Clone Information

BLAST Search Result

Clone Name	bast64c03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Saliv...	34	0.21
2	PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precur...	34	0.21
3	EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400...	33	0.47
4	PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allel...	32	0.62
5	FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) ...	32	0.62
6	SEM6B_HUMAN (Q9H3T3) Semaphorin-6B precursor (Semaphorin Z) (Sem...	32	0.62
7	PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allel...	32	0.62
8	WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)	32	1.0
9	PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allel...	32	1.0
10	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	31	1.4
11	PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precur...	31	1.8
12	CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)	31	1.8
13	SON_MOUSE (Q9QX47) SON protein	30	2.3
14	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	30	2.3
15	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	30	2.3
16	SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme...	30	2.3
17	MEIS2_MOUSE (P97367) Homeobox protein Meis2 (Meis1-related prote...	30	3.1
18	MEIS2_HUMAN (O14770) Homeobox protein Meis2 (Meis1-related prote...	30	3.1
19	MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc an...	30	3.1
20	IF2_MYCPA (Q73VV4) Translation initiation factor IF-2	30	3.1
21	SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF	30	4.0
22	FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)	30	4.0
23	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	30	4.0
24	VNUA_PRVKA (P33485) Probable nuclear antigen	30	4.0
25	FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity ...	30	4.0
26	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	30	4.0
27	PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein ...	30	4.0
28	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	30	4.0
29	HES1_CHICK (O57337) Transcription factor HES-1 (C-HAIRY1)	30	4.0
30	EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400...	29	5.2
31	SETBP_HUMAN (Q9Y6X0) SET-binding protein (SEB)	29	5.2
32	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	29	5.2
33	TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki...	29	6.8
34	ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein...	29	6.8
35	ADA2A_BOVIN (Q28838) Alpha-2A adrenergic receptor (Alpha-2A adre...	29	6.8
36	SECD_MYCTU (Q50634) Protein-export membrane protein secD	29	6.8
37	LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1	28	8.9
38	RW1_HUMAN (Q92545) RW1 protein (Fragment)	28	8.9
39	DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphat...	28	8.9
40	LRC50_MOUSE (Q9D2H9) Leucine-rich repeat-containing protein 50	28	8.9
41	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	28	8.9
42	FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription fact...	28	8.9
43	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	28	8.9
44	CLCN1_CANFA (Q9MZT1) Chloride channel protein, skeletal muscle (...	28	8.9
45	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	28	8.9
46	DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphat...	28	8.9
47	POLN_HEVPA (P33424) Non-structural polyprotein (EC 2.7.7.48) (RN...	28	8.9

>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           P   P P    P++   PPAGQP  P +P  GG P
Sbjct: 343 PQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 377

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>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           P   P P    P++   PPAGQP  P +P  GG P
Sbjct: 353 PQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 387

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>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (hDomino)
            (CAG repeat protein 32) (Trinucleotide repeat-containing
            gene 12 protein)
          Length = 3160

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 242  QEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQ 340
            Q+PP P P P+A G +    PPA QP    QPQ
Sbjct: 2555 QQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQ 2587

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>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242 QEPPLPD----PHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           Q PP P     P P    P++   PPAG+P  P  P  GG P
Sbjct: 224 QGPPPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRP 265

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>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte|
           formin) (CLL-associated antigen KW-13)
          Length = 1100

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 242 QEPPLP-DPHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           Q PPLP  P P    P  GDLPP   P  P     G VP
Sbjct: 564 QAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVP 602

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>SEM6B_HUMAN (Q9H3T3) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)|
          Length = 888

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 16/27 (59%), Positives = 16/27 (59%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPA 331
           P P PHP ALGPR  D    G PL PA
Sbjct: 721 PTPHPHPHALGPRAWD---HGHPLLPA 744

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>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 238

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242 QEPPLPD----PHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           Q PP P     P P    P++   PPAG+P  P  P  GG P
Sbjct: 186 QGPPPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRP 227

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>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/41 (53%), Positives = 22/41 (53%)
 Frame = +2

Query: 239 RQEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRG 361
           RQ PP P P   A   RRG LPP   PLHP   Q GG P G
Sbjct: 156 RQLPPPPTP---ANEERRGGLPPL--PLHPGGDQ-GGPPVG 190



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
           PP+P P P    P      PA  PL PA    GG+  GG
Sbjct: 390 PPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGG 428

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>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor|
           (Salivary proline-rich protein Po) (Parotid o protein)
           [Contains: Protein N1; Glycosylated protein A]
          Length = 247

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242 QEPPLPD----PHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           Q PP P     P P    P++   PPAG+P  P  P  GG P
Sbjct: 195 QGPPPPGKPQGPPPAGGNPQQPQDPPAGKPQGPPPPPQGGRP 236

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>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 242 QEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQ 340
           +EPPLP P PR  GP     PP   P  P + +
Sbjct: 164 EEPPLPPPPPRRKGPLPAGPPPEDVPGPPKRKE 196

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>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid|
           salivary glycoprotein G1) (Proline-rich protein G1)
          Length = 309

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242 QEPPLP----DPHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           Q PP P     P P    P++   PPAG+P  P  P  GG P
Sbjct: 258 QRPPPPRRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRP 299

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>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
           P+  P PR    R GD  PAG P  P  P   G P GG
Sbjct: 723 PIGPPGPRG---RTGDAGPAGPPGPPGPPGPPGPPSGG 757

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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 248  PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHG 346
            PPLP   P  + P   + PP   PL P +P  G
Sbjct: 1101 PPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEG 1133

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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +2

Query: 251  PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
            P+  P PR    R GD  PAG P  P  P   G P GG
Sbjct: 1150 PIGPPGPRG---RTGDSGPAGPPGPPGPPGPPGPPSGG 1184

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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +2

Query: 251  PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
            P+  P PR    R GD  PAG P  P  P   G P GG
Sbjct: 1150 PIGPPGPRG---RTGDSGPAGPPGPPGPPGPPGPPSGG 1184

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>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 248  PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHG 346
            PPLP   P  + P   + PP   PL P +P  G
Sbjct: 1147 PPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEG 1179

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>MEIS2_MOUSE (P97367) Homeobox protein Meis2 (Meis1-related protein 1)|
          Length = 477

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +2

Query: 248 PPLPDPHPRAL--GPRRGDLPPAGQPLHPAQPQHGGVP 355
           PP   PHP  L  GP      P+  P HPA   HGG P
Sbjct: 409 PPQMTPHPTQLRHGPPMHSYLPS-HPHHPAMVMHGGPP 445

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>MEIS2_HUMAN (O14770) Homeobox protein Meis2 (Meis1-related protein 1)|
          Length = 477

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +2

Query: 248 PPLPDPHPRAL--GPRRGDLPPAGQPLHPAQPQHGGVP 355
           PP   PHP  L  GP      P+  P HPA   HGG P
Sbjct: 409 PPQMTPHPTQLRHGPPMHSYLPS-HPHHPAMMMHGGPP 445

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>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 582

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQ 340
           PP P PHP ++      LPPA  P+   QPQ
Sbjct: 379 PPHPHPHPHSVA-----LPPAHLPVQQQQPQ 404

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>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2|
          Length = 925

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 239 RQEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
           R   P P   P  + PR G +   G+P  P  P+ GG   GG
Sbjct: 203 RPGAPRPGASPGNMPPRPGGVGGPGRPARPGAPRPGGGRPGG 244

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>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
 Frame = +2

Query: 239 RQEPPLPDPHPRALGPRR----GDLPPAGQPLHPA--QPQHGGVPRGG 364
           R  PP P    R  GP +    G  PP G+P+ P   QP  GG P  G
Sbjct: 86  RPGPPPPAAMARPGGPPQVSQPGGFPPVGRPVAPPSNQPPFGGRPSTG 133

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>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQP 337
           PP P P P  L P    LPP   PL PA P
Sbjct: 647 PPTPPPLPPPLIPPPPPLPPGLGPLPPAPP 676

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQP---QHGGVPRGG 364
           P+P P P   G R+  +PP G P  P  P      G P GG
Sbjct: 765 PVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG 805

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +2

Query: 239 RQEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGG 349
           R +PP P P PR   P    LPP   P  P QP   G
Sbjct: 268 RDDPPPPSPPPRPPPP----LPPPPPPPPPPQPPPAG 300

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>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)|
          Length = 1468

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQP 337
           PP P P P  L P    LPP   PL PA P
Sbjct: 873 PPTPPPLPPPLIPPPPPLPPGLGPLPPAPP 902

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = +2

Query: 257 PDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
           P P P   GPR G  P  G    P   Q  G PR G
Sbjct: 199 PGPRPGGGGPRPGGGPRPGGAPRPQGGQRSGAPRDG 234

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>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor|
           (PRP-1/PRP-2) (Parotid proline-rich protein 1/2)
           (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa)
           (Parotid isoelectric focusing variant protein) (PIF-S)
           (Parotid double-band
          Length = 166

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 239 RQEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPR 358
           +Q PP P   P+   P++G  PP  Q      PQ GG PR
Sbjct: 81  QQGPPPPQGKPQG-PPQQGGHPPPPQGRPQGPPQQGGHPR 119

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLP----PAGQP------LHPAQPQH-GGVPRGG 364
           P P P P   GP+ G +P    P G P       HP  P   GG PRGG
Sbjct: 188 PGPKPGPGPGGPKGGKMPGGPKPGGGPGMGAPGGHPKPPHRGGGEPRGG 236

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>HES1_CHICK (O57337) Transcription factor HES-1 (C-HAIRY1)|
          Length = 290

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 302 PPAGQPLHPAQPQHGGVP 355
           PPAGQP H AQP H  +P
Sbjct: 160 PPAGQPAHLAQPLHVQLP 177

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>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 242  QEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQ 340
            Q+PP P P P+A   +     PAGQP    QPQ
Sbjct: 2485 QQPPPPVPQPQAASSQ----TPAGQPAVQPQPQ 2513

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>SETBP_HUMAN (Q9Y6X0) SET-binding protein (SEB)|
          Length = 1542

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = +2

Query: 239  RQEPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
            R+ PPLP P P         LPP   P  P  P     PRGG
Sbjct: 1463 REAPPLPPPPP-------PPLPPPPPPPLPPPPPLPKTPRGG 1497

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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +2

Query: 251  PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
            P+  P PR    R GD  P G P  P  P   G P GG
Sbjct: 1157 PIGPPGPRG---RTGDAGPVGPPGPPGPPGPPGPPSGG 1191

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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/76 (26%), Positives = 29/76 (38%)
 Frame = +3

Query: 135 PRPVFLVDYCCYKPSPSFRVPFTTFMEHIKLISNNDKSLRFQTRILERSGLGEETCLPPA 314
           P P  L+   C    PS R PFT   +H++ I          TR       G      P+
Sbjct: 283 PLPFLLLAIHCCNLEPSTRAPFTEITQHLEWILEQLPEPAPLTRTALTHNQGSVARGGPS 342

Query: 315 NHYIPPNPSMEASRAE 362
                P+P +  SR++
Sbjct: 343 ATLPRPDPRLSRSRSD 358

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>ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein 10 (Zinc|
           finger protein RIN ZF)
          Length = 836

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRG 361
           PL    PR  G RRG  P +G+     +P   G+PRG
Sbjct: 36  PLGHGRPRLAGRRRGGPPASGK-----EPSDSGLPRG 67

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>ADA2A_BOVIN (Q28838) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2D
           adrenergic receptor)
          Length = 452

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVP 355
           P   +  P  LGP RG + P G  +   Q Q  G P
Sbjct: 244 PGSAERRPNGLGPERGGVGPVGAEVESLQVQLNGAP 279

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>SECD_MYCTU (Q50634) Protein-export membrane protein secD|
          Length = 573

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 245 EPPLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPR 358
           E P P P      P +   PP  Q   PA PQ G  PR
Sbjct: 132 EEPQPAPSAEPQPPGQPAAPPPAQSGAPASPQPGAQPR 169

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>LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1|
          Length = 676

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 239 RQEPPLPDPHPR----ALGPRRGDLPPAGQPLHPAQPQHGGVPR 358
           R  P LP P+      A+GP +   P    PL  + P+ GG+PR
Sbjct: 270 RVSPGLPSPNLENGAPAVGPVQPRTPSVSAPLALSCPRQGGLPR 313

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>RW1_HUMAN (Q92545) RW1 protein (Fragment)|
          Length = 1805

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 245  EPPLPDPHPRALGPRRGDLPPAGQPL-HPAQPQHGGVPR 358
            +PPLP P P+   P+   L PA  PL HP+ P+     R
Sbjct: 1225 QPPLPPPVPQPQEPQPERLSPA--PLAHPSHPERASSAR 1261

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>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1|
            GTPase-activating protein (PIP2-dependent ARF1 GAP)
            (ADP-ribosylation factor-directed GTPase-activating
            protein 1) (ARF GTPase-activating protein 1) (Development
            and differe
          Length = 1129

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242  QEPPLPD--PHPRALGPRR--GDLPPAGQPLHPAQPQHGGVP 355
            Q+PP  D  P P  L P+   GDLPP    L P +PQ G +P
Sbjct: 938  QKPPPGDLPPKPTELAPKPPIGDLPPKPGEL-PPKPQLGDLP 978

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>LRC50_MOUSE (Q9D2H9) Leucine-rich repeat-containing protein 50|
          Length = 634

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
 Frame = +3

Query: 138 RPVFLVDYCC--------YKPSPSFRVPFTTFMEHIKLISNNDKSLRFQTRILERSGLGE 293
           RPVF  D  C        Y      R  + +  EH K+  + +     + R  ER    +
Sbjct: 275 RPVFPKDRACAEAWARGGYAAEKEERRQWES-REHKKITDSLEALAMIKRRAEERKKARD 333

Query: 294 --ETCLPPANHYIPPNPSMEASRAEAQLV---------IFNAIDDLVRRTGIKPKDIDIL 440
             ET LP +   IP +P  E  +   ++           F A D+L   T    K++ ++
Sbjct: 334 RGETPLPDSEGSIPTSPEAEEKQPMGEIQKKMELFVEESFEAKDELFPETPGGEKELHVV 393

Query: 441 VVNCSLFSP 467
           VVN ++ +P
Sbjct: 394 VVNGAVENP 402

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 251  PLPDPHPRALGPRRGDLPPAGQPLHPAQPQHGGVPRGG 364
            P+  P PR    R G++ P G P  P  P   G P GG
Sbjct: 1150 PIGPPGPRG---RTGEVGPVGPPGPPGPPGPPGPPSGG 1184

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>FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription factor winged-helix|
           nude) (Hepatocyte nuclear factor 3 forkhead homolog 11)
           (HNF-3/forkhead homolog 11) (HFH-11)
          Length = 648

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 257 PDPHPRALGPRRGDLPPAG--QPLHPAQPQHGGVP 355
           P P     GP R   P AG  QPLHP  P  G +P
Sbjct: 400 PPPGLAGPGPIRPMAPSAGLSQPLHPMHPAPGPMP 434

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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
 Frame = +2

Query: 266  HPRALGP-----RRGDLPPAGQPLHPAQPQHGGVPRGG 364
            HP A+GP       G   PAG P  P  P H G   GG
Sbjct: 1061 HPGAMGPVGPRGPAGFTGPAGPPGPPGPPGHAGPSGGG 1098

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>CLCN1_CANFA (Q9MZT1) Chloride channel protein, skeletal muscle (Chloride|
           channel protein 1) (ClC-1)
          Length = 976

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPAQPQ 340
           PPLP PHP    P   +      P H  QP+
Sbjct: 721 PPLPPPHPLPSAPLSSEESNGPLPSHKQQPE 751

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
 Frame = +2

Query: 251 PLPDPHPRALGPRRGDLPPAGQPLHPAQPQ------HGGVP 355
           P P P P A  P  G  PPA  P  PA P+      +GG+P
Sbjct: 761 PPPGPAPAAASP--GPPPPASPPGAPASPRAPRTSPYGGLP 799



 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +2

Query: 239 RQEPPLPDPH--PRALGPRRGDLPPAGQPLHPAQPQHGGVPRG 361
           +Q+PP P P   P   GP     PP  + L P     GG PRG
Sbjct: 32  QQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG-PRG 73

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>DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent|
           ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP)
           (ADP-ribosylation factor-directed GTPase-activating
           protein 1) (ARF GTPase-activating protein 1)
           (Development and differe
          Length = 956

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +2

Query: 242 QEPPLPD--PHPRALGPRR--GDLPPAGQPLHPAQPQHGGVP 355
           Q+PP  D  P P  L P+   GDLPP    L P +PQ G +P
Sbjct: 759 QKPPPGDLPPKPTELAPKPQIGDLPPKPGEL-PPKPQLGDLP 799

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>POLN_HEVPA (P33424) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
           polymerase/Helicase)
          Length = 1693

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 248 PPLPDPHPRALGPRRGDLPPAGQPLHPA 331
           PP PDP P    P RG+  P      PA
Sbjct: 742 PPAPDPSPTLSAPARGEPAPGATARAPA 769


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,577,683
Number of Sequences: 219361
Number of extensions: 721112
Number of successful extensions: 4409
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 3548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result