ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BTBD5_HUMAN (Q9NXS3) BTB/POZ domain-containing protein 5 30 1.8
2KLHL3_HUMAN (Q9UH77) Kelch-like protein 3 28 5.4
3OSB11_MOUSE (Q8CI95) Oxysterol-binding protein-related protein 1... 28 7.0
4BTBD5_MOUSE (Q9CR40) BTB/POZ domain-containing protein 5 28 7.0
5KLHL6_HUMAN (Q8WZ60) Kelch-like protein 6 27 9.2

>BTBD5_HUMAN (Q9NXS3) BTB/POZ domain-containing protein 5|
          Length = 571

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 210 NSLECYEPGANTWXXXXXXXXXXXXXXXKGFAVVAVAESVYVIGG 344
           NS+EC+ P  NTW                   VV +A  +Y +GG
Sbjct: 354 NSVECWNPDTNTWTSLERMNESRST-----LGVVVLAGELYALGG 393



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>KLHL3_HUMAN (Q9UH77) Kelch-like protein 3|
          Length = 587

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +3

Query: 177 RIYACFAHGAS---NSLECYEPGANTWXXXXXXXXXXXXXXXKGFAVVAVAESVYVIGG 344
           ++YA   H       S+E Y+PG NTW               +   V AV   +YV+GG
Sbjct: 491 QLYATGGHDGPLVRKSVEVYDPGTNTW-----KQVADMNMCRRNAGVCAVNGLLYVVGG 544



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>OSB11_MOUSE (Q8CI95) Oxysterol-binding protein-related protein 11 (OSBP-related|
           protein 11) (ORP-11)
          Length = 751

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 28  DEQQRIEERLRSPAWGPWK 84
           +E+QR EERLR+    PWK
Sbjct: 706 EERQRTEERLRTETGTPWK 724



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>BTBD5_MOUSE (Q9CR40) BTB/POZ domain-containing protein 5|
          Length = 571

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 210 NSLECYEPGANTWXXXXXXXXXXXXXXXKGFAVVAVAESVYVIGG 344
           NS+EC+ P  NTW                   V  +A  V+ +GG
Sbjct: 354 NSVECWNPDTNTWTSLERMNESRST-----LGVAVLAGEVFALGG 393



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>KLHL6_HUMAN (Q8WZ60) Kelch-like protein 6|
          Length = 610

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +3

Query: 204 ASNSLECYEPGANTWXXXXXXXXXXXXXXXKGFAVVAVAESVYVIGGRL 350
           A++  +CY+P  N W               K    V+  + +YV+GG +
Sbjct: 471 ATDKTQCYDPSTNKW-----SLKAAMPVEAKCINAVSFRDRIYVVGGAM 514


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,081,361
Number of Sequences: 219361
Number of extensions: 258499
Number of successful extensions: 1162
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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