| Clone Name | bast64b05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AXN2_MOUSE (O88566) Axin-2 (Axis inhibition protein 2) (Conducti... | 32 | 1.2 | 2 | RDRP_YOMV (Q66220) RNA-directed RNA polymerase (EC 2.7.7.48) (18... | 29 | 7.9 |
|---|
>AXN2_MOUSE (O88566) Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like| protein) (Axil) Length = 840 Score = 31.6 bits (70), Expect = 1.2 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = -1 Query: 426 LPRMXSQCREQGIKIDGRESGLAAAGGGEQVEERAGEQRSD 304 LP+ ++ E G+ + R+ G+++A GG Q+ G++ D Sbjct: 576 LPKRNAKGTEPGLALSARDGGMSSAAGGPQLPGEEGDRSQD 616
>RDRP_YOMV (Q66220) RNA-directed RNA polymerase (EC 2.7.7.48) (182 kDa protein)| [Contains: Methyltransferase/RNA helicase (MT/HEL) (125 kDa protein)] Length = 1597 Score = 28.9 bits (63), Expect = 7.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -1 Query: 471 PLEIVSNAPHFVLLALPRMXSQCREQGIKID 379 PLEI+S A VL+AL R ++C+ + +D Sbjct: 1046 PLEIISRASPHVLVALTRHTTRCKYYTVVLD 1076 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,674,129 Number of Sequences: 219361 Number of extensions: 425354 Number of successful extensions: 1410 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1409 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)