccgtcggggcgtgcaaggtcgccgccgaggacacattcgactgcctccacagagggg 251

                                                                       
Query: 246 gtgtctcgaagcgcaagctcgagcagacactgaagaaaatgtgcaaggagggcgcatatt 305
            ||| || |||| |||||| ||||| |  ||||||||||||||||||||||| || ||||
Sbjct: 252 atgtttcaaagcacaagcttgagcatatgctgaagaaaatgtgcaaggagggtgcctatt 311

                                                         
Query: 306 ggggtgctgttgctggagtgtatgtaggcatggagtatggagtgga 351
           ||||| |||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 312 ggggtactgttgctggggtgtatgtgggcatggagtacggagtgga 357
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>gb|AY104698.1| Zea mays PCO142485 mRNA sequence
          Length = 678

 Score =  216 bits (109), Expect = 4e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 152 ctcaaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcctgcagggtggcc 211
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 208 ctcaaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcctgcaaggtggct 267

                                                                       
Query: 212 gccgaggacgccttcgactgcctccaaagtgggagtgtctcgaagcgcaagctcgagcag 271
           ||||||||  ||||||| |||||||| || |||  ||| ||||||| |||| | ||||| 
Sbjct: 268 gccgaggagaccttcgagtgcctccacaggggggatgtttcgaagcacaaggttgagcat 327

                                                                       
Query: 272 acactgaagaaaatgtgcaaggagggcgcatattggggtgctgttgctggagtgtatgta 331
            | |||| ||| ||||||||||||||||||||||||||  ||||||||||||| ||||| 
Sbjct: 328 gccctgaggaagatgtgcaaggagggcgcatattggggcactgttgctggagtttatgtg 387

                                        
Query: 332 ggcatggagtatggagtggaaagggtccg 360
           ||||||| ||| || ||||||||||||||
Sbjct: 388 ggcatggtgtacggcgtggaaagggtccg 416
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>gb|AY107980.1| Zea mays PCO142484 mRNA sequence
          Length = 690

 Score =  202 bits (102), Expect = 7e-49
 Identities = 180/206 (87%)
 Strand = Plus / Plus

                                                                       
Query: 155 aaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcctgcagggtggccgcc 214
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 94  aaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcctgcaaggtggcggcc 153

                                                                       
Query: 215 gaggacgccttcgactgcctccaaagtgggagtgtctcgaagcgcaagctcgagcagaca 274
           |||||  |||||||||||||||| || |||  ||| || ||||||||| | |||||  | 
Sbjct: 154 gaggagaccttcgactgcctccacaggggggatgtttcaaagcgcaaggttgagcatgcc 213

                                                                       
Query: 275 ctgaagaaaatgtgcaaggagggcgcatattggggtgctgttgctggagtgtatgtaggc 334
           |||||||| ||||||||||||||||||||||||||  |||||||||| || || || |||
Sbjct: 214 ctgaagaagatgtgcaaggagggcgcatattgggggactgttgctggcgtctacgtgggc 273

                                     
Query: 335 atggagtatggagtggaaagggtccg 360
            ||| |||||| ||||| ||||||||
Sbjct: 274 gtggtgtatggcgtggagagggtccg 299
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>dbj|AK071182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082P21, full
           insert sequence
          Length = 784

 Score =  101 bits (51), Expect = 2e-18
 Identities = 159/195 (81%)
 Strand = Plus / Plus

                                                                       
Query: 152 ctcaaccgcaccgtcgacggcttcctcaagatcggcgccgtcggcgcctgcagggtggcc 211
           |||||||||||||||||||||||||||||||| ||||| || || || |||| ||| || 
Sbjct: 111 ctcaaccgcaccgtcgacggcttcctcaagattggcgctgttggggcttgcaaggtcgct 170

                                                                       
Query: 212 gccgaggacgccttcgactgcctccaaagtgggagtgtctcgaagcgcaagctcgagcag 271
           ||||| ||  ||||||| ||||| || || |||   ||||| |||| |||  | |||   
Sbjct: 171 gccgaagagaccttcgagtgccttcacagaggggacgtctcaaagcacaaagttgagagt 230

                                                                       
Query: 272 acactgaagaaaatgtgcaaggagggcgcatattggggtgctgttgctggagtgtatgta 331
            |||| |||||||| |||||||| ||||||||||||||| || |||| || || ||||| 
Sbjct: 231 gcactcaagaaaatttgcaaggaaggcgcatattggggtactattgcgggtgtatatgtg 290

                          
Query: 332 ggcatggagtatgga 346
           |||||||||||||||
Sbjct: 291 ggcatggagtatgga 305
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                         
Query: 126   tcgccatcgacctcggcaacccgctgctcaaccgcaccgtcgacggcttcctcaagatcg 185
             ||||||||||| | || |||||  | ||||||||||||||||||||||||||||||||||
Sbjct: 86525 tcgccatcgacatggggaaccccttcctcaaccgcaccgtcgacggcttcctcaagatcg 86584

                    
Query: 186   gcgccgt 192
             |||||||
Sbjct: 86585 gcgccgt 86591



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 312   ctgttgctggagtgtatgtaggcatggagtatggagtgga 351
             |||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 88082 ctgttgctggggtgtatgtgggcatggagtacggagtgga 88121



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 275   ctgaagaaaatgtgcaaggagggcgcatattggggt 310
             ||||||||||||||||||||||| || |||||||||
Sbjct: 87909 ctgaagaaaatgtgcaaggagggtgcctattggggt 87944



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 191   gtcggcgcctgcagggtggccgccgaggacgccttcgactgcctcca 237
             ||||| || |||| ||| |||||||||||| | ||||||||||||||
Sbjct: 86684 gtcggggcgtgcaaggtcgccgccgaggacacattcgactgcctcca 86730
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                          
Query: 126    tcgccatcgacctcggcaacccgctgctcaaccgcaccgtcgacggcttcctcaagatcg 185
              ||||||||||| | || |||||  | ||||||||||||||||||||||||||||||||||
Sbjct: 569126 tcgccatcgacatggggaaccccttcctcaaccgcaccgtcgacggcttcctcaagatcg 569185

                     
Query: 186    gcgccgt 192
              |||||||
Sbjct: 569186 gcgccgt 569192



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 312    ctgttgctggagtgtatgtaggcatggagtatggagtgga 351
              |||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 570683 ctgttgctggggtgtatgtgggcatggagtacggagtgga 570722



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 275    ctgaagaaaatgtgcaaggagggcgcatattggggt 310
              ||||||||||||||||||||||| || |||||||||
Sbjct: 570510 ctgaagaaaatgtgcaaggagggtgcctattggggt 570545



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 191    gtcggcgcctgcagggtggccgccgaggacgccttcgactgcctcca 237
              ||||| || |||| ||| |||||||||||| | ||||||||||||||
Sbjct: 569285 gtcggggcgtgcaaggtcgccgccgaggacacattcgactgcctcca 569331
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>ref|NM_189486.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 255

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 152 ctcaaccgcaccgtcgacggcttcctcaagatcggcgc 189
           |||||||||||||||||||||||||||||||| |||||
Sbjct: 76  ctcaaccgcaccgtcgacggcttcctcaagattggcgc 113
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 152      ctcaaccgcaccgtcgacggcttcctcaagatcggcgc 189
                |||||||||||||||||||||||||||||||| |||||
Sbjct: 43036666 ctcaaccgcaccgtcgacggcttcctcaagattggcgc 43036703



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 278      aagaaaatgtgcaaggagggcgcatattggggt 310
                |||||||| |||||||| |||||||||||||||
Sbjct: 43037346 aagaaaatttgcaaggaaggcgcatattggggt 43037378
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>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698H10
          Length = 153449

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                    
Query: 152    ctcaaccgcaccgtcgacggcttcctcaagatcggcgc 189
              |||||||||||||||||||||||||||||||| |||||
Sbjct: 137545 ctcaaccgcaccgtcgacggcttcctcaagattggcgc 137582



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 278    aagaaaatgtgcaaggagggcgcatattggggt 310
              |||||||| |||||||| |||||||||||||||
Sbjct: 138225 aagaaaatttgcaaggaaggcgcatattggggt 138257
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>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 152   ctcaaccgcaccgtcgacggcttcctcaagatcggcgc 189
             |||||||||||||||||||||||||||||||| |||||
Sbjct: 33695 ctcaaccgcaccgtcgacggcttcctcaagattggcgc 33732



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 278   aagaaaatgtgcaaggagggcgcatattggggt 310
             |||||||| |||||||| |||||||||||||||
Sbjct: 34375 aagaaaatttgcaaggaaggcgcatattggggt 34407
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>dbj|AB041032.1| Oryza sativa gene for metallothionein-like protein, complete cds
          Length = 4072

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 152 ctcaaccgcaccgtcgacggcttcctcaagatcggcgc 189
           |||||||||||||||||||||||||||||||| |||||
Sbjct: 102 ctcaaccgcaccgtcgacggcttcctcaagattggcgc 139



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 278 aagaaaatgtgcaaggagggcgcatattggggt 310
           |||||||| |||||||| |||||||||||||||
Sbjct: 783 aagaaaatttgcaaggaaggcgcatattggggt 815
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>gb|BT019074.1| Zea mays clone Contig647.F mRNA sequence
          Length = 774

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 284 atgtgcaaggagggcgcatattggggtgctgttgctggagtgtatgtaggcatggagtat 343
           |||||||||| ||| |||||||||||  |||||||||| || ||||| ||||||| ||| 
Sbjct: 432 atgtgcaaggggggggcatattggggccctgttgctggggtttatgtgggcatggtgtag 373

                            
Query: 344 ggagtggaaagggtccg 360
           || | ||||||||||||
Sbjct: 372 gggggggaaagggtccg 356
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>gb|U43718.1|TAU43718 Triticum aestivum pMA1951 mRNA, partial cds
          Length = 777

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 132 tcgacctcggcaacccgctgctcaaccgc 160
           ||||||||||| |||||||||||||||||
Sbjct: 654 tcgacctcggccacccgctgctcaaccgc 626
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>emb|X94304.1|STPOM14 S.tuberosum mRNA for POM14 protein
          Length = 537

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 276 tgaagaaaatgtgcaaggagggcgcatattggggtgctgttgctggagtgtatgtaggca 335
           ||||||||||||| || || || || ||||||||  |||||||||| || ||||  || |
Sbjct: 206 tgaagaaaatgtgtaaagaaggtgcttattgggggactgttgctggggtatatgctggaa 265

                       
Query: 336 tggagtatggag 347
           ||||||||||||
Sbjct: 266 tggagtatggag 277
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>ref|NM_146102.1| Mus musculus expressed sequence AU041783 (AU041783), mRNA
          Length = 3581

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 259  caagctcgagcagacactgaagaaaat 285
            |||||| ||||||||||||||||||||
Sbjct: 2210 caagctggagcagacactgaagaaaat 2236
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>gb|BT017732.1| Zea mays clone EL01N0448C02.c mRNA sequence
          Length = 868

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 134 gacctcggcaacccgctgctcaaccgc 160
           ||||||||| |||||||||||||||||
Sbjct: 170 gacctcggccacccgctgctcaaccgc 196
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>gb|BC031515.1| Mus musculus expressed sequence AU041783, mRNA (cDNA clone MGC:28084
            IMAGE:3711746), complete cds
          Length = 3581

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 259  caagctcgagcagacactgaagaaaat 285
            |||||| ||||||||||||||||||||
Sbjct: 2210 caagctggagcagacactgaagaaaat 2236
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>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence
          Length = 154390

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 259   caagctcgagcagacactgaagaaaat 285
             |||||| ||||||||||||||||||||
Sbjct: 66171 caagctggagcagacactgaagaaaat 66145
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>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence
          Length = 176356

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 259    caagctcgagcagacactgaagaaaat 285
              |||||| ||||||||||||||||||||
Sbjct: 146409 caagctggagcagacactgaagaaaat 146435
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>dbj|AK220430.1| Mus musculus mRNA for mKIAA1914 protein
          Length = 3532

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 259  caagctcgagcagacactgaagaaaat 285
            |||||| ||||||||||||||||||||
Sbjct: 2177 caagctggagcagacactgaagaaaat 2203
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>dbj|AK087449.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130120P06 product:similar to CDNA
            FLJ14564 FIS, CLONE NT2RM4000229, WEAKLY SIMILAR TO
            GALLUS GALLUS ACTIN FILAMENT-ASSOCIATED PROTEIN
            (AFAP-110) MRNA (FRAGMENT) [Homo sapiens], full insert
            sequence
          Length = 3600

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 259  caagctcgagcagacactgaagaaaat 285
            |||||| ||||||||||||||||||||
Sbjct: 2245 caagctggagcagacactgaagaaaat 2271
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>dbj|AK048649.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130093H02 product:similar to CDNA
            FLJ14564 FIS, CLONE NT2RM4000229, WEAKLY SIMILAR TO
            GALLUS GALLUS ACTIN FILAMENT-ASSOCIATED PROTEIN
            (AFAP-110) MRNA (FRAGMENT) [Homo sapiens], full insert
            sequence
          Length = 3669

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 259  caagctcgagcagacactgaagaaaat 285
            |||||| ||||||||||||||||||||
Sbjct: 2314 caagctggagcagacactgaagaaaat 2340
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>gb|AY111174.1| Zea mays CL27726_1 mRNA sequence
          Length = 802

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 134 gacctcggcaacccgctgctcaaccgc 160
           ||||||||| |||||||||||||||||
Sbjct: 648 gacctcggccacccgctgctcaaccgc 622
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>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             1/8
          Length = 348517

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 133   cgacctcggcaacccgctgctcaacc 158
             ||||| ||||||||||||||||||||
Sbjct: 48097 cgaccccggcaacccgctgctcaacc 48072
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>ref|XM_468423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 176 ctcaagatcggcgccgtcggc 196
           |||||||||||||||||||||
Sbjct: 664 ctcaagatcggcgccgtcggc 684
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 132      tcgacctcggcaacccgctgctcaaccgc 160
                ||||||||||| ||||||| |||||||||
Sbjct: 10820522 tcgacctcggccacccgctcctcaaccgc 10820550
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 132   tcgacctcggcaacccgctgctcaaccgc 160
             ||||||||||| ||||||| |||||||||
Sbjct: 34365 tcgacctcggccacccgctcctcaaccgc 34337
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>gb|AY232032.1| Drosophila yakuba clone yak-ad_CG5885 mRNA sequence
          Length = 540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 395 ggcatcgcaagcggcgccctg 415
           |||||||||||||||||||||
Sbjct: 520 ggcatcgcaagcggcgccctg 540
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>gb|AY950802.1| Bacteriophage SH1, complete genome
          Length = 30889

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   ccgccgaggacgccttcgact 230
             |||||||||||||||||||||
Sbjct: 13869 ccgccgaggacgccttcgact 13889
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 132      tcgacctcggcaacccgctgctcaaccgc 160
                ||||||||||| ||||||| |||||||||
Sbjct: 10818623 tcgacctcggccacccgctcctcaaccgc 10818651
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 176      ctcaagatcggcgccgtcggc 196
                |||||||||||||||||||||
Sbjct: 35153080 ctcaagatcggcgccgtcggc 35153100
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>gb|AC157604.2| Ornithorhynchus anatinus chromosome UNK clone OABb-185A1, complete
             sequence
          Length = 136586

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    gagagatagggagggagaccg 56
             |||||||||||||||||||||
Sbjct: 62990 gagagatagggagggagaccg 63010
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   ctcaagatcggcgccgtcggc 196
             |||||||||||||||||||||
Sbjct: 48436 ctcaagatcggcgccgtcggc 48456
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>dbj|AK063714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C03, full
           insert sequence
          Length = 839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 132 tcgacctcggcaacccgctgctcaaccgc 160
           ||||||||||| ||||||| |||||||||
Sbjct: 178 tcgacctcggccacccgctcctcaaccgc 206
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>gb|AY057933.1| Bromus inermis stress-inducible membrane pore protein (BG15) mRNA,
           complete cds
          Length = 819

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 132 tcgacctcggcaacccgctgctcaaccgc 160
           ||||||||||| ||||||| |||||||||
Sbjct: 141 tcgacctcggccacccgctcctcaaccgc 169
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>gb|AC121542.8| Mus musculus chromosome 15, clone RP24-137J5, complete sequence
          Length = 164489

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    gacagtatgactggaaaaac 382
              ||||||||||||||||||||
Sbjct: 106646 gacagtatgactggaaaaac 106665
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>gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, complete sequence
          Length = 214392

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gacagtatgactggaaaaac 382
              ||||||||||||||||||||
Sbjct: 187697 gacagtatgactggaaaaac 187678
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>emb|AL034407.1|HS657J8 Human DNA sequence from clone RP4-657J8 on chromosome Xq26.1-26.3,
            complete sequence
          Length = 98954

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 340  gtatggagtggaaagggtcc 359
            ||||||||||||||||||||
Sbjct: 2171 gtatggagtggaaagggtcc 2190
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>emb|AJ719930.1| Gallus gallus mRNA for hypothetical protein, clone 8g15
          Length = 2474

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 90  gcgcggggctggcggcgggg 109
           ||||||||||||||||||||
Sbjct: 81  gcgcggggctggcggcgggg 62
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>ref|NM_001008467.1| Gallus gallus anaphase promoting complex subunit 10 (ANAPC10), mRNA
          Length = 2474

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 90  gcgcggggctggcggcgggg 109
           ||||||||||||||||||||
Sbjct: 81  gcgcggggctggcggcgggg 62
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>gb|AE005829.1| Caulobacter crescentus CB15 section 155 of 359 of the complete genome
          Length = 11420

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  gacatcgccatcgacctcgg 141
            ||||||||||||||||||||
Sbjct: 3118 gacatcgccatcgacctcgg 3137
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>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
             sequence
          Length = 158550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tgtgccgactgccgagtgct 31
             ||||||||||||||||||||
Sbjct: 19808 tgtgccgactgccgagtgct 19827
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    ggtggccgccgaggacgccttcga 228
              |||||||||||||| |||||||||
Sbjct: 861806 ggtggccgccgaggtcgccttcga 861783
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       tgtgccgactgccgagtgct 31
                ||||||||||||||||||||
Sbjct: 21044583 tgtgccgactgccgagtgct 21044564
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>gb|AC093511.4| Homo sapiens chromosome 16 clone CTD-2507C6, complete sequence
          Length = 189250

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 259    caagctcgagcagacactgaagaaaatg 286
              |||||| ||| |||||||||||||||||
Sbjct: 111159 caagctagagtagacactgaagaaaatg 111186
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 92      gcggggctggcggcggggtc 111
               ||||||||||||||||||||
Sbjct: 2174295 gcggggctggcggcggggtc 2174314
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     cggcgccgtcggcgcctgca 203
               ||||||||||||||||||||
Sbjct: 1296821 cggcgccgtcggcgcctgca 1296840
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>ref|XM_316558.2| Anopheles gambiae str. PEST ENSANGP00000010090
           (ENSANGG00000007601), partial mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  cggggctggcggcggggtcg 112
           ||||||||||||||||||||
Sbjct: 588 cggggctggcggcggggtcg 569
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       tgtgccgactgccgagtgct 31
                ||||||||||||||||||||
Sbjct: 21055847 tgtgccgactgccgagtgct 21055828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,979,574
Number of Sequences: 3902068
Number of extensions: 2979574
Number of successful extensions: 65524
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64868
Number of HSP's gapped (non-prelim): 655
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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