| Clone Name | bast64c07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| | ||||||| |||||||||||| ||| || || || | Sbjct: 95 agaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgcgg 154 Query: 260 cgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgcgc 319 ||||||||| || ||||||| ||||||||||||||| ||| ||||||||||||| |||| Sbjct: 155 cgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggcgc 214 Query: 320 cggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccg 379 ||||||| ||| |||||||||||| |||| ||| |||||||| |||||||| ||||||| Sbjct: 215 cggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggccg 274 Query: 380 gcgcgcaggcgctcgtggcgctcaagggc 408 | |||||||||||||||||||||||||| Sbjct: 275 ggacgcaggcgctcgtggcgctcaagggc 303
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| | ||||||| |||||||||||| ||| || || || | Sbjct: 26079484 agaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgcgg 26079543 Query: 260 cgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgcgc 319 ||||||||| || ||||||| ||||||||||||||| ||| ||||||||||||| |||| Sbjct: 26079544 cgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggcgc 26079603 Query: 320 cggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccg 379 ||||||| ||| |||||||||||| |||| ||| |||||||| |||||||| ||||||| Sbjct: 26079604 cggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggccg 26079663 Query: 380 gcgcgcaggcgctcgtggcgctcaagggc 408 | |||||||||||||||||||||||||| Sbjct: 26079664 ggacgcaggcgctcgtggcgctcaagggc 26079692 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 302 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 361 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 26067143 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 26067084 Query: 362 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 401 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 26067083 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 26067044
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| | ||||||| |||||||||||| ||| || || || | Sbjct: 23415 agaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgcgg 23474 Query: 260 cgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgcgc 319 ||||||||| || ||||||| ||||||||||||||| ||| ||||||||||||| |||| Sbjct: 23475 cgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggcgc 23534 Query: 320 cggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccg 379 ||||||| ||| |||||||||||| |||| ||| |||||||| |||||||| ||||||| Sbjct: 23535 cggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggccg 23594 Query: 380 gcgcgcaggcgctcgtggcgctcaagggc 408 | |||||||||||||||||||||||||| Sbjct: 23595 ggacgcaggcgctcgtggcgctcaagggc 23623 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 302 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 361 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 11074 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 11015 Query: 362 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 401 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 11014 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 10975
>gb|AY108865.1| Zea mays PCO075691 mRNA sequence Length = 425 Score = 155 bits (78), Expect = 2e-34 Identities = 171/202 (84%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 ||||||||||||||||| ||||||| |||||||||||| ||| ||||||| || Sbjct: 162 agaagttcccggcggggcgtgcgtacgcgtcgtgcgaggacctgccgaagctgggcgcgt 221 Query: 260 cgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgcgc 319 ||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||||| |||| Sbjct: 222 cgctgcactggacgtacgacgcgtccaagagctccctgtcggtggcgttcgtggcggcgc 281 Query: 320 cggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccg 379 | |||| ||| |||||||||||| |||| || ||||| ||||||||||||||||||| Sbjct: 282 ccgcggcggcgggcgggtgggtggcgtggggcctgaaccctacgggcgagggcatggccg 341 Query: 380 gcgcgcaggcgctcgtggcgct 401 ||||||||||||| |||||||| Sbjct: 342 gcgcgcaggcgctggtggcgct 363 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 100 gcctccacgatgccgcgccacatcgcgctgctgttgctcctgctcct 146 |||||||| ||||||||||| |||||||||| ||| ||||||||| Sbjct: 65 gcctccacaatgccgcgccatctcgcgctgctcctgcccctgctcct 111
>ref|XM_483411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1418 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 302 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 361 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 256 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 315 Query: 362 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 401 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 316 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 355
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 302 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 361 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 102704 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 102645 Query: 362 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 401 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 102644 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 102605
>dbj|AK058714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D11, full insert sequence Length = 1418 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 302 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 361 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 256 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 315 Query: 362 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 401 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 316 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 355
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 333 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 392 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 150199 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 150258 Query: 393 cgtggcgctcaagggc 408 ||| || |||||||| Sbjct: 150259 cgtcgccttcaagggc 150274 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 334 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 393 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 140717 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 140658 Query: 394 gt 395 || Sbjct: 140657 gt 140656 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 150060 agaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgcga 150119 Query: 260 cgctgcactggacctacgacg 280 ||||||||||||||||||||| Sbjct: 150120 cgctgcactggacctacgacg 150140
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 333 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 392 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 34873 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 34932 Query: 393 cgtggcgctcaagggc 408 ||| || |||||||| Sbjct: 34933 cgtcgccttcaagggc 34948 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 334 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 393 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 25391 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 25332 Query: 394 gt 395 || Sbjct: 25331 gt 25330 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 34734 agaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgcga 34793 Query: 260 cgctgcactggacctacgacg 280 ||||||||||||||||||||| Sbjct: 34794 cgctgcactggacctacgacg 34814
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 333 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 392 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 19104914 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 19104973 Query: 393 cgtggcgctcaagggc 408 ||| || |||||||| Sbjct: 19104974 cgtcgccttcaagggc 19104989 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 334 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 393 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 19095431 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 19095372 Query: 394 gt 395 || Sbjct: 19095371 gt 19095370 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 200 agaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggccg 259 |||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 19104775 agaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgcga 19104834 Query: 260 cgctgcactggacctacgacg 280 ||||||||||||||||||||| Sbjct: 19104835 cgctgcactggacctacgacg 19104855
>gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, complete sequence Length = 183186 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaaccagcaca 54 |||||||||||||| |||||||||||| Sbjct: 127078 acaaacacacacacacaaaccagcaca 127052
>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence Length = 177531 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 aacaaacacacacacgcaaacca 49 ||||||||||||||||||||||| Sbjct: 57518 aacaaacacacacacgcaaacca 57540
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 cacgcaaaccagcacaagtcct 60 |||||||||||||||||||||| Sbjct: 69121 cacgcaaaccagcacaagtcct 69142
>gb|AY872256.1|AY872256S1 Oncorhynchus mykiss IgH.A locus, partial sequence Length = 106788 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 aaacacacacacgcaaaccagc 51 |||||||||||||||||||||| Sbjct: 69202 aaacacacacacgcaaaccagc 69223
>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR04F21, complete sequence Length = 171226 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 gctgctgttgctcctgctcctc 147 |||||||||||||||||||||| Sbjct: 45504 gctgctgttgctcctgctcctc 45483
>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete sequence Length = 178251 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 gctgctgttgctcctgctcctc 147 |||||||||||||||||||||| Sbjct: 140880 gctgctgttgctcctgctcctc 140901
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 agggcatggccggcgcgcaggcgct 392 |||||||| |||||||||||||||| Sbjct: 38410 agggcatgaccggcgcgcaggcgct 38434
>ref|XM_361363.1| Magnaporthe grisea 70-15 hypothetical protein (MG03837.4) partial mRNA Length = 2733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 2407 gctgctgttgctcctgctcct 2387
>emb|BX000704.26| Zebrafish DNA sequence from clone CH211-201B9 in linkage group 3, complete sequence Length = 191916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aacaaacacacacacgcaaac 47 ||||||||||||||||||||| Sbjct: 59211 aacaaacacacacacgcaaac 59191
>gb|AC111647.10| Rattus norvegicus 4 BAC CH230-103E9 (Children's Hospital Oakland Research Institute) complete sequence Length = 232538 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 aaacacacacacgcaaaccagcaca 54 |||||||||||| |||||||||||| Sbjct: 32765 aaacacacacacacaaaccagcaca 32789
>gb|AC060225.12| Homo sapiens 3 BAC RP11-23J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172464 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 acacacacacgcaaaccagca 52 ||||||||||||||||||||| Sbjct: 47731 acacacacacgcaaaccagca 47711
>gb|AE005733.1| Caulobacter crescentus CB15 section 59 of 359 of the complete genome Length = 8219 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ccggcgccgccgcgctcaccg 430 ||||||||||||||||||||| Sbjct: 7242 ccggcgccgccgcgctcaccg 7222
>tpg|BK003676.1| TPA: TPA_inf: Drosophila melanogaster HDC05200 (HDC05200) gene, complete cds Length = 4612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 2864 gctgctgttgctcctgctcct 2884
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 148552 gctgctgttgctcctgctcct 148572
>emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, complete sequence Length = 169865 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aacaaacacacacacgcaaac 47 ||||||||||||||||||||| Sbjct: 152102 aacaaacacacacacgcaaac 152082
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 393 cgtggcgctcaagggctccggcgccgccgcgct 425 |||||||||| |||||||||||||||||||| Sbjct: 801040 cgtggcgctcgccggctccggcgccgccgcgct 801008
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 360 cacgggcgagggcatggccggcgcgcaggcgct 392 |||| ||||||||| |||||||||||||||||| Sbjct: 1513576 cacgtgcgagggca-ggccggcgcgcaggcgct 1513607
>gb|AF051662.1|DROHEYFRU2 Drosophila heteroneura fruitless (fru) gene, alternative splice products, 5' flanking region, exons 1 through 7 and complete cds Length = 17532 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aacaacaaacacacacacgca 44 ||||||||||||||||||||| Sbjct: 10105 aacaacaaacacacacacgca 10125
>ref|XM_320101.2| Anopheles gambiae str. PEST ENSANGP00000010653 (ENSANGG00000008164), partial mRNA Length = 1015 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aacaaacacacacacgcaaac 47 ||||||||||||||||||||| Sbjct: 932 aacaaacacacacacgcaaac 912
>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3, complete sequence Length = 160599 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 aacaaacacacacacgcaaac 47 ||||||||||||||||||||| Sbjct: 77684 aacaaacacacacacgcaaac 77704
>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete sequence Length = 265215 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 114109 gctgctgttgctcctgctcct 114129
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones DS08614 and DS00667, complete sequence Length = 100575 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 63497 gctgctgttgctcctgctcct 63517
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 cgatgccgcgccacatcgcgc 127 ||||||||||||||||||||| Sbjct: 3201171 cgatgccgcgccacatcgcgc 3201151
>gb|AC174764.1| Gasterosteus aculeatus clone VMRC28-119C14, complete sequence Length = 127803 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 aacaaacacacacacgcaaac 47 ||||||||||||||||||||| Sbjct: 70587 aacaaacacacacacgcaaac 70607
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 149362 gctgctgttgctcctgctcct 149342 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gctgctgttgctcctgctcct 146 ||||||||||||||||||||| Sbjct: 149227 gctgctgttgctcctgctcct 149207
>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence Length = 188464 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 acaagtcctcactcaccactg 72 ||||||||||||||||||||| Sbjct: 51172 acaagtcctcactcaccactg 51192
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 1374 gggctccggcgccgccgcgc 1393
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 104988 cgctgctgttgctcctgctc 105007
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 87843 cgctgctgttgctcctgctc 87862
>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence Length = 190884 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 105720 ctgctgttgctcctgctcct 105701
>gb|AC102151.8| Mus musculus chromosome 18, clone RP23-312L17, complete sequence Length = 175398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 acaacaaacacacacacgca 44 |||||||||||||||||||| Sbjct: 170636 acaacaaacacacacacgca 170617
>gb|AC165072.13| Mus musculus chromosome 18, clone RP23-345E17, complete sequence Length = 223019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 acaacaaacacacacacgca 44 |||||||||||||||||||| Sbjct: 59363 acaacaaacacacacacgca 59344
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 135283 ctgctgttgctcctgctcct 135264
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ggcatggccggcgcgcaggc 389 |||||||||||||||||||| Sbjct: 3952532 ggcatggccggcgcgcaggc 3952551
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 34133895 ctgctgttgctcctgctcct 34133914
>gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, complete sequence Length = 237076 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgctgttgctcctgctcctc 147 |||||||||||||||||||| Sbjct: 203258 tgctgttgctcctgctcctc 203277
>gb|AC007683.5| Homo sapiens BAC clone RP11-401L13 from 7, complete sequence Length = 155735 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacaaacacacacacgcaaa 46 |||||||||||||||||||| Sbjct: 99212 aacaaacacacacacgcaaa 99193
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gccggcgcgcaggcgctcgt 395 |||||||||||||||||||| Sbjct: 41472 gccggcgcgcaggcgctcgt 41491
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 gaacaacaaacacacacacgcaaa 46 |||||| ||||||||||||||||| Sbjct: 86839 gaacaagaaacacacacacgcaaa 86816
>emb|CR354398.17| Zebrafish DNA sequence from clone CH211-142C14 in linkage group 7, complete sequence Length = 180088 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 140297 acaaacacacacacgcaaac 140316
>gb|AC122400.4| Mus musculus BAC clone RP24-103C10 from chromosome 7, complete sequence Length = 166252 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 75230 acaaacacacacacgcaaac 75249
>ref|XM_846699.1| PREDICTED: Canis familiaris similar to prostate tumor over expressed gene 1 (predicted) (LOC483946), mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgcgctgctgttgctcctgctcct 146 |||||||||| ||||||||||||| Sbjct: 526 cgcgctgctgctgctcctgctcct 503
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence Length = 157296 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aacaacaaacacacacacgcaaac 47 |||||||||||||||||| ||||| Sbjct: 109535 aacaacaaacacacacacacaaac 109512
>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23, complete sequence Length = 209342 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 aacaaacacacacacgcaaaccag 50 |||||||||||||| ||||||||| Sbjct: 8523 aacaaacacacacaggcaaaccag 8546
>emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chromosome 10 Contains a ribosomal protein S27 (metallopanstimulin 1) (MPS1, MPS-1) (RPS27) pseudogene, complete sequence Length = 50865 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gggggccaacgggtgggtggcctg 347 |||||||||| ||||||||||||| Sbjct: 12070 gggggccaacaggtgggtggcctg 12047
>emb|AL512428.13| Human DNA sequence from clone RP11-373L11 on chromosome 6 Contains the 3' end of the C6orf32 gene for chromosome 6 open reading frame 32 (PL48, DIFF40, DIFF48) and a CpG island, complete sequence Length = 70800 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgctgttgctcctgctcctc 147 |||||||||||||||||||| Sbjct: 61138 tgctgttgctcctgctcctc 61119
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 1461 gggctccggcgccgccgcgc 1480
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 1417 gggctccggcgccgccgcgc 1436
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cggcgcgcaggcgctcgtgg 397 |||||||||||||||||||| Sbjct: 169566 cggcgcgcaggcgctcgtgg 169585
>gb|AC117436.6| Homo sapiens 3 BAC RP11-69K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 133636 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gagaacaacaaacacacaca 40 |||||||||||||||||||| Sbjct: 102764 gagaacaacaaacacacaca 102783
>gb|AY055842.1| Drosophila melanogaster strain R3-24 hairy (h) gene, complete cds Length = 9970 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7772 acaaacacacacacgcaaac 7791
>gb|AY055841.1| Drosophila melanogaster strain R3-74 hairy (h) gene, complete cds Length = 9967 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7799 acaaacacacacacgcaaac 7818
>gb|AY055840.1| Drosophila melanogaster strain R3-95 hairy (h) gene, complete cds Length = 9812 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7652 acaaacacacacacgcaaac 7671
>gb|AY055839.1| Drosophila melanogaster strain R3-48 hairy (h) gene, complete cds Length = 9917 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7739 acaaacacacacacgcaaac 7758
>gb|AY055838.1| Drosophila melanogaster strain R3-53 hairy (h) gene, complete cds Length = 9937 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7756 acaaacacacacacgcaaac 7775
>gb|AY055837.1| Drosophila melanogaster strain R3-19 hairy (h) gene, complete cds Length = 9947 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7753 acaaacacacacacgcaaac 7772
>gb|AY055836.1| Drosophila melanogaster strain R3-2 hairy (h) gene, complete cds Length = 9967 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7767 acaaacacacacacgcaaac 7786
>gb|AY055835.1| Drosophila melanogaster strain R3-6 hairy (h) gene, complete cds Length = 9924 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7751 acaaacacacacacgcaaac 7770
>gb|AY055834.1| Drosophila melanogaster strain R3-107 hairy (h) gene, complete cds Length = 9924 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7751 acaaacacacacacgcaaac 7770
>gb|AY055833.1| Drosophila melanogaster strain R3-105 hairy (h) gene, complete cds Length = 9924 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 7751 acaaacacacacacgcaaac 7770
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ccggcgccgccgcgctcacc 429 |||||||||||||||||||| Sbjct: 273467 ccggcgccgccgcgctcacc 273486
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ccggcgccgccgcgctcacc 429 |||||||||||||||||||| Sbjct: 39142 ccggcgccgccgcgctcacc 39161
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gctggcgttcgtggccgcgc 319 |||||||||||||||||||| Sbjct: 95987 gctggcgttcgtggccgcgc 96006
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 ggctccggcgccgccgcgctcacc 429 |||| ||||||||||||||||||| Sbjct: 19932 ggctacggcgccgccgcgctcacc 19955
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gagaacaacaaacacacaca 40 |||||||||||||||||||| Sbjct: 61653 gagaacaacaaacacacaca 61634
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gagaacaacaaacacacaca 40 |||||||||||||||||||| Sbjct: 23643 gagaacaacaaacacacaca 23624
>emb|BX640481.14| Zebrafish DNA sequence from clone DKEY-3H23 in linkage group 10, complete sequence Length = 111244 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 30067 acaaacacacacacgcaaac 30048
>emb|CR407702.15| Zebrafish DNA sequence from clone DKEY-171M10 in linkage group 17, complete sequence Length = 155486 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 90942 acaaacacacacacgcaaac 90923
>gb|AF448526.1| Mytilus galloprovincialis precollagen-D mRNA, complete cds Length = 2848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 2130 ctgctgttgctcctgctcct 2111
>gb|AF445321.1| Penaeus monodon putative protein mRNA, complete cds Length = 667 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 621 acaaacacacacacgcaaac 640
>gb|AY119633.1| Drosophila melanogaster RE40955 full insert cDNA Length = 2151 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 1588 acaaacacacacacgcaaac 1607
>gb|AC010019.5| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195148 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 8778 acaaacacacacacgcaaac 8759
>gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166857 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 154460 acaaacacacacacgcaaac 154441
>gb|AC116049.3| Homo sapiens BAC clone RP11-396M11 from 4, complete sequence Length = 84979 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 84274 acaaacacacacacgcaaac 84255
>gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306, section 4 of 469 of the complete genome Length = 11366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gccggcgcgcaggcgctcgt 395 |||||||||||||||||||| Sbjct: 7816 gccggcgcgcaggcgctcgt 7835
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 3766 gggctccggcgccgccgcgc 3785
>gb|AC099782.2| Homo sapiens chromosome 3 clone RP11-852E15, complete sequence Length = 209772 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 agaacaacaaacacacacac 41 |||||||||||||||||||| Sbjct: 164779 agaacaacaaacacacacac 164760
>gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, complete sequence Length = 182913 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 gggggccaacgggtgggtggcctg 347 |||||||||| ||||||||||||| Sbjct: 135290 gggggccaacaggtgggtggcctg 135313
>gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, complete sequence Length = 182912 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gggggccaacgggtgggtggcctg 347 |||||||||| ||||||||||||| Sbjct: 47618 gggggccaacaggtgggtggcctg 47595
>ref|NM_079253.3| Drosophila melanogaster hairy CG6494-RA, transcript variant A (h), mRNA Length = 2125 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 1594 acaaacacacacacgcaaac 1613
>ref|NM_078688.2| Drosophila melanogaster domeless CG14226-RA (dome), mRNA Length = 4877 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 3716 tcgcgctgctgttgctgctgctcc 3693
>gb|AC103842.2| Homo sapiens chromosome 8, clone RP11-367J23, complete sequence Length = 150506 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 aaaccagcacaagtcctcactcaccact 71 ||||||||||||| |||| ||||||||| Sbjct: 10163 aaaccagcacaagccctctctcaccact 10190
>ref|NM_001014577.1| Drosophila melanogaster hairy CG6494-RB, transcript variant B (h), mRNA Length = 2321 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 1790 acaaacacacacacgcaaac 1809
>gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teqing receptor kinase (TRKd) pseudogene, complete sequence; and receptor kinase TRKa (TRKa), receptor kinase TRKe (TRKe), and receptor kinase TRKb (TRKb) genes, complete cds Length = 33301 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 25112 cgctgctgttgctcctgctc 25093
>gb|AC104051.3| Homo sapiens chromosome 8, clone CTD-2339F6, complete sequence Length = 120723 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 aaaccagcacaagtcctcactcaccact 71 ||||||||||||| |||| ||||||||| Sbjct: 67100 aaaccagcacaagccctctctcaccact 67127
>gb|AY075427.1| Drosophila melanogaster LD46805 full length cDNA Length = 4814 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 3637 tcgcgctgctgttgctgctgctcc 3614
>gb|AC171135.2| Helobdella robusta clone CH306-1A6, complete sequence Length = 84513 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 34227 acaaacacacacacgcaaac 34208 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 34185 acaaacacacacacgcaaac 34166
>gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24C-24D, BAC clone BACR22M14, complete sequence Length = 173380 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 114809 ctgctgttgctcctgctcct 114828
>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197909 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 aacaaacacacacacgcaaaccag 50 ||||||||||||||| |||||||| Sbjct: 173446 aacaaacacacacacacaaaccag 173469
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 74221 tcgcgctgctgttgctgctgctcc 74244
>emb|BX276115.11| Zebrafish DNA sequence from clone DKEY-274M17 in linkage group 11, complete sequence Length = 175216 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 29668 acaaacacacacacgcaaac 29649
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 27757829 cgctgctgttgctcctgctc 27757810 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 27616985 cgctgctgttgctcctgctc 27616966
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 34224367 ctgctgttgctcctgctcct 34224386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 27190396 gggctccggcgccgccgcgc 27190377
>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR48D02, complete sequence Length = 181728 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 29463 ctgctgttgctcctgctcct 29482
>gb|AC110759.3| Homo sapiens BAC clone RP11-25H12 from 4, complete sequence Length = 100802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 1295 acaaacacacacacgcaaac 1276
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 97707 ctgctgttgctcctgctcct 97726
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ccggcgccgccgcgctcacc 429 |||||||||||||||||||| Sbjct: 8922201 ccggcgccgccgcgctcacc 8922220 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 cggcgccgccgcgctcaccg 430 |||||||||||||||||||| Sbjct: 1441682 cggcgccgccgcgctcaccg 1441663
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 98074 gggctccggcgccgccgcgc 98055
>emb|BX470163.8| Zebrafish DNA sequence from clone DKEY-27A9 in linkage group 18, complete sequence Length = 241301 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaacaaacacacacacgca 44 |||||||||||||||||||| Sbjct: 80761 acaacaaacacacacacgca 80780
>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 493 ctgctgttgctcctgctcct 474
>gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13 of 83 of the complete sequence Length = 295211 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 245374 ctgctgttgctcctgctcct 245393
>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete sequence Length = 285158 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 61591 acaaacacacacacgcaaac 61610
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 324134 tcgcgctgctgttgctgctgctcc 324157
>emb|CR387933.10| Zebrafish DNA sequence from clone DKEY-81L17 in linkage group 3, complete sequence Length = 182618 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 76828 acaaacacacacacgcaaac 76809
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gcatggccggcgcgcaggcgctcg 394 ||||||||||||| |||||||||| Sbjct: 3557991 gcatggccggcgcccaggcgctcg 3557968
>gb|AC004279.1|AC004279 Drosophila melanogaster DNA sequence (P1 DS06502 (D146)), complete sequence Length = 85338 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctgctgttgctcctgctcct 146 |||||||||||||||||||| Sbjct: 61765 ctgctgttgctcctgctcct 61784
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 27781817 cgctgctgttgctcctgctc 27781798 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgctgctgttgctcctgctc 144 |||||||||||||||||||| Sbjct: 27640973 cgctgctgttgctcctgctc 27640954
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gggctccggcgccgccgcgc 424 |||||||||||||||||||| Sbjct: 1441 gggctccggcgccgccgcgc 1460
>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence Length = 187465 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 aacaaacacacacacgcaaaccag 50 ||||||||||||||| |||||||| Sbjct: 95678 aacaaacacacacacacaaaccag 95655
>emb|AM167855.1| Trichostrongylus tenuis microsatellite DNA, clone Tte404REP Length = 190 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 133 acaaacacacacacgcaaac 114
>emb|X15904.1|DMHAIRG Drosophila melanogaster DNA for hairy gene Length = 10600 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 8097 acaaacacacacacgcaaac 8116
>gb|L44583.1|ATHAVAPB Arabidopsis thaliana vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p) gene, complete cds Length = 2546 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gagaacaacaaacacacaca 40 |||||||||||||||||||| Sbjct: 804 gagaacaacaaacacacaca 785
>gb|AY147847.1| Drosophila melanogaster cytokine receptor domeless (dome) mRNA, complete cds Length = 4805 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
>emb|X15905.1|DMHAIRR Drosophila melanogaster mRNA for hairy gene Length = 1976 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acaaacacacacacgcaaac 47 |||||||||||||||||||| Sbjct: 1445 acaaacacacacacgcaaac 1464
>emb|AJ420377.1|DME420377 Drosophila melanogaster mRNA for putative interleukine JAK/STAT receptor (dome gene) Length = 4830 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tcgcgctgctgttgctcctgctcc 145 |||||||||||||||| ||||||| Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
>dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic gene cluster (vio A, vio B, vio C, vio D), complete cds Length = 9077 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 gcatggccggcgcgcaggcgctcg 394 ||||||||||||| |||||||||| Sbjct: 8849 gcatggccggcgcccaggcgctcg 8872 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,184,542 Number of Sequences: 3902068 Number of extensions: 3184542 Number of successful extensions: 159818 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 157321 Number of HSP's gapped (non-prelim): 2492 length of query: 459 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 437 effective length of database: 17,147,199,772 effective search space: 7493326300364 effective search space used: 7493326300364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)