| Clone Name | bast64a03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2219 Score = 125 bits (63), Expect = 1e-25 Identities = 147/175 (84%) Strand = Plus / Plus Query: 249 cccacgctcctcttccgcctgctctacacccagctctggatctccgtctcccgccaccag 308 |||| ||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 254 cccatgctgctcctccgtctgctctacggccagctctggatcaccgtctcccgccaccag 313 Query: 309 accgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcgaccaggtcgaccgc 368 || ||||| ||||||| ||||||| |||||||||||| ||||| || ||||| | Sbjct: 314 actgcccggagcaagcacaagatcgtcaacaagagcctcgacttcgaacaaatcgacagg 373 Query: 369 gagcgcaactgggacgaccagatcatcctgacggcgctgctgttctacgtggtga 423 || | |||||||| |||||||| ||||||||||||||| |||||||| |||||| Sbjct: 374 gaaagaaactgggatgaccagataatcctgacggcgctggtgttctacttggtga 428 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 90 atggcctccaagcccggccctctcacccggtggccatgtcacgacatgggaaactacaag 149 |||||||| ||||| || |||||||| | |||||| || || || | |||||||||||| Sbjct: 98 atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 157 Query: 150 tacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 204 ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 158 tacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 212
>dbj|AK068166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134I09, full insert sequence Length = 2219 Score = 125 bits (63), Expect = 1e-25 Identities = 147/175 (84%) Strand = Plus / Plus Query: 249 cccacgctcctcttccgcctgctctacacccagctctggatctccgtctcccgccaccag 308 |||| ||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 254 cccatgctgctcctccgtctgctctacggccagctctggatcaccgtctcccgccaccag 313 Query: 309 accgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcgaccaggtcgaccgc 368 || ||||| ||||||| ||||||| |||||||||||| ||||| || ||||| | Sbjct: 314 actgcccggagcaagcacaagatcgtcaacaagagcctcgacttcgaacaaatcgacagg 373 Query: 369 gagcgcaactgggacgaccagatcatcctgacggcgctgctgttctacgtggtga 423 || | |||||||| |||||||| ||||||||||||||| |||||||| |||||| Sbjct: 374 gaaagaaactgggatgaccagataatcctgacggcgctggtgttctacttggtga 428 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 90 atggcctccaagcccggccctctcacccggtggccatgtcacgacatgggaaactacaag 149 |||||||| ||||| || |||||||| | |||||| || || || | |||||||||||| Sbjct: 98 atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 157 Query: 150 tacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 204 ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 158 tacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 212
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 148 agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 204 ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 34912096 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 34912040 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 249 cccacgctcctcttccgcctgctctacacccagctctggatctccgtctcccgccaccag 308 |||| ||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 34911998 cccatgctgctcctccgtctgctctacggccagctctggatcaccgtctcccgccaccag 34911939 Query: 309 accgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcga 355 || ||||| ||||||| ||||||| |||||||||||| ||||| Sbjct: 34911938 actgcccggagcaagcacaagatcgtcaacaagagcctcgacttcga 34911892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 278 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 337 |||| |||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 24742970 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 24742911 Query: 338 caagagcctcgatttcgaccaggtcgaccgcgagcg 373 | || |||| ||||||||||||||||||||||| Sbjct: 24742910 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 24742875 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 423 |||| |||||||| ||||||||||||||| |||||||| |||||| Sbjct: 34911585 gggatgaccagataatcctgacggcgctggtgttctacttggtga 34911541 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 ||||||||| ||| ||||||||||||||| Sbjct: 33502178 gcggcggcggcggagaggggcgaggaggg 33502150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 30941363 ttcgcggcggcgacggcgagg 30941383 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 gcggcgacggcgaggggcgaggagg 222 |||||| |||||||||||||||||| Sbjct: 10865989 gcggcggcggcgaggggcgaggagg 10866013 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 25303649 gcggcggcgacggcgagggg 25303668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 18580618 gcggcggcgacggcgagggg 18580637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 12827807 gcggcggcgacggcgagggg 12827788 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 623174 tcgcggcggcgacggcgagg 623155
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 148 agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 204 ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 133691 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 133635 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 249 cccacgctcctcttccgcctgctctacacccagctctggatctccgtctcccgccaccag 308 |||| ||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 133593 cccatgctgctcctccgtctgctctacggccagctctggatcaccgtctcccgccaccag 133534 Query: 309 accgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcga 355 || ||||| ||||||| ||||||| |||||||||||| ||||| Sbjct: 133533 actgcccggagcaagcacaagatcgtcaacaagagcctcgacttcga 133487 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 423 |||| |||||||| ||||||||||||||| |||||||| |||||| Sbjct: 133180 gggatgaccagataatcctgacggcgctggtgttctacttggtga 133136
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 148 agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 204 ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 71593 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 71537 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 249 cccacgctcctcttccgcctgctctacacccagctctggatctccgtctcccgccaccag 308 |||| ||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 71495 cccatgctgctcctccgtctgctctacggccagctctggatcaccgtctcccgccaccag 71436 Query: 309 accgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcga 355 || ||||| ||||||| ||||||| |||||||||||| ||||| Sbjct: 71435 actgcccggagcaagcacaagatcgtcaacaagagcctcgacttcga 71389 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 423 |||| |||||||| ||||||||||||||| |||||||| |||||| Sbjct: 71082 gggatgaccagataatcctgacggcgctggtgttctacttggtga 71038
>ref|XM_466799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2481 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 278 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 337 |||| |||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 291 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 350 Query: 338 caagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatc 392 | || |||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 351 ccgcggcatcgagttcgaccaggtcgaccgcgagcgaggctgggatgaccagatc 405
>ref|NM_196959.1| Oryza sativa (japonica cultivar-group) putative CER1 (OSJNBa0079L16.17), mRNA Length = 2195 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 346 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 399 |||| ||||||||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 339 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 392
>dbj|AK121097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L20, full insert sequence Length = 786 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 346 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 399 |||| ||||||||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 347 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 400
>dbj|AK100751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118L15, full insert sequence Length = 2339 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 346 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 399 |||| ||||||||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 435 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 488
>gb|AF143746.1|AF143746 Oryza sativa CER1 (CER1) mRNA, complete cds Length = 2211 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 346 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 399 |||| ||||||||||| ||||||||| | ||||||||||||||||||||||||| Sbjct: 332 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 385
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 278 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 337 |||| |||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 124368 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 124309 Query: 338 caagagcctcgatttcgaccaggtcgaccgcgagcg 373 | || |||| ||||||||||||||||||||||| Sbjct: 124308 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 124273
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 278 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 337 |||| |||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 42618 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 42559 Query: 338 caagagcctcgatttcgaccaggtcgaccgcgagcg 373 | || |||| ||||||||||||||||||||||| Sbjct: 42558 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 42523
>gb|AY104752.1| Zea mays PCO127123 mRNA sequence Length = 2262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 346 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcct 397 |||| ||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 334 tcgagttcgaccaggtcgaccgggagcgcggctgggacgaccagatcatcct 385
>dbj|AK066386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066F17, full insert sequence Length = 2481 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 278 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 337 |||| |||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 291 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 350 Query: 338 caagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatc 392 | || |||| |||| |||||||||||||||||| |||||| ||||||||| Sbjct: 351 ccgcggcatcgagttcggccaggtcgaccgcgagcgaggctgggatgaccagatc 405
>gb|AY022407.1| Oryza sativa microsatellite MRG4732 containing (ACA)X8, closest to marker S10844, genomic sequence Length = 224 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 305 ccagaccgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcgaccaggtcga 364 ||||||||||||| |||||||||||||||| | || |||| |||||||||||||| Sbjct: 1 ccagaccgcccgcagcaagcaccgcatcgtcgaccgcggcatcgagttcgaccaggtcga 60 Query: 365 ccgcgagcg 373 ||||||||| Sbjct: 61 ccgcgagcg 69
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 |||||||||||||||||||| |||||||| Sbjct: 19503501 gcggcggcgacggcgaggggggaggaggg 19503473 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 3012330 ttcgcggcggcgacggcgagg 3012310 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 23517007 gcggcggcgacggcgagggg 23516988
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 |||||||||||||||||||| |||||||| Sbjct: 19429714 gcggcggcgacggcgaggggggaggaggg 19429686 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 3012275 ttcgcggcggcgacggcgagg 3012255 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 23445198 gcggcggcgacggcgagggg 23445179
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 |||||||||||||||||||| |||||||| Sbjct: 35682 gcggcggcgacggcgaggggggaggaggg 35654
>ref|XM_483250.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1974 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 194 cgcggcggcgacggcgaggggcgaggag 221 |||||||||||||||||||| ||||||| Sbjct: 900 cgcggcggcgacggcgagggacgaggag 927
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 194 cgcggcggcgacggcgaggggcgaggag 221 |||||||||||||||||||| ||||||| Sbjct: 25054493 cgcggcggcgacggcgagggacgaggag 25054520 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 26382569 gcggcggcgacggcgagggg 26382588 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 17621711 tcgcggcggcgacggcgagg 17621692
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 194 cgcggcggcgacggcgaggggcgaggag 221 |||||||||||||||||||| ||||||| Sbjct: 110609 cgcggcggcgacggcgagggacgaggag 110636
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgaggggcga 217 ||||||||||||||||||||||| Sbjct: 19091 gcggcggcgacggcgaggggcga 19113
>dbj|AB017041.1| Blastochloris sulfoviridis gene for photosynthetic reaction center L subunit, photosynthetic reaction center M subunit Length = 1500 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 157 tggtggcgccgtgggcggcgtacagca 183 |||||||||||||||||||| |||||| Sbjct: 1417 tggtggcgccgtgggcggcgaacagca 1391
>ref|XM_476776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2619 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 ggttcgcggcggcgacggcgaggggc 215 |||||||||||||| ||||||||||| Sbjct: 138 ggttcgcggcggcggcggcgaggggc 113
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcg 216 |||||||||||||||||||||| Sbjct: 24794 gcggcggcgacggcgaggggcg 24773
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcg 216 |||||||||||||||||||||| Sbjct: 142451 gcggcggcgacggcgaggggcg 142430
>dbj|AK061867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H10, full insert sequence Length = 961 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgagga 220 |||||||||||||||||||| ||||| Sbjct: 26 gcggcggcgacggcgaggggggagga 1
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcg 216 |||||||||||||||||||||| Sbjct: 2490354 gcggcggcgacggcgaggggcg 2490333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 190 ggttcgcggcggcgacggcgaggggc 215 |||||||||||||| ||||||||||| Sbjct: 3852733 ggttcgcggcggcggcggcgaggggc 3852758 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 20152087 gcggcggcgacggcgagggg 20152106 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggg 213 |||||||||||||||||||| Sbjct: 15928997 cgcggcggcgacggcgaggg 15928978
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 190 ggttcgcggcggcgacggcgaggggc 215 |||||||||||||| ||||||||||| Sbjct: 91845 ggttcgcggcggcggcggcgaggggc 91870
>dbj|AK108190.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C01, full insert sequence Length = 1212 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcg 216 |||||||||||||||||||||| Sbjct: 354 gcggcggcgacggcgaggggcg 333
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcg 216 |||||||||||||||||||||| Sbjct: 2499428 gcggcggcgacggcgaggggcg 2499407
>ref|XM_468178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1801 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 ||||||||| ||| ||||||||||||||| Sbjct: 267 gcggcggcggcggagaggggcgaggaggg 295
>ref|XM_467697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1546 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 74 ttcgcggcggcgacggcgagg 54
>ref|XM_506960.1| PREDICTED Oryza sativa (japonica cultivar-group), P0684F11.25 mRNA Length = 1565 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 73 ttcgcggcggcgacggcgagg 53
>ref|XM_465003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gcggcgacggcgaggggcgaggagg 222 |||||| |||||||||||||||||| Sbjct: 332 gcggcggcggcgaggggcgaggagg 308
>gb|AC011251.6| Drosophila melanogaster clone BACR09F10, complete sequence Length = 173988 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tcctcttccgcctgctctaca 276 ||||||||||||||||||||| Sbjct: 32656 tcctcttccgcctgctctaca 32676
>ref|XM_847336.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-D11 (Hox-4F) (LOC609973), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgaggggc 215 ||||||||||||||||||||| Sbjct: 728 gcggcggcgacggcgaggggc 748
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 cgccgtgggcggcgtacagca 183 ||||||||||||||||||||| Sbjct: 4287824 cgccgtgggcggcgtacagca 4287804
>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12, complete sequence Length = 154111 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggggcgag 218 |||||||||||||||||| |||||| Sbjct: 87285 cgcggcggcgacggcgagcggcgag 87261
>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence Length = 199866 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gcggcgtacagcacgtacagg 191 ||||||||||||||||||||| Sbjct: 154333 gcggcgtacagcacgtacagg 154353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggggcgag 218 |||||||||||||||||| |||||| Sbjct: 3743864 cgcggcggcgacggcgagcggcgag 3743840 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 32033406 tcgcggcggcgacggcgagg 32033387 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 24944822 gcggcggcgacggcgagggg 24944841 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 19053633 gcggcggcgacggcgagggg 19053652
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctga 399 ||||||||||||||||||||| Sbjct: 16938828 gggacgaccagatcatcctga 16938808
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cgcggcggcgacggcgagggg 214 ||||||||||||||||||||| Sbjct: 9170546 cgcggcggcgacggcgagggg 9170566
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctga 399 ||||||||||||||||||||| Sbjct: 123280 gggacgaccagatcatcctga 123260
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cgcggcggcgacggcgagggg 214 ||||||||||||||||||||| Sbjct: 64568 cgcggcggcgacggcgagggg 64588
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 gcggcgacggcgaggggcgaggagg 222 |||||| |||||||||||||||||| Sbjct: 72188 gcggcggcggcgaggggcgaggagg 72212
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 ||||||||| ||| ||||||||||||||| Sbjct: 77053 gcggcggcggcggagaggggcgaggaggg 77025
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 124940 ttcgcggcggcgacggcgagg 124960
>dbj|AK111451.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B11, full insert sequence Length = 2256 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggggcgag 218 |||||||||||||||||| |||||| Sbjct: 925 cgcggcggcgacggcgagcggcgag 901
>dbj|AK107019.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H06, full insert sequence Length = 1797 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 gcggcgacggcgaggggcgaggagg 222 |||||| |||||||||||||||||| Sbjct: 332 gcggcggcggcgaggggcgaggagg 308
>dbj|AK098950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M01, full insert sequence Length = 1547 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 75 ttcgcggcggcgacggcgagg 55
>dbj|AK065676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I11, full insert sequence Length = 1802 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgaggggcgaggaggg 223 ||||||||| ||| ||||||||||||||| Sbjct: 267 gcggcggcggcggagaggggcgaggaggg 295
>dbj|AK062242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E10, full insert sequence Length = 1563 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 71 ttcgcggcggcgacggcgagg 51
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cgaacaatggcctccaagccc 104 ||||||||||||||||||||| Sbjct: 86024 cgaacaatggcctccaagccc 86004
>emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-507K2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197550 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgagg 219 |||| |||||||||||||||||||| Sbjct: 92938 gcggtggcgacggcgaggggcgagg 92914
>gb|AE003568.4| Drosophila melanogaster chromosome X, section 71 of 74 of the complete sequence Length = 315815 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tcctcttccgcctgctctaca 276 ||||||||||||||||||||| Sbjct: 132636 tcctcttccgcctgctctaca 132656
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cgaacaatggcctccaagccc 104 ||||||||||||||||||||| Sbjct: 185391 cgaacaatggcctccaagccc 185411
>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence Length = 182848 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgagg 219 ||||||||||||| ||||||||||| Sbjct: 25474 gcggcggcgacggggaggggcgagg 25450
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gggacgaccagatcatcctga 399 ||||||||||||||||||||| Sbjct: 16947868 gggacgaccagatcatcctga 16947848
>gb|AF017777.1|AF017777 Drosophila melanogaster tweety (tty), flightless (fli), dodo (dod), penguin (pen), small optic lobes (sol), innocent bystander (iby), waclaw (waw), bobby sox (bbx), sluggish (slg), helicase (hlc), misato (mst), and la costa (lcs) genes, complete cds Length = 66669 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tcctcttccgcctgctctaca 276 ||||||||||||||||||||| Sbjct: 6595 tcctcttccgcctgctctaca 6615
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 142513 ttcgcggcggcgacggcgagg 142533
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ttcgcggcggcgacggcgagg 212 ||||||||||||||||||||| Sbjct: 3771 ttcgcggcggcgacggcgagg 3791
>ref|XM_550287.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2864 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 234 gcggcggcgacggcgagggg 253
>ref|XM_550286.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 19 gcggcggcgacggcgagggg 38
>ref|XM_483470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1862 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 74 gcggcggcgacggcgagggg 93
>ref|XM_482079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2405 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 249 tcgcggcggcgacggcgagg 230
>ref|XM_466891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 164 gcggcggcgacggcgagggg 183
>ref|XM_465958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 820 gcggcggcgacggcgagggg 801
>ref|NM_191507.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ggtggcgccgtgggcggcgt 177 |||||||||||||||||||| Sbjct: 880 ggtggcgccgtgggcggcgt 899
>ref|XM_478448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4365 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 227 gcggcggcgacggcgagggg 246
>ref|XM_477961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 498 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggg 213 |||||||||||||||||||| Sbjct: 66 cgcggcggcgacggcgaggg 47
>gb|BT018933.1| Zea mays clone Contig68.F mRNA sequence Length = 1331 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgag 218 |||||| ||||||||||||||||| Sbjct: 125 gcggcgtcgacggcgaggggcgag 102
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgagg--ggcgaggagg 222 ||||||||||||||||||| |||||||||| Sbjct: 115750 cgcggcggcgacggcgaggacggcgaggagg 115720
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cggcggcgacggcgaggggc 215 |||||||||||||||||||| Sbjct: 44705 cggcggcgacggcgaggggc 44724
>gb|AY022930.1| Oryza sativa microsatellite MRG5255 containing (CTC)X8, closest to marker RG214, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 140 tcgcggcggcgacggcgagg 121
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 cctgctcagcctcttcgtgctgcc 250 ||||||||||||| |||||||||| Sbjct: 387735 cctgctcagcctcctcgtgctgcc 387758
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cgcgctggtggcgccgtggg 171 |||||||||||||||||||| Sbjct: 1264486 cgcgctggtggcgccgtggg 1264505
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 56337 gcggcggcgacggcgagggg 56356
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 65407 gcggcggcgacggcgagggg 65426
>gb|AY387493.1| Zea mays putative glutathione transporter (GT1) mRNA, partial cds Length = 2379 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgctggtggcgccgtgggcg 173 |||||||||||||||||||| Sbjct: 794 cgctggtggcgccgtgggcg 813
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ggcggcgacggcgaggggcg 216 |||||||||||||||||||| Sbjct: 170957 ggcggcgacggcgaggggcg 170938
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ccgagctccgaacaatggcc 95 |||||||||||||||||||| Sbjct: 1998993 ccgagctccgaacaatggcc 1999012
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 145558 gcggcggcgacggcgagggg 145577
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tctcccgccaccagaccgcc 314 |||||||||||||||||||| Sbjct: 1259298 tctcccgccaccagaccgcc 1259279
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 21937123 gcggcggcgacggcgagggg 21937142 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgagg--ggcgaggagg 222 ||||||||||||||||||| |||||||||| Sbjct: 17171615 cgcggcggcgacggcgaggacggcgaggagg 17171585
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggtggcgccgtgggcggcgt 177 |||||||||||||||||||| Sbjct: 33163187 ggtggcgccgtgggcggcgt 33163168 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 3717244 gcggcggcgacggcgagggg 3717225
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggtggcgccgtgggcggcgt 177 |||||||||||||||||||| Sbjct: 100097 ggtggcgccgtgggcggcgt 100078
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 125724 gcggcggcgacggcgagggg 125705
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 54475 gcggcggcgacggcgagggg 54494
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 101227 tcgcggcggcgacggcgagg 101208
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggg 213 |||||||||||||||||||| Sbjct: 168511 cgcggcggcgacggcgaggg 168492
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgaggg 213 |||||||||||||||||||| Sbjct: 10399 cgcggcggcgacggcgaggg 10380
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1657_A07 Length = 125217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 116690 gcggcggcgacggcgagggg 116709
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 47289 gcggcggcgacggcgagggg 47270
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 70800 gcggcggcgacggcgagggg 70819
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 121757 gcggcggcgacggcgagggg 121776
>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1471_E11 Length = 103912 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 6974 gcggcggcgacggcgagggg 6993
>dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, map 22, complete sequences Length = 148847 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gctcctcttccgcctgctct 273 |||||||||||||||||||| Sbjct: 51039 gctcctcttccgcctgctct 51058
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 32121 gcggcggcgacggcgagggg 32140
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 112150 gcggcggcgacggcgagggg 112169
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 98361 tcgcggcggcgacggcgagg 98342
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 7100 tcgcggcggcgacggcgagg 7081
>dbj|AK120653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157E15, full insert sequence Length = 1701 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 121 tcgcggcggcgacggcgagg 102
>gb|AC002378.1|AC002378 Human PAC clone RP3-438O4 from 22q12.1-qter, complete sequence Length = 77516 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agctacgagcaacagagcag 62 |||||||||||||||||||| Sbjct: 55110 agctacgagcaacagagcag 55129
>dbj|AK101199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030L22, full insert sequence Length = 2405 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 249 tcgcggcggcgacggcgagg 230
>dbj|AK100326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L21, full insert sequence Length = 2864 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 234 gcggcggcgacggcgagggg 253
>dbj|AK099039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131C14, full insert sequence Length = 981 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 25 gcggcggcgacggcgagggg 6
>dbj|AK073380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029I23, full insert sequence Length = 901 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 194 cgcggcggcgacggcgagg--ggcgaggagg 222 ||||||||||||||||||| |||||||||| Sbjct: 70 cgcggcggcgacggcgaggacggcgaggagg 40
>dbj|AK068625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K03, full insert sequence Length = 2268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 117 tcgcggcggcgacggcgagg 98
>dbj|AK068138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D01, full insert sequence Length = 1988 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 1095 gcggcggcgacggcgagggg 1076
>dbj|AK065712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M04, full insert sequence Length = 1860 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 74 gcggcggcgacggcgagggg 93
>dbj|AK059832.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A09, full insert sequence Length = 1115 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 117 tcgcggcggcgacggcgagg 98
>gb|AY107905.1| Zea mays PCO122820 mRNA sequence Length = 653 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 gttcgcggcggcgacggcgagggg 214 ||||||||||||| |||||||||| Sbjct: 146 gttcgcggcggcggcggcgagggg 169
>gb|AY104979.1| Zea mays PCO112869 mRNA sequence Length = 1979 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgaggggcgag 218 |||||| ||||||||||||||||| Sbjct: 711 gcggcgtcgacggcgaggggcgag 688
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 16726 tcgcggcggcgacggcgagg 16707
>emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) pdr5 gene for PDR-like ABC transporter, exons 1-19 Length = 12922 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 227 gcggcggcgacggcgagggg 246
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gtacaggttcgcggcggcga 204 |||||||||||||||||||| Sbjct: 1086759 gtacaggttcgcggcggcga 1086740
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcgcggcggcgacggcgagg 212 |||||||||||||||||||| Sbjct: 54113 tcgcggcggcgacggcgagg 54094
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcggcggcgacggcgagggg 214 |||||||||||||||||||| Sbjct: 37555 gcggcggcgacggcgagggg 37536
>gb|U83136.1|RSU83136 Rhodobacter sphaeroides protein-export membrane protein (secF), hypothetical protein (yheA), hypothetical ABC transporter proteins (ccmA, ccmB, and ccmC), hypothetical c-type cytochrome maturation proteins (ccmD and ccmG) genes, complete cds Length = 4576 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 cctgctcagcctcttcgtgctgcc 250 ||||||||||||| |||||||||| Sbjct: 2736 cctgctcagcctcctcgtgctgcc 2759
>dbj|AP001621.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1342D7, MX1-D21S171 region, complete sequence Length = 144087 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gctcctcttccgcctgctct 273 |||||||||||||||||||| Sbjct: 91572 gctcctcttccgcctgctct 91591 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,832,653 Number of Sequences: 3902068 Number of extensions: 2832653 Number of successful extensions: 78704 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 75061 Number of HSP's gapped (non-prelim): 3644 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)