| Clone Name | bast63g07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190160.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 154 tacgcggcgtcgctccccgtcctcctcgcctgcaacgccacccgcttccagcccgcctgc 213 ||||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 118 tacgcggcgccgctcgccgtcctcctcgcttgcaacgccacgcggttccagcccgcctgc 177 Query: 214 gtcgccacgct 224 ||| ||||||| Sbjct: 178 gtctccacgct 188 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 314 tctccaccgcgcgctccgtcctcgcctcctccaagaacgtcaacctctccgccgccgcca 373 ||||||| ||||| |||||||||||| ||||| |||||||||||| || |||||||| Sbjct: 272 tctccacggcgcggtccgtcctcgccgcctcctccaacgtcaacctcaccaacgccgcca 331 Query: 374 ccaactgcct 383 |||||||||| Sbjct: 332 ccaactgcct 341
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 154 tacgcggcgtcgctccccgtcctcctcgcctgcaacgccacccgcttccagcccgcctgc 213 ||||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 38204780 tacgcggcgccgctcgccgtcctcctcgcttgcaacgccacgcggttccagcccgcctgc 38204721 Query: 214 gtcgccacgct 224 ||| ||||||| Sbjct: 38204720 gtctccacgct 38204710 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 314 tctccaccgcgcgctccgtcctcgcctcctccaagaacgtcaacctctccgccgccgcca 373 ||||||| ||||| |||||||||||| ||||| |||||||||||| || |||||||| Sbjct: 38204626 tctccacggcgcggtccgtcctcgccgcctcctccaacgtcaacctcaccaacgccgcca 38204567 Query: 374 ccaactgcct 383 |||||||||| Sbjct: 38204566 ccaactgcct 38204557 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 279078 cctctccgccgccgccacca 279059
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 154 tacgcggcgtcgctccccgtcctcctcgcctgcaacgccacccgcttccagcccgcctgc 213 ||||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 124014 tacgcggcgccgctcgccgtcctcctcgcttgcaacgccacgcggttccagcccgcctgc 123955 Query: 214 gtcgccacgct 224 ||| ||||||| Sbjct: 123954 gtctccacgct 123944 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 314 tctccaccgcgcgctccgtcctcgcctcctccaagaacgtcaacctctccgccgccgcca 373 ||||||| ||||| |||||||||||| ||||| |||||||||||| || |||||||| Sbjct: 123860 tctccacggcgcggtccgtcctcgccgcctcctccaacgtcaacctcaccaacgccgcca 123801 Query: 374 ccaactgcct 383 |||||||||| Sbjct: 123800 ccaactgcct 123791
>dbj|AK105682.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B06, full insert sequence Length = 1731 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 154 tacgcggcgtcgctccccgtcctcctcgcctgcaacgccacccgcttccagcccgcctgc 213 ||||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 163 tacgcggcgccgctcgccgtcctcctcgcttgcaacgccacgcggttccagcccgcctgc 222 Query: 214 gtcgccacgct 224 ||| ||||||| Sbjct: 223 gtctccacgct 233 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 314 tctccaccgcgcgctccgtcctcgcctcctccaagaacgtcaacctctccgccgccgcca 373 ||||||| ||||| |||||||||||| ||||| |||||||||||| || |||||||| Sbjct: 317 tctccacggcgcggtccgtcctcgccgcctcctccaacgtcaacctcaccaacgccgcca 376 Query: 374 ccaactgcct 383 |||||||||| Sbjct: 377 ccaactgcct 386
>dbj|AK101962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076D13, full insert sequence Length = 1829 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 154 tacgcggcgtcgctccccgtcctcctcgcctgcaacgccacccgcttccagcccgcctgc 213 ||||||||| ||||| ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 164 tacgcggcgccgctcgccgtcctcctcgcttgcaacgccacgcggttccagcccgcctgc 223 Query: 214 gtcgccacgct 224 ||| ||||||| Sbjct: 224 gtctccacgct 234 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 314 tctccaccgcgcgctccgtcctcgcctcctccaagaacgtcaacctctccgccgccgcca 373 ||||||| ||||| |||||||||||| ||||| |||||||||||| || |||||||| Sbjct: 318 tctccacggcgcggtccgtcctcgccgcctcctccaacgtcaacctcaccaacgccgcca 377 Query: 374 ccaactgcct 383 |||||||||| Sbjct: 378 ccaactgcct 387
>ref|XM_471904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 438 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccaccaa 377 ||||||||||||||||||||| Sbjct: 97 cctctccgccgccgccaccaa 77
>emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1159F04, complete sequence Length = 158330 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccaccaa 377 ||||||||||||||||||||| Sbjct: 72721 cctctccgccgccgccaccaa 72701
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccaccaa 377 ||||||||||||||||||||| Sbjct: 15612664 cctctccgccgccgccaccaa 15612644 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 29232392 cctctccgccgccgccacca 29232373 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 22496435 cctctccgccgccgccacca 22496454 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 15746264 cctctccgccgccgccacca 15746245 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 11122224 cctctccgccgccgccacca 11122243 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 7955122 cctctccgccgccgccacca 7955103 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 7563386 cctctccgccgccgccacca 7563367 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgtcgctccccgtcctcctc 180 |||||||||||||||||||| Sbjct: 4367886 cgtcgctccccgtcctcctc 4367905 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 2836730 cctctccgccgccgccacca 2836711 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 852416 cctctccgccgccgccacca 852435 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 520450 cctctccgccgccgccacca 520469
>ref|XM_481833.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_482465.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_481645.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_480111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_474919.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_474882.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 615 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_478621.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_478148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 603 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_477332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 294 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 205 cctctccgccgccgccacca 186
>ref|NM_186527.1| Oryza sativa (japonica cultivar-group), mRNA Length = 453 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_473631.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 28 cctctccgccgccgccacca 9
>ref|XM_472675.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 738 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_471922.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_471456.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 97 cctctccgccgccgccacca 78
>ref|XM_369116.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00128.4) partial mRNA Length = 1848 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 gaacgtcaacctctccgccgccgc 371 ||||| |||||||||||||||||| Sbjct: 139 gaacgacaacctctccgccgccgc 162
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 68328 cctctccgccgccgccacca 68347
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 104626 cctctccgccgccgccacca 104645
>ref|XM_959012.1| Neurospora crassa OR74A hypothetical protein (NCU02111.1) partial mRNA Length = 3708 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgtcgctccccgtcctcctc 180 |||||||||||||||||||| Sbjct: 3414 cgtcgctccccgtcctcctc 3433
>ref|XM_329300.1| Neurospora crassa OR74A hypothetical protein (NCU02111.1) partial mRNA Length = 3708 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgtcgctccccgtcctcctc 180 |||||||||||||||||||| Sbjct: 3414 cgtcgctccccgtcctcctc 3433
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 56015 cctctccgccgccgccacca 56034
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1234_D05, complete sequence Length = 107476 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 60252 cctctccgccgccgccacca 60271
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 35067427 cctctccgccgccgccacca 35067446
>gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, complete sequence Length = 194736 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gcgcacaattccacactcag 40 |||||||||||||||||||| Sbjct: 192456 gcgcacaattccacactcag 192437
>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence Length = 178858 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gcgcacaattccacactcag 40 |||||||||||||||||||| Sbjct: 153496 gcgcacaattccacactcag 153515
>emb|AL731644.4|OSJN00287 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011K22, complete sequence Length = 145766 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 76194 cctctccgccgccgccacca 76175
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 130879 cctctccgccgccgccacca 130898
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 141851 cctctccgccgccgccacca 141832
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 100190 cctctccgccgccgccacca 100209
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 35438 cctctccgccgccgccacca 35419
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 51416 cctctccgccgccgccacca 51435
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 17246 cctctccgccgccgccacca 17227
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 7076314 cctctccgccgccgccacca 7076295 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 2075148 cctctccgccgccgccacca 2075167
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 15312385 cctctccgccgccgccacca 15312404
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 20335413 cctctccgccgccgccacca 20335394 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 15857610 cctctccgccgccgccacca 15857591 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 14457523 cctctccgccgccgccacca 14457504 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 8530406 cctctccgccgccgccacca 8530425 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 2838822 cctctccgccgccgccacca 2838803
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 21498467 cctctccgccgccgccacca 21498486 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 18012688 cctctccgccgccgccacca 18012707 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 9530519 cctctccgccgccgccacca 9530538 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 6381524 cctctccgccgccgccacca 6381505
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 29502137 cctctccgccgccgccacca 29502118 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 21043802 cctctccgccgccgccacca 21043783 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 18697218 cctctccgccgccgccacca 18697237
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 28469702 cctctccgccgccgccacca 28469721 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 13516206 cctctccgccgccgccacca 13516225
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 35157499 cctctccgccgccgccacca 35157518
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 73077 cctctccgccgccgccacca 73096
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgtcgctccccgtcctcctc 180 |||||||||||||||||||| Sbjct: 115754 cgtcgctccccgtcctcctc 115773
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 acctctccgccgccgccacc 375 |||||||||||||||||||| Sbjct: 323151 acctctccgccgccgccacc 323170
>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077L03 Length = 171177 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 22969 cctctccgccgccgccacca 22988
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 149321 cctctccgccgccgccacca 149340
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 40803 cctctccgccgccgccacca 40784
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 66643 cctctccgccgccgccacca 66624
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 30916 cctctccgccgccgccacca 30897
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 120748 cctctccgccgccgccacca 120729
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 83161 cctctccgccgccgccacca 83142
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 101971 cctctccgccgccgccacca 101952
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 42317 cctctccgccgccgccacca 42336
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 38249 cctctccgccgccgccacca 38268
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 112505 cctctccgccgccgccacca 112524
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 142523 cctctccgccgccgccacca 142542
>dbj|AP005515.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0064M11 Length = 164263 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 90847 cctctccgccgccgccacca 90866
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 36251 cctctccgccgccgccacca 36270
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 37653 cctctccgccgccgccacca 37634
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 11884 cctctccgccgccgccacca 11865
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 59949 cctctccgccgccgccacca 59968
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 52391 cctctccgccgccgccacca 52372
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 101806 cctctccgccgccgccacca 101787
>dbj|AP003963.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1779_B07 Length = 151427 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 38091 cctctccgccgccgccacca 38072
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgtcgctccccgtcctcctc 180 |||||||||||||||||||| Sbjct: 34085 cgtcgctccccgtcctcctc 34104
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 15395322 cctctccgccgccgccacca 15395341
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 7076193 cctctccgccgccgccacca 7076174 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 2075099 cctctccgccgccgccacca 2075118
>emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa0028B04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158885 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 106041 cctctccgccgccgccacca 106060
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 44000 cctctccgccgccgccacca 43981
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 85859 cctctccgccgccgccacca 85840
>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147611 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cctctccgccgccgccacca 376 |||||||||||||||||||| Sbjct: 3899 cctctccgccgccgccacca 3918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,022,599 Number of Sequences: 3902068 Number of extensions: 2022599 Number of successful extensions: 58353 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56178 Number of HSP's gapped (non-prelim): 2175 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)