| Clone Name | bast63h05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 996 Score = 458 bits (231), Expect = e-126 Identities = 319/349 (91%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 87 atggccgcctcctcccgccgcgcgtcccagatgctgggctccgccgcctcccgcttcctc 146 |||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||| Sbjct: 1 atggccgcctccgcccgccgcgcgtcccagctgctgggatccgcggcctcccgcctcctc 60 Query: 147 cattcgcggggctacgcggc------cgccgccgcgccctcgccggcggtgttcgtcgac 200 || ||||||||| |||||| ||| |||||||| ||||||||||||||||| ||| Sbjct: 61 cacgcgcggggcttcgcggcggcggccgcggccgcgccgtcgccggcggtgttcgtggac 120 Query: 201 aagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgag 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgag 180 Query: 261 caggccatcgagtacggcaccaacatggtaggtggagttactcccaagaaaggtggaact 320 |||||||||||||||||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 181 caggccatcgagtacggcaccaccatggtaggtggggttacccctaagaaaggtggaacc 240 Query: 321 gagcacctaggccttccagttttcaactcagtagcagaagctaaggccgagacaaaggcc 380 ||||||||||||||||| || |||||||| || |||||||||||||| ||||||||||| Sbjct: 241 gagcacctaggccttccggtgttcaactctgtggcagaagctaaggctgagacaaaggcg 300 Query: 381 aatgcatctngtatatatgttccaccaccatttgctgctgctgcaataa 429 ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 301 aatgcatctgttatatatgttccaccaccatttgctgctgctgcaataa 349
>gb|AY104319.1| Zea mays PCO131533 mRNA sequence Length = 1619 Score = 410 bits (207), Expect = e-111 Identities = 316/353 (89%), Gaps = 6/353 (1%) Strand = Plus / Plus Query: 83 cgccatggccgcctcctcccgccgcgcgtcccagatgctgggctccgccgcctcccgctt 142 |||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||| Sbjct: 152 cgccatggccgcctcctcccgccgcgcgtctcaattgctggggtccgcggcctcccgctt 211 Query: 143 cctccattcgcggggctacgc------ggccgccgccgcgccctcgccggcggtgttcgt 196 ||||| |||||||| ||| ||||||||||||||||||||||||||| ||||| Sbjct: 212 cctcctcgggcggggcttcgccgcggcggccgccgccgcgccctcgccggcggtcttcgt 271 Query: 197 cgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacac 256 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 272 cgacaagagcacccgcgtgatctgccagggcatcacggggaagaacggcaccttccacac 331 Query: 257 cgagcaggccatcgagtacggcaccaacatggtaggtggagttactcccaagaaaggtgg 316 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 332 cgagcaggccatcgagtacggcaccaacatggttggtggagtgactcccaagaaaggtgg 391 Query: 317 aactgagcacctaggccttccagttttcaactcagtagcagaagctaaggccgagacaaa 376 |||||| || |||| || ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 392 aactgaacatttagggctcccagtgtttaactctgtagcagaagctaaggctgaaacaaa 451 Query: 377 ggccaatgcatctngtatatatgttccaccaccatttgctgctgctgcaataa 429 ||||||||| || |||||||||||||||||||||||| || ||||| |||| Sbjct: 452 agccaatgcaactgttatatatgttccaccaccatttgccgccgctgctataa 504
>dbj|D10415.1|RIC475 Oryza sativa mRNA for succinyl-CoA sythetase (475 gene), partial sequence Length = 486 Score = 351 bits (177), Expect = 1e-93 Identities = 215/228 (94%) Strand = Plus / Plus Query: 202 agagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgagc 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgagc 60 Query: 262 aggccatcgagtacggcaccaacatggtaggtggagttactcccaagaaaggtggaactg 321 ||||||||||||||||||||| |||||||||||| ||||| || |||||||||||||| | Sbjct: 61 aggccatcgagtacggcaccaccatggtaggtggggttacccctaagaaaggtggaaccg 120 Query: 322 agcacctaggccttccagttttcaactcagtagcagaagctaaggccgagacaaaggcca 381 |||||||||||||||| || |||||||| || |||||||||||||| ||||||||||| | Sbjct: 121 agcacctaggccttccggtgttcaactctgtggcagaagctaaggctgagacaaaggcga 180 Query: 382 atgcatctngtatatatgttccaccaccatttgctgctgctgcaataa 429 |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 181 atgcatctgttatatatgttccaccaccatttgctgctgctgcaataa 228
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 280 bits (141), Expect = 4e-72 Identities = 194/212 (91%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 85 ccatggccgcctcctcccgccgcgcgtcccagatgctgggctccgccgcctcccgcttcc 144 |||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||| Sbjct: 23307698 ccatggccgcctccgcccgccgcgcgtcccagctgctgggatccgcggcctcccgcctcc 23307757 Query: 145 tccattcgcggggctacgcggc------cgccgccgcgccctcgccggcggtgttcgtcg 198 |||| ||||||||| |||||| ||| |||||||| ||||||||||||||||| | Sbjct: 23307758 tccacgcgcggggcttcgcggcggcggccgcggccgcgccgtcgccggcggtgttcgtgg 23307817 Query: 199 acaagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23307818 acaagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccg 23307877 Query: 259 agcaggccatcgagtacggcaccaacatggta 290 |||||||||||||||||||||||| ||||||| Sbjct: 23307878 agcaggccatcgagtacggcaccaccatggta 23307909 Score = 190 bits (96), Expect = 3e-45 Identities = 131/143 (91%) Strand = Plus / Plus Query: 287 ggtaggtggagttactcccaagaaaggtggaactgagcacctaggccttccagttttcaa 346 ||||||||| ||||| || |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 23309273 ggtaggtggggttacccctaagaaaggtggaaccgagcacctaggccttccggtgttcaa 23309332 Query: 347 ctcagtagcagaagctaaggccgagacaaaggccaatgcatctngtatatatgttccacc 406 ||| || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||| Sbjct: 23309333 ctctgtggcagaagctaaggctgagacaaaggcgaatgcatctgttatatatgttccacc 23309392 Query: 407 accatttgctgctgctgcaataa 429 ||||||||||||||||||||||| Sbjct: 23309393 accatttgctgctgctgcaataa 23309415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 14 ccccaaacgaaatcgaatcgagaggaga 41 |||||||||||||||||||||||||||| Sbjct: 23307618 ccccaaacgaaatcgaatcgagaggaga 23307645 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ctccgccgcctcccgcttcctc 146 |||||||||||||||||||||| Sbjct: 29285804 ctccgccgcctcccgcttcctc 29285825 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||| |||||||||||| Sbjct: 657898 gccgccgccgcggcctcgccggcgg 657874
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 280 bits (141), Expect = 4e-72 Identities = 194/212 (91%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 85 ccatggccgcctcctcccgccgcgcgtcccagatgctgggctccgccgcctcccgcttcc 144 |||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||| Sbjct: 62956 ccatggccgcctccgcccgccgcgcgtcccagctgctgggatccgcggcctcccgcctcc 63015 Query: 145 tccattcgcggggctacgcggc------cgccgccgcgccctcgccggcggtgttcgtcg 198 |||| ||||||||| |||||| ||| |||||||| ||||||||||||||||| | Sbjct: 63016 tccacgcgcggggcttcgcggcggcggccgcggccgcgccgtcgccggcggtgttcgtgg 63075 Query: 199 acaagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63076 acaagagcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccg 63135 Query: 259 agcaggccatcgagtacggcaccaacatggta 290 |||||||||||||||||||||||| ||||||| Sbjct: 63136 agcaggccatcgagtacggcaccaccatggta 63167 Score = 190 bits (96), Expect = 3e-45 Identities = 131/143 (91%) Strand = Plus / Plus Query: 287 ggtaggtggagttactcccaagaaaggtggaactgagcacctaggccttccagttttcaa 346 ||||||||| ||||| || |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 64531 ggtaggtggggttacccctaagaaaggtggaaccgagcacctaggccttccggtgttcaa 64590 Query: 347 ctcagtagcagaagctaaggccgagacaaaggccaatgcatctngtatatatgttccacc 406 ||| || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||| Sbjct: 64591 ctctgtggcagaagctaaggctgagacaaaggcgaatgcatctgttatatatgttccacc 64650 Query: 407 accatttgctgctgctgcaataa 429 ||||||||||||||||||||||| Sbjct: 64651 accatttgctgctgctgcaataa 64673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 14 ccccaaacgaaatcgaatcgagaggaga 41 |||||||||||||||||||||||||||| Sbjct: 62876 ccccaaacgaaatcgaatcgagaggaga 62903
>gb|AY167586.1| Lycopersicon esculentum succinyl-CoA ligase alpha 1 subunit (SCOA) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1164 Score = 133 bits (67), Expect = 5e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 181 cgccggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaaga 240 ||||||| |||||||| || |||| ||| || || ||||| || ||||| || ||||||| Sbjct: 171 cgccggctgtgttcgttgataagaacacacgtgtcatctgtcaaggcattacagggaaga 230 Query: 241 acggcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagtta 300 |||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||||| | Sbjct: 231 acggtaccttccataccgagcaggccatcgagtatggcaccaaaatggttggtggagtga 290 Query: 301 ctcccaagaaaggtggaactgagcacctaggccttccagttttcaac 347 | |||||||| |||||||| || ||| |||| ||||| || |||||| Sbjct: 291 cacccaagaagggtggaacagaacacttaggtcttcctgtcttcaac 337
>ref|NM_120913.3| Arabidopsis thaliana catalytic/ succinate-CoA ligase (GDP-forming) AT5G08300 mRNA, complete cds Length = 1398 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 258 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 317 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 318 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 377 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 378 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 437 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 438 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 497 Query: 424 c 424 | Sbjct: 498 c 498
>emb|AJ001807.1|ATSCLAS Arabidopsis thaliana mRNA for Succinyl-CoA-ligase alpha subunit Length = 1153 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 207 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 266 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 267 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 326 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 327 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 386 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 387 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 446 Query: 424 c 424 | Sbjct: 447 c 447
>gb|AY114613.1| Arabidopsis thaliana succinyl-CoA-ligase alpha subunit (At5g08300) mRNA, complete cds Length = 1167 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 149 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 208 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 209 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 268 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 269 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 328 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 329 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 388 Query: 424 c 424 | Sbjct: 389 c 389
>gb|AY072333.1| Arabidopsis thaliana succinyl-CoA-ligase alpha subunit (At5g08300) mRNA, complete cds Length = 1285 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 225 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 284 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 285 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 344 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 345 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 404 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 405 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 464 Query: 424 c 424 | Sbjct: 465 c 465
>emb|BX830929.1|CNS09ZGH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1326 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 212 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 271 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 272 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 331 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 332 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 391 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 392 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 451 Query: 424 c 424 | Sbjct: 452 c 452
>gb|AY084298.1| Arabidopsis thaliana clone 10292 mRNA, complete sequence Length = 1299 Score = 115 bits (58), Expect = 1e-22 Identities = 195/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 228 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 287 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| |||||||||||||| ||||| | ||||| || | Sbjct: 288 gcactttccacactgaacaagccattgagtacggcaccaaaatggtggcaggagtgacac 347 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 348 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 407 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 408 aggctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctg 467 Query: 424 c 424 | Sbjct: 468 c 468
>gb|DQ235193.1| Solanum tuberosum clone 167F09 succinyl-CoA ligase alpha 1 subunit-like mRNA, complete cds Length = 1389 Score = 109 bits (55), Expect = 7e-21 Identities = 118/139 (84%) Strand = Plus / Plus Query: 181 cgccggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaaga 240 ||||||| |||||||| || |||| ||| || || ||||| || ||||| || ||||||| Sbjct: 186 cgccggctgtgttcgttgataagaacacacgtgtcatctgtcaaggcattacggggaaga 245 Query: 241 acggcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagtta 300 |||| |||||||| ||||||||||||||||| || ||||| || ||||| |||||||| | Sbjct: 246 acggtaccttccataccgagcaggccatcgaatatggcactaaaatggttggtggagtga 305 Query: 301 ctcccaagaaaggtggaac 319 | |||||||| |||||||| Sbjct: 306 cacccaagaagggtggaac 324
>emb|BX831587.1|CNS09YP8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 107 bits (54), Expect = 3e-20 Identities = 194/241 (80%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 259 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 318 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactc 303 |||| |||||||| || || ||||| ||||||||||||| ||||| | ||||| || | Sbjct: 319 gcactttccacactgaacaagccattaagtacggcaccaaaatggtggcaggagtaacac 378 Query: 304 ccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagcta 363 | ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||| Sbjct: 379 cgaagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagcta 438 Query: 364 aggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctg 423 |||| || || || |||||||| ||| || |||||||| | || ||||||||||||| Sbjct: 439 aggctgacaccaaagccaatgcctctgtaatttatgttcctgctccttttgctgctgctg 498 Query: 424 c 424 | Sbjct: 499 c 499
>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence Length = 131960 Score = 105 bits (53), Expect = 1e-19 Identities = 199/248 (80%) Strand = Plus / Minus Query: 177 ccctcgccggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccggg 236 ||||| |||||||||||||||||||| ||||| ||||||||||| || || || || || Sbjct: 56611 ccctctccggcggtgttcgtcgacaaaagcacacgcgtgatctgtcaaggaataacaggc 56552 Query: 237 aagaacggcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtgga 296 || ||||| || || |||||||| || || ||||| || || || || ||||| ||||| Sbjct: 56551 aaaaacggaacgtttcacaccgaacaagcgatcgaatatggaacgaatatggttggtggt 56492 Query: 297 gttactcccaagaaaggtggaactgagcacctaggccttccagttttcaactcagtagca 356 |||||||| |||||||||||||| || || |||| ||||| |||||||| || || || Sbjct: 56491 gttactccgaagaaaggtggaacggaacatttagggcttccggttttcaattctgttgcg 56432 Query: 357 gaagctaaggccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgct 416 ||||| || | || || || || ||||| ||| ||| |||||||| || || |||||| Sbjct: 56431 gaagcgaaaactgaaacgaaagcgaatgcttctgttatttatgttcctcctccttttgct 56372 Query: 417 gctgctgc 424 |||||||| Sbjct: 56371 gctgctgc 56364
>ref|NM_122231.2| Arabidopsis thaliana catalytic/ succinate-CoA ligase (GDP-forming) AT5G23250 mRNA, complete cds Length = 1449 Score = 83.8 bits (42), Expect = 4e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 237 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 296 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 297 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 356 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 357 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 406
>emb|X69138.1|ATSCOALA A.thaliana mRNA for succinate--CoA ligase (GCP-forming) Length = 1393 Score = 83.8 bits (42), Expect = 4e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 179 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 238 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 239 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 298 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 299 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 348
>gb|AY114607.1| Arabidopsis thaliana succinyl-CoA synthetase alpha subunit (At5g23250) mRNA, complete cds Length = 1119 Score = 83.8 bits (42), Expect = 4e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 166 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 225 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 226 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 285 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 286 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 335
>gb|AY092994.1| Arabidopsis thaliana succinyl-CoA synthetase, alpha subunit (At5g23250) mRNA, complete cds Length = 1234 Score = 83.8 bits (42), Expect = 4e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 177 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 236 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 237 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 296 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 297 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 346
>gb|AY087899.1| Arabidopsis thaliana clone 39462 mRNA, complete sequence Length = 1345 Score = 83.8 bits (42), Expect = 4e-13 Identities = 138/170 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 237 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 296 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 297 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 356 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 357 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 406
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 184 cggcggtgttcgtcgacaagagcacccgcgtgatctgccagggcatcaccgggaagaacg 243 ||||||| ||||| ||||| | ||| || || |||| || ||||||||||| ||||||| Sbjct: 31545 cggcggttttcgttgacaaaaacacacgagtcctctgtcaaggcatcaccggaaagaacg 31604 Query: 244 gcaccttccacaccgagcaggccatcgagtacggcaccaacatggta 290 |||| |||||||| || || ||||| |||||||||||||| |||||| Sbjct: 31605 gcactttccacactgaacaagccattgagtacggcaccaaaatggta 31651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 306 aagaaaggtggaactgagcacctaggccttccagttttcaactcagtagcagaagctaag 365 ||||| |||||||| || ||| | || || |||||||||||||| || || ||||||||| Sbjct: 31884 aagaagggtggaacagaacacttgggtctcccagttttcaactctgttgctgaagctaag 31943 Query: 366 gccgagacaaaggccaatgcatctngtatatatgttccaccaccatttgctgctgctgc 424 || || || || |||||||| ||| || |||||||| | || |||||||||||||| Sbjct: 31944 gctgacaccaaagccaatgcctctgtgatttatgttcctgctccttttgctgctgctgc 32002
>gb|BT012809.1| Lycopersicon esculentum clone 113829R, mRNA sequence Length = 1311 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 206 cacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 ||||||||| || || || ||||||||||| || |||||||| |||||||| || ||||| Sbjct: 196 cacccgcgtcatatgtcaaggcatcaccggtaaaaacggcactttccacactgaacaggc 255 Query: 266 catcgagtacggcaccaacatggtaggtggagttactcccaagaaaggtggaac 319 ||| || || || || || ||||| |||||||| || |||||||| |||||||| Sbjct: 256 cattgaatatggtactaaaatggttggtggagtgacccccaagaagggtggaac 309 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 tatgttccaccaccatttgctgctgc 421 |||||||| ||||||||||||||||| Sbjct: 386 tatgttcctccaccatttgctgctgc 411
>emb|BX830319.1|CNS09ZZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| ||| |||| ||||||||||| || || ||||| || ||| Sbjct: 226 atctgccaaggtattaccggaaaggacgggaccttccacactgaacaagccattgaatac 285 Query: 276 ggcaccaacatggtaggtggagttactcccaagaaaggtggaactgagcacctaggcctt 335 |||||||| ||||||| ||||| || || ||||| |||||||| || || | || || Sbjct: 286 ggcaccaaaatggtagcaggagtgacaccaaagaagggtggaacagaacatttggggcta 345 Query: 336 ccagttttcaactcagtagcagaagctaaggccgagacaaaggccaatgc 385 || ||||||||| | || || ||||||||||| ||||| || |||||||| Sbjct: 346 cctgttttcaacactgttgctgaagctaaggctgagactaaagccaatgc 395
>gb|AY650029.1| Lycopersicon esculentum cultivar TA496 succinyl-CoA ligase alpha 2 subunit mRNA, complete cds Length = 1322 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 206 cacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 ||||||||| || || || ||||||||||| || |||||||| |||||||| || ||||| Sbjct: 204 cacccgcgtcatatgtcaaggcatcaccggtaaaaacggcactttccacactgaacaggc 263 Query: 266 catcgagtacggcaccaacatggtaggtggagttactcccaagaaaggtggaac 319 ||| || || || || || ||||| |||||||| || |||||||| |||||||| Sbjct: 264 cattgaatatggtactaaaatggttggtggagtgacccccaagaagggtggaac 317 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 tatgttccaccaccatttgctgctgc 421 |||||||| ||||||||||||||||| Sbjct: 394 tatgttcctccaccatttgctgctgc 419
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||||||||||||||| | | ||||||||||||||||||||||| |||| ||| Sbjct: 2728713 atctgccagggcatcaccggcagccagggcaccttccacaccgagcaggcgatcgcctac 2728654 Query: 276 ggcaccaacatggt 289 ||||| || ||||| Sbjct: 2728653 ggcacgaagatggt 2728640
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 213 gtgatctgccagggcatcaccgggaagaacggcaccttcca 253 ||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 210204 gtgatctgccagggcttcaccggcaagaacggcaccttcca 210164
>gb|AE005707.1| Caulobacter crescentus CB15 section 33 of 359 of the complete genome Length = 12099 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||||||||||||||| | ||||| |||||||||||||||||||||| |||| Sbjct: 1429 atctgccagggcatcaccggcgctcaaggcacgttccacaccgagcaggccatcgcgtac 1488 Query: 276 ggcac 280 ||||| Sbjct: 1489 ggcac 1493
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 206 cacccgcgtgatctgccagggcatcaccgggaagaacggcaccttcca 253 ||||||||| |||||||||||| ||||||| |||||||| |||||||| Sbjct: 213427 cacccgcgttatctgccagggcttcaccggcaagaacggtaccttcca 213380
>ref|XM_504333.1| Yarrowia lipolytica CLIB122, YALI0E24013g predicted mRNA Length = 1017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 221 ccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtacggcac 280 ||||||| ||||||| ||| | || ||||||||| || ||||||||||||| |||||||| Sbjct: 153 ccagggcttcaccggaaagcagggaaccttccacgcccagcaggccatcgactacggcac 212 Query: 281 caa 283 ||| Sbjct: 213 caa 215
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 249 ttccacaccgagcaggccatcgagtacggcaccaacatggtaggtggagttactcccaag 308 ||||||||| |||| |||||||||||||||||||| ||||| || || || ||||| Sbjct: 1928949 ttccacacccagcaagccatcgagtacggcaccaagatggttggcggcgtaactcctggc 1929008 Query: 309 aaaggtggaactgagcacctaggccttccagttttcaac 347 ||||| || || |||||||| ||||| ||||| |||||| Sbjct: 1929009 aaaggcggcaccgagcacctgggcctgccagtgttcaac 1929047
>dbj|AB007648.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKD15 Length = 76329 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||| || || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct: 41754 atctgccaaggtattaccggaaagaacgggaccttccacactgaacaagccattgaatac 41813 Query: 276 ggcaccaacatggta 290 |||||||| |||||| Sbjct: 41814 ggcaccaaaatggta 41828
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 221 ccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtacggcac 280 ||||||| ||||||| ||| | || ||||||||| || ||||||||||||| |||||||| Sbjct: 2851855 ccagggcttcaccggaaagcagggaaccttccacgcccagcaggccatcgactacggcac 2851796 Query: 281 caa 283 ||| Sbjct: 2851795 caa 2851793
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttcca 253 |||||||||||| ||||||| ||||||||||||||||| Sbjct: 610651 atctgccagggcttcaccggcaagaacggcaccttcca 610688
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 216 atctgccagggcatcaccgggaagaacggcaccttcca 253 |||||||||||| ||||||| ||||||||||||||||| Sbjct: 316436 atctgccagggcttcaccggcaagaacggcaccttcca 316399 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 ggccagcacatcgccatggccgcc 95 |||||||| ||||||||||||||| Sbjct: 496419 ggccagcagatcgccatggccgcc 496396
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 216 atctgccagggcatcaccgggaagaacggcaccttcca 253 |||||||||||| ||||||| ||||||||||||||||| Sbjct: 492246 atctgccagggcttcaccggcaagaacggcaccttcca 492209
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 243 ggcaccttccacaccgagcaggccatcgagtacggcaccaacatggtaggtgg 295 |||||||||||| ||||||||||||||| || |||||||| ||||| ||||| Sbjct: 4368083 ggcaccttccactccgagcaggccatcgcctatggcaccaagatggtcggtgg 4368135
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 229 tcaccgggaagaacggcaccttccacaccgagcaggc 265 ||||||| |||||||||||||||||| |||||||||| Sbjct: 1124007 tcaccggcaagaacggcaccttccacgccgagcaggc 1124043
>emb|BX071153.1|CNS09R2D Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8CC09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 181 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 240 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 241 ggcaccaagctggtcggtggagt 263
>emb|BX068348.1|CNS09OWG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52CA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 311 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 47 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 106 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 107 ggcaccaagctggtcggtggagt 129
>emb|BX064033.1|CNS09LKL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46AF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 622 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 200 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 259 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 260 ggcaccaagctggtcggtggagt 282
>emb|BX061660.1|CNS09JQO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42CD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1022 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 183 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 242 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 243 ggcaccaagctggtcggtggagt 265
>emb|BX055488.1|CNS09EZ8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 238 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 153 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 212 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 213 ggcaccaagctggtcggtggagt 235
>emb|BX033795.1|CNS08Y8N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5BG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 200 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 259 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 260 ggcaccaagctggtcggtggagt 282
>emb|BX033788.1|CNS08Y8G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 861 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 171 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 230 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 231 ggcaccaagctggtcggtggagt 253
>emb|BX022457.1|CNS08PHP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA34BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 268 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 170 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 229 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 230 ggcaccaagctggtcggtggagt 252
>emb|BX011216.1|CNS08GTG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1027 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 179 atctgccagggattcaccggcaagcagggaaccttccactcgcagcaagccatcgagtat 238 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 239 ggcaccaagctggtcggtggagt 261
>ref|XM_321835.2| Anopheles gambiae str. PEST ENSANGP00000020396 (ENSANGG00000017907), mRNA Length = 1940 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | |||| ||||||||||| Sbjct: 247 atctgccagggattcaccggtaagcagggtaccttccactcgcagcaagccatcgagtat 306 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 307 ggcaccaagctggttggtggagt 329
>gb|DQ440261.1| Aedes aegypti clone AET-319 succinyl-CoA synthetase alpha subunit mRNA, complete cds Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| |||| || ||| | |||||||||||| || |||||||| |||||||| Sbjct: 118 atctgccagggattcacgggaaagcagggcaccttccactcccagcaggccctcgagtac 177 Query: 276 gg 277 || Sbjct: 178 gg 179
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttcca 253 |||||||||||| ||||||| ||||||||||| ||||| Sbjct: 472327 atctgccagggcttcaccggcaagaacggcacgttcca 472364
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||||||| | ||||| ||||||||||| || ||| ||||| ||||||| ||| Sbjct: 601806 atctgccagggctttaccggcaagaacggcacgtttcactccgaggccgccatcgcctac 601747 Query: 276 ggcaccaacatggt 289 |||||||| ||||| Sbjct: 601746 ggcaccaagatggt 601733 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgccggcggtgttcgtcgac 200 |||||||||||||||||||| Sbjct: 2572833 cgccggcggtgttcgtcgac 2572814
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 222 cagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 |||||| | ||||| |||| ||| |||||||||||||||||||| Sbjct: 270622 cagggcctgaccggcaagaccggtaccttccacaccgagcaggc 270579
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 221 ccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtacg 276 ||||||||||||||| |||| |||| |||||||||||| || ||||||||||| Sbjct: 752047 ccagggcatcaccggcaagaccggccagttccacaccgagaagtgcatcgagtacg 751992
>emb|AJ719851.1| Gallus gallus mRNA for hypothetical protein, clone 7e3 Length = 3429 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 392 tatatatgttccaccaccatttgctgctgctgcaat 427 ||||||||| || || |||||||||||||||||||| Sbjct: 355 tatatatgtacctcctccatttgctgctgctgcaat 390
>ref|NM_001012892.1| Gallus gallus succinate-CoA ligase, GDP-forming, alpha subunit (SUCLG1), mRNA Length = 3429 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 392 tatatatgttccaccaccatttgctgctgctgcaat 427 ||||||||| || || |||||||||||||||||||| Sbjct: 355 tatatatgtacctcctccatttgctgctgctgcaat 390
>ref|XM_713355.1| Candida albicans SC5314 succinate-CoA ligase (CaO19_10866), mRNA Length = 972 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 398 tgttccaccaccatttgctgctgctgc 424 ||||||||||||| ||||||||||||| Sbjct: 282 tgttccaccaccacttgctgctgctgc 308
>ref|XM_713088.1| Candida albicans SC5314 succinate-CoA ligase (CaO19_3358), mRNA Length = 972 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 398 tgttccaccaccatttgctgctgctgc 424 ||||||||||||| ||||||||||||| Sbjct: 282 tgttccaccaccacttgctgctgctgc 308
>gb|AE009211.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 237 of 256 of the complete sequence Length = 10956 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Minus Query: 231 accgggaagaacggcaccttccacaccgagcaggc 265 ||||| |||| |||||||||||||||||| ||||| Sbjct: 946 accggcaagaccggcaccttccacaccgaacaggc 912
>emb|BX059845.1|CNS09IC9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4DH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 569 Score = 46.1 bits (23), Expect = 0.093 Identities = 68/83 (81%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 ||||||||||| ||||||| ||| | || ||||||||| | ||| ||||||||||| Sbjct: 24 atctgccagggattcaccggcaagcagggaaccttccactcgcggcaagccatcgagtat 83 Query: 276 ggcaccaacatggtaggtggagt 298 |||||||| |||| |||||||| Sbjct: 84 ggcaccaagctggtcggtggagt 106
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Minus Query: 231 accgggaagaacggcaccttccacaccgagcaggc 265 ||||| |||| |||||||||||||||||| ||||| Sbjct: 4123424 accggcaagaccggcaccttccacaccgaacaggc 4123390
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Minus Query: 231 accgggaagaacggcaccttccacaccgagcaggc 265 ||||| |||| |||||||||||||||||| ||||| Sbjct: 2623300 accggcaagaccggcaccttccacaccgaacaggc 2623266
>dbj|AK107600.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-B05, full insert sequence Length = 1386 Score = 46.1 bits (23), Expect = 0.093 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 ttccacaccgagcaggccatcgagtacggcaccaa 283 |||||| || ||||||||||||| ||||||||||| Sbjct: 282 ttccacgcccagcaggccatcgaatacggcaccaa 316
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 288 gtaggtggagttactcccaagaaaggtggaactgagca 325 |||||||| ||||| || || ||||||||||||||||| Sbjct: 1116715 gtaggtggtgttacaccaaataaaggtggaactgagca 1116752
>ref|XM_507316.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.22 patrial mRNA Length = 2841 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 742 caccaccatttgctgctgctgc 721
>ref|XM_470329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4200 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 2359 caccaccatttgctgctgctgc 2338
>ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgcc 184 |||||||||||||||||||||| Sbjct: 622 cggccgccgccgcgccctcgcc 601
>ref|XM_479608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2204 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ctccgccgcctcccgcttcctc 146 |||||||||||||||||||||| Sbjct: 437 ctccgccgcctcccgcttcctc 458
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgcc 184 |||||||||||||||||||||| Sbjct: 35558940 cggccgccgccgcgccctcgcc 35558919 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 34792311 caccaccatttgctgctgctgc 34792332 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 11286547 caccaccatttgctgctgctgc 11286568 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 4248710 tcgccatggccgcctcctcc 4248691
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 70339 caccaccatttgctgctgctgc 70318
>ref|XM_391661.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11485.1) partial mRNA Length = 963 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Plus Query: 264 gccatcgagtacggcaccaacatggtaggtggagttactcccaagaaagg 313 ||||||| |||||| || ||||| ||||| |||||| | ||||||||||| Sbjct: 202 gccatcgcgtacggaacaaacattgtaggcggagtttcgcccaagaaagg 251
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 65500 caccaccatttgctgctgctgc 65521
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 156 ggctacgcggccgccgccgcgccctcgccg 185 |||| |||||||||||||||||| |||||| Sbjct: 276717 ggctccgcggccgccgccgcgccgtcgccg 276746
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 catcgccatggccgcctcctcc 101 |||||||||||||||||||||| Sbjct: 105442 catcgccatggccgcctcctcc 105463
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.37 Identities = 55/66 (83%) Strand = Plus / Plus Query: 216 atctgccagggcatcaccgggaagaacggcaccttccacaccgagcaggccatcgagtac 275 |||||||||||| |||| || ||| | |||| |||||| |||||||||| |||| ||| Sbjct: 847956 atctgccagggcttcacgggcaagcagggcagcttccattccgagcaggcgatcgcctac 848015 Query: 276 ggcacc 281 |||||| Sbjct: 848016 ggcacc 848021
>ref|XM_395781.2| PREDICTED: Apis mellifera similar to ENSANGP00000010984 (LOC412320), mRNA Length = 1380 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 tatatatgttccaccaccatttgctg 417 |||| ||||||||||||||||||||| Sbjct: 948 tatacatgttccaccaccatttgctg 973
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 catcgccatggccgcctcctcc 101 |||||||||||||||||||||| Sbjct: 31008069 catcgccatggccgcctcctcc 31008090
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 27250674 caccaccatttgctgctgctgc 27250653
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgcc 184 |||||||||||||||||||||| Sbjct: 35649012 cggccgccgccgcgccctcgcc 35648991 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 34882383 caccaccatttgctgctgctgc 34882404 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 11283310 caccaccatttgctgctgctgc 11283331 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 4248825 tcgccatggccgcctcctcc 4248806
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 13927348 caccaccatttgctgctgctgc 13927327
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ccgccgccgcgccctcgccggc 187 |||||||||||||||||||||| Sbjct: 3602000 ccgccgccgcgccctcgccggc 3602021 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ggccgccgccgcgccctcgccggc 187 ||||||||||||| |||||||||| Sbjct: 3990564 ggccgccgccgcggcctcgccggc 3990541 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cgccgcgccctcgccggcgg 189 |||||||||||||||||||| Sbjct: 638154 cgccgcgccctcgccggcgg 638135
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgcc 184 |||||||||||||||||||||| Sbjct: 91903 cggccgccgccgcgccctcgcc 91882
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ctccgccgcctcccgcttcctc 146 |||||||||||||||||||||| Sbjct: 74493 ctccgccgcctcccgcttcctc 74514
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ctccgccgcctcccgcttcctc 146 |||||||||||||||||||||| Sbjct: 125878 ctccgccgcctcccgcttcctc 125899
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 cgtcgacaagagcacccgcgtg 215 |||||||||||||||||||||| Sbjct: 4902545 cgtcgacaagagcacccgcgtg 4902566
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 99246 caccaccatttgctgctgctgc 99225
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 73877 caccaccatttgctgctgctgc 73856
>dbj|AK119307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F11, full insert sequence Length = 2841 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 742 caccaccatttgctgctgctgc 721
>dbj|AK072401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077K12, full insert sequence Length = 3251 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 caccaccatttgctgctgctgc 424 |||||||||||||||||||||| Sbjct: 2507 caccaccatttgctgctgctgc 2486
>dbj|AK071235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P13, full insert sequence Length = 2221 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ctccgccgcctcccgcttcctc 146 |||||||||||||||||||||| Sbjct: 454 ctccgccgcctcccgcttcctc 475
>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full insert sequence Length = 1360 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgcc 184 |||||||||||||||||||||| Sbjct: 661 cggccgccgccgcgccctcgcc 640
>ref|NM_186193.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2284 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||| |||||||||||| Sbjct: 127 gccgccgccgcggcctcgccggcgg 103
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 51685 gccgccgccgcgccctcgccg 51665
>ref|XM_414404.1| PREDICTED: Gallus gallus similar to Pyruvate dehydrogenase E1 component beta subunit, mitochondrial precursor (PDHE1-B) (LOC416066), mRNA Length = 1922 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 73 ggccgcctcctcccgccgcgc 93
>ref|NM_022463.3| Homo sapiens nucleoredoxin (NXN), mRNA Length = 3004 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gccgcctcctcccgccgcgcg 110 ||||||||||||||||||||| Sbjct: 23 gccgcctcctcccgccgcgcg 43
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 162 gcggccgccgccgcgccctcgccggcggtgttcgtcg 198 ||||| || |||||||||| ||||||||||||||||| Sbjct: 8933 gcggcggcggccgcgccct-gccggcggtgttcgtcg 8968
>gb|AY466351.1| Litopenaeus vannamei microsatellite TUMXLV10.16 sequence Length = 449 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gaggagagaaaagggagagga 55 ||||||||||||||||||||| Sbjct: 263 gaggagagaaaagggagagga 243 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 221 ggagagaaaagggagaggag 202
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 162 gcggccgccgccgcgccctcgccggcggtgttcgtcg 198 ||||| || |||||||||| ||||||||||||||||| Sbjct: 129055 gcggcggcggccgcgccct-gccggcggtgttcgtcg 129090
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence Length = 207661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgcctcctcccgccgcgcg 110 ||||||||||||||||||||| Sbjct: 29244 gccgcctcctcccgccgcgcg 29224
>ref|NM_001031196.1| Gallus gallus LOC423249 (LOC423249), mRNA Length = 1883 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 201 ggccgcctcctcccgccgcgc 181
>emb|AJ719363.1| Gallus gallus mRNA for hypothetical protein, clone 1k4 Length = 1883 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 201 ggccgcctcctcccgccgcgc 181
>emb|AL645695.18| Mouse DNA sequence from clone RP23-453H19 on chromosome 11 Contains the Pctp gene for phosphatidylcholine transfer protein, complete sequence Length = 142743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 accaccatttgctgctgctgc 424 ||||||||||||||||||||| Sbjct: 51055 accaccatttgctgctgctgc 51075
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 gcggccgccgccgcgccctcgccgg 186 |||||||||||||||||| |||||| Sbjct: 40171 gcggccgccgccgcgcccgcgccgg 40147
>gb|AE005800.1| Caulobacter crescentus CB15 section 126 of 359 of the complete genome Length = 7934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 cgcggccgccgccgcgccctc 181 ||||||||||||||||||||| Sbjct: 7067 cgcggccgccgccgcgccctc 7087
>gb|DQ067482.1| Tarsius syrichta msh homeobox 1-like protein (MSX1) gene, exon 1 and partial cds Length = 477 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 cggccgccgccgcgccctcgccggc 187 ||||||||| ||||||||||||||| Sbjct: 248 cggccgccggcgcgccctcgccggc 224
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 249 ttccacaccgagcaggccatcgagtacggcaccaacatggt 289 |||||| ||||||||||||||| || |||||||| ||||| Sbjct: 1430225 ttccactccgagcaggccatcgcctatggcaccaagatggt 1430265
>emb|BX932671.2| Gallus gallus finished cDNA, clone ChEST496l3 Length = 678 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 30 ggccgcctcctcccgccgcgc 50
>emb|BX931100.2| Gallus gallus finished cDNA, clone ChEST200d22 Length = 1098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 74 ggccgcctcctcccgccgcgc 94
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ccgccgcctcccgcttcctcc 147 ||||||||||||||||||||| Sbjct: 25287208 ccgccgcctcccgcttcctcc 25287228 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 13155292 gccgccgccgcgccctcgccg 13155312 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||||| |||||||||| Sbjct: 3438777 gccgccgccgcgccgtcgccggcgg 3438753
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 162 gcggccgccgccgcgccctcgccggcggtgttcgtcg 198 ||||| || |||||||||| ||||||||||||||||| Sbjct: 25402042 gcggcggcggccgcgccct-gccggcggtgttcgtcg 25402077 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 2771878 gccgccgccgcgccctcgccg 2771858 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tacgcggccgccgccgcgcc 178 |||||||||||||||||||| Sbjct: 2628945 tacgcggccgccgccgcgcc 2628926
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 cgcggccgccgccgcgccctc 181 ||||||||||||||||||||| Sbjct: 21953028 cgcggccgccgccgcgccctc 21953008
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 gcggccgccgccgcgccctcgccgg 186 |||||||||||||||||| |||||| Sbjct: 23214765 gcggccgccgccgcgcccgcgccgg 23214741
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gagaggagagaaaagggagag 53 ||||||||||||||||||||| Sbjct: 38355496 gagaggagagaaaagggagag 38355476 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 aactcagtagcagaagctaa 364 |||||||||||||||||||| Sbjct: 1153043 aactcagtagcagaagctaa 1153062
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gagaggagagaaaagggagag 53 ||||||||||||||||||||| Sbjct: 116096 gagaggagagaaaagggagag 116076
>emb|BX933955.1| Gallus gallus finished cDNA, clone ChEST131b5 Length = 1898 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggccgcctcctcccgccgcgc 109 ||||||||||||||||||||| Sbjct: 46 ggccgcctcctcccgccgcgc 66
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gagaggagagaaaagggagag 53 ||||||||||||||||||||| Sbjct: 116321 gagaggagagaaaagggagag 116301
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||| |||||||||||| Sbjct: 92400 gccgccgccgcggcctcgccggcgg 92376
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 204 agcacccgcgtgatctgccagggcatcaccgggaagaacggcaccttccacaccgag 260 ||||||||||| ||| |||||| ||||||| |||| ||||| ||||||| ||||| Sbjct: 1111940 agcacccgcgtcatcgtccagggtttcaccggcaagatcggcagcttccacgccgag 1111996
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 cgcggccgccgccgcgccctc 181 ||||||||||||||||||||| Sbjct: 175513 cgcggccgccgccgcgccctc 175493
>dbj|AK122147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138G15, full insert sequence Length = 3697 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ccgccgcctcccgcttcctcc 147 ||||||||||||||||||||| Sbjct: 335 ccgccgcctcccgcttcctcc 315
>dbj|AK120059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E13, full insert sequence Length = 2345 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 61 gccgccgccgcgccctcgccg 41
>dbj|AK108017.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-H11, full insert sequence Length = 587 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 162 gcggccgccgccgcgccctcgccggcggtgttcgtcg 198 ||||| || |||||||||| ||||||||||||||||| Sbjct: 288 gcggcggcggccgcgccct-gccggcggtgttcgtcg 323
>dbj|AK107125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B10, full insert sequence Length = 1521 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||||| |||||||||| Sbjct: 358 gccgccgccgcgccgtcgccggcgg 382
>dbj|AK100372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084G21, full insert sequence Length = 2284 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||| |||||||||||| Sbjct: 127 gccgccgccgcggcctcgccggcgg 103
>dbj|AK071692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B13, full insert sequence Length = 903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 69 gccgccgccgcgccctcgccg 89
>dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2655K5, complete sequence Length = 191589 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 cctcccgccgcgcgtcccagatgct 121 |||||||||||||||||||| |||| Sbjct: 142390 cctcccgccgcgcgtcccagttgct 142414
>dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-856M9, complete sequence Length = 187516 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 cctcccgccgcgcgtcccagatgct 121 |||||||||||||||||||| |||| Sbjct: 80155 cctcccgccgcgcgtcccagttgct 80179
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 162 gcggccgccgccgcgccctcgccggcggtgttcgtcg 198 ||||| || |||||||||| ||||||||||||||||| Sbjct: 25720712 gcggcggcggccgcgccct-gccggcggtgttcgtcg 25720747 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 2780909 gccgccgccgcgccctcgccg 2780889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tacgcggccgccgccgcgcc 178 |||||||||||||||||||| Sbjct: 2637976 tacgcggccgccgccgcgcc 2637957
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ccgccgcctcccgcttcctcc 147 ||||||||||||||||||||| Sbjct: 25215384 ccgccgcctcccgcttcctcc 25215404 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 13109567 gccgccgccgcgccctcgccg 13109587 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||||| |||||||||| Sbjct: 3438722 gccgccgccgcgccgtcgccggcgg 3438698
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ccgccgcctcccgcttcctcc 147 ||||||||||||||||||||| Sbjct: 49982 ccgccgcctcccgcttcctcc 49962
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 175450 gccgccgccgcgccctcgccg 175430
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccg 185 ||||||||||||||||||||| Sbjct: 144495 gccgccgccgcgccctcgccg 144515
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||||| |||||||||| Sbjct: 93138 gccgccgccgcgccgtcgccggcgg 93162
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgccggcgg 189 |||||||||||||| |||||||||| Sbjct: 117830 gccgccgccgcgccgtcgccggcgg 117806
>ref|NM_022385.2| Rattus norvegicus ADP-ribosylation factor-like 1 (Arl1), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 170 ccgccgccgcgccctcgccg 151
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 166 tcgccatggccgcctcctcc 147
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ggctacgcggccgccgccgc 175 |||||||||||||||||||| Sbjct: 291362 ggctacgcggccgccgccgc 291343
>gb|BC061553.1| Rattus norvegicus ADP-ribosylation factor-like 1, mRNA (cDNA clone MGC:72836 IMAGE:6889396), complete cds Length = 1758 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 170 ccgccgccgcgccctcgccg 151
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 222 cagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 |||||| | ||||| |||| |||||| ||||||||||| ||||| Sbjct: 1859140 cagggcctgaccggcaagaccggcactttccacaccgaacaggc 1859097
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tacgcggccgccgccgcgcc 178 |||||||||||||||||||| Sbjct: 97853 tacgcggccgccgccgcgcc 97872
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cggcaccttccacaccgagcaggc 265 |||||||||||||||||| ||||| Sbjct: 2343164 cggcaccttccacaccgaacaggc 2343141
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgctgggctccgccgcctcc 137 |||||||||||||||||||| Sbjct: 855276 tgctgggctccgccgcctcc 855257
>gb|AC133496.3| Mus musculus BAC clone RP24-386G2 from chromosome 13, complete sequence Length = 173924 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 agaggagagaaaagggagaggagc 57 ||||| |||||||||||||||||| Sbjct: 70488 agaggggagaaaagggagaggagc 70511
>ref|NM_025859.1| Mus musculus ADP-ribosylation factor-like 1 (Arl1), mRNA Length = 1742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 161 ccgccgccgcgccctcgccg 142
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgcctcctcccgccgcgcg 110 |||||||||||||||||||| Sbjct: 83110 ccgcctcctcccgccgcgcg 83091
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 246 accttccacaccgagcaggccatcgagtacggcaccaacatggt 289 ||||||||| ||||||| ||||| | ||||||||||| ||||| Sbjct: 2336816 accttccactccgagcaagccattgcctacggcaccaagatggt 2336859
>gb|DQ226553.1| Boechera divaricarpa isolate SLW-1-E02 mRNA sequence Length = 507 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aatcgaatcgagaggagaga 43 |||||||||||||||||||| Sbjct: 423 aatcgaatcgagaggagaga 404
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 246 accttccacaccgagcaggccatcgagtacggcaccaacatggt 289 ||||||||| ||||||| ||||| | ||||||||||| ||||| Sbjct: 2332588 accttccactccgagcaagccattgcctacggcaccaaaatggt 2332631
>ref|XM_001003928.1| PREDICTED: Mus musculus hypothetical protein LOC668841 (LOC668841), mRNA Length = 1008 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgccgccgcgccctcgcc 184 |||||||||||||||||||| Sbjct: 671 gccgccgccgcgccctcgcc 690
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgcgcgtcccagatgctggg 124 |||||||||||||||||||| Sbjct: 1144691 cgcgcgtcccagatgctggg 1144710
>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 63717 ggagagaaaagggagaggag 63736
>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence Length = 178254 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgccgccgcgccctcgcc 184 |||||||||||||||||||| Sbjct: 56240 gccgccgccgcgccctcgcc 56221
>emb|AL354813.31| Human DNA sequence from clone CTD-2653D5 on chromosome 20 Contains part of the gene for a novel protein similar to glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2, KIAA1247), complete sequence Length = 93156 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gagaggagagaaaagggagaggag 56 ||||||||||||| |||||||||| Sbjct: 58057 gagaggagagaaacgggagaggag 58080
>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the 5' end of a variant of a novel gene (FLJ90578) and a CpG island, complete sequence Length = 174535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aggagagaaaagggagagga 55 |||||||||||||||||||| Sbjct: 46391 aggagagaaaagggagagga 46410
>emb|X76920.1|RNARF7 R.norvegicus ARL1 mRNA for ARF-like protein 1 Length = 893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 87 ccgccgccgcgccctcgccg 68
>gb|AC007716.8| Homo sapiens chromosome , clone RP11-94O8, complete sequence Length = 166759 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gagaggagagaaaagggagaggag 56 |||||||||||| ||||||||||| Sbjct: 161354 gagaggagagaacagggagaggag 161331
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 39573 tcgccatggccgcctcctcc 39554
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tatatatgttccaccaccat 411 |||||||||||||||||||| Sbjct: 348682 tatatatgttccaccaccat 348701
>ref|XM_694395.1| PREDICTED: Danio rerio similar to KIAA1636 protein (LOC570870), partial mRNA Length = 778 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gggctacgcggccgccgccg 174 |||||||||||||||||||| Sbjct: 174 gggctacgcggccgccgccg 193
>dbj|AK167748.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730005I21 product:ADP-ribosylation factor-like 1, full insert sequence Length = 1726 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 138 ccgccgccgcgccctcgccg 119
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cggcaccttccacaccgagcaggc 265 |||||||||||||||||| ||||| Sbjct: 1223768 cggcaccttccacaccgaacaggc 1223745
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 396 tatgttccaccaccatttgctgctgctgcaat 427 ||||| ||| ||||||||||||||| |||||| Sbjct: 1581255 tatgtaccagcaccatttgctgctgatgcaat 1581224
>dbj|AK010732.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410080N19 product:ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1 homolog [Rattus norvegicus], full insert sequence Length = 844 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 142 ccgccgccgcgccctcgccg 123
>gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome 13, complete sequence Length = 237313 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 agaggagagaaaagggagaggagc 57 ||||| |||||||||||||||||| Sbjct: 211280 agaggggagaaaagggagaggagc 211303
>dbj|AK088330.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430013D08 product:ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1 homolog [Rattus norvegicus], full insert sequence Length = 1746 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 190 ccgccgccgcgccctcgccg 171
>dbj|AK009226.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310008D22 product:ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1 homolog [Rattus norvegicus], full insert sequence Length = 1742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 161 ccgccgccgcgccctcgccg 142
>gb|BC096684.1| Mus musculus ADP-ribosylation factor-like 1, mRNA (cDNA clone MGC:106969 IMAGE:1248346), complete cds Length = 1652 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 98 ccgccgccgcgccctcgccg 79
>dbj|AK018138.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330407J01 product:ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1 homolog [Rattus norvegicus], full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 143 ccgccgccgcgccctcgccg 124
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 15185874 tcgccatggccgcctcctcc 15185855
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 94487 tcgccatggccgcctcctcc 94468
>gb|AE009456.1| Brucella melitensis 16M chromosome I, section 13 of 195 of the complete sequence Length = 11111 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 222 cagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 |||||| | ||||| |||| |||||| ||||||||||| ||||| Sbjct: 10081 cagggcctgaccggcaagaccggcactttccacaccgaacaggc 10124
>gb|AC155820.2| Mus musculus BAC clone RP23-360J10 from chromosome 10, complete sequence Length = 221801 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 36760 ccgccgccgcgccctcgccg 36741
>gb|AC140379.3| Mus musculus BAC clone RP24-215M3 from chromosome 10, complete sequence Length = 141034 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gagaggagagaaaagggagaggag 56 |||||||||||| ||||||||||| Sbjct: 3779 gagaggagagaagagggagaggag 3756
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 222 cagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 |||||| | ||||| |||| |||||| ||||||||||| ||||| Sbjct: 1876120 cagggcctgaccggcaagaccggcactttccacaccgaacaggc 1876077
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 aactcagtagcagaagctaa 364 |||||||||||||||||||| Sbjct: 122357 aactcagtagcagaagctaa 122376
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 aactcagtagcagaagctaa 364 |||||||||||||||||||| Sbjct: 7346 aactcagtagcagaagctaa 7365
>gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219072 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 18541 ggagagaaaagggagaggag 18522
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 61 tcgccatggccgcctcctcc 42
>dbj|AK100124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007P07, full insert sequence Length = 1794 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tacgcggccgccgccgcgcc 178 |||||||||||||||||||| Sbjct: 167 tacgcggccgccgccgcgcc 186
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 52 tcgccatggccgcctcctcc 33
>gb|AC154459.2| Mus musculus BAC clone RP24-162O6 from 17, complete sequence Length = 163506 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 2819 ggagagaaaagggagaggag 2800
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 61 tcgccatggccgcctcctcc 42
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 56 tcgccatggccgcctcctcc 37
>gb|AY104341.1| Zea mays PCO142367 mRNA sequence Length = 1295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggccgccgccgcgccctcgc 183 |||||||||||||||||||| Sbjct: 438 ggccgccgccgcgccctcgc 419
>dbj|AB076253.1| Fusarium oxysporum Fopho5 gene, FoTri101 pseudogene, Foscs pseudogene, Foura7 gene, partial and complete cds Length = 8856 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cacctaggccttccagttttcaac 347 ||||||||||||||||| |||||| Sbjct: 6394 cacctaggccttccagtcttcaac 6371
>gb|BC082922.1| Xenopus laevis hypothetical LOC494796, mRNA (cDNA clone MGC:85496 IMAGE:6939997), complete cds Length = 1273 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 396 tatgttccaccaccatttgctgctgctgcaat 427 ||||| ||||| || ||||||||||||||||| Sbjct: 322 tatgtgccacctccctttgctgctgctgcaat 353
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ctacgcggccgccgccgcgc 177 |||||||||||||||||||| Sbjct: 170911 ctacgcggccgccgccgcgc 170930
>dbj|AK113070.1| Ciona intestinalis cDNA, clone:ciad004b03, full insert sequence Length = 4849 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tccaccaccatttgctgctg 420 |||||||||||||||||||| Sbjct: 1871 tccaccaccatttgctgctg 1890
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acgcggccgccgccgcgccc 179 |||||||||||||||||||| Sbjct: 4708127 acgcggccgccgccgcgccc 4708146
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 15194115 tcgccatggccgcctcctcc 15194096
>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence Length = 262262 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccgccgccgcgccctcgccg 185 |||||||||||||||||||| Sbjct: 242906 ccgccgccgcgccctcgccg 242887
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgcctcctcccgccgcgcg 110 |||||||||||||||||||| Sbjct: 83027 ccgcctcctcccgccgcgcg 83008
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 222 cagggcatcaccgggaagaacggcaccttccacaccgagcaggc 265 |||||| | ||||| |||| |||||| ||||||||||| ||||| Sbjct: 1873248 cagggcctgaccggcaagaccggcactttccacaccgaacaggc 1873205
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgccatggccgcctcctcc 101 |||||||||||||||||||| Sbjct: 77325 tcgccatggccgcctcctcc 77306
>gb|AC130201.3| Mus musculus BAC clone RP24-570A9 from chromosome 1, complete sequence Length = 147016 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gagaggagagaaaagggagaggag 56 |||||||||||| ||||||||||| Sbjct: 116674 gagaggagagaagagggagaggag 116697
>gb|AC166350.4| Mus musculus BAC clone RP24-220P10 from chromosome 17, complete sequence Length = 156954 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 128813 ggagagaaaagggagaggag 128794
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagagaaaagggagaggag 56 |||||||||||||||||||| Sbjct: 13994 ggagagaaaagggagaggag 13975 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,755,829 Number of Sequences: 3902068 Number of extensions: 4755829 Number of successful extensions: 118449 Number of sequences better than 10.0: 195 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 111208 Number of HSP's gapped (non-prelim): 7238 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)