ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast63h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 260 bits (131), Expect = 3e-66 Identities = 230/263 (87%) Strand = Plus / Plus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 136 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 195 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 196 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 255 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 256 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 315 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 316 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 375 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 376 ctccagcgatcctggatcatcct 398
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 260 bits (131), Expect = 3e-66 Identities = 230/263 (87%) Strand = Plus / Minus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 28178489 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 28178430 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 28178429 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 28178370 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 28178369 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 28178310 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 28178309 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 28178250 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 28178249 ctccagcgatcctggatcatcct 28178227 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 378 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23707990 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 23708037 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 27587545 atggggagcgcgctggagacgctatgcgggca 27587514 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 356 tgtgcgggcaggcgttcggcgccggcc 382 ||||||| ||||||||||||||||||| Sbjct: 27339337 tgtgcggccaggcgttcggcgccggcc 27339311
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 260 bits (131), Expect = 3e-66 Identities = 230/263 (87%) Strand = Plus / Minus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 61962 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 61903 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 61902 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 61843 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 61842 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 61783 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 61782 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 61723 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 61722 ctccagcgatcctggatcatcct 61700
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 260 bits (131), Expect = 3e-66 Identities = 230/263 (87%) Strand = Plus / Plus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 136 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 195 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 196 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 255 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 256 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 315 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 316 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 375 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 376 ctccagcgatcctggatcatcct 398
>ref|XM_483802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 256 bits (129), Expect = 5e-65 Identities = 219/249 (87%) Strand = Plus / Plus Query: 180 catcggcacgcccatcgccatcgccacgctcagcatgtacgccgtcagctccgtcaccac 239 ||||||||| ||||||||||||| ||| ||| || |||||| |||||||||| ||||| Sbjct: 1 catcggcacccccatcgccatcggcaccatcaccaactacgccatcagctccgtgaccac 60 Query: 240 catcttcgtcggccaccttggcaacctgcccctcgccgccgcgtccatcggcctctccgt 299 ||| ||| |||||||||| || ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 61 catgttcatcggccacctcggaaacctccccctcgccgccgcctccgtgggcctctccgt 120 Query: 300 cttcgccaccttcgccctcgggttcctactcggcatggggagcgcgctggagacgctgtg 359 |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||||| Sbjct: 121 gttcgccaccttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtg 180 Query: 360 cgggcaggcgttcggcgccggccaggtggccatgctcggcgtctacctgcagcgctcctg 419 ||||||||||||||| ||||| |||||| ||||||| ||||||||||| ||||| ||||| Sbjct: 181 cgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctg 240 Query: 420 gatcgtcct 428 |||| |||| Sbjct: 241 gatcatcct 249
>dbj|AK103815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147C23, full insert sequence Length = 1597 Score = 246 bits (124), Expect = 5e-62 Identities = 217/248 (87%) Strand = Plus / Plus Query: 181 atcggcacgcccatcgccatcgccacgctcagcatgtacgccgtcagctccgtcaccacc 240 |||||||| ||||||||||||| ||| ||| || |||||| |||||| ||| |||||| Sbjct: 2 atcggcacccccatcgccatcggcaccatcaccaactacgccatcagctacgtgaccacc 61 Query: 241 atcttcgtcggccaccttggcaacctgcccctcgccgccgcgtccatcggcctctccgtc 300 || ||| |||||||||| || ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 62 atgttcatcggccacctcggaaacctccccctcgccgccgcctccgtgggcctctccgtg 121 Query: 301 ttcgccaccttcgccctcgggttcctactcggcatggggagcgcgctggagacgctgtgc 360 |||||||||||||||||||| ||||| || |||||||| ||||| ||||||||||||||| Sbjct: 122 ttcgccaccttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgc 181 Query: 361 gggcaggcgttcggcgccggccaggtggccatgctcggcgtctacctgcagcgctcctgg 420 |||||||||||||| ||||| |||||| ||||||| ||||||||||| ||||| |||||| Sbjct: 182 gggcaggcgttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctgg 241 Query: 421 atcgtcct 428 ||| |||| Sbjct: 242 atcatcct 249
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 168 bits (85), Expect = 9e-39 Identities = 130/145 (89%) Strand = Plus / Plus Query: 284 ccatcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcg 343 ||||||||||||||||| || ||| |||| || |||| ||||| |||||||||||||||| Sbjct: 404 ccatcggcctctccgtcgtctccaacttctccttcggcttcctcctcggcatggggagcg 463 Query: 344 cgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtct 403 ||||||||||||||||||||||||||||||| || || |||||||||||||| ||| ||| Sbjct: 464 cgctggagacgctgtgcgggcaggcgttcggggcggggcaggtggccatgctgggcatct 523 Query: 404 acctgcagcgctcctggatcgtcct 428 || |||||||||| |||||| |||| Sbjct: 524 acatgcagcgctcgtggatcatcct 548
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 35286679 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 35286738 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcct 428 |||||||| ||| ||||| |||||||||| |||||| |||| Sbjct: 35286739 gccatgctgggcatctacatgcagcgctcgtggatcatcct 35286779
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 37013 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 37072 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcct 428 |||||||| ||| ||||| |||||||||| |||||| |||| Sbjct: 37073 gccatgctgggcatctacatgcagcgctcgtggatcatcct 37113
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 137 bits (69), Expect = 3e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 98729 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 98788 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcct 428 |||||||| ||| ||||| |||||||||| |||||| |||| Sbjct: 98789 gccatgctgggcatctacatgcagcgctcgtggatcatcct 98829
>ref|XM_482980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2066 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcg 376 |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 366 tcggtttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcg 425 Query: 377 cc 378 || Sbjct: 426 cc 427
>gb|BT009378.1| Triticum aestivum clone wlm96.pk031.e10:fis, full insert mRNA sequence Length = 1558 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145 tcgggttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcgg 202 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 tctacctgcagcgctcctggatcgt 425 |||||||||||||||| |||||||| Sbjct: 229 tctacctgcagcgctcgtggatcgt 253
>dbj|AK067748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118K06, full insert sequence Length = 2067 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcg 376 |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 366 tcggtttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcg 425 Query: 377 cc 378 || Sbjct: 426 cc 427
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 378 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115586 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 115633
>ref|NM_191377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 232 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 291 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 292 atgctgggcgtctacctgcagcg 314
>gb|BT018805.1| Zea mays clone EL01N0529G01.d mRNA sequence Length = 1984 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 440 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 486
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4595844 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 4595890 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 23680657 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 23680598 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 23680597 atgctaggcgtctacatccaacgctcatggatc 23680565 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatg 393 |||||||||||| |||||||||||||||||||||||| |||||| | || | |||| Sbjct: 20604799 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgcgcacaagtacgacatg 20604740 Query: 394 ctcggcgtctacctgcagcg 413 ||||||||||| |||||||| Sbjct: 20604739 ctcggcgtctatctgcagcg 20604720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20679166 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 20679120 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 20586600 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 20586561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 20536105 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 20536066
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4595959 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 4596005 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 23673685 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 23673626 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 23673625 atgctaggcgtctacatccaacgctcatggatc 23673593 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatg 393 |||||||||||| |||||||||||||||||||||||| |||||| | || | |||| Sbjct: 20597828 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgcgcacaagtacgacatg 20597769 Query: 394 ctcggcgtctacctgcagcg 413 ||||||||||| |||||||| Sbjct: 20597768 ctcggcgtctatctgcagcg 20597749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20672195 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 20672149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 20579629 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 20579590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 20529134 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 20529095
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 32265083 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 32265024 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 32265023 atgctgggcgtctacctgcagcg 32265001 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 37784819 gtgcgcgcaggcgttcggcgccgaccag 37784846 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 3091475 ggggttcgtcgccgccgacgcggcggag 3091502
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 135836 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 135777 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 135776 atgctgggcgtctacctgcagcg 135754
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 36799 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 36845
>ref|NM_195333.1| Oryza sativa (japonica cultivar-group) putative membrane protein (OSJNBa0034E15.6), mRNA Length = 1395 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 208 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 267 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 268 gtgctcggcctctacgtgcagcagtcgtggatcgt 302
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 25451 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 25510 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 25511 gtgctcggcctctacgtgcagcagtcgtggatcgt 25545
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 6227893 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 6227952 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 6227953 gtgctcggcctctacgtgcagcagtcgtggatcgt 6227987 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9778350 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9778398 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9718728 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9718680 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9736980 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9736933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 353 cgctgtgcgggcaggcgttcggcgccgg 380 |||||||||||||||||||||||||||| Sbjct: 9742841 cgctgtgcgggcaggcgttcggcgccgg 9742868 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 5946537 ctggacacgctgtgcggccaggcgttcggcgc 5946568 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgtcgccgacgacgcggcg 117 |||||||||||||||||||| Sbjct: 15388251 ccgtcgccgacgacgcggcg 15388270 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 tggagacgctgtgcgggcaggcgt 370 |||| ||||||||||||||||||| Sbjct: 9788688 tggacacgctgtgcgggcaggcgt 9788665
>dbj|AK106877.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E04, full insert sequence Length = 1740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 271 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 330 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 331 gtgctcggcctctacgtgcagcagtcgtggatcgt 365
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 6229479 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 6229538 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 6229539 gtgctcggcctctacgtgcagcagtcgtggatcgt 6229573 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9784389 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9784437 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9724767 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9724719 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9743019 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9742972 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 353 cgctgtgcgggcaggcgttcggcgccgg 380 |||||||||||||||||||||||||||| Sbjct: 9748880 cgctgtgcgggcaggcgttcggcgccgg 9748907 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 5947723 ctggacacgctgtgcggccaggcgttcggcgc 5947754 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgtcgccgacgacgcggcg 117 |||||||||||||||||||| Sbjct: 15396492 ccgtcgccgacgacgcggcg 15396511 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 tggagacgctgtgcgggcaggcgt 370 |||| ||||||||||||||||||| Sbjct: 9794727 tggacacgctgtgcgggcaggcgt 9794704
>ref|XM_463247.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 202 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 261 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 262 atgctaggcgtctacatccaacgctcatggatc 294
>ref|NM_195893.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBa0045C13.2), mRNA Length = 1434 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 251 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 299
>ref|NM_187397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1515 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 190 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 242
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 128740 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 128681 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 128680 atgctaggcgtctacatccaacgctcatggatc 128648
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 130875 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 130923 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 71253 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 71205 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 89505 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 89458 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 353 cgctgtgcgggcaggcgttcggcgccgg 380 |||||||||||||||||||||||||||| Sbjct: 95366 cgctgtgcgggcaggcgttcggcgccgg 95393
>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete sequence Length = 120116 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 12711 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 12652 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 12651 atgctaggcgtctacatccaacgctcatggatc 12619
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 10829 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 10877 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 tggagacgctgtgcgggcaggcgt 370 |||| ||||||||||||||||||| Sbjct: 21167 tggacacgctgtgcgggcaggcgt 21144
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 19858295 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 19858347 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 18904863 ctggagacgctgtgcgggcaggcgtacggcgc 18904832
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 22945 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 22997
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 98454 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 98506
>dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025C14, full insert sequence Length = 1864 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 413 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 465
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 313 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 361
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 324 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 372
>dbj|AK068484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I24, full insert sequence Length = 1915 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 386 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 445 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 446 atgctaggcgtctacatccaacgctcatggatc 478
>ref|XM_462973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1654 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatg 393 |||||||||||| |||||||||||||||||||||||| |||||| | || | |||| Sbjct: 422 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgcgcacaagtacgacatg 481 Query: 394 ctcggcgtctacctgcagcg 413 ||||||||||| |||||||| Sbjct: 482 ctcggcgtctatctgcagcg 501
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatg 393 |||||||||||| |||||||||||||||||||||||| |||||| | || | |||| Sbjct: 18556 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgcgcacaagtacgacatg 18497 Query: 394 ctcggcgtctacctgcagcg 413 ||||||||||| |||||||| Sbjct: 18496 ctcggcgtctatctgcagcg 18477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 92923 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 92877 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 357 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 318
>gb|BT024034.1| Zea mays clone EL01N0423H06 mRNA sequence Length = 1933 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 402 ggcatggcgagcgcgctggagacgctgtccgtgcaggcgttcggcgc 448
>ref|NM_195885.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.8), mRNA Length = 1545 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 269 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 317
>gb|BT019018.1| Zea mays clone Contig516.F mRNA sequence Length = 1546 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 345 gctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||||||||||| Sbjct: 14 gctggagacgctgtgcgggcaggcgttcggcgc 46
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 421 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 469
>ref|NM_195888.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.11), mRNA Length = 975 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 189 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 236
>emb|AM183309.1| Colocasia esculenta microsatellite, clone Ces-1B03 Length = 242 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcgg 374 |||||||||||||||||||||||||||||| ||||| Sbjct: 178 gagcgcgctggagacgctgtgcgggcaggccttcgg 213
>ref|XM_462988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1913 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 343 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 389
>dbj|AK102204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G07, full insert sequence Length = 1918 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 357 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 403
>ref|XM_483675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 439 atggggagcgcgctggagacgctatgcgggca 470
>ref|XM_478265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 292 ctggagacgctgtgcgggcaggcgtacggcgc 323
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete sequence Length = 101073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 100665 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 100626 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 50170 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 50131
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 6848 ctggagacgctgtgcgggcaggcgtacggcgc 6817
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 69835 atggggagcgcgctggagacgctatgcgggca 69804
>dbj|AK120682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C05, full insert sequence Length = 1623 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 388 ctggagacgctgtgcgggcaggcgtacggcgc 419
>dbj|AK101639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055G23, full insert sequence Length = 1734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 410 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 449
>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full insert sequence Length = 1936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 439 atggggagcgcgctggagacgctatgcgggca 470
>ref|XM_462971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||| |||||| ||||||||||||| |||||||||| Sbjct: 1 atgggaagcgcggtggagacgctgtgtgggcaggcgt 37
>ref|XM_462962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| ||| ||||||||||||||||||| |||| Sbjct: 1 atggggagtgcggtggagacgctgtgcgggcaagcgt 37
>ref|XM_472177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 280 ctggacacgctgtgcgggcaggcgttcgg 308
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 18223993 ctggacacgctgtgcgggcaggcgttcgg 18224021
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 59667 ctggacacgctgtgcgggcaggcgttcgg 59695
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 119776 ctggacacgctgtgcggccaggcgttcggcgc 119745
>ref|XM_483627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1665 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 356 tgtgcgggcaggcgttcggcgccggcc 382 ||||||| ||||||||||||||||||| Sbjct: 380 tgtgcggccaggcgttcggcgccggcc 406
>gb|BT008917.1| Triticum aestivum clone wpa1c.pk009.o19:fis, full insert mRNA sequence Length = 1977 Score = 46.1 bits (23), Expect = 0.093 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||| ||| ||||||| || || |||||||||| |||||| Sbjct: 422 ggcatggggagtgcggtggagactctatgtgggcaggcgtacggcgc 468
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 17048939 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 17048977 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 17039360 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 17039403 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 17004630 ttcgtcggccacctcggcgagctccccctcgccggcgcttccat 17004673 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 340 agcgcgctggagacgctgtgcgggcaggcgttcggc 375 ||||| ||||| || |||||||| |||||||||||| Sbjct: 16978572 agcgcactggacaccctgtgcggccaggcgttcggc 16978607 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 16976332 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 16976375
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 49791 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 49829 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 40212 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 40255 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 5482 ttcgtcggccacctcggcgagctccccctcgccggcgcttccat 5525
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 356 tgtgcgggcaggcgttcggcgccggcc 382 ||||||| ||||||||||||||||||| Sbjct: 40864 tgtgcggccaggcgttcggcgccggcc 40838
>dbj|AK109873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B05, full insert sequence Length = 1721 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 270 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 308 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 175 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 218
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 acgctgtgcgggcaggcgttcgg 374 ||||||||||||||||||||||| Sbjct: 133746 acgctgtgcgggcaggcgttcgg 133724
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 acgctgtgcgggcaggcgttcgg 374 ||||||||||||||||||||||| Sbjct: 126214 acgctgtgcgggcaggcgttcgg 126192
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 ccatcgccatcgccacgctcag 212 |||||||||||||||||||||| Sbjct: 1396312 ccatcgccatcgccacgctcag 1396291
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcacgcccatcgccatcgc 203 ||||||||||||||||||||| Sbjct: 2520217 cggcacgcccatcgccatcgc 2520197
>gb|AE004873.1| Pseudomonas aeruginosa PAO1, section 434 of 529 of the complete genome Length = 14053 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 cgccggccaggtggccatgctcggc 399 |||||||| |||||||||||||||| Sbjct: 11118 cgccggcctggtggccatgctcggc 11094
>emb|Z27078.4|CEK04H4 Caenorhabditis elegans Cosmid K04H4, complete sequence Length = 33929 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 ctctccgtcttcgccaccttc 312 ||||||||||||||||||||| Sbjct: 19862 ctctccgtcttcgccaccttc 19842
>gb|U57969.1|PAU57969 Pseudomonas aeruginosa membrane fusion protein MexC (mexC), RND family exporter MexD (mexD), and outer membrane protein OprJ (oprJ) genes, complete cds Length = 6104 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 cgccggccaggtggccatgctcggc 399 |||||||| |||||||||||||||| Sbjct: 3120 cgccggcctggtggccatgctcggc 3144
>ref|NM_202858.1| Arabidopsis thaliana antiporter/ drug transporter/ transporter AT4G21910 transcript variant AT4G21910.2 mRNA, complete cds Length = 1994 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ctcgccgccgcgtccatcgg 290 |||||||||||||||||||| Sbjct: 364 ctcgccgccgcgtccatcgg 383
>ref|XM_475278.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 213 gtgcgtgcaggcgttcggcgccgaccag 240
>ref|NM_196704.1| Oryza sativa (japonica cultivar-group) putative putative glucosyltransferase (OSJNBa0046P18.13), mRNA Length = 762 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgtcgccgacgacgcggcg 117 |||||||||||||||||||| Sbjct: 398 ccgtcgccgacgacgcggcg 379
>ref|NM_195894.1| Oryza sativa (japonica cultivar-group) putative transmembrane protein (OSJNBa0045C13.3), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tggagacgctgtgcgggcaggcgt 370 |||| ||||||||||||||||||| Sbjct: 296 tggacacgctgtgcgggcaggcgt 319
>ref|NM_190802.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1854 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 738 gtgcgcgcaggcgttcggcgccgaccag 765
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gttcggcgccggccaggtgg 388 |||||||||||||||||||| Sbjct: 116406 gttcggcgccggccaggtgg 116387
>gb|AY659004.1| Synthetic construct Peudomonas aeruginosa clone FLH042737.01F PA2051 gene, partial cds Length = 954 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgtcgccgacgacgcggcgg 118 |||||||||||||||||||| Sbjct: 810 cgtcgccgacgacgcggcgg 829
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 57210 gtgcgtgcaggcgttcggcgccgaccag 57183
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 20697 gtgcgtgcaggcgttcggcgccgaccag 20670
>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence Length = 188138 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 95726 gagcgaggaaggaggtggtgatggggtc 95753
>ref|XM_817276.1| Trypanosoma brucei TREU927 kinesin (Tb10.70.6990) partial mRNA Length = 5397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gggcgatggggtccgtcgcc 105 |||||||||||||||||||| Sbjct: 3407 gggcgatggggtccgtcgcc 3426
>gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, complete sequence Length = 168159 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 128013 gagcgaggaaggaggtggtgatggggtc 128040
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcgccgccgcgtccatcgg 290 |||||||||||||||||||| Sbjct: 56926 ctcgccgccgcgtccatcgg 56907
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project) Length = 103270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcgccgccgcgtccatcgg 290 |||||||||||||||||||| Sbjct: 2608 ctcgccgccgcgtccatcgg 2589
>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII project) Length = 83029 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcgccgccgcgtccatcgg 290 |||||||||||||||||||| Sbjct: 55438 ctcgccgccgcgtccatcgg 55419
>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence Length = 157246 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 97454 gagcgaggaaggaggcggggatggggtc 97427
>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence Length = 175310 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 114858 gagcgaggaaggaggcggggatggggtc 114885 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 35929 gagcgaggaaggaggcggggatggggtc 35956
>gb|DQ158255.1| Synthetic construct chimeric Dengue envelope antigen 6E12 mRNA, partial cds Length = 1392 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 caccaccatcttcgtcggccacct 257 |||||||||||||| ||||||||| Sbjct: 870 caccaccatcttcgccggccacct 893
>gb|DQ158251.1| Synthetic construct chimeric Dengue envelope antigen 16B4 mRNA, partial cds Length = 1392 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 caccaccatcttcgtcggccacct 257 |||||||||||||| ||||||||| Sbjct: 870 caccaccatcttcgccggccacct 893
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 5728995 gagcgaggaaggaggtggtgatggggtc 5729022
>gb|AE005901.1| Caulobacter crescentus CB15 section 227 of 359 of the complete genome Length = 11136 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 gcgttcggcgccggccaggtggcc 390 ||||||||||||||||| |||||| Sbjct: 10738 gcgttcggcgccggccatgtggcc 10761
>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence Length = 193680 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 116032 gagcgaggaaggaggcggggatggggtc 116059 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 37103 gagcgaggaaggaggcggggatggggtc 37130
>gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, complete sequence Length = 137699 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 41994 gagcgaggaaggaggcggggatggggtc 42021
>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence Length = 148698 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 82332 gagcgaggaaggaggcggggatggggtc 82359
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgtcgccgacgacgcggcgg 118 |||||||||||||||||||| Sbjct: 749794 cgtcgccgacgacgcggcgg 749813
>gb|AC136704.9| Homo sapiens chromosome 15, clone RP11-671M22, complete sequence Length = 74342 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 69499 gagcgaggaaggaggcggggatggggtc 69472
>emb|AJ576283.1|HSA576283 Homo sapiens DNM1DN16.3 duplicon, map Yq11.23 Length = 1894 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 1590 gagcgaggaaggaggcggggatggggtc 1563
>emb|AJ576259.1|HSA576259 Homo sapiens DNM1DN11.3 duplicon, map 15q25.2 Length = 3282 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 3036 gagcgaggaaggaggcggggatggggtc 3009
>emb|AJ576253.1|HSA576253 Homo sapiens DNM1DN8.3 duplicon, map 15q24.2 Length = 1933 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 1441 gagcgaggaaggaggcggggatggggtc 1414
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 118435 gagcgaggaaggaggcggggatggggtc 118408
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 cctgcccctcgccgccgcgtccat 287 ||||||||||| |||||||||||| Sbjct: 2099961 cctgcccctcgtcgccgcgtccat 2099938
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 21041832 gtgcgtgcaggcgttcggcgccgaccag 21041805
>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence Length = 189557 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 51549 gagcgaggaaggaggcggggatggggtc 51522
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgtcgccgacgacgcggcg 117 |||||||||||||||||||| Sbjct: 105614 ccgtcgccgacgacgcggcg 105633
>emb|BX828329.1|CNS0A4AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1767 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ctcgccgccgcgtccatcgg 290 |||||||||||||||||||| Sbjct: 343 ctcgccgccgcgtccatcgg 362
>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence Length = 177769 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 89020 gagcgaggaaggaggcggggatggggtc 89047
>gb|AE004631.1| Pseudomonas aeruginosa PAO1, section 192 of 529 of the complete genome Length = 10864 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgtcgccgacgacgcggcgg 118 |||||||||||||||||||| Sbjct: 9423 cgtcgccgacgacgcggcgg 9442
>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence Length = 169605 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 145751 gagcgaggaaggaggcggggatggggtc 145778
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 3611371 gagcgaggaaggaggcggggatggggtc 3611398 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gagcgaggaaggagggggcgatggggtc 98 ||||||||||||||| || ||||||||| Sbjct: 2437000 gagcgaggaaggaggcggggatggggtc 2436973
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 gccggccaggtggccatgctcggc 399 |||||| ||||||||||||||||| Sbjct: 843524 gccggcgaggtggccatgctcggc 843501
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 6175 gtgcgcgcaggcgttcggcgccgaccag 6202
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 113120 gtgcgcgcaggcgttcggcgccgaccag 113147
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cggccaggtggccatgctcg 397 |||||||||||||||||||| Sbjct: 276671 cggccaggtggccatgctcg 276652
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 35263 ggggttcgtcgccgccgacgcggcggag 35290
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1423D04 Length = 154474 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 137652 ttcgtcggccacctcggcgagctccccctcgccggcgcttccat 137695 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 340 agcgcgctggagacgctgtgcgggcaggcgttcggc 375 ||||| ||||| || |||||||| |||||||||||| Sbjct: 111594 agcgcactggacaccctgtgcggccaggcgttcggc 111629 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 109354 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 109397
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 cctgcccctcgccgccgcgtccat 287 ||||||||||| |||||||||||| Sbjct: 25378 cctgcccctcgtcgccgcgtccat 25355
>dbj|AK106273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G11, full insert sequence Length = 1336 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 220 ggggttcgtcgccgccgacgcggcggag 193
>dbj|AK106334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F11, full insert sequence Length = 1256 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 221 ggggttcgtcgccgccgacgcggcggag 194
>gb|AF188287.1|AF188287 Stigmatella aurantiaca myxothiazol gene cluster, complete sequence Length = 42603 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cgccaccttcgccctcgggt 322 |||||||||||||||||||| Sbjct: 35878 cgccaccttcgccctcgggt 35859 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cgccaccttcgccctcgggt 322 |||||||||||||||||||| Sbjct: 24359 cgccaccttcgccctcgggt 24340
>dbj|AK070457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050C03, full insert sequence Length = 1470 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| ||||||||| |||| Sbjct: 381 ctggacacgctgtgcggccaggcgttcagcgc 412
>dbj|AK070330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049H21, full insert sequence Length = 1264 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 224 ggggttcgtcgccgccgacgcggcggag 197
>dbj|AK069792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K22, full insert sequence Length = 1903 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tggagacgctgtgcgggcaggcgt 370 |||| ||||||||||||||||||| Sbjct: 278 tggacacgctgtgcgggcaggcgt 301
>dbj|AK068840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160B01, full insert sequence Length = 1794 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 559 gtgcgcgcaggcgttcggcgccgaccag 586
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccaggtggccatgctcggcg 400 |||||||||||||||||||| Sbjct: 549730 ccaggtggccatgctcggcg 549749 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 gcaggcgttcggcgccggccaggt 386 ||||||||||| |||||||||||| Sbjct: 449810 gcaggcgttcgacgccggccaggt 449833
>dbj|AK067594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109D22, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 340 agcgcgctggagacgctgtgcgggcaggcgttcggc 375 ||||| ||||| || |||||||| |||||||||||| Sbjct: 500 agcgcactggacaccctgtgcggccaggcgttcggc 535 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 244 ttcgtcggccaccttggcaacctgcccctcgccgccgcgtccat 287 |||||||||||||| ||| | || |||||||||| ||| ||||| Sbjct: 404 ttcgtcggccacctcggcgagctccccctcgccggcgcctccat 447
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 gcgctggagacgctgtgcgggcaggcgt 370 |||| ||||||| ||||||||||||||| Sbjct: 489 gcgcaggagacggtgtgcgggcaggcgt 462
>dbj|AB084257.1| Cordyceps militaris genes for MAT1-2-1, DNA lyase, complete cds Length = 7780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 catcgccacgctcagcatgt 217 |||||||||||||||||||| Sbjct: 2788 catcgccacgctcagcatgt 2807
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 ggggtccgtcgccgacgacgcggcggag 120 ||||| |||||||| ||||||||||||| Sbjct: 59515 ggggttcgtcgccgccgacgcggcggag 59542
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 gtgcgggcaggcgttcggcgccggccag 384 ||||| ||||||||||||||||| |||| Sbjct: 44067 gtgcgcgcaggcgttcggcgccgaccag 44094 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,237,887 Number of Sequences: 3902068 Number of extensions: 2237887 Number of successful extensions: 58389 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56287 Number of HSP's gapped (non-prelim): 2099 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
