ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SUCA2_ARATH (Q8LAD2) Succinyl-CoA ligase [GDP-forming] alpha-cha... 153 2e-37
2SUCA1_ARATH (P68209) Succinyl-CoA ligase [GDP-forming] alpha-cha... 152 3e-37
3SUCA_PIG (O19069) Succinyl-CoA ligase [GDP-forming] alpha-chain,... 128 5e-30
4SUCA_RAT (P13086) Succinyl-CoA ligase [GDP-forming] alpha-chain,... 127 1e-29
5SUCA_MOUSE (Q9WUM5) Succinyl-CoA ligase [GDP-forming] alpha-chai... 126 2e-29
6SUCA_HUMAN (P53597) Succinyl-CoA ligase [GDP-forming] alpha-chai... 125 3e-29
7SUCA_DICDI (P36967) Succinyl-CoA ligase [GDP-forming] alpha-chai... 119 2e-27
8SUCD_RICPR (O08371) Succinyl-CoA synthetase alpha chain (EC 6.2.... 118 5e-27
9SUCD_COXBU (P53591) Succinyl-CoA synthetase alpha chain (EC 6.2.... 117 9e-27
10SUCA_DROME (Q94522) Succinyl-CoA ligase [GDP-forming] alpha-chai... 117 2e-26
11SUCD_ECOLI (P0AGE9) Succinyl-CoA synthetase alpha chain (EC 6.2.... 116 3e-26
12SUCD_ECOL6 (P0AGF0) Succinyl-CoA synthetase alpha chain (EC 6.2.... 116 3e-26
13SUCD_ECO57 (P0AGF1) Succinyl-CoA synthetase alpha chain (EC 6.2.... 116 3e-26
14SUCD_BACSU (P80865) Succinyl-CoA synthetase alpha chain (EC 6.2.... 112 3e-25
15SUCD_PSEAE (Q51567) Succinyl-CoA synthetase alpha chain (EC 6.2.... 112 4e-25
16SUCD_HAEIN (P45102) Succinyl-CoA synthetase alpha chain (EC 6.2.... 106 2e-23
17SUCA_SCHPO (O13750) Probable succinyl-CoA ligase [GDP-forming] a... 104 1e-22
18SUCD2_ARCFU (O28098) Succinyl-CoA synthetase alpha chain 2 (EC 6... 101 9e-22
19SUCD_AQUAE (O67547) Succinyl-CoA synthetase alpha chain (EC 6.2.... 100 1e-21
20SUCD_STAES (Q8CPH4) Succinyl-CoA synthetase alpha chain (EC 6.2.... 100 2e-21
21SUCD_STAEQ (Q5HPU4) Succinyl-CoA synthetase alpha chain (EC 6.2.... 100 2e-21
22SUCD_STAAW (Q8NX01) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
23SUCD_STAAS (Q6G9W7) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
24SUCD_STAAR (Q6GHI9) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
25SUCD_STAAN (P99070) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
26SUCD_STAAM (P66866) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
27SUCD_STAAC (Q5HGI6) Succinyl-CoA synthetase alpha chain (EC 6.2.... 99 3e-21
28SUCA_YEAST (P53598) Succinyl-CoA ligase [GDP-forming] alpha-chai... 99 4e-21
29SUCA_CAEEL (P53596) Probable succinyl-CoA ligase [GDP-forming] a... 97 2e-20
30MTKB_METEX (P53595) Malate--CoA ligase alpha chain (EC 6.2.1.9) ... 96 5e-20
31SUCD_METTH (O26663) Succinyl-CoA synthetase alpha chain (EC 6.2.... 96 5e-20
32SUCD1_ARCFU (O28733) Succinyl-CoA synthetase alpha chain 1 (EC 6... 95 6e-20
33SUCD_METJA (Q58643) Succinyl-CoA synthetase alpha chain (EC 6.2.... 94 1e-19
34SUCD_THETH (P09143) Succinyl-CoA synthetase alpha chain (EC 6.2.... 94 1e-19
35SUCA1_TRIVA (P53399) Succinyl-CoA ligase [GDP-forming] alpha-cha... 81 1e-15
36SUCA2_TRIVA (P53400) Succinyl-CoA ligase [GDP-forming] alpha-cha... 80 2e-15
37SUCA3_TRIVA (P53401) Succinyl-CoA ligase [GDP-forming] alpha-cha... 80 2e-15
38SUCD_MYCTU (P71558) Succinyl-CoA synthetase alpha chain (EC 6.2.... 74 1e-13
39SUCD_MYCBO (Q7U0Z0) Succinyl-CoA synthetase alpha chain (EC 6.2.... 74 1e-13
40CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell ... 29 4.1
41KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu... 29 5.4
42SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II) 29 5.4
43RCNA_ECOLI (P76425) Nickel/cobalt efflux system rcnA 29 5.4
44HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor 29 5.4
45CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor 29 5.4
46PKNX1_MOUSE (O70477) Homeobox protein PKNOX1 (PBX/knotted homeob... 28 7.1
47PKNX1_HUMAN (P55347) Homeobox protein PKNOX1 (PBX/knotted homeob... 28 7.1
48UVRB_MYCGE (P47319) UvrABC system protein B (Protein uvrB) (Exci... 28 9.2 
>SUCA2_ARATH (Q8LAD2) Succinyl-CoA ligase [GDP-forming] alpha-chain 2,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase 2, alpha chain) (SCS2-alpha)
          Length = 341

 Score =  153 bits (386), Expect = 2e-37
 Identities = 76/95 (80%), Positives = 80/95 (84%)
 Frame = +3

Query: 144 LHSRGYXXXXXXXXXVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTE 323
           + SR +         VFVDK+TRVICQGITGKNGTFHTEQAIEYGT MV GVTPKKGGTE
Sbjct: 32  VQSRSFGTTPPPPAAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTE 91

Query: 324 HLGLPVFNSVAEAKAETKANASXIYVPPPFAAAAI 428
           HLGLPVFN+VAEAKAETKANAS IYVP PFAAAAI
Sbjct: 92  HLGLPVFNTVAEAKAETKANASVIYVPAPFAAAAI 126
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>SUCA1_ARATH (P68209) Succinyl-CoA ligase [GDP-forming] alpha-chain 1,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase 1, alpha chain) (SCS1-alpha)
          Length = 347

 Score =  152 bits (384), Expect = 3e-37
 Identities = 75/93 (80%), Positives = 79/93 (84%)
 Frame = +3

Query: 150 SRGYXXXXXXXXXVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHL 329
           SR +         VFVDK+TRV+CQGITGKNGTFHTEQAIEYGT MV GVTPKKGGTEHL
Sbjct: 39  SRSFASDPHPPAAVFVDKNTRVLCQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGTEHL 98

Query: 330 GLPVFNSVAEAKAETKANASXIYVPPPFAAAAI 428
           GLPVFNSVAEAKA+TKANAS IYVP PFAAAAI
Sbjct: 99  GLPVFNSVAEAKADTKANASVIYVPAPFAAAAI 131
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>SUCA_PIG (O19069) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 350

 Score =  128 bits (322), Expect = 5e-30
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           ++VDK+T+VICQG TGK GTFH++QA+EYGTN+VGG TP KGG  HLGLPVFN+V EAK 
Sbjct: 37  LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKE 96

Query: 369 ETKANASXIYVPPPFAAAAI 428
           +T A AS IYVPPPFAAAAI
Sbjct: 97  QTGATASVIYVPPPFAAAAI 116
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>SUCA_RAT (P13086) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 333

 Score =  127 bits (318), Expect = 1e-29
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           +++DK+T+VICQG TGK GTFH++QA+EYGT +VGG TP KGG +HLGLPVFN+V EAK 
Sbjct: 37  IYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGKKHLGLPVFNTVKEAKE 96

Query: 369 ETKANASXIYVPPPFAAAAI 428
           +T A AS IYVPPPFAAAAI
Sbjct: 97  KTGATASVIYVPPPFAAAAI 116
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>SUCA_MOUSE (Q9WUM5) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 333

 Score =  126 bits (317), Expect = 2e-29
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           +++DK+T++ICQG TGK GTFH++QA+EYGT +VGG TP KGG +HLGLPVFN+V EAK 
Sbjct: 37  IYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQKHLGLPVFNTVKEAKE 96

Query: 369 ETKANASXIYVPPPFAAAAI 428
           +T A AS IYVPPPFAAAAI
Sbjct: 97  KTGATASVIYVPPPFAAAAI 116
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>SUCA_HUMAN (P53597) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 333

 Score =  125 bits (315), Expect = 3e-29
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           ++VDK+T++ICQG TGK GTFH++QA+EYGT +VGG TP KGG  HLGLPVFN+V EAK 
Sbjct: 37  LYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKE 96

Query: 369 ETKANASXIYVPPPFAAAAI 428
           +T A AS IYVPPPFAAAAI
Sbjct: 97  QTGATASVIYVPPPFAAAAI 116
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>SUCA_DICDI (P36967) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 310

 Score =  119 bits (299), Expect = 2e-27
 Identities = 56/80 (70%), Positives = 66/80 (82%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           V ++K+T+VICQG TG  GTFH++QAIEYGTNMVGGV+P KGG +HL LP FN+V EAK 
Sbjct: 22  VLINKNTKVICQGFTGNQGTFHSKQAIEYGTNMVGGVSPGKGGQKHLDLPAFNTVKEAKE 81

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T ANA+ IYVPPP AAAAI
Sbjct: 82  ATGANATVIYVPPPHAAAAI 101
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>SUCD_RICPR (O08371) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 292

 Score =  118 bits (296), Expect = 5e-27
 Identities = 56/80 (70%), Positives = 65/80 (81%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + ++K T+VICQG TG  GTFH+EQAI YGTNMVGGVTP KGG  HL LPV+N+V EAKA
Sbjct: 3   ILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKA 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           +T ANAS IYVPP FAA +I
Sbjct: 63  KTGANASVIYVPPGFAADSI 82
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>SUCD_COXBU (P53591) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 294

 Score =  117 bits (294), Expect = 9e-27
 Identities = 54/80 (67%), Positives = 63/80 (78%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +DK TRV+CQG TGK GTFH+EQAIEYGT MVGGVTP KGG  HLGLP+FNSV EA  
Sbjct: 3   ILIDKETRVLCQGFTGKQGTFHSEQAIEYGTQMVGGVTPGKGGQSHLGLPIFNSVHEAVE 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A+A+ I+VP PF   +I
Sbjct: 63  ETSADATMIFVPAPFCKDSI 82
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>SUCA_DROME (Q94522) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 328

 Score =  117 bits (292), Expect = 2e-26
 Identities = 54/74 (72%), Positives = 64/74 (86%)
 Frame = +3

Query: 207 TRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANA 386
           +RVICQG TGK GTFH++QA+EYGT +VGG++PKKGGT+HLGLPVF SVAEAK  T  +A
Sbjct: 38  SRVICQGFTGKQGTFHSQQALEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHA 97

Query: 387 SXIYVPPPFAAAAI 428
           + IYVPPP AAAAI
Sbjct: 98  TVIYVPPPGAAAAI 111
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>SUCD_ECOLI (P0AGE9) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 288

 Score =  116 bits (290), Expect = 3e-26
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +DK+T+VICQG TG  GTFH+EQAI YGT MVGGVTP KGGT HLGLPVFN+V EA A
Sbjct: 2   ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVA 61

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T A AS IYVP PF   +I
Sbjct: 62  ATGATASVIYVPAPFCKDSI 81
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>SUCD_ECOL6 (P0AGF0) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 288

 Score =  116 bits (290), Expect = 3e-26
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +DK+T+VICQG TG  GTFH+EQAI YGT MVGGVTP KGGT HLGLPVFN+V EA A
Sbjct: 2   ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVA 61

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T A AS IYVP PF   +I
Sbjct: 62  ATGATASVIYVPAPFCKDSI 81
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>SUCD_ECO57 (P0AGF1) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 288

 Score =  116 bits (290), Expect = 3e-26
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +DK+T+VICQG TG  GTFH+EQAI YGT MVGGVTP KGGT HLGLPVFN+V EA A
Sbjct: 2   ILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVA 61

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T A AS IYVP PF   +I
Sbjct: 62  ATGATASVIYVPAPFCKDSI 81
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>SUCD_BACSU (P80865) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha) (Vegetative protein 239) (VEG239)
          Length = 299

 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF++K TRVI QGITG    FHT+Q +EYGTN+VGGVTP KGGTE  G+PVFN+VAEA  
Sbjct: 2   VFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEGVPVFNTVAEAVQ 61

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T ANAS IYVP PFAA AI
Sbjct: 62  TTGANASVIYVPAPFAADAI 81
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>SUCD_PSEAE (Q51567) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 295

 Score =  112 bits (280), Expect = 4e-25
 Identities = 54/80 (67%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           V ++K T+VICQG TG  GTFH+EQAI YGT MVGGVTP KGGT HLGLPVFN+V EA  
Sbjct: 3   VLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEAVE 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T A AS IYVP PF   +I
Sbjct: 63  ATGAEASVIYVPAPFCKDSI 82
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>SUCD_HAEIN (P45102) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 293

 Score =  106 bits (265), Expect = 2e-23
 Identities = 49/80 (61%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +DK+T+VICQG TG  GTFH+EQA+ YGT +VGGV+P KGGT HLGLPVFN+V EA  
Sbjct: 3   ILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVE 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T   A+ IYVP  F   AI
Sbjct: 63  NTGVTATVIYVPASFCKDAI 82
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>SUCA_SCHPO (O13750) Probable succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 331

 Score =  104 bits (259), Expect = 1e-22
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + ++  T+VI QG TGK GTFH + A++YGT +VGG  PKK GT HLG PVF ++ EA  
Sbjct: 35  LMINSDTKVIFQGFTGKQGTFHAQHAMDYGTKVVGGTNPKKAGTTHLGKPVFGTIEEAMK 94

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ETKA+AS ++VPPP AA AI
Sbjct: 95  ETKADASAVFVPPPLAAGAI 114
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>SUCD2_ARCFU (O28098) Succinyl-CoA synthetase alpha chain 2 (EC 6.2.1.5)|
           (SCS-alpha 2)
          Length = 287

 Score =  101 bits (251), Expect = 9e-22
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + VD+ T+V+ QGITG  G FHTE+ + YGT +V GVTP KGGTE LG+PV++SV EA  
Sbjct: 3   IIVDERTKVVVQGITGYQGKFHTERMLNYGTKIVAGVTPGKGGTEVLGVPVYDSVKEAVR 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           E  ANAS I+VP PFAA A+
Sbjct: 63  EADANASVIFVPAPFAADAV 82
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>SUCD_AQUAE (O67547) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 305

 Score =  100 bits (250), Expect = 1e-21
 Identities = 49/80 (61%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + V+K T+V+ QGITGK G+FH +Q  EYGT +V GVTP KGG E  G+PVFN+V EA  
Sbjct: 3   ILVNKDTKVVVQGITGKEGSFHAKQCKEYGTQVVAGVTPGKGGMEVEGIPVFNTVKEAVK 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET AN S I+VP PFAA AI
Sbjct: 63  ETGANCSLIFVPAPFAADAI 82
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>SUCD_STAES (Q8CPH4) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score =  100 bits (248), Expect = 2e-21
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PV+N+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET AN S +YVP PFAA +I
Sbjct: 63  ETGANVSVVYVPAPFAADSI 82
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>SUCD_STAEQ (Q5HPU4) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score =  100 bits (248), Expect = 2e-21
 Identities = 47/80 (58%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PV+N+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET AN S +YVP PFAA +I
Sbjct: 63  ETGANVSVVYVPAPFAADSI 82
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>SUCD_STAAW (Q8NX01) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCD_STAAS (Q6G9W7) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCD_STAAR (Q6GHI9) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCD_STAAN (P99070) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCD_STAAM (P66866) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCD_STAAC (Q5HGI6) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 302

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           VF+DK+T+V+ QGITG    FHT+Q ++YGT +V GVTP KGG    G+PVFN+V EAK 
Sbjct: 3   VFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKN 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A  S IYVP PFAA +I
Sbjct: 63  ETGATVSVIYVPAPFAADSI 82
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>SUCA_YEAST (P53598) Succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 329

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 49/80 (61%), Positives = 56/80 (70%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + + K T+VI QG TGK GTFH   + EYGTN+VGG  PKK G  HLG PVF SV +A  
Sbjct: 31  LLLPKDTKVIFQGFTGKQGTFHASISQEYGTNVVGGTNPKKAGQTHLGQPVFASVKDAIK 90

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A AS I+VPPP AAAAI
Sbjct: 91  ETGATASAIFVPPPIAAAAI 110
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>SUCA_CAEEL (P53596) Probable succinyl-CoA ligase [GDP-forming] alpha-chain,|
           mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA
           synthetase, alpha chain) (SCS-alpha)
          Length = 322

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 46/78 (58%), Positives = 58/78 (74%)
 Frame = +3

Query: 195 VDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAET 374
           ++K T+VI QG TGK GTFH +Q +EY T +VGGV   K GTEHLGLPVF +V+EA+ +T
Sbjct: 30  INKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKT 89

Query: 375 KANASXIYVPPPFAAAAI 428
            A+AS IYVP   A +AI
Sbjct: 90  GADASVIYVPASAAGSAI 107
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>MTKB_METEX (P53595) Malate--CoA ligase alpha chain (EC 6.2.1.9) (Malyl-CoA|
           synthetase) (Malate thiokinase) (MTK-alpha)
          Length = 260

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 44/80 (55%), Positives = 56/80 (70%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +D+ T ++ QGITG  GTFH ++ I YG+N+VGGVTP KGG  H G+PVFN+V EA  
Sbjct: 3   ILIDEKTPILVQGITGDKGTFHAKEMIAYGSNVVGGVTPGKGGKTHCGVPVFNTVKEAVE 62

Query: 369 ETKANASXIYVPPPFAAAAI 428
            T A  S  +V PPFAA AI
Sbjct: 63  ATGATTSITFVAPPFAADAI 82
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>SUCD_METTH (O26663) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 293

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 45/79 (56%), Positives = 55/79 (69%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +D+ TR + QGITGK G+FHT Q +EYGT +V GVTP KGG E LG+ V+NSV E   
Sbjct: 7   ILLDEDTRCLVQGITGKQGSFHTRQMLEYGTRIVAGVTPGKGGQEFLGVDVYNSVEEVTE 66

Query: 369 ETKANASXIYVPPPFAAAA 425
           E   NAS I+VP PFA  A
Sbjct: 67  EMDVNASIIFVPAPFAKDA 85
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>SUCD1_ARCFU (O28733) Succinyl-CoA synthetase alpha chain 1 (EC 6.2.1.5)|
           (SCS-alpha 1)
          Length = 291

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 46/80 (57%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + VD++TRVI QGITG  G+F  ++ ++YGT +VGGVTP KGG+E  G+PV+N+V EA A
Sbjct: 6   ILVDENTRVIVQGITGFQGSFQAKRMLDYGTKVVGGVTPGKGGSEVHGIPVYNTVEEAVA 65

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET A+ S IYVP  FA  AI
Sbjct: 66  ETNADTSIIYVPARFATDAI 85
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>SUCD_METJA (Q58643) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 294

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 44/80 (55%), Positives = 60/80 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + +D++T+ I QGITG+ G+FHT++ +E GT +VGGVTP KGG    G+PVF++V EA  
Sbjct: 8   ILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVK 67

Query: 369 ETKANASXIYVPPPFAAAAI 428
           ET ANAS I+VP PFA  A+
Sbjct: 68  ETDANASVIFVPAPFAKDAV 87
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>SUCD_THETH (P09143) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 288

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 44/79 (55%), Positives = 60/79 (75%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           + V++ TRV+ QGITG+ G FHT+Q ++YGT +V GVTP KGGTE LG+PV+++V EA A
Sbjct: 2   ILVNRETRVLVQGITGREGQFHTKQMLDYGTKIVAGVTPGKGGTEVLGVPVYDTVKEAVA 61

Query: 369 ETKANASXIYVPPPFAAAA 425
             + +AS I+VP P AA A
Sbjct: 62  HHEVDASIIFVPAPAAADA 80
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>SUCA1_TRIVA (P53399) Succinyl-CoA ligase [GDP-forming] alpha-chain 1 precursor|
           (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 1)
          Length = 309

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 41/79 (51%), Positives = 52/79 (65%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKA 368
           +F+DK T+V+ QGI G  G FH+    +YGT +VG V PKK GT   GLP+F ++ E   
Sbjct: 15  LFIDKDTKVVIQGI-GNQGQFHSRLMRQYGTKVVGAVHPKKAGTIIAGLPIFKNMKEVVK 73

Query: 369 ETKANASXIYVPPPFAAAA 425
            T ANAS I+VP P AAAA
Sbjct: 74  RTDANASLIFVPAPGAAAA 92
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>SUCA2_TRIVA (P53400) Succinyl-CoA ligase [GDP-forming] alpha-chain 2 precursor|
           (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 2)
          Length = 309

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 47/103 (45%), Positives = 58/103 (56%)
 Frame = +3

Query: 117 MLGSAASRFLHSRGYXXXXXXXXXVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGG 296
           ML S+  R LH             +F+DK TRV+ QGI G  G +H+    EYGT +VG 
Sbjct: 1   MLSSSFERNLHQP----------LLFIDKDTRVVIQGI-GNQGQYHSRLMREYGTKVVGA 49

Query: 297 VTPKKGGTEHLGLPVFNSVAEAKAETKANASXIYVPPPFAAAA 425
           V PKK G    GLP+F ++ E    T ANAS I+VP P AAAA
Sbjct: 50  VHPKKAGKIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAA 92
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>SUCA3_TRIVA (P53401) Succinyl-CoA ligase [GDP-forming] alpha-chain 3 precursor|
           (EC 6.2.1.4) (Succinyl-CoA synthetase, alpha chain 3)
          Length = 309

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 46/103 (44%), Positives = 59/103 (57%)
 Frame = +3

Query: 117 MLGSAASRFLHSRGYXXXXXXXXXVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGG 296
           ML S+  R LH             +F+DK T+V+ QGI G  G FH+    +YGT +VG 
Sbjct: 1   MLSSSFERNLHQP----------LLFIDKDTKVVIQGI-GNQGQFHSRLMRQYGTKVVGA 49

Query: 297 VTPKKGGTEHLGLPVFNSVAEAKAETKANASXIYVPPPFAAAA 425
           V PKK G+   GLP+F ++ E    T ANAS I+VP P AAAA
Sbjct: 50  VHPKKAGSIIAGLPIFKNMKEVVKRTDANASLIFVPAPGAAAA 92
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>SUCD_MYCTU (P71558) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 303

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGT---------EHLGLPV 341
           +F+ +  +VI QGITG   T HT + +  GT +VGGV  +K GT           + LPV
Sbjct: 6   IFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPV 65

Query: 342 FNSVAEAKAETKANASXIYVPPPFAAAAI 428
           F SVAEA  +T A+ S I+VPP FA  AI
Sbjct: 66  FGSVAEAMEKTGADVSIIFVPPTFAKDAI 94
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>SUCD_MYCBO (Q7U0Z0) Succinyl-CoA synthetase alpha chain (EC 6.2.1.5)|
           (SCS-alpha)
          Length = 303

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = +3

Query: 189 VFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGT---------EHLGLPV 341
           +F+ +  +VI QGITG   T HT + +  GT +VGGV  +K GT           + LPV
Sbjct: 6   IFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPV 65

Query: 342 FNSVAEAKAETKANASXIYVPPPFAAAAI 428
           F SVAEA  +T A+ S I+VPP FA  AI
Sbjct: 66  FGSVAEAMEKTGADVSIIFVPPTFAKDAI 94
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>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface|
           antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte
           receptor) (Rosette receptor)
          Length = 351

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 203 EHPRDLPGHHREE-RHLPHRAGHRVRHQ 283
           +HP   PGH  +   H P   GHRV+HQ
Sbjct: 280 QHPPPPPGHRSQAPSHRPPPPGHRVQHQ 307
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>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 203 EHPRDLPGHHREERHLPHRAGHRVRHQH 286
           EH      HH  +   PH+A H+  H H
Sbjct: 62  EHHHHHHHHHHHQHQAPHQAPHQAHHHH 89
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>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 303 PKKGGTEHLGLPVFNSVAEAKAETKANASXIYVPPPFAAAA 425
           P+   T  +G   F+S+++A  +T A+A  +  P P  AAA
Sbjct: 70  PQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
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>RCNA_ECOLI (P76425) Nickel/cobalt efflux system rcnA|
          Length = 274

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 206 HPRDLPGHHREERHLPHRAGHRVRHQHGRWSYSQER 313
           H  D   HH +  H  H  GH   H+HG +  +  R
Sbjct: 121 HGHDYEHHHHDHEH-HHDHGHHHHHEHGEYQDAHAR 155
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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 200 QEHPRDLPGHHREERHLPHRAGHRVRHQH 286
           + H  +   HH EE H PH   H   H H
Sbjct: 71  EPHHEEHHHHHPEEHHEPHHEEHHHHHPH 99
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>CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor|
          Length = 351

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 203 EHPRDLPGHHREE-RHLPHRAGHRVRHQ 283
           +HP   PGH  +   H P   GHRV+HQ
Sbjct: 280 QHPPPPPGHRSQAPSHRPLPPGHRVQHQ 307
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>PKNX1_MOUSE (O70477) Homeobox protein PKNOX1 (PBX/knotted homeobox 1)|
          Length = 435

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 352 TELKTGR-PRCSVPPFLGVTPPTMLVPYSMAC---SVWKVPFFPVM 227
           TELKT + P CS P   GV+PP +     M     ++++ P FP++
Sbjct: 21  TELKTEQDPNCSDPDAEGVSPPPIESQTPMDADKQAIYRHPLFPLL 66
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>PKNX1_HUMAN (P55347) Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox|
           protein PREP-1)
          Length = 435

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 352 TELKTGR-PRCSVPPFLGVTPPTMLVPYSMAC---SVWKVPFFPVM 227
           TELKT + P CS P   GV+PP +     M     ++++ P FP++
Sbjct: 21  TELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLL 66
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>UVRB_MYCGE (P47319) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 656

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 215 DLPGHHREERHLPHRAGHRVRHQHGR 292
           D+PG  R+ER L    G   R++HGR
Sbjct: 527 DIPGLPRDERSLIQIIGRAARNEHGR 552


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,021,058
Number of Sequences: 219361
Number of extensions: 872303
Number of successful extensions: 3040
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3021
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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