ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 190 bits (96), Expect = 3e-45 Identities = 370/460 (80%), Gaps = 6/460 (1%) Strand = Plus / Plus Query: 22 tcgtgcttttcacatggctggtcaggggccaccttcacccaatgacacagttcgcccacc 81 ||||||| | ||||||| ||||| |||| ||||| ||||| ||||| ||| ||||| | | Sbjct: 14 tcgtgctgtacacatggatggtccgggggcacctccaccccatgacgcagctcgccgatc 73 Query: 82 acctcgctagacatggcgttcctgtcaccgtcgccgtcgccgacgtcccgtctacaggca 141 | |||| | |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 74 gcatcgccaaccatggcgtccccgtcacggtcgccgtcgccgacgttccgtcgtcaggcg 133 Query: 142 agtcctctgagaccatcgccggcctcgccgcatcctatccttctgtctcgttccacctaa 201 ||||| | ||||| | ||| ||||| |||| | ||| ||||| ||||| ||||| || Sbjct: 134 agtcccgtaagaccgttgcccgcctctccgcctactacccttccgtctccttccagctgc 193 Query: 202 tcccgccggcagc---gacccgttccg---ccgagacggcagaccccgacgccgatcctt 255 | || ||||| || | ||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 194 taccaccggcggcaccggcccgttccggcgccgacacggccgaccctgacgctgacccct 253 Query: 256 tcatcgcccttatcgccgacctccgcgccgccaaccccgccctcctcgccttcctgaggt 315 ||||| |||| ||||||||||||||||| ||||| |||| ||| ||||||| | | | Sbjct: 254 tcatcaccctcctcgccgacctccgcgccaccaacgccgcgctcaccgccttcgtccgct 313 Query: 316 ccctcccgtccgtcaaggctctagtcaccgacttgttctgtgcctacgggttggacgccg 375 ||||||||||||| |||| || |||| |||||| |||||||| || ||| | ||||||| Sbjct: 314 ccctcccgtccgtggaggccctcgtcatcgacttcttctgtgcgtatgggctcgacgccg 373 Query: 376 ccgcagagctcggcgtcccggcctaccttttcttcacctcggctgcgtcggtccttgctg 435 |||| ||||||||||||||||||||||| |||||| ||| || |||| ||||||| Sbjct: 374 ccgcggagctcggcgtcccggcctacctgttcttcgtctcctgcgcttcggcccttgctt 433 Query: 436 cctacctgcacatccccgtcatgcgctccgctgtctcctt 475 ||||||||||||||||||||||||| ||||| || ||||| Sbjct: 434 cctacctgcacatccccgtcatgcgatccgccgtgtcctt 473
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 3e-45 Identities = 370/460 (80%), Gaps = 6/460 (1%) Strand = Plus / Minus Query: 22 tcgtgcttttcacatggctggtcaggggccaccttcacccaatgacacagttcgcccacc 81 ||||||| | ||||||| ||||| |||| ||||| ||||| ||||| ||| ||||| | | Sbjct: 30684672 tcgtgctgtacacatggatggtccgggggcacctccaccccatgacgcagctcgccgatc 30684613 Query: 82 acctcgctagacatggcgttcctgtcaccgtcgccgtcgccgacgtcccgtctacaggca 141 | |||| | |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 30684612 gcatcgccaaccatggcgtccccgtcacggtcgccgtcgccgacgttccgtcgtcaggcg 30684553 Query: 142 agtcctctgagaccatcgccggcctcgccgcatcctatccttctgtctcgttccacctaa 201 ||||| | ||||| | ||| ||||| |||| | ||| ||||| ||||| ||||| || Sbjct: 30684552 agtcccgtaagaccgttgcccgcctctccgcctactacccttccgtctccttccagctgc 30684493 Query: 202 tcccgccggcagc---gacccgttccg---ccgagacggcagaccccgacgccgatcctt 255 | || ||||| || | ||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 30684492 taccaccggcggcaccggcccgttccggcgccgacacggccgaccctgacgctgacccct 30684433 Query: 256 tcatcgcccttatcgccgacctccgcgccgccaaccccgccctcctcgccttcctgaggt 315 ||||| |||| ||||||||||||||||| ||||| |||| ||| ||||||| | | | Sbjct: 30684432 tcatcaccctcctcgccgacctccgcgccaccaacgccgcgctcaccgccttcgtccgct 30684373 Query: 316 ccctcccgtccgtcaaggctctagtcaccgacttgttctgtgcctacgggttggacgccg 375 ||||||||||||| |||| || |||| |||||| |||||||| || ||| | ||||||| Sbjct: 30684372 ccctcccgtccgtggaggccctcgtcatcgacttcttctgtgcgtatgggctcgacgccg 30684313 Query: 376 ccgcagagctcggcgtcccggcctaccttttcttcacctcggctgcgtcggtccttgctg 435 |||| ||||||||||||||||||||||| |||||| ||| || |||| ||||||| Sbjct: 30684312 ccgcggagctcggcgtcccggcctacctgttcttcgtctcctgcgcttcggcccttgctt 30684253 Query: 436 cctacctgcacatccccgtcatgcgctccgctgtctcctt 475 ||||||||||||||||||||||||| ||||| || ||||| Sbjct: 30684252 cctacctgcacatccccgtcatgcgatccgccgtgtcctt 30684213 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 30689517 gacgtcgccgccgagctcgccgtcccggcctac 30689485 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 367 tggacgccgccgcagagctcggcgtcccg 395 ||||||||||||| |||| |||||||||| Sbjct: 23452678 tggacgccgccgccgagcacggcgtcccg 23452706 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 8545500 cgccgacctccgcgccgcccacctcgccc 8545472 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 25592662 ggacgccgccgccgagcacggcgtcccg 25592689
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 190 bits (96), Expect = 3e-45 Identities = 370/460 (80%), Gaps = 6/460 (1%) Strand = Plus / Minus Query: 22 tcgtgcttttcacatggctggtcaggggccaccttcacccaatgacacagttcgcccacc 81 ||||||| | ||||||| ||||| |||| ||||| ||||| ||||| ||| ||||| | | Sbjct: 126949 tcgtgctgtacacatggatggtccgggggcacctccaccccatgacgcagctcgccgatc 126890 Query: 82 acctcgctagacatggcgttcctgtcaccgtcgccgtcgccgacgtcccgtctacaggca 141 | |||| | |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 126889 gcatcgccaaccatggcgtccccgtcacggtcgccgtcgccgacgttccgtcgtcaggcg 126830 Query: 142 agtcctctgagaccatcgccggcctcgccgcatcctatccttctgtctcgttccacctaa 201 ||||| | ||||| | ||| ||||| |||| | ||| ||||| ||||| ||||| || Sbjct: 126829 agtcccgtaagaccgttgcccgcctctccgcctactacccttccgtctccttccagctgc 126770 Query: 202 tcccgccggcagc---gacccgttccg---ccgagacggcagaccccgacgccgatcctt 255 | || ||||| || | ||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 126769 taccaccggcggcaccggcccgttccggcgccgacacggccgaccctgacgctgacccct 126710 Query: 256 tcatcgcccttatcgccgacctccgcgccgccaaccccgccctcctcgccttcctgaggt 315 ||||| |||| ||||||||||||||||| ||||| |||| ||| ||||||| | | | Sbjct: 126709 tcatcaccctcctcgccgacctccgcgccaccaacgccgcgctcaccgccttcgtccgct 126650 Query: 316 ccctcccgtccgtcaaggctctagtcaccgacttgttctgtgcctacgggttggacgccg 375 ||||||||||||| |||| || |||| |||||| |||||||| || ||| | ||||||| Sbjct: 126649 ccctcccgtccgtggaggccctcgtcatcgacttcttctgtgcgtatgggctcgacgccg 126590 Query: 376 ccgcagagctcggcgtcccggcctaccttttcttcacctcggctgcgtcggtccttgctg 435 |||| ||||||||||||||||||||||| |||||| ||| || |||| ||||||| Sbjct: 126589 ccgcggagctcggcgtcccggcctacctgttcttcgtctcctgcgcttcggcccttgctt 126530 Query: 436 cctacctgcacatccccgtcatgcgctccgctgtctcctt 475 ||||||||||||||||||||||||| ||||| || ||||| Sbjct: 126529 cctacctgcacatccccgtcatgcgatccgccgtgtcctt 126490 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 131794 gacgtcgccgccgagctcgccgtcccggcctac 131762
>dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-G02, full insert sequence Length = 1463 Score = 190 bits (96), Expect = 3e-45 Identities = 370/460 (80%), Gaps = 6/460 (1%) Strand = Plus / Minus Query: 22 tcgtgcttttcacatggctggtcaggggccaccttcacccaatgacacagttcgcccacc 81 ||||||| | ||||||| ||||| |||| ||||| ||||| ||||| ||| ||||| | | Sbjct: 1276 tcgtgctgtacacatggatggtccgggggcacctccaccccatgacgcagctcgccgatc 1217 Query: 82 acctcgctagacatggcgttcctgtcaccgtcgccgtcgccgacgtcccgtctacaggca 141 | |||| | |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1216 gcatcgccaaccatggcgtccccgtcacggtcgccgtcgccgacgttccgtcgtcaggcg 1157 Query: 142 agtcctctgagaccatcgccggcctcgccgcatcctatccttctgtctcgttccacctaa 201 ||||| | ||||| | ||| ||||| |||| | ||| ||||| ||||| ||||| || Sbjct: 1156 agtcccgtaagaccgttgcccgcctctccgcctactacccttccgtctccttccagctgc 1097 Query: 202 tcccgccggcagc---gacccgttccg---ccgagacggcagaccccgacgccgatcctt 255 | || ||||| || | ||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 1096 taccaccggcggcaccggcccgttccggcgccgacacggccgaccctgacgctgacccct 1037 Query: 256 tcatcgcccttatcgccgacctccgcgccgccaaccccgccctcctcgccttcctgaggt 315 ||||| |||| ||||||||||||||||| ||||| |||| ||| ||||||| | | | Sbjct: 1036 tcatcaccctcctcgccgacctccgcgccaccaacgccgcgctcaccgccttcgtccgct 977 Query: 316 ccctcccgtccgtcaaggctctagtcaccgacttgttctgtgcctacgggttggacgccg 375 ||||||||||||| |||| || |||| |||||| |||||||| || ||| | ||||||| Sbjct: 976 ccctcccgtccgtggaggccctcgtcatcgacttcttctgtgcgtatgggctcgacgccg 917 Query: 376 ccgcagagctcggcgtcccggcctaccttttcttcacctcggctgcgtcggtccttgctg 435 |||| ||||||||||||||||||||||| |||||| ||| || |||| ||||||| Sbjct: 916 ccgcggagctcggcgtcccggcctacctgttcttcgtctcctgcgcttcggcccttgctt 857 Query: 436 cctacctgcacatccccgtcatgcgctccgctgtctcctt 475 ||||||||||||||||||||||||| ||||| || ||||| Sbjct: 856 cctacctgcacatccccgtcatgcgatccgccgtgtcctt 817
>dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E08, full insert sequence Length = 1603 Score = 190 bits (96), Expect = 3e-45 Identities = 370/460 (80%), Gaps = 6/460 (1%) Strand = Plus / Plus Query: 22 tcgtgcttttcacatggctggtcaggggccaccttcacccaatgacacagttcgcccacc 81 ||||||| | ||||||| ||||| |||| ||||| ||||| ||||| ||| ||||| | | Sbjct: 39 tcgtgctgtacacatggatggtccgggggcacctccaccccatgacgcagctcgccgatc 98 Query: 82 acctcgctagacatggcgttcctgtcaccgtcgccgtcgccgacgtcccgtctacaggca 141 | |||| | |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 99 gcatcgccaaccatggcgtccccgtcacggtcgccgtcgccgacgttccgtcgtcaggcg 158 Query: 142 agtcctctgagaccatcgccggcctcgccgcatcctatccttctgtctcgttccacctaa 201 ||||| | ||||| | ||| ||||| |||| | ||| ||||| ||||| ||||| || Sbjct: 159 agtcccgtaagaccgttgcccgcctctccgcctactacccttccgtctccttccagctgc 218 Query: 202 tcccgccggcagc---gacccgttccg---ccgagacggcagaccccgacgccgatcctt 255 | || ||||| || | ||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 219 taccaccggcggcaccggcccgttccggcgccgacacggccgaccctgacgctgacccct 278 Query: 256 tcatcgcccttatcgccgacctccgcgccgccaaccccgccctcctcgccttcctgaggt 315 ||||| |||| ||||||||||||||||| ||||| |||| ||| ||||||| | | | Sbjct: 279 tcatcaccctcctcgccgacctccgcgccaccaacgccgcgctcaccgccttcgtccgct 338 Query: 316 ccctcccgtccgtcaaggctctagtcaccgacttgttctgtgcctacgggttggacgccg 375 ||||||||||||| |||| || |||| |||||| |||||||| || ||| | ||||||| Sbjct: 339 ccctcccgtccgtggaggccctcgtcatcgacttcttctgtgcgtatgggctcgacgccg 398 Query: 376 ccgcagagctcggcgtcccggcctaccttttcttcacctcggctgcgtcggtccttgctg 435 |||| ||||||||||||||||||||||| |||||| ||| || |||| ||||||| Sbjct: 399 ccgcggagctcggcgtcccggcctacctgttcttcgtctcctgcgcttcggcccttgctt 458 Query: 436 cctacctgcacatccccgtcatgcgctccgctgtctcctt 475 ||||||||||||||||||||||||| ||||| || ||||| Sbjct: 459 cctacctgcacatccccgtcatgcgatccgccgtgtcctt 498
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 100 ttcctgtcaccgtcgccgtcgcc 122 ||||||||||||||||||||||| Sbjct: 7969042 ttcctgtcaccgtcgccgtcgcc 7969020 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ccgtcgccgtcgccgacgtcccgt 132 ||||||||||||||| |||||||| Sbjct: 19731685 ccgtcgccgtcgccgtcgtcccgt 19731662 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||| |||| Sbjct: 17644777 gtcaccgtcgccgtcgccggcgtc 17644754
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 100 ttcctgtcaccgtcgccgtcgcc 122 ||||||||||||||||||||||| Sbjct: 41212 ttcctgtcaccgtcgccgtcgcc 41190
>ref|XM_471040.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 900 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 caccgtcgccgtcgccgacgtc 128 |||||||||||||||||||||| Sbjct: 436 caccgtcgccgtcgccgacgtc 415
>ref|XM_465762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||||| |||| Sbjct: 508 ctgtcaccgtcgccgtcgccgtcgtc 483
>ref|XM_469556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1392 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacg 126 |||||||||||||||||||||| Sbjct: 101 gtcaccgtcgccgtcgccgacg 80
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 ccgtcgccgtcgccgacgtccc 130 |||||||||||||||||||||| Sbjct: 85424 ccgtcgccgtcgccgacgtccc 85445
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacg 126 |||||||||||||||||||||| Sbjct: 28683128 gtcaccgtcgccgtcgccgacg 28683107
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 caccgtcgccgtcgccgacgtc 128 |||||||||||||||||||||| Sbjct: 35459 caccgtcgccgtcgccgacgtc 35480
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 caccgtcgccgtcgccgacgtc 128 |||||||||||||||||||||| Sbjct: 955740 caccgtcgccgtcgccgacgtc 955761
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 ccgtcgccgtcgccgacgtccc 130 |||||||||||||||||||||| Sbjct: 8004579 ccgtcgccgtcgccgacgtccc 8004600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacg 126 |||||||||||||||||||||| Sbjct: 28774452 gtcaccgtcgccgtcgccgacg 28774431
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||||| |||| Sbjct: 17250854 ctgtcaccgtcgccgtcgccgtcgtc 17250829 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 |||| ||||||||||||||||||| Sbjct: 34442294 gtcatcgtcgccgtcgccgacgtc 34442271
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 gtcaccgtcgccgtcgccgacg 126 |||||||||||||||||||||| Sbjct: 15768 gtcaccgtcgccgtcgccgacg 15789
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||||| |||| Sbjct: 23537 ctgtcaccgtcgccgtcgccgtcgtc 23512
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||||| |||| Sbjct: 121621 ctgtcaccgtcgccgtcgccgtcgtc 121596
>dbj|AK064677.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-G03, full insert sequence Length = 1151 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 caccgtcgccgtcgccgacgtc 128 |||||||||||||||||||||| Sbjct: 477 caccgtcgccgtcgccgacgtc 456
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 ccgtcgccgtcgccgacgtccc 130 |||||||||||||||||||||| Sbjct: 8074635 ccgtcgccgtcgccgacgtccc 8074656
>ref|NM_191569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 364 gacgtcgccgccgagctcgccgtcccggcctac 396
>ref|XM_463383.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 367 tggacgccgccgcagagctcggcgtcccg 395 ||||||||||||| |||| |||||||||| Sbjct: 404 tggacgccgccgccgagcacggcgtcccg 432
>gb|AY072712.1| Oryza sativa Ramy1 (ramy1) mRNA, complete cds Length = 785 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 359 cgccgacctccgcgccgcccacctcgccc 387
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 tgtcaccgtcgccgtcgccgacgtc 128 ||||||||||||| ||||||||||| Sbjct: 2700691 tgtcaccgtcgccatcgccgacgtc 2700715
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 120653 cgccgacctccgcgccgcccacctcgccc 120625
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gagaccatcgccggcctcgcc 170 ||||||||||||||||||||| Sbjct: 3370541 gagaccatcgccggcctcgcc 3370561
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 367 tggacgccgccgcagagctcggcgtcccg 395 ||||||||||||| |||| |||||||||| Sbjct: 15983 tggacgccgccgccgagcacggcgtcccg 16011
>dbj|AK119698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D03, full insert sequence Length = 799 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 370 cgccgacctccgcgccgcccacctcgccc 398
>dbj|AK103355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126K03, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 447 gacgtcgccgccgagctcgccgtcccggcctac 479
>dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102B03, full insert sequence Length = 1675 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 367 tggacgccgccgcagagctcggcgtcccg 395 ||||||||||||| |||| |||||||||| Sbjct: 493 tggacgccgccgccgagcacggcgtcccg 521
>dbj|AK099365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048K03, full insert sequence Length = 1651 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 388 gacgtcgccgccgagctcgccgtcccggcctac 420
>dbj|AK069098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B04, full insert sequence Length = 806 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 371 cgccgacctccgcgccgcccacctcgccc 399
>dbj|AK064298.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A05, full insert sequence Length = 1717 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 369 gacgccgccgcagagctcggcgtcccggcctac 401 |||| |||||| ||||||| ||||||||||||| Sbjct: 394 gacgtcgccgccgagctcgccgtcccggcctac 426
>dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H06, full insert sequence Length = 1962 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 367 tggacgccgccgcagagctcggcgtcccg 395 ||||||||||||| |||| |||||||||| Sbjct: 494 tggacgccgccgccgagcacggcgtcccg 522
>gb|U46138.1|OSU46138 Oryza sativa Zn-induced protein (RezA) mRNA, complete cds Length = 791 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 cgccgacctccgcgccgccaaccccgccc 297 ||||||||||||||||||| ||| ||||| Sbjct: 342 cgccgacctccgcgccgcccacctcgccc 370
>ref|NM_185461.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2615 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cctccgcgccgccaaccccgccctcctc 302 ||||| ||||||| |||||||||||||| Sbjct: 402 cctccccgccgccgaccccgccctcctc 429
>ref|XM_482382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgtcgccgtcgccgacgtcccgt 132 ||||||||||||||| |||||||| Sbjct: 69 ccgtcgccgtcgccgtcgtcccgt 92
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||| |||| Sbjct: 1870 gtcaccgtcgccgtcgccggcgtc 1893
>ref|XM_468296.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2787 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 |||| ||||||||||||||||||| Sbjct: 1603 gtcatcgtcgccgtcgccgacgtc 1626
>ref|XM_450229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 451 ctgtcaccgtcgccgtcgcc 432
>ref|NM_192244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 408 ggacgccgccgccgagcacggcgtcccg 435
>ref|XM_477783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgtcaccgtcgccgtcgccg 123 |||||||||||||||||||| Sbjct: 185 tgtcaccgtcgccgtcgccg 204
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgtcgccgtcgccgacgtc 128 |||||||||||||||||||| Sbjct: 121999 ccgtcgccgtcgccgacgtc 121980
>gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone CL029396.2 R2R3-MYB gene region Length = 16710 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 6109 ggacgccgccgccgagcacggcgtcccg 6082
>emb|CR734198.2|CNS0GTAD Tetraodon nigroviridis full-length cDNA Length = 1201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 493 ctgtcaccgtcgccgtcgcc 474
>emb|CR733435.2|CNS0GSP6 Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 431 ctgtcaccgtcgccgtcgcc 412
>emb|CR733049.2|CNS0GSJ0 Tetraodon nigroviridis full-length cDNA Length = 1125 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 457 ctgtcaccgtcgccgtcgcc 438
>emb|CR731241.2|CNS0GR66 Tetraodon nigroviridis full-length cDNA Length = 1145 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 428 ctgtcaccgtcgccgtcgcc 409
>emb|CR731083.2|CNS0GR1S Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 438 ctgtcaccgtcgccgtcgcc 419
>emb|CR730963.2|CNS0GQYG Tetraodon nigroviridis full-length cDNA Length = 1146 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 429 ctgtcaccgtcgccgtcgcc 410
>emb|CR730702.2|CNS0GQR7 Tetraodon nigroviridis full-length cDNA Length = 1146 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 429 ctgtcaccgtcgccgtcgcc 410
>emb|CR730328.2|CNS0GQGT Tetraodon nigroviridis full-length cDNA Length = 1095 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 426 ctgtcaccgtcgccgtcgcc 407
>emb|CR729658.2|CNS0GPY8 Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 440 ctgtcaccgtcgccgtcgcc 421
>emb|CR726492.2|CNS0GNIA Tetraodon nigroviridis full-length cDNA Length = 1142 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 423 ctgtcaccgtcgccgtcgcc 404
>emb|CR726146.2|CNS0GN8O Tetraodon nigroviridis full-length cDNA Length = 1059 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 360 ctgtcaccgtcgccgtcgcc 341
>emb|CR693015.1|CNS0FXOJ Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 453 ctgtcaccgtcgccgtcgcc 434
>emb|CR685601.2|CNS0FRYL Tetraodon nigroviridis full-length cDNA Length = 1148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 437 ctgtcaccgtcgccgtcgcc 418
>emb|CR637047.2|CNS0EQIL Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 436 ctgtcaccgtcgccgtcgcc 417
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tccgcgccgccaaccccgcc 296 |||||||||||||||||||| Sbjct: 1856520 tccgcgccgccaaccccgcc 1856501
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgtcgccgtcgccgacgtc 128 |||||||||||||||||||| Sbjct: 67636 ccgtcgccgtcgccgacgtc 67617
>gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, complete sequence Length = 191630 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tcacatggctggtcaggggc 50 |||||||||||||||||||| Sbjct: 139039 tcacatggctggtcaggggc 139058
>gb|AC005865.1| Homo sapiens 12 PAC RPCI5-1063M23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 112911 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 cgccttcctgaggtccctcccgtccgtc 329 ||||||||||||| |||||| ||||||| Sbjct: 8255 cgccttcctgaggcccctcctgtccgtc 8282
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 |||| ||||||||||||||||||| Sbjct: 62905 gtcatcgtcgccgtcgccgacgtc 62928
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 3296673 ctgtcaccgtcgccgtcgcc 3296692
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgtcaccgtcgccgtcgccg 123 |||||||||||||||||||| Sbjct: 14406664 tgtcaccgtcgccgtcgccg 14406683
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcgccgacctccgcgccgccaacc 291 ||||||| |||||||||||||||| Sbjct: 25293612 tcgccgagctccgcgccgccaacc 25293635 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cctccgcgccgccaaccccgccctcctc 302 ||||| ||||||| |||||||||||||| Sbjct: 1362400 cctccccgccgccgaccccgccctcctc 1362427
>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0673E01 Length = 125909 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgtcaccgtcgccgtcgccg 123 |||||||||||||||||||| Sbjct: 26995 tgtcaccgtcgccgtcgccg 27014
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 accccgccctcctcgccttc 308 |||||||||||||||||||| Sbjct: 877985 accccgccctcctcgccttc 877966
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 12605 ctgtcaccgtcgccgtcgcc 12624
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 39468 ggacgccgccgccgagcacggcgtcccg 39495
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 120265 ggacgccgccgccgagcacggcgtcccg 120292
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cctccgcgccgccaaccccgccctcctc 302 ||||| ||||||| |||||||||||||| Sbjct: 70939 cctccccgccgccgaccccgccctcctc 70966
>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_C07 Length = 115190 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 |||| ||||||||||||||||||| Sbjct: 58536 gtcatcgtcgccgtcgccgacgtc 58513
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcgccgacctccgcgccgccaacc 291 ||||||| |||||||||||||||| Sbjct: 112220 tcgccgagctccgcgccgccaacc 112243
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 172986 ctgtcaccgtcgccgtcgcc 173005
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ccgtcgccgtcgccgacgtcccgt 132 ||||||||||||||| |||||||| Sbjct: 60636 ccgtcgccgtcgccgtcgtcccgt 60613
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||| |||| Sbjct: 121427 gtcaccgtcgccgtcgccggcgtc 121404
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||| |||| Sbjct: 30166 gtcaccgtcgccgtcgccggcgtc 30143
>dbj|AK119865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A05, full insert sequence Length = 3917 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ctgtcaccgtcgccgtcgcc 122 |||||||||||||||||||| Sbjct: 964 ctgtcaccgtcgccgtcgcc 945
>emb|X03433.1|ARTLROLB A. rhizogenes pRiA4 plasmid TL-DNA rolB-C genes Length = 2949 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccctcctcgccttcctga 312 |||||||||||||||||||| Sbjct: 2599 cgccctcctcgccttcctga 2580
>dbj|AK109698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F03, full insert sequence Length = 1627 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cctccgcgccgccaaccccgccctcctc 302 ||||| ||||||| |||||||||||||| Sbjct: 160 cctccccgccgccgaccccgccctcctc 187
>dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K24, full insert sequence Length = 1896 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 505 ggacgccgccgccgagcacggcgtcccg 532
>dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I21, full insert sequence Length = 1896 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 368 ggacgccgccgcagagctcggcgtcccg 395 |||||||||||| |||| |||||||||| Sbjct: 505 ggacgccgccgccgagcacggcgtcccg 532
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gtcaccgtcgccgtcgccgacgtc 128 ||||||||||||||||||| |||| Sbjct: 1870 gtcaccgtcgccgtcgccggcgtc 1893
>dbj|AK072112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121K07, full insert sequence Length = 2615 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cctccgcgccgccaaccccgccctcctc 302 ||||| ||||||| |||||||||||||| Sbjct: 402 cctccccgccgccgaccccgccctcctc 429
>dbj|AK062505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-B06, full insert sequence Length = 609 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgtcgccgtcgccgacgtcccgt 132 ||||||||||||||| |||||||| Sbjct: 69 ccgtcgccgtcgccgtcgtcccgt 92
>emb|AJ875019.1| Streptoalloteichus hindustanus partial apramycin biosynthesis gene cluster, type strain DSM 44523T Length = 39979 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cgccgacctccgcgccgcca 288 |||||||||||||||||||| Sbjct: 1157 cgccgacctccgcgccgcca 1138
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 accccgccctcctcgccttc 308 |||||||||||||||||||| Sbjct: 544566 accccgccctcctcgccttc 544547
>gb|AF022734.1|AF022734 Oryza sativa zinc inducible protein mRNA, complete cds Length = 801 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 cgccgacctccgcgccgccaaccccgcc 296 ||||||||||||||||||| ||| |||| Sbjct: 357 cgccgacctccgcgccgcccacctcgcc 384
>gb|K03313.1|RIATL Integrated Ri plasmid agropine (A. rhizogenes strain A4) complete TL-DNA and flanking plant (Convolvulus arvensis) DNA Length = 21126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cgccctcctcgccttcctga 312 |||||||||||||||||||| Sbjct: 10547 cgccctcctcgccttcctga 10566 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,919,196 Number of Sequences: 3902068 Number of extensions: 2919196 Number of successful extensions: 67250 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65194 Number of HSP's gapped (non-prelim): 2056 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
