ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468372.1| Oryza sativa (japonica cultivar-group), mRNA 125 1e-25
2dbj|AK068166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
4dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
5dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
6ref|XM_466799.1| Oryza sativa (japonica cultivar-group), mRNA 78 3e-11
7ref|NM_196959.1| Oryza sativa (japonica cultivar-group) putative... 76 1e-10
8dbj|AK121097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
9dbj|AK100751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
10gb|AF143746.1|AF143746 Oryza sativa CER1 (CER1) mRNA, complete cds 76 1e-10
11dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13gb|AY104752.1| Zea mays PCO127123 mRNA sequence 72 2e-09
14dbj|AK066386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
15gb|AY022407.1| Oryza sativa microsatellite MRG4732 containing (A... 58 3e-05
16dbj|AB017041.1| Blastochloris sulfoviridis gene for photosynthet... 46 0.095
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.5
18gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence 42 1.5
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 42 1.5
21gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... 42 1.5
22dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.5
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
24dbj|AB026892.1| Achromobacter xylosoxidans subsp. xylosoxidans g... 42 1.5
25ref|NM_191507.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
26gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 5.9
27gb|AY387493.1| Zea mays putative glutathione transporter (GT1) m... 40 5.9
28gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 5.9
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.9
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
31dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
32gb|AC002378.1|AC002378 Human PAC clone RP3-438O4 from 22q12.1-qt... 40 5.9
33gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.9 
>ref|XM_468372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2219

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 84  atggcctccaagcccggccctctcacccggtggccatggcacgacatgggaaactacaag 143
           |||||||| ||||| || |||||||| | |||||| |||||  || | ||||||||||||
Sbjct: 98  atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 157

                                                                  
Query: 144 tacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 198
           ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 158 tacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 212



 Score =  121 bits (61), Expect = 2e-24
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctgctctacacccagctctggatctccgtctcccgccaccagaccgcccgctccaagcac 320
           |||||||||  ||||||||||||| ||||||||||||||||||| |||||   |||||||
Sbjct: 272 ctgctctacggccagctctggatcaccgtctcccgccaccagactgcccggagcaagcac 331

                                                                       
Query: 321 cgcatcgtcagcaagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgac 380
              ||||||| |||||||||||| ||||| ||  ||||| | ||  | |||||||| |||
Sbjct: 332 aagatcgtcaacaagagcctcgacttcgaacaaatcgacagggaaagaaactgggatgac 391

                                                
Query: 381 cagatcatcctgacggcgctgctgttctacgtggtga 417
           ||||| ||||||||||||||| |||||||| ||||||
Sbjct: 392 cagataatcctgacggcgctggtgttctacttggtga 428
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>dbj|AK068166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134I09, full
           insert sequence
          Length = 2219

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 84  atggcctccaagcccggccctctcacccggtggccatggcacgacatgggaaactacaag 143
           |||||||| ||||| || |||||||| | |||||| |||||  || | ||||||||||||
Sbjct: 98  atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 157

                                                                  
Query: 144 tacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 198
           ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 158 tacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 212



 Score =  121 bits (61), Expect = 2e-24
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctgctctacacccagctctggatctccgtctcccgccaccagaccgcccgctccaagcac 320
           |||||||||  ||||||||||||| ||||||||||||||||||| |||||   |||||||
Sbjct: 272 ctgctctacggccagctctggatcaccgtctcccgccaccagactgcccggagcaagcac 331

                                                                       
Query: 321 cgcatcgtcagcaagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgac 380
              ||||||| |||||||||||| ||||| ||  ||||| | ||  | |||||||| |||
Sbjct: 332 aagatcgtcaacaagagcctcgacttcgaacaaatcgacagggaaagaaactgggatgac 391

                                                
Query: 381 cagatcatcctgacggcgctgctgttctacgtggtga 417
           ||||| ||||||||||||||| |||||||| ||||||
Sbjct: 392 cagataatcctgacggcgctggtgttctacttggtga 428
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                         
Query: 142      agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 198
                ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 34912096 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 34912040



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                            
Query: 261      ctgctctacacccagctctggatctccgtctcccgccaccagaccgcccgctccaagcac 320
                |||||||||  ||||||||||||| ||||||||||||||||||| |||||   |||||||
Sbjct: 34911980 ctgctctacggccagctctggatcaccgtctcccgccaccagactgcccggagcaagcac 34911921

                                             
Query: 321      cgcatcgtcagcaagagcctcgatttcga 349
                   ||||||| |||||||||||| |||||
Sbjct: 34911920 aagatcgtcaacaagagcctcgacttcga 34911892



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                            
Query: 272      ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 331
                |||| ||||||||  | |||||||| ||||||||||||||  ||||||||||||||||  
Sbjct: 24742970 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 24742911

                                                    
Query: 332      caagagcctcgatttcgaccaggtcgaccgcgagcg 367
                |    || |||| |||||||||||||||||||||||
Sbjct: 24742910 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 24742875



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 373      gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 417
                |||| |||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 34911585 gggatgaccagataatcctgacggcgctggtgttctacttggtga 34911541



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 84       atggcctccaagcccggccctctcacccggtggccatggcacgacatgggaaactacaag 143
                |||||||| ||||| || |||||||| | |||||| |||||  || | ||||||||||||
Sbjct: 34912270 atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 34912211
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>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0053L11
          Length = 147123

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                       
Query: 142    agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 198
              ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 133691 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 133635



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                          
Query: 261    ctgctctacacccagctctggatctccgtctcccgccaccagaccgcccgctccaagcac 320
              |||||||||  ||||||||||||| ||||||||||||||||||| |||||   |||||||
Sbjct: 133575 ctgctctacggccagctctggatcaccgtctcccgccaccagactgcccggagcaagcac 133516

                                           
Query: 321    cgcatcgtcagcaagagcctcgatttcga 349
                 ||||||| |||||||||||| |||||
Sbjct: 133515 aagatcgtcaacaagagcctcgacttcga 133487



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 373    gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 417
              |||| |||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 133180 gggatgaccagataatcctgacggcgctggtgttctacttggtga 133136



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                          
Query: 84     atggcctccaagcccggccctctcacccggtggccatggcacgacatgggaaactacaag 143
              |||||||| ||||| || |||||||| | |||||| |||||  || | ||||||||||||
Sbjct: 133865 atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 133806
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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_E04
          Length = 118192

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 142   agtacgcgctggtggcgccgtgggcggcgtacagcacgtacaggttcgcggcggcga 198
             ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 71593 agtacgcgctggtggcgccgtcggcggcgtacagcacgtacaggttcgtgacggcga 71537



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                         
Query: 261   ctgctctacacccagctctggatctccgtctcccgccaccagaccgcccgctccaagcac 320
             |||||||||  ||||||||||||| ||||||||||||||||||| |||||   |||||||
Sbjct: 71477 ctgctctacggccagctctggatcaccgtctcccgccaccagactgcccggagcaagcac 71418

                                          
Query: 321   cgcatcgtcagcaagagcctcgatttcga 349
                ||||||| |||||||||||| |||||
Sbjct: 71417 aagatcgtcaacaagagcctcgacttcga 71389



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 373   gggacgaccagatcatcctgacggcgctgctgttctacgtggtga 417
             |||| |||||||| ||||||||||||||| |||||||| ||||||
Sbjct: 71082 gggatgaccagataatcctgacggcgctggtgttctacttggtga 71038



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 84    atggcctccaagcccggccctctcacccggtggccatggcacgacatgggaaactacaag 143
             |||||||| ||||| || |||||||| | |||||| |||||  || | ||||||||||||
Sbjct: 71767 atggcctctaagccagggcctctcactcagtggccgtggcataaccttggaaactacaag 71708
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>ref|XM_466799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2481

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 331
           |||| ||||||||  | |||||||| ||||||||||||||  ||||||||||||||||  
Sbjct: 291 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 350

                                                                  
Query: 332 caagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatc 386
           |    || |||| |||||||||||||||||||||||   |||||| |||||||||
Sbjct: 351 ccgcggcatcgagttcgaccaggtcgaccgcgagcgaggctgggatgaccagatc 405
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>ref|NM_196959.1| Oryza sativa (japonica cultivar-group) putative CER1
           (OSJNBa0079L16.17), mRNA
          Length = 2195

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 340 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 393
           |||| ||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 339 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 392
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>dbj|AK121097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L20, full
           insert sequence
          Length = 786

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 340 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 393
           |||| ||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 347 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 400
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>dbj|AK100751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118L15, full
           insert sequence
          Length = 2339

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 340 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 393
           |||| ||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 435 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 488
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>gb|AF143746.1|AF143746 Oryza sativa CER1 (CER1) mRNA, complete cds
          Length = 2211

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 340 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcctga 393
           |||| ||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 332 tcgagttcgaccaggttgaccgcgagaggaactgggacgaccagatcatcctga 385
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>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1372_D06
          Length = 129242

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                          
Query: 272    ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 331
              |||| ||||||||  | |||||||| ||||||||||||||  ||||||||||||||||  
Sbjct: 124368 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 124309

                                                  
Query: 332    caagagcctcgatttcgaccaggtcgaccgcgagcg 367
              |    || |||| |||||||||||||||||||||||
Sbjct: 124308 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 124273
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>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                         
Query: 272   ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 331
             |||| ||||||||  | |||||||| ||||||||||||||  ||||||||||||||||  
Sbjct: 42618 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 42559

                                                 
Query: 332   caagagcctcgatttcgaccaggtcgaccgcgagcg 367
             |    || |||| |||||||||||||||||||||||
Sbjct: 42558 ccgcggcatcgagttcgaccaggtcgaccgcgagcg 42523
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>gb|AY104752.1| Zea mays PCO127123 mRNA sequence
          Length = 2262

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 340 tcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatcatcct 391
           |||| ||||||||||||||||| ||||||  |||||||||||||||||||||
Sbjct: 334 tcgagttcgaccaggtcgaccgggagcgcggctgggacgaccagatcatcct 385
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>dbj|AK066386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066F17, full
           insert sequence
          Length = 2481

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                       
Query: 272 ccagctctggatctccgtctcccgccaccagaccgcccgctccaagcaccgcatcgtcag 331
           |||| ||||||||  | |||||||| ||||||||||||||  ||||||||||||||||  
Sbjct: 291 ccagatctggatcagcctctcccgctaccagaccgcccgcagcaagcaccgcatcgtcga 350

                                                                  
Query: 332 caagagcctcgatttcgaccaggtcgaccgcgagcgcaactgggacgaccagatc 386
           |    || |||| |||| ||||||||||||||||||   |||||| |||||||||
Sbjct: 351 ccgcggcatcgagttcggccaggtcgaccgcgagcgaggctgggatgaccagatc 405
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>gb|AY022407.1| Oryza sativa microsatellite MRG4732 containing (ACA)X8, closest to
           marker S10844, genomic sequence
          Length = 224

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 299 ccagaccgcccgctccaagcaccgcatcgtcagcaagagcctcgatttcgaccaggtcga 358
           |||||||||||||  ||||||||||||||||  |    || |||| ||||||||||||||
Sbjct: 1   ccagaccgcccgcagcaagcaccgcatcgtcgaccgcggcatcgagttcgaccaggtcga 60

                    
Query: 359 ccgcgagcg 367
           |||||||||
Sbjct: 61  ccgcgagcg 69
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>dbj|AB017041.1| Blastochloris sulfoviridis gene for photosynthetic reaction center L
            subunit, photosynthetic reaction center M subunit
          Length = 1500

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 151  tggtggcgccgtgggcggcgtacagca 177
            |||||||||||||||||||| ||||||
Sbjct: 1417 tggtggcgccgtgggcggcgaacagca 1391
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 157     cgccgtgggcggcgtacagca 177
               |||||||||||||||||||||
Sbjct: 4287824 cgccgtgggcggcgtacagca 4287804
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>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence
          Length = 199866

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    gcggcgtacagcacgtacagg 185
              |||||||||||||||||||||
Sbjct: 154333 gcggcgtacagcacgtacagg 154353
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 373      gggacgaccagatcatcctga 393
                |||||||||||||||||||||
Sbjct: 16938828 gggacgaccagatcatcctga 16938808
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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
              sequence
          Length = 147452

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 373    gggacgaccagatcatcctga 393
              |||||||||||||||||||||
Sbjct: 123280 gggacgaccagatcatcctga 123260
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>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence
          Length = 203591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    cgaacaatggcctccaagccc 98
             |||||||||||||||||||||
Sbjct: 86024 cgaacaatggcctccaagccc 86004
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>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete
              sequence
          Length = 200108

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     cgaacaatggcctccaagccc 98
              |||||||||||||||||||||
Sbjct: 185391 cgaacaatggcctccaagccc 185411
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 373      gggacgaccagatcatcctga 393
                |||||||||||||||||||||
Sbjct: 16947868 gggacgaccagatcatcctga 16947848
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>dbj|AB026892.1| Achromobacter xylosoxidans subsp. xylosoxidans gene for
           low-specificity D-threonine aldolase, complete cds
          Length = 1396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 227 cagcctcttcgtgctgtccac 247
           |||||||||||||||||||||
Sbjct: 970 cagcctcttcgtgctgtccac 990
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>ref|NM_191507.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 ggtggcgccgtgggcggcgt 171
           ||||||||||||||||||||
Sbjct: 880 ggtggcgccgtgggcggcgt 899
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 146     cgcgctggtggcgccgtggg 165
               ||||||||||||||||||||
Sbjct: 1264486 cgcgctggtggcgccgtggg 1264505
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>gb|AY387493.1| Zea mays putative glutathione transporter (GT1) mRNA, partial cds
          Length = 2379

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgctggtggcgccgtgggcg 167
           ||||||||||||||||||||
Sbjct: 794 cgctggtggcgccgtgggcg 813
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 70      ccgagctccgaacaatggcc 89
               ||||||||||||||||||||
Sbjct: 1998993 ccgagctccgaacaatggcc 1999012
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     tctcccgccaccagaccgcc 308
               ||||||||||||||||||||
Sbjct: 1259298 tctcccgccaccagaccgcc 1259279
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      ggtggcgccgtgggcggcgt 171
                ||||||||||||||||||||
Sbjct: 33163187 ggtggcgccgtgggcggcgt 33163168
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>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1100D10
          Length = 152997

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    ggtggcgccgtgggcggcgt 171
              ||||||||||||||||||||
Sbjct: 100097 ggtggcgccgtgggcggcgt 100078
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>gb|AC002378.1|AC002378 Human PAC clone RP3-438O4 from 22q12.1-qter, complete sequence
          Length = 77516

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    agctacgagcaacagagcag 56
             ||||||||||||||||||||
Sbjct: 55110 agctacgagcaacagagcag 55129
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     gtacaggttcgcggcggcga 198
               ||||||||||||||||||||
Sbjct: 1086759 gtacaggttcgcggcggcga 1086740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,660,171
Number of Sequences: 3902068
Number of extensions: 2660171
Number of successful extensions: 53851
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53299
Number of HSP's gapped (non-prelim): 550
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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