>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 992

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 338 QEPRFRPGR----PRAQLGRPDHPDGAAVLRG 421
           Q PR + GR    PR +LG P +P  AAV RG
Sbjct: 104 QPPRMQTGRGGSAPRPELGPPTNPFQAAVARG 135

>XYLA_STRRO (P22857) Xylose isomerase (EC 5.3.1.5)|
          Length = 393

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +3

Query: 84  RTMASKPGPLTRWPCHDMGNYKYALVAPWAAYSTYRFAAATARG 215
           R  AS P   T WP   + +   AL+A   A+  +   AA ARG
Sbjct: 324 RRRASAPRVWTSWPSRPLADGLEALLADRTAFEDFDVEAAAARG 367

>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 338 QEPRFRPGR----PRAQLGRPDHPDGAAVLRG 421
           Q PR + GR    PR +LG P +P  AAV RG
Sbjct: 105 QPPRMQTGRGGSAPRPELGPPTNPFQAAVARG 136

>POLS_RUBVR (P19725) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 338 QEPRFRPGR----PRAQLGRPDHPDGAAVLRG 421
           Q PR + GR    PR +LG P +P  AAV RG
Sbjct: 105 QPPRMQTGRGGSAPRPELGPPTNPFQAAVARG 136

>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 338 QEPRFRPGR----PRAQLGRPDHPDGAAVLRG 421
           Q PR + GR    PR +LG P +P  AAV RG
Sbjct: 105 QPPRMQTGRGGSAPRPELGPPTNPFQAAVARG 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,820,039
Number of Sequences: 219361
Number of extensions: 671520
Number of successful extensions: 2497
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2495
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)