ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64c04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 260 bits (131), Expect = 3e-66 Identities = 286/337 (84%), Gaps = 3/337 (0%) Strand = Plus / Minus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgggccggagcggctgcgggtg 166 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 20760917 caccggccggccgaccggaagacgtggatggcggagctcgggccggagcggctgcgcgtg 20760858 Query: 167 caccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgcccttc 226 |||||| ||||||||||||| || ||| |||| || ||| | |||||||| | || ||| Sbjct: 20760857 caccagctggtgtggccggggacgcacgactcggcgacgaacaagatcggcatcccgttc 20760798 Query: 227 gtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacgggc 286 || || |||||||||||||||||||||||||| || || ||||| ||||||||| ||||| Sbjct: 20760797 gtgacgcgccccttcgcgcagtgccagtcgctgtcggtgtacgagcagctcgccgcgggc 20760738 Query: 287 tgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgtc 346 |||| || ||||||| ||||||||| |||| || ||||||||||||||| || || Sbjct: 20760737 gcccgcgtcatcgacgtgcgcgtccaggaggagcggcgcgtctgccacggcgtgc---tc 20760681 Query: 347 gcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgtc 406 || | |||| ||||||||||||| ||||||||||| || ||||||| | |||||| | Sbjct: 20760680 gcaacctactccgtcgacgtcgtgctcgacgacgtgaggaggttcctcggcgagacggcg 20760621 Query: 407 gcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 |||||||| | |||||||||||||||||||||||| Sbjct: 20760620 tcggaggtggtgatcctcgaggtgcgcaccgagttcg 20760584
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 260 bits (131), Expect = 3e-66 Identities = 286/337 (84%), Gaps = 3/337 (0%) Strand = Plus / Minus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgggccggagcggctgcgggtg 166 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 35946 caccggccggccgaccggaagacgtggatggcggagctcgggccggagcggctgcgcgtg 35887 Query: 167 caccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgcccttc 226 |||||| ||||||||||||| || ||| |||| || ||| | |||||||| | || ||| Sbjct: 35886 caccagctggtgtggccggggacgcacgactcggcgacgaacaagatcggcatcccgttc 35827 Query: 227 gtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacgggc 286 || || |||||||||||||||||||||||||| || || ||||| ||||||||| ||||| Sbjct: 35826 gtgacgcgccccttcgcgcagtgccagtcgctgtcggtgtacgagcagctcgccgcgggc 35767 Query: 287 tgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgtc 346 |||| || ||||||| ||||||||| |||| || ||||||||||||||| || || Sbjct: 35766 gcccgcgtcatcgacgtgcgcgtccaggaggagcggcgcgtctgccacggcgtgc---tc 35710 Query: 347 gcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgtc 406 || | |||| ||||||||||||| ||||||||||| || ||||||| | |||||| | Sbjct: 35709 gcaacctactccgtcgacgtcgtgctcgacgacgtgaggaggttcctcggcgagacggcg 35650 Query: 407 gcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 |||||||| | |||||||||||||||||||||||| Sbjct: 35649 tcggaggtggtgatcctcgaggtgcgcaccgagttcg 35613
>dbj|AK065856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D02, full insert sequence Length = 1213 Score = 260 bits (131), Expect = 3e-66 Identities = 286/337 (84%), Gaps = 3/337 (0%) Strand = Plus / Plus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgggccggagcggctgcgggtg 166 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 159 caccggccggccgaccggaagacgtggatggcggagctcgggccggagcggctgcgcgtg 218 Query: 167 caccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgcccttc 226 |||||| ||||||||||||| || ||| |||| || ||| | |||||||| | || ||| Sbjct: 219 caccagctggtgtggccggggacgcacgactcggcgacgaacaagatcggcatcccgttc 278 Query: 227 gtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacgggc 286 || || |||||||||||||||||||||||||| || || ||||| ||||||||| ||||| Sbjct: 279 gtgacgcgccccttcgcgcagtgccagtcgctgtcggtgtacgagcagctcgccgcgggc 338 Query: 287 tgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgtc 346 |||| || ||||||| ||||||||| |||| || ||||||||||||||| || || Sbjct: 339 gcccgcgtcatcgacgtgcgcgtccaggaggagcggcgcgtctgccacggcgtgc---tc 395 Query: 347 gcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgtc 406 || | |||| ||||||||||||| ||||||||||| || ||||||| | |||||| | Sbjct: 396 gcaacctactccgtcgacgtcgtgctcgacgacgtgaggaggttcctcggcgagacggcg 455 Query: 407 gcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 |||||||| | |||||||||||||||||||||||| Sbjct: 456 tcggaggtggtgatcctcgaggtgcgcaccgagttcg 492
>dbj|AK061726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B04, full insert sequence Length = 1477 Score = 260 bits (131), Expect = 3e-66 Identities = 286/337 (84%), Gaps = 3/337 (0%) Strand = Plus / Plus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgggccggagcggctgcgggtg 166 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 389 caccggccggccgaccggaagacgtggatggcggagctcgggccggagcggctgcgcgtg 448 Query: 167 caccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgcccttc 226 |||||| ||||||||||||| || ||| |||| || ||| | |||||||| | || ||| Sbjct: 449 caccagctggtgtggccggggacgcacgactcggcgacgaacaagatcggcatcccgttc 508 Query: 227 gtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacgggc 286 || || |||||||||||||||||||||||||| || || ||||| ||||||||| ||||| Sbjct: 509 gtgacgcgccccttcgcgcagtgccagtcgctgtcggtgtacgagcagctcgccgcgggc 568 Query: 287 tgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgtc 346 |||| || ||||||| ||||||||| |||| || ||||||||||||||| || || Sbjct: 569 gcccgcgtcatcgacgtgcgcgtccaggaggagcggcgcgtctgccacggcgtgc---tc 625 Query: 347 gcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgtc 406 || | |||| ||||||||||||| ||||||||||| || ||||||| | |||||| | Sbjct: 626 gcaacctactccgtcgacgtcgtgctcgacgacgtgaggaggttcctcggcgagacggcg 685 Query: 407 gcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 |||||||| | |||||||||||||||||||||||| Sbjct: 686 tcggaggtggtgatcctcgaggtgcgcaccgagttcg 722
>gb|AY112292.1| Zea mays CL379_2 mRNA sequence Length = 1061 Score = 182 bits (92), Expect = 6e-43 Identities = 279/338 (82%), Gaps = 5/338 (1%) Strand = Plus / Plus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgg-gccggagcggctgcgggt 165 ||||||||||||||||| ||| ||||||||||||||| || ||||| ||||||| || Sbjct: 391 caccggccggcggaccggaagcggtggatggcggagctgggcgccggca-ggctgcgcgt 449 Query: 166 gcaccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgccctt 225 |||||||||||||||||| ||||| ||| |||| ||||| | | |||||||||||| || Sbjct: 450 gcaccaggtggtgtggcccggcacgcacgactcggccaccgaccggatcggcgtgccgtt 509 Query: 226 cgtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacggg 285 ||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || ||| Sbjct: 510 cgtgacccgccccttcgcgcagtgccagtcgctgtccgtgtacgagcagctggcgctggg 569 Query: 286 ctgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgt 345 | ||| |||||||||| ||||||||||||| |||||||| ||||||||| || | Sbjct: 570 cgcgcgcgtcctcgacgtgcgcgtccagaaggggcgccgcgtatgccacggc---gtcct 626 Query: 346 cgcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgt 405 || | ||| |||||||||| || | ||||||||| ||||||||| |||||||| Sbjct: 627 ggccacgtaccccgtcgacgtggtgctggacgacgtggccaggttcctgggcgagaccga 686 Query: 406 cgcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 | |||||| ||||||| ||||||||||||||||||| Sbjct: 687 gtccgaggtggtcgtcctggaggtgcgcaccgagttcg 724
>gb|AY105723.1| Zea mays PCO102084 mRNA sequence Length = 1551 Score = 133 bits (67), Expect = 5e-28 Identities = 270/337 (80%), Gaps = 3/337 (0%) Strand = Plus / Plus Query: 107 caccggccggcggaccgcaagacgtggatggcggagctcgggccggagcggctgcgggtg 166 ||||||||||||||||| ||| ||||||||||||||| || | || |||||| ||| Sbjct: 474 caccggccggcggaccggaagcggtggatggcggagctgggcgccgacaagctgcgcgtg 533 Query: 167 caccaggtggtgtggccgggcacccacaactccgccacggccgagatcggcgtgcccttc 226 ||||||||||||||||| ||||| ||| |||| ||||| | ||||||||||||| | Sbjct: 534 caccaggtggtgtggcccggcacgcacgactcggccaccaacaagatcggcgtgccgctg 593 Query: 227 gtcacccgccccttcgcgcagtgccagtcgctctccgtctacgaccagctcgccacgggc 286 || |||||||||||||||||||||||||| | || || ||||| ||||| |||| |||| Sbjct: 594 gtgacccgccccttcgcgcagtgccagtccatgtctgtgtacgagcagctggccatgggc 653 Query: 287 tgccgcctcctcgacgtccgcgtccagaaggaccgccgcgtctgccacggcccgctcgtc 346 ||| || ||||||| ||||| ||| |||| ||||| |||||||||||| || | Sbjct: 654 acgcgcgtcatcgacgtgcgcgtgcaggaggagcgccgggtctgccacggca---tcctg 710 Query: 347 gcgagctacaccgtcgacgtcgtcatcgacgacgtgcggcggttcctggccgagaccgtc 406 |||| ||| |||| ||||| || | ||||||||| | |||||||||| |||||||| Sbjct: 711 gcgacgtaccccgtggacgtggtgctggacgacgtgagccggttcctgggcgagaccgag 770 Query: 407 gcggaggtgctcgtcctcgaggtgcgcaccgagttcg 443 | ||| ||||| |||| ||| | ||||||||||||| Sbjct: 771 tccgagctgctcatcctggagatccgcaccgagttcg 807
>gb|DQ478172.1| Porcine respiratory and reproductive syndrome virus isolate PRRSV0004276 envelope glycoprotein gene, complete cds Length = 603 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 17 caggtcaaccgcgtcaaggaagtggc 42 |||| ||||||||||||||||||||| Sbjct: 279 caggccaaccgcgtcaaggaagtggc 254
>ref|XM_847352.1| PREDICTED: Canis familiaris similar to Myeloperoxidase precursor (MPO) (LOC609986), mRNA Length = 2205 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cagcagcaggcgctggccagg 67 ||||||||||||||||||||| Sbjct: 2035 cagcagcaggcgctggccagg 2055
>ref|XM_546579.2| PREDICTED: Canis familiaris similar to Asialoglycoprotein receptor 1 (ASGPR 1) (ASGP-R 1) (Hepatic lectin H1) (LOC489461), mRNA Length = 1038 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 tgtcggcctcgggccaggacttccc 96 |||| |||||||||||||||||||| Sbjct: 718 tgtccgcctcgggccaggacttccc 694
>ref|XM_851891.1| PREDICTED: Canis familiaris similar to C-type lectin, superfamily member 14 isoform 2, transcript variant 4 (LOC607405), mRNA Length = 2019 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 tgtcggcctcgggccaggacttccc 96 |||| |||||||||||||||||||| Sbjct: 1003 tgtccgcctcgggccaggacttccc 979
>ref|XM_851850.1| PREDICTED: Canis familiaris similar to C-type lectin, superfamily member 14 isoform 2, transcript variant 3 (LOC607405), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 tgtcggcctcgggccaggacttccc 96 |||| |||||||||||||||||||| Sbjct: 931 tgtccgcctcgggccaggacttccc 907
>ref|XM_843632.1| PREDICTED: Canis familiaris similar to C-type lectin, superfamily member 14 isoform 2, transcript variant 1 (LOC607405), mRNA Length = 1971 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 tgtcggcctcgggccaggacttccc 96 |||| |||||||||||||||||||| Sbjct: 955 tgtccgcctcgggccaggacttccc 931
>ref|XM_851767.1| PREDICTED: Canis familiaris similar to C-type lectin, superfamily member 14 isoform 2, transcript variant 2 (LOC607405), mRNA Length = 1914 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 tgtcggcctcgggccaggacttccc 96 |||| |||||||||||||||||||| Sbjct: 898 tgtccgcctcgggccaggacttccc 874
>emb|AJ224512.2|SNO224512 Streptomyces nogalater nogalamycin biosynthesis genes Length = 19632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 tcgacgtcgtcatcgacgacg 380 ||||||||||||||||||||| Sbjct: 13438 tcgacgtcgtcatcgacgacg 13418
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ccgtcgacgtcgtcatcgacg 377 ||||||||||||||||||||| Sbjct: 2896653 ccgtcgacgtcgtcatcgacg 2896633
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ggccggagcggctgcgggtgc 167 ||||||||||||||||||||| Sbjct: 1834612 ggccggagcggctgcgggtgc 1834632
>gb|U46937.1|MPU46937 Mycobacterium phage DS6A, NheI D fragment sequence Length = 6611 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 gcggctgcgggtgcaccaggtggtg 178 ||||||||||||||| ||||||||| Sbjct: 4749 gcggctgcgggtgcagcaggtggtg 4773
>gb|BT023949.1| Drosophila melanogaster IP03879 full insert cDNA Length = 5011 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 caccgtcgacgtcgtcatcg 374 |||||||||||||||||||| Sbjct: 923 caccgtcgacgtcgtcatcg 942
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 caccgtcgacgtcgtcatcg 374 |||||||||||||||||||| Sbjct: 78963 caccgtcgacgtcgtcatcg 78944
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ggccggagcggctgcgggtg 166 |||||||||||||||||||| Sbjct: 1455586 ggccggagcggctgcgggtg 1455605
>gb|AY658842.1| Synthetic construct Peudomonas aeruginosa clone FLH042232.01F PA1946 gene, partial cds Length = 960 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 agatcggcgtgcccttcgtc 229 |||||||||||||||||||| Sbjct: 413 agatcggcgtgcccttcgtc 432
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ggccaggcgcctgtcggcct 80 |||||||||||||||||||| Sbjct: 525645 ggccaggcgcctgtcggcct 525664
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gggccggagcggctgcgggtgcac 169 |||||||||||||||||| ||||| Sbjct: 3300337 gggccggagcggctgcggctgcac 3300314
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tgccgcctcctcgacgtccgcgtc 310 |||||||||||||| ||||||||| Sbjct: 27010 tgccgcctcctcgaggtccgcgtc 27033
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tgccgcctcctcgacgtccgcgtc 310 |||||||||||||| ||||||||| Sbjct: 25845 tgccgcctcctcgaggtccgcgtc 25868
>gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosome 8, complete sequence Length = 207577 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aggaagtggcgagccagcag 52 |||||||||||||||||||| Sbjct: 69266 aggaagtggcgagccagcag 69285
>ref|XM_745632.1| Aspergillus fumigatus Af293 thiazole biosynthesis enzyme (Afu6g08360) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 cgagatcggcgtgcccttcg 227 |||||||||||||||||||| Sbjct: 414 cgagatcggcgtgcccttcg 433
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ccgtcgcggaggtgctcgtc 421 |||||||||||||||||||| Sbjct: 1467523 ccgtcgcggaggtgctcgtc 1467504
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 cctcctcgacgtccgcgtcc 311 |||||||||||||||||||| Sbjct: 3611276 cctcctcgacgtccgcgtcc 3611295
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 cgacgtcgtcatcgacgacg 380 |||||||||||||||||||| Sbjct: 1345600 cgacgtcgtcatcgacgacg 1345619
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 gggccggagcggctgcgggtgcac 169 |||||||||||||||||| ||||| Sbjct: 128877 gggccggagcggctgcggctgcac 128900
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctcgggccggagcggctgcg 162 |||||||||||||||||||| Sbjct: 147104 ctcgggccggagcggctgcg 147123
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccggagcggctgcgggtgc 167 |||||||||||||||||||| Sbjct: 190954 gccggagcggctgcgggtgc 190935
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gccagcagcaggcgctggcc 64 |||||||||||||||||||| Sbjct: 1169922 gccagcagcaggcgctggcc 1169941
>gb|AE012192.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 100 of 460 of the complete genome Length = 11053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 agccagcagcaggcgctggc 63 |||||||||||||||||||| Sbjct: 3220 agccagcagcaggcgctggc 3239
>ref|NM_167487.1| Drosophila melanogaster disco-related CG32577-RA (disco-r), mRNA Length = 4684 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 caccgtcgacgtcgtcatcg 374 |||||||||||||||||||| Sbjct: 131 caccgtcgacgtcgtcatcg 150
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 tgccgcctcctcgacgtccgcgtc 310 |||||||||||||| ||||||||| Sbjct: 26249 tgccgcctcctcgaggtccgcgtc 26272
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agccagcagcaggcgctggc 63 |||||||||||||||||||| Sbjct: 3949210 agccagcagcaggcgctggc 3949191
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ccgagatcggcgtgcccttc 226 |||||||||||||||||||| Sbjct: 384150 ccgagatcggcgtgcccttc 384169
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gggccggagcggctgcgggtgcac 169 |||||||||||||||||| ||||| Sbjct: 3300448 gggccggagcggctgcggctgcac 3300425
>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence Length = 163170 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aggaagtggcgagccagcag 52 |||||||||||||||||||| Sbjct: 108701 aggaagtggcgagccagcag 108720
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 ccgagaccgtcgcggaggtgctcg 419 |||| ||||||||||||||||||| Sbjct: 433110 ccgaaaccgtcgcggaggtgctcg 433133
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aggaagtggcgagccagcag 52 |||||||||||||||||||| Sbjct: 90550 aggaagtggcgagccagcag 90569
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 gggccggagcggctgcgggtgcac 169 |||||||||||||||||| ||||| Sbjct: 125210 gggccggagcggctgcggctgcac 125187
>gb|AE004621.1| Pseudomonas aeruginosa PAO1, section 182 of 529 of the complete genome Length = 10565 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 agatcggcgtgcccttcgtc 229 |||||||||||||||||||| Sbjct: 5349 agatcggcgtgcccttcgtc 5368
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gttcctggccgagaccgtcg 407 |||||||||||||||||||| Sbjct: 2614464 gttcctggccgagaccgtcg 2614445
>gb|AE005077.1| Halobacterium sp. NRC-1 section 108 of 170 of the complete genome Length = 14625 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 ccgcctcctcgacgtccgcgtcca 312 |||||||||||||| ||||||||| Sbjct: 11258 ccgcctcctcgacgcccgcgtcca 11235
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tcgacgtcgtcatcgacgac 379 |||||||||||||||||||| Sbjct: 1518868 tcgacgtcgtcatcgacgac 1518887
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 caccgtcgacgtcgtcatcg 374 |||||||||||||||||||| Sbjct: 114037 caccgtcgacgtcgtcatcg 114018
>gb|AY882987.1| Sinorhizobium fredii strain HH303 aminoglycoside3'-phospotransferase-like gene, complete sequence Length = 6988 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 caccgtcgacgtcgtcatcg 374 |||||||||||||||||||| Sbjct: 6947 caccgtcgacgtcgtcatcg 6928
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gctcgggccggagcggctgc 161 |||||||||||||||||||| Sbjct: 2872711 gctcgggccggagcggctgc 2872692
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcggaggtgctcgtcctcga 426 |||||||||||||||||||| Sbjct: 91053 gcggaggtgctcgtcctcga 91034
>gb|U49979.1|OVU49979 Orf virus E10R homolog gene, partial cds, and DNA polymerase gene, complete cds Length = 3395 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tgccgcctcctcgacgtccgcgtc 310 |||||||||||||| ||||||||| Sbjct: 750 tgccgcctcctcgaggtccgcgtc 727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,392,573 Number of Sequences: 3902068 Number of extensions: 2392573 Number of successful extensions: 53039 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51130 Number of HSP's gapped (non-prelim): 1908 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
