| Clone Name | bast64b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103761.1| Zea mays PCO149839 mRNA sequence Length = 693 Score = 137 bits (69), Expect = 4e-29 Identities = 141/165 (85%) Strand = Plus / Plus Query: 328 gaggtagactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgac 387 ||||| ||||||||| || |||||||||||| ||||| ||| | ||||||||||||| Sbjct: 368 gaggtggactgggagtccacctacttcatccagcaccaccccaagaccaacgtcgccgac 427 Query: 388 ttcccggagatcccgccggccacacgagagatgctcgacgtgtacatcggacagatggtg 447 ||||| |||||| ||||| | |||||||||| ||| |||| |||| ||| ||||||||| Sbjct: 428 ttcccagagatcacgccgccgacacgagagacgctggacgcgtacgtcgcgcagatggtg 487 Query: 448 tcgctcgcagagcggctggccgagtgcatgagcctgaacctgggc 492 || ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 488 tccctcgcggagcgtctggccgagtgcatgagcctcaacctgggc 532 Score = 115 bits (58), Expect = 1e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 138 gctccacggagcctgcaaggactggggcttcttctgggtggacagccatggcgtcgacgc 197 |||||||| |||||||||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct: 172 gctccacgacgcctgcaaggactggggcttcttctgggtggagaaccacggcgtggacgc 231 Query: 198 cgcgctgatggaggaggtgaagcgcttcgtgtatgcccactacgacgagcatctcaagga 257 |||||||||| ||||| ||||||||||| || | ||||||||| ||||| || ||| Sbjct: 232 gccgctgatggacgaggtcaagcgcttcgtctacggccactacgaggagcacctggaggc 291 Query: 258 taggttctacgcctcggacctcgcca 283 | |||||||||||| | |||||||| Sbjct: 292 caagttctacgcctccgccctcgcca 317
>ref|NM_192999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 127 accatggcgcggctccacggagcctgcaaggactggggcttcttctgggtggacagccat 186 |||||||| | |||||||| ||||| |||||||||||||||||||||||||| | |||| Sbjct: 61 accatggcccagctccacgaggcctgtaaggactggggcttcttctgggtggaaaaccat 120 Query: 187 ggcgtcgacgccgcgctgatggaggaggtgaagcgcttcgtgtatgcccactacgacgag 246 ||||| || || ||| | ||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 121 ggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccgccattacgacgag 180 Query: 247 catctcaaggataggttctacgcctcggacctcgccaa 284 || || || | | ||||||||||| ||||||||||| Sbjct: 181 cacctggagaagaaattctacgcctccgacctcgccaa 218 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||| Sbjct: 286 gactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccg 345 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 346 gacatcccgccggc 359
>dbj|AK102472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H01, full insert sequence Length = 1183 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 127 accatggcgcggctccacggagcctgcaaggactggggcttcttctgggtggacagccat 186 |||||||| | |||||||| ||||| |||||||||||||||||||||||||| | |||| Sbjct: 183 accatggcccagctccacgaggcctgtaaggactggggcttcttctgggtggaaaaccat 242 Query: 187 ggcgtcgacgccgcgctgatggaggaggtgaagcgcttcgtgtatgcccactacgacgag 246 ||||| || || ||| | ||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 243 ggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccgccattacgacgag 302 Query: 247 catctcaaggataggttctacgcctcggacctcgccaa 284 || || || | | ||||||||||| ||||||||||| Sbjct: 303 cacctggagaagaaattctacgcctccgacctcgccaa 340 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||| Sbjct: 408 gactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccg 467 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 468 gacatcccgccggc 481
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||| ||| |||||| ||| ||||||| ||||||||||||| Sbjct: 68384 gactgggaggccacctacttcgtccagcaccgccccaagaacaacgccgccgacttcccg 68325 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 68324 gacatcccgccggc 68311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||||||||||||||||||| || | | |||||||||||| ||||||||||| Sbjct: 69239 ccactacgacgagcatctcgagaacaagttctacgcctccgacctcgccaa 69189
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||| ||| |||||| ||| ||||||| ||||||||||||| Sbjct: 20646344 gactgggaggccacctacttcgtccagcaccgccccaagaacaacgccgccgacttcccg 20646285 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 20646284 gacatcccgccggc 20646271 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||||||||||||||||||| || | | |||||||||||| ||||||||||| Sbjct: 20647199 ccactacgacgagcatctcgagaacaagttctacgcctccgacctcgccaa 20647149
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||| Sbjct: 22486302 gactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccg 22486361 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 22486362 gacatcccgccggc 22486375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcgacgccgcgctgatggaggaggtgaagcgcttcgtgtatgc 233 |||||| | ||||||||| || || ||| | ||||||||||||||| |||||||||| Sbjct: 22486124 ggtggaaaaccatggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccg 22486183 Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||| ||||||||||| || || | | ||||||||||| ||||||||||| Sbjct: 22486184 ccattacgacgagcacctggagaagaaattctacgcctccgacctcgccaa 22486234 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 127 accatggcgcggctccacggagcctgcaaggactggggcttcttctgggt 176 |||||||| | |||||||| ||||| ||||||||||||||||||||||| Sbjct: 22485788 accatggcccagctccacgaggcctgtaaggactggggcttcttctgggt 22485837 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 gcctgcaaggactggggcttcttc 171 |||||| ||||||||||||||||| Sbjct: 14085115 gcctgccaggactggggcttcttc 14085138
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||| Sbjct: 2039 gactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccg 2098 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 2099 gacatcccgccggc 2112 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcgacgccgcgctgatggaggaggtgaagcgcttcgtgtatgc 233 |||||| | ||||||||| || || ||| | ||||||||||||||| |||||||||| Sbjct: 1861 ggtggaaaaccatggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccg 1920 Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||| ||||||||||| || || | | ||||||||||| ||||||||||| Sbjct: 1921 ccattacgacgagcacctggagaagaaattctacgcctccgacctcgccaa 1971 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 127 accatggcgcggctccacggagcctgcaaggactggggcttcttctgggt 176 |||||||| | |||||||| ||||| ||||||||||||||||||||||| Sbjct: 1525 accatggcccagctccacgaggcctgtaaggactggggcttcttctgggt 1574
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 334 gactgggagaccgcctacttcatccggcaccgtcccgccaacaacgtcgccgacttcccg 393 ||||||||| || |||||||||||| |||||| ||| |||| || ||||||||||||| Sbjct: 110440 gactgggaggccacctacttcatccagcaccgccccaagaacaccgccgccgacttcccg 110499 Query: 394 gagatcccgccggc 407 || ||||||||||| Sbjct: 110500 gacatcccgccggc 110513 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcgacgccgcgctgatggaggaggtgaagcgcttcgtgtatgc 233 |||||| | ||||||||| || || ||| | ||||||||||||||| |||||||||| Sbjct: 110262 ggtggaaaaccatggcgtggaggcggcgttaatggaggaggtgaagagcttcgtgtaccg 110321 Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||| ||||||||||| || || | | ||||||||||| ||||||||||| Sbjct: 110322 ccattacgacgagcacctggagaagaaattctacgcctccgacctcgccaa 110372 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 127 accatggcgcggctccacggagcctgcaaggactggggcttcttctgggt 176 |||||||| | |||||||| ||||| ||||||||||||||||||||||| Sbjct: 109926 accatggcccagctccacgaggcctgtaaggactggggcttcttctgggt 109975
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||||||||||||||||||| || | | |||||||||||| ||||||||||| Sbjct: 20475482 ccactacgacgagcatctcgagaacaagttctacgcctccgacctcgccaa 20475432
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 234 ccactacgacgagcatctcaaggataggttctacgcctcggacctcgccaa 284 ||||||||||||||||||| || | | |||||||||||| ||||||||||| Sbjct: 106112 ccactacgacgagcatctcgagaacaagttctacgcctccgacctcgccaa 106062
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 450 gctcgcagagcggctggccgag 471 |||||||||||||||||||||| Sbjct: 394239 gctcgcagagcggctggccgag 394218 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cgccgcgctgatggaggagg 214 |||||||||||||||||||| Sbjct: 1570571 cgccgcgctgatggaggagg 1570590
>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence Length = 184772 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 gggcttcttctgggtggacag 182 ||||||||||||||||||||| Sbjct: 115548 gggcttcttctgggtggacag 115528
>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome Length = 63882 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tggcgtcgacgccgcgctgat 206 ||||||||||||||||||||| Sbjct: 5245 tggcgtcgacgccgcgctgat 5265
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gtcgccgacttcccggagatc 399 ||||||||||||||||||||| Sbjct: 121654 gtcgccgacttcccggagatc 121634
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 gcgcttcgtgtatgcccactacgacgagc 247 |||||||||| ||||| |||||||||||| Sbjct: 1145380 gcgcttcgtgcatgccaactacgacgagc 1145408
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 cagagcaagcgatcggtacca 56 ||||||||||||||||||||| Sbjct: 2607313 cagagcaagcgatcggtacca 2607333
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence Length = 172914 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 tctccggtgaggtagactggg 340 ||||||||||||||||||||| Sbjct: 33669 tctccggtgaggtagactggg 33689
>emb|AJ339750.1|HSA339750 Homo sapiens genomic sequence surrounding NotI site, clone NR1-EJ8R Length = 693 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 cgccaaagacctgctgctgcc 299 ||||||||||||||||||||| Sbjct: 592 cgccaaagacctgctgctgcc 572
>dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1303B4 Length = 173872 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 tctccggtgaggtagactggg 340 ||||||||||||||||||||| Sbjct: 83026 tctccggtgaggtagactggg 83006
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 cgccgcgctgatggaggaggtgaag 219 ||||||||||||||||||| ||||| Sbjct: 240289 cgccgcgctgatggaggagctgaag 240265
>ref|NM_188968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gttctacgcctcggacctcgccaa 284 |||||||||||| ||||||||||| Sbjct: 510 gttctacgcctccgacctcgccaa 533
>gb|AY585706.1| Cyprinus carpio coilin p80 mRNA, partial cds Length = 287 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 agcctgcaaggactggggct 166 |||||||||||||||||||| Sbjct: 127 agcctgcaaggactggggct 146
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 aggaatccaaagccgtctcc 324 |||||||||||||||||||| Sbjct: 2425130 aggaatccaaagccgtctcc 2425149
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgtcgacgccgcgctgatgg 208 |||||||||||||||||||| Sbjct: 79206 cgtcgacgccgcgctgatgg 79187
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 ctacttcatccggcaccgtcccgc 371 ||||||||||| |||||||||||| Sbjct: 342616 ctacttcatcctgcaccgtcccgc 342639
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cctcgccaaagacctgctgc 295 |||||||||||||||||||| Sbjct: 870558 cctcgccaaagacctgctgc 870539
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgtcgacgccgcgctgatgg 208 |||||||||||||||||||| Sbjct: 21265732 cgtcgacgccgcgctgatgg 21265713
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcg 193 |||||||||||||||||||| Sbjct: 24920747 ggtggacagccatggcgtcg 24920766 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgtcgacgccgcgctgatgg 208 |||||||||||||||||||| Sbjct: 11388560 cgtcgacgccgcgctgatgg 11388541
>ref|XM_222251.3| PREDICTED: Rattus norvegicus E1A binding protein p400 (predicted) (Ep400_predicted), mRNA Length = 11061 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 gccgcgctgatggaggaggtgaag 219 |||| ||||||||||||||||||| Sbjct: 4882 gccgggctgatggaggaggtgaag 4859
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcg 193 |||||||||||||||||||| Sbjct: 15302 ggtggacagccatggcgtcg 15321
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgtcgacgccgcgctgatgg 208 |||||||||||||||||||| Sbjct: 76269 cgtcgacgccgcgctgatgg 76250
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 gcctgcaaggactggggcttcttc 171 |||||| ||||||||||||||||| Sbjct: 24829 gcctgccaggactggggcttcttc 24852
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggtggacagccatggcgtcg 193 |||||||||||||||||||| Sbjct: 131830 ggtggacagccatggcgtcg 131849
>dbj|AK072222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165K20, full insert sequence Length = 1405 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 gcctgcaaggactggggcttcttc 171 |||||| ||||||||||||||||| Sbjct: 244 gcctgccaggactggggcttcttc 267
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cctcgccaaagacctgctgc 295 |||||||||||||||||||| Sbjct: 2074306 cctcgccaaagacctgctgc 2074325 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,976,687 Number of Sequences: 3902068 Number of extensions: 2976687 Number of successful extensions: 62613 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62132 Number of HSP's gapped (non-prelim): 474 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)