Clone Information

BLAST Search Result

Clone Name	bast64b07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PRGR_MOUSE (Q00175) Progesterone receptor (PR)	33	0.52
2	MDH_SALMU (Q59838) Malate dehydrogenase (EC 1.1.1.37) (Fragment)	32	1.2
3	MDH_ERWCT (Q6D9D1) Malate dehydrogenase (EC 1.1.1.37)	32	1.2
4	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	32	1.2
5	SSM4_YEAST (P40318) Protein SSM4	32	1.2
6	MDH_YERPS (P61893) Malate dehydrogenase (EC 1.1.1.37)	31	1.5
7	MDH_YERPE (P61892) Malate dehydrogenase (EC 1.1.1.37)	31	1.5
8	MDH_PASMU (Q9CN86) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
9	MDH_HAEIN (P44427) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
10	MDH_HAEI8 (Q4QL89) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
11	MDH_SHIFL (Q83Q04) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
12	MDH_ECOLI (P61889) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
13	MDH_ECOL6 (P61890) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
14	MDH_ECO57 (P61891) Malate dehydrogenase (EC 1.1.1.37)	31	2.0
15	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	31	2.0
16	PRGR_RAT (Q63449) Progesterone receptor (PR)	31	2.0
17	PRGR_SHEEP (Q28590) Progesterone receptor (PR) (Fragment)	31	2.0
18	BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (...	30	3.3
19	AROB_XANC5 (Q3BQS1) 3-dehydroquinate synthase (EC 4.2.3.4)	30	3.3
20	PRGR_HUMAN (P06401) Progesterone receptor (PR)	30	3.3
21	MDH_SALTY (P25077) Malate dehydrogenase (EC 1.1.1.37)	30	4.4
22	MDH_SALTI (Q8Z3E0) Malate dehydrogenase (EC 1.1.1.37)	30	4.4
23	MDH_SALPA (Q7WS85) Malate dehydrogenase (EC 1.1.1.37)	30	4.4
24	MDH_SALCH (Q57JA9) Malate dehydrogenase (EC 1.1.1.37)	30	4.4
25	VSP2_TRIJE (Q9DF67) Venom serine proteinase 2 precursor (EC 3.4....	30	4.4
26	CHS1_SECCE (P53414) Chalcone synthase 1 (EC 2.3.1.74) (Naringeni...	29	5.7
27	RS9_LISMO (Q8Y459) 30S ribosomal protein S9	29	7.5
28	RS9_LISMF (Q71WI2) 30S ribosomal protein S9	29	7.5
29	RS9_LISIN (Q927P3) 30S ribosomal protein S9	29	7.5
30	MDH_KLEVA (P61896) Malate dehydrogenase (EC 1.1.1.37) (Fragment)	29	7.5
31	PRGR_CHICK (P07812) Progesterone receptor (PR)	29	7.5
32	PRGR_RABIT (P06186) Progesterone receptor (PR)	29	7.5
33	GRB14_HUMAN (Q14449) Growth factor receptor-bound protein 14 (GR...	29	7.5
34	FURIN_HUMAN (P09958) Furin precursor (EC 3.4.21.75) (Paired basi...	28	9.7
35	MDH_KLEOX (P61894) Malate dehydrogenase (EC 1.1.1.37) (Fragment)	28	9.7
36	KLRBB_RAT (P27471) Natural killer cell surface protein P1-3.2.3 ...	28	9.7
37	GCS1_RAT (O88941) Mannosyl-oligosaccharide glucosidase (EC 3.2.1...	28	9.7
38	GCS1_MOUSE (Q80UM7) Mannosyl-oligosaccharide glucosidase (EC 3.2...	28	9.7
39	ATS1_HUMAN (Q9UHI8) ADAMTS-1 precursor (EC 3.4.24.-) (A disinteg...	28	9.7
40	GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose t...	28	9.7
41	MDH_KLETE (P61895) Malate dehydrogenase (EC 1.1.1.37) (Fragment)	28	9.7
42	FURIN_BOVIN (Q28193) Furin precursor (EC 3.4.21.75) (Paired basi...	28	9.7
43	CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor	28	9.7

>PRGR_MOUSE (Q00175) Progesterone receptor (PR)|
          Length = 923

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 23/81 (28%), Positives = 35/81 (43%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 566 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 622

Query: 232 LSTSRAKARFRLSRVVRTLTG 294
           +   R   +F   RV+RTL G
Sbjct: 623 VLGGRKFKKFNKVRVMRTLDG 643

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>MDH_SALMU (Q59838) Malate dehydrogenase (EC 1.1.1.37) (Fragment)|
          Length = 283

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G +D    C Y E D +           G  G
Sbjct: 206 KAGGGSATLSMGQAAARFGLS-LVRALQGEKD-VVECAYVEGDGQYARFFSQPLLLGKNG 263

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 264 VEERKSIGTLS 274

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>MDH_ERWCT (Q6D9D1) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 311

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G ++    C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-ENGVVECAYVESDGKHARFFAQPILLGKDG 274

Query: 355 INLNKDLMTIA 387
           +   KD+ T++
Sbjct: 275 VAERKDIGTLS 285

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 38/151 (25%), Positives = 54/151 (35%), Gaps = 8/151 (5%)
 Frame = -3

Query: 479 ARNEGSANSSCSDAGRTSGPIAVMFAFSASPAMVIRSL--------FRLMPRCPSSSSSW 324
           A    S++SS + A  + G   +  + SAS ++  RSL         R   +   S   W
Sbjct: 135 AAASSSSSSSAAAASHSPGAAGLPASCSASASLCTRSLDRKTLLLKHRQTLQLQPSDRDW 194

Query: 323 YTHQYALSCAPVSVRTTRDSRKRALARDVDSSAAAPPMRKRQLGSSMARSLPT**LGVMV 144
             HQ    C  V  R    +  R +   +D++A     R  QLG            G +V
Sbjct: 195 VRHQLQRGCVHVFDRHMASTYLRPVLCTLDTTAGEVAARLLQLGHKG---------GGVV 245

Query: 143 SVDTTSACEPRGATCRKLRASPTEMSPALHP 51
            V       P  A  R+    P E  P L P
Sbjct: 246 KV---LGQGPGAAAAREPAEPPPEAGPRLAP 273

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>SSM4_YEAST (P40318) Protein SSM4|
          Length = 1319

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 116 PRGATCRKLRASPTEMSPALHPIPERCTLRTSLRILY 6
           P GATCR  R   TE +P  HP    C  R S++ ++
Sbjct: 34  PSGATCRICRGEATEDNPLFHP----CKCRGSIKYMH 66

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>MDH_YERPS (P61893) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEED 336
           + GG +A LS  +A ARF LS +VR L G + N   C Y E D
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-ESNVVECSYVEGD 257

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>MDH_YERPE (P61892) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEED 336
           + GG +A LS  +A ARF LS +VR L G + N   C Y E D
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-ESNVVECSYVEGD 257

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>MDH_PASMU (Q9CN86) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 311

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEED 336
           + GG +A LS ++A ARF LS +V+ L G  +N   C Y E D
Sbjct: 217 KAGGGSATLSMAQAAARFALS-LVKGLNG--ENVVECTYVEGD 256

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>MDH_HAEIN (P44427) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 311

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 31/91 (34%), Positives = 43/91 (47%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEEGHRGINLNKDLMTIA 387
           + GG +A LS ++A ARF  S +V+ L+G  +    C Y E D +  R  +    L    
Sbjct: 217 KAGGGSATLSMAQAAARFARS-LVKGLSG--ETVVECTYVEGDGKYARFFSQPVRL---- 269

Query: 388 GDALKANITAIGPLVLPASEQLLFALPSLRA 480
           G      I  IGPL     + L   LP+LRA
Sbjct: 270 GKEGVEEILPIGPLSNFEQQALENMLPTLRA 300

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>MDH_HAEI8 (Q4QL89) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 311

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 31/91 (34%), Positives = 43/91 (47%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEEGHRGINLNKDLMTIA 387
           + GG +A LS ++A ARF  S +V+ L+G  +    C Y E D +  R  +    L    
Sbjct: 217 KAGGGSATLSMAQAAARFARS-LVKGLSG--ETVVECTYVEGDGKYARFFSQPVRL---- 269

Query: 388 GDALKANITAIGPLVLPASEQLLFALPSLRA 480
           G      I  IGPL     + L   LP+LRA
Sbjct: 270 GKEGVEEILPIGPLSNFEQQALENMLPTLRA 300

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>MDH_SHIFL (Q83Q04) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G Q     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQGEQ-GVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_ECOLI (P61889) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G Q     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQGEQ-GVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_ECOL6 (P61890) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G Q     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQGEQ-GVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_ECO57 (P61891) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G Q     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQGEQ-GVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 582 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 638

Query: 232 LSTSRAKARFRLSRVVRTL 288
           +   R   +F   RV+RTL
Sbjct: 639 VLGGRKFKKFNKVRVMRTL 657

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>PRGR_RAT (Q63449) Progesterone receptor (PR)|
          Length = 923

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 566 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 622

Query: 232 LSTSRAKARFRLSRVVRTLTG 294
           +   R   +F   RV+R L G
Sbjct: 623 VLGGRKFKKFNKVRVMRALDG 643

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>PRGR_SHEEP (Q28590) Progesterone receptor (PR) (Fragment)|
          Length = 377

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 27  GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 83

Query: 232 LSTSRAKARFRLSRVVRTL 288
           +   R   +F   RV+RTL
Sbjct: 84  VLGGRKFKKFNKVRVMRTL 102

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>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
 Frame = +3

Query: 3   QVQDAQRRPQRA--PLRDGVQRGAHLCGARAQLPXXXXXXXXXXXXVHGDHHAQLLRRQG 176
           + + A   PQR+  PLR G+   A       Q+P             HG   +Q      
Sbjct: 125 RTEAAAATPQRSQSPLRGGMTEAAQTDKQCGQMPATATTAAAQPPTAHGPERSQSPAASD 184

Query: 177 ARHAAAQLPLPHGRRGGAAVHVPRQGTLP 263
              +++   LP   R     H   +G +P
Sbjct: 185 CSSSSSSASLPSSGRSSLGSHQLPRGYIP 213

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>AROB_XANC5 (Q3BQS1) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 370

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 28  RNVHLSGMGCSAGLISVGLARNFLQVAP--RGSHALVVSTETITPNYYVGKERAML 189
           R+V L G+      I+ GL  +  ++A   RG HAL++S   + P+Y  G   A+L
Sbjct: 8   RSVDLDGVQPYTITIAPGLLADGARLAGHVRGRHALLLSDSQVAPHYAAGVRTALL 63

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>PRGR_HUMAN (P06401) Progesterone receptor (PR)|
          Length = 933

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 576 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 632

Query: 232 LSTSRAKARFRLSRVVRTL 288
           +   R   +F   RVVR L
Sbjct: 633 VLGGRKFKKFNKVRVVRAL 651

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>MDH_SALTY (P25077) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G +     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-EKGVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_SALTI (Q8Z3E0) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G +     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-EKGVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_SALPA (Q7WS85) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G +     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-EKGVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>MDH_SALCH (Q57JA9) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 312

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEE-----------GHRG 354
           + GG +A LS  +A ARF LS +VR L G +     C Y E D +           G  G
Sbjct: 217 KAGGGSATLSMGQAAARFGLS-LVRALQG-EKGVVECAYVEGDGQYARFFSQPLLLGKNG 274

Query: 355 INLNKDLMTIA 387
           +   K + T++
Sbjct: 275 VEERKSIGTLS 285

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>VSP2_TRIJE (Q9DF67) Venom serine proteinase 2 precursor (EC 3.4.21.-) (SP2)|
          Length = 258

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +1

Query: 310 YWCVYQEEDEEGHRGINLNKDLMTIAGDALKANITAIGPLVLPAS 444
           ++C  ++ D+E      ++KD+M I  D+  +N T I PL LP+S
Sbjct: 96  FFCPNRKNDDE------VDKDIMLIKLDSSVSNSTHIAPLSLPSS 134

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>CHS1_SECCE (P53414) Chalcone synthase 1 (EC 2.3.1.74) (Naringenin-chalcone|
           synthase 1)
          Length = 392

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +1

Query: 13  MRSDVRNVHLSGMGCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLL 192
           +R  V+ + +   GC AG   + LA++  +   RG+  LVV +E     +    E   L+
Sbjct: 153 LRPSVKRLMMYQQGCFAGGTVLRLAKDLAE-NNRGARVLVVCSEITAVTFRGPHEFDSLV 211

Query: 193 PNCLFRMGGAAALL 234
              LF  G AA ++
Sbjct: 212 GQALFGDGAAAVIV 225

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>RS9_LISMO (Q8Y459) 30S ribosomal protein S9|
          Length = 130

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = +1

Query: 31  NVHLSGMGCSAGLISVGLARNFLQVAPRGSHAL 129
           NVH  G    AG I  G+AR  LQVAP    AL
Sbjct: 66  NVHGGGYTGQAGAIRHGVARALLQVAPEYRPAL 98

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>RS9_LISMF (Q71WI2) 30S ribosomal protein S9|
          Length = 130

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = +1

Query: 31  NVHLSGMGCSAGLISVGLARNFLQVAPRGSHAL 129
           NVH  G    AG I  G+AR  LQVAP    AL
Sbjct: 66  NVHGGGYTGQAGAIRHGVARALLQVAPEYRPAL 98

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>RS9_LISIN (Q927P3) 30S ribosomal protein S9|
          Length = 130

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = +1

Query: 31  NVHLSGMGCSAGLISVGLARNFLQVAPRGSHAL 129
           NVH  G    AG I  G+AR  LQVAP    AL
Sbjct: 66  NVHGGGYTGQAGAIRHGVARALLQVAPEYRPAL 98

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>MDH_KLEVA (P61896) Malate dehydrogenase (EC 1.1.1.37) (Fragment)|
          Length = 232

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEEDEEGH 348
           + GG +A LS  +A ARF LS +VR + G +     C Y E D  GH
Sbjct: 187 KAGGGSATLSMGQAAARFGLS-LVRAMQG-EKGVVECAYVEGD--GH 229

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>PRGR_CHICK (P07812) Progesterone receptor (PR)|
          Length = 786

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 430 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 486

Query: 232 LSTSRAKARFRLSRVVRTL 288
           +   R   +    +VVRTL
Sbjct: 487 VLGGRKFKKLNKMKVVRTL 505

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>PRGR_RABIT (P06186) Progesterone receptor (PR)|
          Length = 930

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = +1

Query: 52  GCSAGLISVGLARNFLQVAPRGSHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAAL 231
           GC  G+++ G  + F + A  G H  + +      +  V K R    P C  R    A +
Sbjct: 577 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN---DCIVDKIRRKNCPACRLRKCCQAGM 633

Query: 232 LSTSRAKARFRLSRVVRTL 288
           +   R   +F   RV+R L
Sbjct: 634 VLGGRKFKKFNKVRVMRAL 652

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>GRB14_HUMAN (Q14449) Growth factor receptor-bound protein 14 (GRB14 adapter|
           protein)
          Length = 540

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
 Frame = +3

Query: 6   VQDAQRRPQRAPLRDGVQRGAHLCGARAQLPXXXXXXXXXXXXVHGDHHAQLLRRQGARH 185
           +QD Q    RA  RD     A +CGA                   GD H   L      H
Sbjct: 5   LQDGQSAASRAAARDS-PLAAQVCGAAQG---------------RGDAHD--LAPAPWLH 46

Query: 186 AAAQLPLPHGRRGGAA-------VHVPRQGTLP 263
           A A LPLP G RG AA       + VP   ++P
Sbjct: 47  ARALLPLPDGTRGCAADRRKKKDLDVPEMPSIP 79

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>FURIN_HUMAN (P09958) Furin precursor (EC 3.4.21.75) (Paired basic amino acid|
           residue cleaving enzyme) (PACE) (Dibasic-processing
           enzyme)
          Length = 794

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = +3

Query: 183 HAAAQLPLPHGRRGGAAVHV-----PRQGTLPAVPRGAHADG 293
           HA A+L L + RRG  A+H+      R   L A P    ADG
Sbjct: 486 HAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADG 527

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>MDH_KLEOX (P61894) Malate dehydrogenase (EC 1.1.1.37) (Fragment)|
          Length = 223

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEED 336
           + GG +A LS  +A ARF LS +VR + G +     C Y E D
Sbjct: 182 KAGGGSATLSMGQAAARFGLS-LVRAMQG-EKGVVECAYVEGD 222

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>KLRBB_RAT (P27471) Natural killer cell surface protein P1-3.2.3 (NKR-P1|
           3.2.3) (Antigen 3.2.3)
          Length = 223

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 217 GAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWC----VYQEEDEEGHRGINLNKDLMTI 384
           GA  LL   + + RF     +R LT    +++W        +E+ +   G  LN D+++I
Sbjct: 126 GATLLLVQDQEELRF-----LRNLTKRISSSFWIGLSYTLSDENWKWINGSTLNSDVLSI 180

Query: 385 AGDALKANITAI 420
            GD  K +  ++
Sbjct: 181 TGDTEKDSCASV 192

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>GCS1_RAT (O88941) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)|
           (Glycoprotein-processing glucosidase I)
          Length = 834

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 204 EAVGQQHGALLADVVVGRDGLRGHHQRVRAPWRHLQEVAREPHRDEP 64
           EA+G   G L AD  +GR+ + G   R R P   L  V R  H + P
Sbjct: 466 EALGHWLGLLNADGWIGREQILGDEARARVPPEFL--VQRAAHANPP 510

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>GCS1_MOUSE (Q80UM7) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)|
           (Glycoprotein-processing glucosidase I) (Glucosidase 1)
          Length = 834

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 204 EAVGQQHGALLADVVVGRDGLRGHHQRVRAPWRHLQEVAREPHRDEP 64
           EA+G   G L AD  +GR+ + G   R R P   L  V R  H + P
Sbjct: 466 EALGHWLGLLNADGWIGREQILGDEARARVPPEFL--VQRAAHANPP 510

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>ATS1_HUMAN (Q9UHI8) ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 1) (ADAM-TS
           1) (ADAM-TS1) (METH-1)
          Length = 967

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 137 DTTSACEPRGATCRKLRASPTEMSPALHPIPERCTLRTSLRI 12
           D    C   G+TC+K+  S T   P  H I    T  T++ +
Sbjct: 712 DKCGVCGGNGSTCKKISGSVTSAKPGYHDIITIPTGATNIEV 753

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>GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 163 YVGKERAMLLPNCLFRMGGAAALLSTSRAKARFRLSRVVRTLTGA 297
           ++G++RAML  N L  +GG  AL+  + A A + +  + R L GA
Sbjct: 105 WLGRKRAMLANNVLAVLGG--ALMGLANAAASYEILILGRFLIGA 147

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>MDH_KLETE (P61895) Malate dehydrogenase (EC 1.1.1.37) (Fragment)|
          Length = 225

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +1

Query: 208 RMGGAAALLSTSRAKARFRLSRVVRTLTGAQDNAYWCVYQEED 336
           + GG +A LS  +A ARF LS +VR + G +     C Y E D
Sbjct: 184 KAGGGSATLSMGQAAARFGLS-LVRAMQG-EKGVVECAYVEGD 224

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>FURIN_BOVIN (Q28193) Furin precursor (EC 3.4.21.75) (Paired basic amino acid|
           residue-cleaving enzyme) (PACE) (Dibasic-processing
           enzyme) (Trans Golgi network protease furin)
          Length = 797

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = +3

Query: 183 HAAAQLPLPHGRRGGAAVHV-----PRQGTLPAVPRGAHADG 293
           HA A+L L + RRG  A+H+      R   L A P    ADG
Sbjct: 486 HAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADG 527

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>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor|
          Length = 920

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 286 LTGAQDNAYWCVYQEEDEEGHR--GINLNKDLMTI 384
           +TGA    YW ++Q +D  G    G+NLN  + ++
Sbjct: 119 MTGATLQKYWTIWQIQDSSGKEQVGVNLNGPMKSV 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,878,399
Number of Sequences: 219361
Number of extensions: 962195
Number of successful extensions: 4063
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4055
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result