ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like ... 33 0.45
2LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like ... 32 0.58
3LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like ... 32 0.58
4Y585_METJA (Q58005) Hypothetical protein MJ0585 32 0.76
5LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like ... 32 0.76
6CRCB_NEIMB (Q9JZG6) Protein crcB homolog 31 1.7
7ACTP_PHOLL (Q7NA72) Cation/acetate symporter actP (Acetate trans... 31 1.7
8TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like... 30 2.2
9CRCB_NEIMA (Q9JUL1) Protein crcB homolog 30 2.2
10ACTP_YERPS (Q66FN0) Cation/acetate symporter actP (Acetate trans... 30 2.9
11ACTP_YERPE (Q8ZJ73) Cation/acetate symporter actP (Acetate trans... 30 2.9
12LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1 30 3.8
13AGAR_STRCO (P07883) Extracellular agarase precursor (EC 3.2.1.81) 29 4.9
14GTR14_HUMAN (Q8TDB8) Solute carrier family 2, facilitated glucos... 29 4.9
15INVO_TARBA (P24711) Involucrin 29 4.9
16GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose... 29 6.4
17APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC) 29 6.4
18SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calciu... 28 8.4
19LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like ... 28 8.4

>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    G+LF L  G +G+W A+++ IL           ++ F  H   W E
Sbjct: 59  LTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFE 118

Query: 435 LPGSLI 452
           +   L+
Sbjct: 119 VLDGLL 124



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>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    G+LF +  G +G+W A+I+ +L           ++ F  H   W E
Sbjct: 58  LTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFE 117

Query: 435 LPGSLI 452
           +   L+
Sbjct: 118 VLDGLL 123



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>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    G+LF L  G +G+W A+++ IL           ++ F  H   W E
Sbjct: 61  LTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFE 120

Query: 435 LPGSLI 452
           +   L+
Sbjct: 121 VLDGLL 126



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>Y585_METJA (Q58005) Hypothetical protein MJ0585|
          Length = 205

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
 Frame = +3

Query: 216 LKWLAFIAAVYLLVLDRTNW---KTNMLT-----GLLVPYIFFTLPGVLFSLIRGEVGAW 371
           +KW   I+ + L ++  T W   K   L      GL+VP++ F +P  LF+++   +  +
Sbjct: 104 MKWFIAISILILGIILATLWILRKDKFLLFLAIFGLIVPFLQFKIPNWLFNILALPLFVY 163

Query: 372 IAFIV 386
           I FIV
Sbjct: 164 IKFIV 168



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>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    G+LF L  G +G+W A+++ +L           +  F  H   W E
Sbjct: 63  LTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKFDFRNHVIQWFE 122

Query: 435 LPGSLI 452
           +   L+
Sbjct: 123 VLDGLL 128



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>CRCB_NEIMB (Q9JZG6) Protein crcB homolog|
          Length = 119

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 141 LGMAARKLANHAIVXXXXXXXXRHFLKWL-AFIAAVYLLVLDRTNWKTNMLTGLL 302
           LG  AR L N A+           F  W+ AF+  ++   ++   WK  ++TG L
Sbjct: 14  LGATARWLLNLAVPASIPPATGNLFANWIGAFLIGIFAETVNHPQWKLLLITGFL 68



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>ACTP_PHOLL (Q7NA72) Cation/acetate symporter actP (Acetate transporter actP)|
           (Acetate permease)
          Length = 549

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 222 WLAFIAAVYLLVLDRTNWKTNMLTGLLVPYIFFTLPGVLFSLIRGEVGAWI 374
           WL  I AV L++L  T W +  + G   P   +  P  LFS+I   +G+W+
Sbjct: 466 WLGLITAVVLMILGPTIWVS--ILGHEKPIYPYEYP-ALFSMIIAFIGSWL 513



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>TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like 1 (EC|
           2.7.11.1) (Tousled-like kinase 1) (PKU-beta)
          Length = 766

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 452 NQRARQL*PVREVTWEEEPQDDHNERNPGTNLSPYQREKHAGQGEEN 312
           NQ+   +   R++  + +P   +N + P TN  P QR+  A  G EN
Sbjct: 333 NQQREDIERQRKLLAKRKPPTANNSQAPSTNSEPKQRKNKAVNGAEN 379



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>CRCB_NEIMA (Q9JUL1) Protein crcB homolog|
          Length = 119

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 141 LGMAARKLANHAIVXXXXXXXXRHFLKWL-AFIAAVYLLVLDRTNWKTNMLTGLL 302
           LG  AR L N A+           F  W  AF+  ++   ++   WK  ++TG L
Sbjct: 14  LGATARWLLNLAVPASLSPATGNLFANWTGAFLIGIFAETVNHPQWKLLLITGFL 68



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>ACTP_YERPS (Q66FN0) Cation/acetate symporter actP (Acetate transporter actP)|
           (Acetate permease)
          Length = 551

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 222 WLAFIAAVYLLVLDRTNWKTNMLTGLLVPYIFFTLPGVLFSLIRGEVGAW 371
           WL    AV L++L  T W T  + G   P   +  P  LFS+I   VG W
Sbjct: 468 WLGLSTAVILMILGPTIWVT--ILGHEKPIYPYEYP-ALFSMIAAFVGTW 514



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>ACTP_YERPE (Q8ZJ73) Cation/acetate symporter actP (Acetate transporter actP)|
           (Acetate permease)
          Length = 551

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 222 WLAFIAAVYLLVLDRTNWKTNMLTGLLVPYIFFTLPGVLFSLIRGEVGAW 371
           WL    AV L++L  T W T  + G   P   +  P  LFS+I   VG W
Sbjct: 468 WLGLSTAVILMILGPTIWVT--ILGHEKPIYPYEYP-ALFSMIAAFVGTW 514



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>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1|
          Length = 492

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    GVL  L  G +G+W A+++ +L            + F  H   W E
Sbjct: 73  LTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQWFE 132

Query: 435 LPGSLI 452
           +   L+
Sbjct: 133 VLDGLL 138



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>AGAR_STRCO (P07883) Extracellular agarase precursor (EC 3.2.1.81)|
          Length = 309

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +2

Query: 278 DQHADGTLGPLHFLHPARRAFLSD-----KGRGWCLDCVHCGH 391
           DQH DG  GP + L+ AR ++++D     +GR      V+CG+
Sbjct: 75  DQHKDGWSGPANSLYSARHSWVADGNLIVEGRRAPDGRVYCGY 117



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>GTR14_HUMAN (Q8TDB8) Solute carrier family 2, facilitated glucose transporter|
           member 14 (Glucose transporter type 14)
          Length = 520

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 267 TNWKTNMLTGLLVPYIFFTLPGVLFSLIRGEVGAWIAF 380
           +NW +N L GLL P   + L   +F +  G +  ++AF
Sbjct: 432 SNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITFLAF 469



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>INVO_TARBA (P24711) Involucrin|
          Length = 387

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
 Frame = -2

Query: 407 EEEPQDDHNERNPGTNLS-PYQREKHAGQ-----------GEENVRDQESRQHVGLPVCP 264
           ++EPQ+   E +PG     P ++E H G+           G++  + QE   H+G     
Sbjct: 86  QQEPQEQ--EVHPGKQQQKPQEQEAHLGKKQEPQGQEVHLGKQQQKTQEQEVHLGKQQQE 143

Query: 263 VQYQEVH 243
           +Q QEVH
Sbjct: 144 LQEQEVH 150



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -2

Query: 407 EEEPQDDHNERNPGTNLSPYQREKHAGQGEENVRDQESRQHVGLPVCPVQYQEVHGG 237
           E + Q+ H  +       P  +E H G+ ++ +++QE   H+G  +   Q QE+H G
Sbjct: 251 ESQEQELHLRKLQQVPQEPQDQELHLGKQQQELQEQE--VHLGKQLQEPQEQELHLG 305



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>GTR3_CANFA (P47842) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 495

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 267 TNWKTNMLTGLLVPYIFFTLPGVLFSLIRGEVGAWIAF 380
           +NW +N L GLL P   F L   +F +  G +  ++ F
Sbjct: 408 SNWTSNFLVGLLFPSAAFYLGAYVFIIFTGFLIVFLVF 445



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>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)|
          Length = 2829

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 407  EEEPQDDHNERNPGTNLSPYQREKHAGQ 324
            EEE Q+D  ER    N+  Y  E+H G+
Sbjct: 1151 EEEQQEDETERQNKYNIKAYASEEHHGE 1178



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>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 407 EEEPQDDHNERNPGTNLSPYQREKHAGQGEENVRDQE 297
           EEE  DD ++    T    +Q  +H G  EE   D +
Sbjct: 318 EEEDDDDDDDEGDSTESDRHQAHRHRGHREEEDEDDD 354



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>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
 Frame = +3

Query: 297 LLVPYIFFTL---PGVLFSLIRGEVGAWIAFIVVIL-----------RLFFPRHFPDWLE 434
           L +PY F  L    G+L  +  G +G+W A+++ +L            + F  H   W E
Sbjct: 65  LTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFE 124

Query: 435 LPGSLI 452
           +   L+
Sbjct: 125 VLDGLL 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,312,208
Number of Sequences: 219361
Number of extensions: 706373
Number of successful extensions: 2641
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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