ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR... 29 5.1

>GFRA3_HUMAN (O60609) GDNF family receptor alpha-3 precursor (GFR-alpha-3)|
          Length = 400

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +2

Query: 2   VLFFLLSPSPS--VAGRPTPTTEREDNACLTHLVKQQRQQLC 121
           +L  LL PSP    AG P PT  R  N+CL    K Q    C
Sbjct: 16  MLLLLLPPSPLPLAAGDPLPTESRLMNSCLQARRKCQADPTC 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,555,212
Number of Sequences: 219361
Number of extensions: 482499
Number of successful extensions: 1967
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1966
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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