ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast63f09 |
|---|---|
| Clone Library Name | barley_pub |
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -1 Query: 272 VVGTPFPTPPSSLATTRAPLPSRRWPGAHRQPTPAL 165 V TP PTP ++A P PG HR P+L Sbjct: 1010 VAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSL 1045
>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,| muscle-specific form (Alpha-NAC, muscle-specific form) Length = 2187 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 296 LSSGTT*LVVGTPFPTPPSSLATTRAPLPSRRWP 195 +SS VG P PTPPSSL ++P+ + P Sbjct: 28 MSSALKVAAVGQPGPTPPSSLGPQQSPIVTAHQP 61
>MS116_ASHGO (Q750Q4) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 658 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 103 GRPTMEAAALRPFAAPLGPARRAGV 177 G T A AL+PF APLG RR G+ Sbjct: 6 GIATARAVALQPFRAPLGVIRRFGI 30
>CHLE_MOUSE (Q03311) Cholinesterase precursor (EC 3.1.1.8) (Acylcholine| acylhydrolase) (Choline esterase II) (Butyrylcholine esterase) (Pseudocholinesterase) Length = 603 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -1 Query: 320 SGRV--IPVALSSGTT*LVVGTPFPTPPSSLATTRAPLPSRRWPGAH 186 +GRV + + + GT +G P+ PP + P P +WP H Sbjct: 39 TGRVRGLSMPVLGGTVTAFLGIPYAQPPLGSLRFKKPQPLNKWPDIH 85
>CRF_CANFA (P49926) Corticoliberin precursor (Corticotropin-releasing factor)| (CRF) (Corticotropin-releasing hormone) Length = 196 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -1 Query: 308 IPVALSSGTT*LVVGTPFPTPPSSLATTRAPLPSRRWPGAHRQP 177 +P+ LS+G LVV P PP +R P+P R H QP Sbjct: 3 LPLLLSAGVL-LVVS--LPCPPCRALLSRGPIPGARQAAQHPQP 43
>ACES_CHICK (P36196) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| Length = 767 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -1 Query: 344 LRSLRISTSGRVIPVALSSGTT*LVVGTPFPTPPSSLATTRAPLP 210 +R+ S G +IP S T +G PF PP R PLP Sbjct: 32 VRTTTGSVRGLLIPAGPSGSTAAAFLGIPFAVPPLGPLRFRPPLP 76
>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor| Length = 551 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = -1 Query: 305 PVALSSGTT*LVVGTPFPTPPSSLATTRAPLPSRRWPGAHRQPT 174 PVA S+ T G P P PPS + + +P PS P QP+ Sbjct: 234 PVASSAETQ----GMPSPMPPSPASPSSSPFPSSPSPSPALQPS 273
>SHK1_SCHPO (P50527) Serine/threonine-protein kinase pak1/shk1 (EC 2.7.11.1)| Length = 658 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = -1 Query: 329 ISTSGRVIPVALSSGTT*LVVGTPFPTPPSSLATTRAPLPSRR-----WPGAHRQPTP 171 +S+S + P + +S ++ L P PTPP+S ++ +PL S + A RQP+P Sbjct: 233 LSSSSHLQPTSATSSSSRLYPSRPAPTPPAS--SSSSPLLSSQTVKTTTSNASRQPSP 288
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 7/65 (10%) Frame = -1 Query: 245 PSSLATTRAPLPS-------RRWPGAHRQPTPALLXXXXXXXXXXXXXXSMVGRPPGLTL 87 PSSLA + LPS R PG+ P + + RPPG L Sbjct: 609 PSSLAESHLCLPSAFALSIPRSGPGSDFSPGDSYASDAASGLSDVGEGMGQMRRPPGRNL 668 Query: 86 RRNAR 72 RR R Sbjct: 669 RRRPR 673
>ACES_ANOGA (Q869C3) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| Length = 737 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -1 Query: 269 VGTPFPTPPSSLATTRAPLPSRRWPGAHRQPTP 171 +G P+ PP R P P+ +W G TP Sbjct: 192 LGIPYAQPPVGPLRFRHPRPAEKWTGVLNTTTP 224
>DDAH_STRCO (Q9X7M4) NG,NG-dimethylarginine dimethylaminohydrolase (EC| 3.5.3.18) (Dimethylargininase) (Dimethylarginine dimethylaminohydrolase) Length = 258 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 123 GLHGWPAAGVDPAEEC 76 G HGW VDPA++C Sbjct: 45 GAHGWETLEVDPADDC 60
>SF3A1_ARATH (Q8RXF1) Probable splicing factor 3 subunit 1| Length = 785 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -1 Query: 305 PVALSSGTT*LVVGTPFPTPPSSLATTRAPLPSRRWPGAHR 183 P AL + + P P PP+ P PS ++PGA R Sbjct: 542 PAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQYPGAPR 582
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = -1 Query: 269 VGTPFPTPP---SSLATTRAPLPSRRWPGAHRQPTPAL 165 VG P P PP ++A + APLP +PGA P P + Sbjct: 271 VGQPQPPPPPVGGAVAQSSAPLPP--FPGAATGPQPMM 306
>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi| complex-associated protein of 170 kDa) (GCP170) Length = 1498 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 Query: 260 PFPTPPSSLATTRAPLPSRRWPG 192 PFP PPSSL T +P+ PG Sbjct: 74 PFPDPPSSLDPTTSPVGPDASPG 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,308,257 Number of Sequences: 219361 Number of extensions: 600469 Number of successful extensions: 3237 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3217 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
