ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast63e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 159 bits (80), Expect = 5e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20924842 tcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 20924783 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||| |||||||||| ||||||||||||| Sbjct: 20924782 gccggcaagtacgccgagcgcgtcggcgccggcgcccccg 20924743 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 14469030 tccaaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaag 14468971 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| |||||||| |||| Sbjct: 14468970 tacgccgagcgcgtcggcgccggcgctcccg 14468940
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 159 bits (80), Expect = 5e-36 Identities = 95/100 (95%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 tcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 227 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||| |||||||||| ||||||||||||| Sbjct: 228 gccggcaagtacgccgagcgcgtcggcgccggcgcccccg 267
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 159 bits (80), Expect = 5e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20851056 tcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 20850997 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||| |||||||||| ||||||||||||| Sbjct: 20850996 gccggcaagtacgccgagcgcgtcggcgccggcgcccccg 20850957 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 14423314 tccaaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaag 14423255 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| |||||||| |||| Sbjct: 14423254 tacgccgagcgcgtcggcgccggcgctcccg 14423224
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 159 bits (80), Expect = 5e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10332 tcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 10273 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||| |||||||||| ||||||||||||| Sbjct: 10272 gccggcaagtacgccgagcgcgtcggcgccggcgcccccg 10233
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 159 bits (80), Expect = 5e-36 Identities = 95/100 (95%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34153 tcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 34212 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||| |||||||||| ||||||||||||| Sbjct: 34213 gccggcaagtacgccgagcgcgtcggcgccggcgcccccg 34252
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 38069 tcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaag 38128 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 |||||||||||| |||||||||| ||||||||||||| Sbjct: 38129 gccggcaagtacgcggagcgcgtcggcgccggcgcccccg 38168
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 141363 tcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaag 141304 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 |||||||||||| |||||||||| ||||||||||||| Sbjct: 141303 gccggcaagtacgcggagcgcgtcggcgccggcgcccccg 141264
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 181223 tcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaag 181282 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 |||||||||||| |||||||||| ||||||||||||| Sbjct: 181283 gccggcaagtacgcggagcgcgtcggcgccggcgcccccg 181322
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 28997928 tcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaag 28997987 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 |||||||||||| |||||||||| ||||||||||||| Sbjct: 28997988 gccggcaagtacgcggagcgcgtcggcgccggcgcccccg 28998027 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 9471624 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 9471565 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 |||||||||| |||| |||||||||||| Sbjct: 9471564 cgcccagcgcatcggcaccggcgcccccg 9471536 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| ||||| |||||||||||||| |||| Sbjct: 2463971 caaggccgggctccaattccccgtcggccgtatcg 2464005
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 29089350 tcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccgctacctcaag 29089409 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 |||||||||||| |||||||||| ||||||||||||| Sbjct: 29089410 gccggcaagtacgcggagcgcgtcggcgccggcgcccccg 29089449 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 9469745 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 9469686 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 |||||||||| |||| |||||||||||| Sbjct: 9469685 cgcccagcgcatcggcaccggcgcccccg 9469657 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| ||||| |||||||||||||| |||| Sbjct: 2464081 caaggccgggctccaattccccgtcggccgtatcg 2464115
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 111 bits (56), Expect = 1e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagtac 235 |||||||| ||||||||||||||||||||||||||| | ||||||||| |||||||||| Sbjct: 177 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 236 Query: 236 gcccagcgcgtcggtgccggcgcccccg 263 || |||||||||| ||||||||||||| Sbjct: 237 gcggagcgcgtcggcgccggcgcccccg 264
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 101 bits (51), Expect = 1e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | |||||| | | ||||||| ||||||| Sbjct: 61 tccaaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaag 120 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 121 tacgccgagcgcgtcggcgccggcgcccccg 151
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 101 bits (51), Expect = 1e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | |||||| | | ||||||| ||||||| Sbjct: 20566120 tccaaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaag 20566179 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 20566180 tacgccgagcgcgtcggcgccggcgcccccg 20566210
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 101 bits (51), Expect = 1e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | |||||| | | ||||||| ||||||| Sbjct: 70081 tccaaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaag 70140 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 70141 tacgccgagcgcgtcggcgccggcgcccccg 70171
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 101 bits (51), Expect = 1e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | |||||| | | ||||||| ||||||| Sbjct: 40492 tccaaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaag 40551 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 40552 tacgccgagcgcgtcggcgccggcgcccccg 40582
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 176 tccaaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaag 235 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| |||||||| |||| Sbjct: 236 tacgccgagcgcgtcggcgccggcgctcccg 266
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 175 tccaaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaag 234 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| |||||||| |||| Sbjct: 235 tacgccgagcgcgtcggcgccggcgctcccg 265
>gb|AY104828.1| Zea mays PCO072413 mRNA sequence Length = 741 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | || ||||||| ||||||| |||||| Sbjct: 118 tccaaggccggactccagttccccgtcggcaggattgccaggttcctcaaggcgggcaag 177 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 ||||| |||||||||| ||||||||||||| Sbjct: 178 tacgcggagcgcgtcggcgccggcgcccccg 208
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||| Sbjct: 48262 tccaaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaag 48321 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| |||||||| |||| Sbjct: 48322 tacgccgagcgcgtcggcgccggcgctcccg 48352
>gb|AY110108.1| Zea mays CL14299_1 mRNA sequence Length = 712 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| |||||||||| || ||||||||||||||||||||||| | ||||||||| Sbjct: 583 tcgcggtcgaccaaggccgggctgcagttccccgtcggccgcatcgcgcgctacctcaag 524 Query: 224 atcggcaagtacgcccagcgcgtcgg 249 ||||||||||||| |||||||||| Sbjct: 523 gccggcaagtacgccgagcgcgtcgg 498
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 89.7 bits (45), Expect = 4e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| ||||||||||||||||||||||||| | | |||||||||| ||| || Sbjct: 90 caaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgcta 149 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||||| |||||||||||| Sbjct: 150 cgcccagcgcgtcggcaccggcgcccccg 178
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 4e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| ||||||||||||||||||||||||| | | |||||||||| ||| || Sbjct: 707025 caaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgcta 707084 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||||| |||||||||||| Sbjct: 707085 cgcccagcgcgtcggcaccggcgcccccg 707113 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 22512703 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 22512644 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 22512643 ctcccagcgcatcggcaccggcgcccccg 22512615 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 cgactccggccatctctccggc 67 |||||||||||||||||||||| Sbjct: 4678078 cgactccggccatctctccggc 4678099
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 89.7 bits (45), Expect = 4e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| ||||||||||||||||||||||||| | | |||||||||| ||| || Sbjct: 167 caaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgcta 226 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||||| |||||||||||| Sbjct: 227 cgcccagcgcgtcggcaccggcgcccccg 255
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 89.7 bits (45), Expect = 4e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| ||||||||||||||||||||||||| | | |||||||||| ||| || Sbjct: 52224 caaggccgggctccagttccccgtcggccgcatcggccgctacctcaagaagggccgcta 52283 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||||| |||||||||||| Sbjct: 52284 cgcccagcgcgtcggcaccggcgcccccg 52312
>emb|X94693.1|TAH2A254 T.aestivum histone H2A gene Length = 2241 Score = 85.7 bits (43), Expect = 6e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 |||||||| || || ||||||||||| || | |||||||||| ||||||| ||||||| Sbjct: 1163 tccaaggctgggctgcagttccccgtgggaaggatcgccaggttcctcaaggccggcaag 1222 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 1223 tacgccgagcgcgtcggagccggcgcccccg 1253
>gb|L75824.1|WHTHIH2AA Triticum aestivum histone H2A gene, complete cds Length = 2241 Score = 85.7 bits (43), Expect = 6e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 |||||||| || || ||||||||||| || | |||||||||| ||||||| ||||||| Sbjct: 1163 tccaaggctgggctgcagttccccgtgggaaggatcgccaggttcctcaaggccggcaag 1222 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||||||||||| Sbjct: 1223 tacgccgagcgcgtcggagccggcgcccccg 1253
>dbj|D38091.1|WHTPH2AE Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-10 Length = 691 Score = 85.7 bits (43), Expect = 6e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | ||||| ||| ||||||| ||||||| Sbjct: 145 tccaaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaag 204 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| || | ||||| ||||||||||||| Sbjct: 205 tacgccgagagggtcggcgccggcgcccccg 235
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 85.7 bits (43), Expect = 6e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||||||| | ||||| ||| ||||||| ||||||| Sbjct: 143 tccaaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaag 202 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| || | ||||| ||||||||||||| Sbjct: 203 tacgccgagagggtcggcgccggcgcccccg 233
>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and histone H2A genes, complete cds Length = 4358 Score = 83.8 bits (42), Expect = 3e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 174 ccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagt 233 ||||||||||||| ||||||||||| |||||||| || | ||||| |||| ||||||| Sbjct: 3859 ccaaggccggcctgcagttccccgttggccgcattgcgcgctacctgaagaagggcaagt 3918 Query: 234 acgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||| ||||||||||||| |||| Sbjct: 3919 acgccgagcgcatcggtgccggcgcgcccg 3948
>gb|BT016168.1| Zea mays clone Contig1 mRNA sequence Length = 676 Score = 79.8 bits (40), Expect = 4e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| |||||||| || || |||||||||||||| |||||||| ||||||||||| Sbjct: 150 tcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcggtacctcaag 209 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||| ||||| || |||||||||| ||||| ||||||| Sbjct: 210 gccgggaagtatgcggagcgcgtcggcgccggggcccccg 249
>gb|AY105006.1| Zea mays PCO108932 mRNA sequence Length = 841 Score = 79.8 bits (40), Expect = 4e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 |||||||| |||||||| || || |||||||||||||| |||||||| ||||||||||| Sbjct: 138 tcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcggtacctcaag 197 Query: 224 atcggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||| ||||| || |||||||||| ||||| ||||||| Sbjct: 198 gccgggaagtatgcggagcgcgtcggcgccggggcccccg 237
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 79.8 bits (40), Expect = 4e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagtac 235 |||||||| ||||||||||||||||||||||||| | |||||||||| ||| ||| Sbjct: 114 aaggccgggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctac 173 Query: 236 gcccagcgcgtcggtgccggcgcccccg 263 |||||||||||||| |||||||||||| Sbjct: 174 gcccagcgcgtcggctccggcgcccccg 201
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || ||||||||||| ||| | ||||| |||| ||||||| ||| ||| Sbjct: 210 tccaaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaag 269 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||| ||||||| Sbjct: 270 tacgccgagcgcgtcggcgccggggcccccg 300
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || ||||||||||| ||| | ||||| |||| ||||||| ||| ||| Sbjct: 21536449 tccaaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaag 21536508 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||| ||||||| Sbjct: 21536509 tacgccgagcgcgtcggcgccggggcccccg 21536539 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||| ||| | |||||| ||| | | ||| ||||||| Sbjct: 21539129 tccaaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaag 21539188 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 |||||| || | ||||| ||||||||||| Sbjct: 21539189 tacgccgagagggtcggcgccggcgcccc 21539217
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || ||||||||||| ||| | ||||| |||| ||||||| ||| ||| Sbjct: 74233 tccaaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaag 74292 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||| ||||||| Sbjct: 74293 tacgccgagcgcgtcggcgccggggcccccg 74323 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||| ||| | |||||| ||| | | ||| ||||||| Sbjct: 76913 tccaaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaag 76972 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 |||||| || | ||||| ||||||||||| Sbjct: 76973 tacgccgagagggtcggcgccggcgcccc 77001
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || ||||||||||| ||| | ||||| |||| ||||||| ||| ||| Sbjct: 210 tccaaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaag 269 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||| ||||||| Sbjct: 270 tacgccgagcgcgtcggcgccggggcccccg 300
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| || ||||||||||| ||| | ||||| |||| ||||||| ||| ||| Sbjct: 211 tccaaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaag 270 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| |||||||||| ||||| ||||||| Sbjct: 271 tacgccgagcgcgtcggcgccggggcccccg 301
>gb|AY108339.1| Zea mays PCO070432 mRNA sequence Length = 811 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| ||||||||||| || || | |||||||||| ||||||| ||||||| Sbjct: 171 tccaaggccgggctccagttcccagtgggaaggatcgccaggttcctcaaggccggcaag 230 Query: 233 tacgcccagcgcgtcggtgccggcgcccccg 263 |||||| || | ||||| ||||||||||||| Sbjct: 231 tacgccgagagggtcggcgccggcgcccccg 261
>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV), and histone H2B (ch2b-IV) genes, complete cds Length = 4502 Score = 75.8 bits (38), Expect = 6e-11 Identities = 77/90 (85%) Strand = Plus / Minus Query: 174 ccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagt 233 ||||||||||||| |||||||| || |||||||| || | ||||| |||| ||||||| Sbjct: 3416 ccaaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagt 3357 Query: 234 acgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||| ||||||||||||| |||| Sbjct: 3356 acgccgagcgcatcggtgccggcgcgcccg 3327
>gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-III), histone H4 (ch4-III), histone H2B (ch2b-III) and histone H2A (ch2a-III) genes, complete cds Length = 4582 Score = 75.8 bits (38), Expect = 6e-11 Identities = 77/90 (85%) Strand = Plus / Plus Query: 174 ccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagt 233 ||||||||||||| |||||||| || |||||||| || | ||||| |||| ||||||| Sbjct: 3157 ccaaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagt 3216 Query: 234 acgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||| ||||||||||||| |||| Sbjct: 3217 acgccgagcgcatcggtgccggcgcgcccg 3246
>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II), histone H2B (ch2b-II) and histone H2A (ch2a-II) genes, complete cds Length = 3777 Score = 75.8 bits (38), Expect = 6e-11 Identities = 77/90 (85%) Strand = Plus / Plus Query: 174 ccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagt 233 ||||||||||||| |||||||| || |||||||| || | ||||| |||| ||||||| Sbjct: 3278 ccaaggccggcctgcagttccctgtgggccgcattgcacgctacctgaagaagggcaagt 3337 Query: 234 acgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||| ||||||||||||| |||| Sbjct: 3338 acgccgagcgcatcggtgccggcgcgcccg 3367
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 169024 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 168965 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 |||||||||| |||| |||||||||||| Sbjct: 168964 cgcccagcgcatcggcaccggcgcccccg 168936
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 189 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 248 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 |||||||||| |||| |||||||||||| Sbjct: 249 cgcccagcgcatcggcaccggcgcccccg 277
>gb|AY104637.1| Zea mays PCO070433 mRNA sequence Length = 767 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 |||||||| ||||||||||||||||| || | |||||||||| ||||||| ||||||| Sbjct: 171 tccaaggctggcctccagttccccgtgggaaggatcgccaggttcctcaaggccggcaag 230 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 || ||| || | ||||| ||||||||||| Sbjct: 231 tatgccgagagagtcggcgccggcgcccc 259
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 73.8 bits (37), Expect = 2e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| || |||||||||||||||||||||| | |||||||||| ||| || Sbjct: 136 caaggccgggctgcagttccccgtcggccgcatcgggcgctacctcaagaagggccgcta 195 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||||||||||||||| |||||||||||| Sbjct: 196 cgcccagcgcgtcggctccggcgcccccg 224
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagtac 235 |||||||| ||||||||||||||||||||||||| | |||||||||| ||| ||| Sbjct: 1841 aaggccgggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctac 1900 Query: 236 gcccagcgcgtcggtgccggcgcccccg 263 ||||||||| |||| |||||||||||| Sbjct: 1901 gcccagcgcatcggctccggcgcccccg 1928
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 71.9 bits (36), Expect = 1e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagtac 235 |||||||| ||||||||||||||||||||||||| | |||||||||| ||| ||| Sbjct: 1841 aaggccgggctccagttccccgtcggccgcatcgggcgctacctcaagaagggccgctac 1900 Query: 236 gcccagcgcgtcggtgccggcgcccccg 263 ||||||||| |||| |||||||||||| Sbjct: 1901 gcccagcgcatcggctccggcgcccccg 1928
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 99 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 158 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| |||||| |||| |||||||||||| Sbjct: 159 cgcgcagcgcatcggcaccggcgcccccg 187
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||| ||| | |||||| ||| | | ||| ||||||| Sbjct: 216 tccaaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaag 275 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 |||||| || | ||||| ||||||||||| Sbjct: 276 tacgccgagagggtcggcgccggcgcccc 304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 17416738 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 17416797 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| |||||| |||| |||||||||||| Sbjct: 17416798 cgcgcagcgcatcggcaccggcgcccccg 17416826
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | |||||||||| ||| || Sbjct: 70130 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagaagggccgcta 70189 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| |||||| |||| |||||||||||| Sbjct: 70190 cgcgcagcgcatcggcaccggcgcccccg 70218
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full insert sequence Length = 830 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 ||||||||||| |||||||||||||| ||| | |||||| ||| | | ||| ||||||| Sbjct: 216 tccaaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaag 275 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 |||||| || | ||||| ||||||||||| Sbjct: 276 tacgccgagagggtcggcgccggcgcccc 304
>gb|AY104826.1| Zea mays PCO099353 mRNA sequence Length = 793 Score = 65.9 bits (33), Expect = 6e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 173 tccaaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaag 232 |||||||| || || ||||| ||||||||| | ||||| ||| ||||||| ||||||| Sbjct: 160 tccaaggctgggctgcagtttcccgtcggcaggatcgctcggttcctcaaggccggcaag 219 Query: 233 tacgcccagcgcgtcggtgccggcgcccc 261 |||||| ||||||| || ||||||||||| Sbjct: 220 tacgccgagcgcgtgggcgccggcgcccc 248
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcg 209 |||||||| ||||||||||||||||||||||||| Sbjct: 150 aaggccgggctccagttccccgtcggccgcatcg 183
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcg 209 |||||||| ||||||||||||||||||||||||| Sbjct: 187 aaggccgggctccagttccccgtcggccgcatcg 220
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcg 209 |||||||| ||||||||||||||||||||||||| Sbjct: 135 aaggccgggctccagttccccgtcggccgcatcg 168
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcg 209 |||||||| ||||||||||||||||||||||||| Sbjct: 168 aaggccggtctccagttccccgtcggccgcatcg 201
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 93 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 152 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 153 ctcccagcgcatcggcaccggcgcccccg 181
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| || ||||| |||||||||||||||| ||||||| |||| ||| ||| Sbjct: 192 caaggccgggctgcagtttcccgtcggccgcatcgggcggtacctgaagaagggccggta 251 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| ||||||||||| | |||||||||| Sbjct: 252 cgcgcagcgcgtcggcacgggcgcccccg 280
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 7753 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 7694 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 7693 ctcccagcgcatcggcaccggcgcccccg 7665
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 102110 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 102051 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 102050 ctcccagcgcatcggcaccggcgcccccg 102022
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 163 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 222 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 223 ctcccagcgcatcggcaccggcgcccccg 251
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| |||||||||||||||||||| |||| | | ||||||||| ||| || Sbjct: 164 caaggccgggctccagttccccgtcggccgtatcggccgctacctcaagcaaggccgcta 223 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 | |||||||| |||| |||||||||||| Sbjct: 224 ctcccagcgcatcggcaccggcgcccccg 252
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| || ||||| |||||||||||||||| ||||||| |||| ||| ||| Sbjct: 192 caaggccgggctgcagtttcccgtcggccgcatcgggcggtacctgaagaagggccggta 251 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| ||||||||||| | |||||||||| Sbjct: 252 cgcgcagcgcgtcggcacgggcgcccccg 280
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 ||||||||||||||||||||||| ||||| |||| | | ||||||||| Sbjct: 98 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaag 145
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 aaggccggcctccagttccccgtcggccgcatcgccaggtacctcaag 223 ||||||||||||||||||||||| ||||| |||| | | ||||||||| Sbjct: 169 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaag 216
>gb|AF013803.1| Pinus taeda H2A homolog (lp15) gene, complete cds Length = 781 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||||||||||||||| || ||| | |||||| ||| ||||||| ||||||||| Sbjct: 138 caaggccggcctccagttccctgtgggcagaatcgcccggttcctcaaggccggcaagta 197
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcgg 201 ||||||||||||||||||||||||||| Sbjct: 99 caaggccggcctccagttccccgtcgg 125
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| |||||||||||||||||||| |||| Sbjct: 7800502 caaggccgggctccagttccccgtcggccgtatcg 7800536
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| |||||||||||||||||||| |||| Sbjct: 14884 caaggccgggctccagttccccgtcggccgtatcg 14918
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| |||||||||||||||||||| |||| Sbjct: 113000 caaggccgggctccagttccccgtcggccgtatcg 113034
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| || ||||||||||||||||| |||| | |||||||||| ||| ||| Sbjct: 161 caaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaagggccggta 220 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| |||||||| || | |||||||||| Sbjct: 221 cgcgcagcgcgtgggcactggcgcccccg 249
>gb|BC093343.1| Danio rerio MID1 interacting protein 1, mRNA (cDNA clone MGC:112497 IMAGE:7411962), complete cds Length = 1726 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 164 tcgcggtcttccaaggccggcctccagttccccgtcggccg 204 |||||||| |||| ||| || |||||||||||||||||||| Sbjct: 87 tcgcggtcatccagggctggactccagttccccgtcggccg 127
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcgccaggtacctcaagatcggcaagta 234 ||||||||| || ||||||||||||||||| |||| | |||||||||| ||| ||| Sbjct: 310 caaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaagggccggta 369 Query: 235 cgcccagcgcgtcggtgccggcgcccccg 263 ||| |||||||| || | |||||||||| Sbjct: 370 cgcgcagcgcgtgggcactggcgcccccg 398
>ref|XM_569065.1| Cryptococcus neoformans var. neoformans JEC21 histone H2A-1 (CNB00550) partial mRNA Length = 544 Score = 48.1 bits (24), Expect = 0.014 Identities = 30/32 (93%) Strand = Plus / Plus Query: 170 tcttccaaggccggcctccagttccccgtcgg 201 |||||||||||||| || |||||||||||||| Sbjct: 115 tcttccaaggccggtcttcagttccccgtcgg 146
>ref|XM_848163.1| PREDICTED: Canis familiaris similar to Histone H2A.x (H2a/x) (LOC489372), mRNA Length = 841 Score = 46.1 bits (23), Expect = 0.055 Identities = 26/27 (96%) Strand = Plus / Plus Query: 179 gccggcctccagttccccgtcggccgc 205 |||||||||||||||||||| |||||| Sbjct: 361 gccggcctccagttccccgtgggccgc 387
>emb|CR700361.2|CNS0G3CL Tetraodon nigroviridis full-length cDNA Length = 547 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 227 ggcaagtacgcccagcgcgtcggtgccggcgcccc 261 ||||| ||||||||||| ||||| ||||||||||| Sbjct: 141 ggcaactacgcccagcgtgtcggcgccggcgcccc 175
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 46.1 bits (23), Expect = 0.055 Identities = 26/27 (96%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccg 204 |||||| |||||||||||||||||||| Sbjct: 102 ggccgggctccagttccccgtcggccg 128
>gb|AF517875.1| Griffithsia japonica isolate Gj43 histone H2A protein mRNA, complete cds Length = 531 Score = 46.1 bits (23), Expect = 0.055 Identities = 29/31 (93%) Strand = Plus / Plus Query: 179 gccggcctccagttccccgtcggccgcatcg 209 ||||| |||||||||||||||||||| |||| Sbjct: 94 gccggtctccagttccccgtcggccgtatcg 124
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.055 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgc 205 ||||||| | ||||||||||||||||||||| Sbjct: 7508130 caaggccaggctccagttccccgtcggccgc 7508160
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 46.1 bits (23), Expect = 0.055 Identities = 32/35 (91%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgcatcg 209 ||||||||| ||||| |||||||||||||| |||| Sbjct: 36467 caaggccgggctccaattccccgtcggccgtatcg 36501
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 46.1 bits (23), Expect = 0.055 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccgc 205 ||||||| | ||||||||||||||||||||| Sbjct: 30603 caaggccaggctccagttccccgtcggccgc 30633
>ref|XM_476061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cgactccggccatctctccggc 67 |||||||||||||||||||||| Sbjct: 1072 cgactccggccatctctccggc 1051
>gb|AY389710.1| Hyacinthus orientalis histone H2A mRNA, partial cds Length = 677 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccg 204 ||||||||| || ||||||||||||||||| Sbjct: 151 caaggccgggctacagttccccgtcggccg 180
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 caaggccggcctccagttccccgtcggccg 204 ||||||||| |||||||||||||| ||||| Sbjct: 114 caaggccgggctccagttccccgttggccg 143
>gb|AC145966.2| Pan troglodytes BAC clone RP43-17M9 from 7, complete sequence Length = 197140 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 cattcatctctcagcaatctgt 44 |||||||||||||||||||||| Sbjct: 72011 cattcatctctcagcaatctgt 72032
>gb|AC073341.10| Homo sapiens BAC clone RP11-549I23 from 7, complete sequence Length = 185574 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 cattcatctctcagcaatctgt 44 |||||||||||||||||||||| Sbjct: 9567 cattcatctctcagcaatctgt 9546
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 cgactccggccatctctccggc 67 |||||||||||||||||||||| Sbjct: 46083 cgactccggccatctctccggc 46104
>dbj|AK100028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147B02, full insert sequence Length = 1897 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 cgactccggccatctctccggc 67 |||||||||||||||||||||| Sbjct: 1159 cgactccggccatctctccggc 1138
>ref|XM_954349.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Plus Query: 227 ggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||||||||| || ||||||||||| |||| Sbjct: 118 ggcaactacgcccagcgtgttggtgccggcgctcccg 154
>ref|XM_331212.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Plus Query: 227 ggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||||||||| || ||||||||||| |||| Sbjct: 118 ggcaactacgcccagcgtgttggtgccggcgctcccg 154
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ctccagttccccgtcggccgcatcg 209 |||||||||||||| |||||||||| Sbjct: 6938 ctccagttccccgttggccgcatcg 6962
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgcccagcgcgtcggtgccggcgcc 259 |||||||||| |||||||||||||| Sbjct: 94943 cgcccagcgcctcggtgccggcgcc 94967
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgcccagcgcgtcggtgccggcgcc 259 |||||||||| |||||||||||||| Sbjct: 142788 cgcccagcgcctcggtgccggcgcc 142764
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cgcccagcgcgtcggtgccggcgcc 259 |||||||||| |||||||||||||| Sbjct: 114033 cgcccagcgcctcggtgccggcgcc 114009
>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence Length = 116158 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctccagttccccgtcggccgcatcg 209 |||||||||||||| |||||||||| Sbjct: 42115 ctccagttccccgttggccgcatcg 42091
>gb|AY062171.1| Neurospora crassa histone H2A (hh2A) and histone H2B (hh2B) genes, complete cds Length = 6309 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Minus Query: 227 ggcaagtacgcccagcgcgtcggtgccggcgcccccg 263 ||||| ||||||||||| || ||||||||||| |||| Sbjct: 854 ggcaactacgcccagcgtgttggtgccggcgctcccg 818
>gb|AY576482.1| Litopenaeus vannamei tissue-type hemocyte histone H2A mRNA, partial cds Length = 262 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 ||||||||| |||||||||||||| Sbjct: 60 ggccggccttcagttccccgtcgg 83
>ref|NM_178185.1| Mus musculus histone 1, H2ao (Hist1h2ao), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 101405 ggccggcctgcagttccccgtgggccgc 101378 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 60845 ggccggcctgcagttccccgtgggccgc 60818
>ref|NG_002734.1| Mus musculus histone 1, H2aj (Hist1h2aj) pseudogene on chromosome 13 Length = 1357 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 545 ggccggcctgcagttccccgtgggccgc 572
>ref|XM_978341.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 2 (LOC665433), mRNA Length = 465 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 95 ggccggcctgcagttccccgtgggccgc 122
>ref|XM_978296.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 1 (LOC665433), mRNA Length = 467 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 97 ggccggcctgcagttccccgtgggccgc 124
>ref|XM_752558.1| Ustilago maydis 521 histone H2A (UM01504.1) partial mRNA Length = 411 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 ccaaggccggcctccagttccccgtcgg 201 ||||||| || ||||||||||||||||| Sbjct: 68 ccaaggctggtctccagttccccgtcgg 95
>ref|XM_754980.1| Ustilago maydis 521 hypothetical protein (UM03926.1) partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gaccagaagatgggttctgc 120 |||||||||||||||||||| Sbjct: 885 gaccagaagatgggttctgc 904
>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence Length = 220013 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctactggatctccacattc 27 |||||||||||||||||||| Sbjct: 131637 cctactggatctccacattc 131618
>gb|AC129082.6| Mus musculus BAC clone RP24-324M11 from chromosome 8, complete sequence Length = 141671 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gggaggggcaaggccaaggc 147 |||||||||||||||||||| Sbjct: 115317 gggaggggcaaggccaaggc 115298
>emb|CR722682.2|CNS0GKKG Tetraodon nigroviridis full-length cDNA Length = 824 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 |||||||||||||||||| ||||| Sbjct: 91 ggccggcctccagttccctgtcgg 114
>emb|CR705936.2|CNS0G7NG Tetraodon nigroviridis full-length cDNA Length = 786 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 |||||||||||||||||| ||||| Sbjct: 90 ggccggcctccagttccctgtcgg 113
>emb|CR681249.2|CNS0FOLP Tetraodon nigroviridis full-length cDNA Length = 821 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 |||||||||||||||||| ||||| Sbjct: 89 ggccggcctccagttccctgtcgg 112
>emb|CR673736.2|CNS0FITQ Tetraodon nigroviridis full-length cDNA Length = 767 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 |||||||||||||||||| ||||| Sbjct: 50 ggccggcctccagttccctgtcgg 73
>emb|CR659269.2|CNS0F7NV Tetraodon nigroviridis full-length cDNA Length = 805 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcgg 201 |||||||||||||||||| ||||| Sbjct: 90 ggccggcctccagttccctgtcgg 113
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tctgccggcggcgggagggg 135 |||||||||||||||||||| Sbjct: 2438477 tctgccggcggcgggagggg 2438496
>emb|X59961.1|RNH2AB R.norvegicus genes for H2A and H2B histones Length = 1635 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 945 ggccggcctgcagttccccgtgggccgc 972
>emb|X05863.1|MMHIS2BB Mouse H2B and H2A-pseudo histone genes (291B) Length = 1826 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 1011 ggccggcctgcagttccccgtgggccgc 1038
>emb|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) Length = 1797 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 1012 ggccggcctgcagttccccgtgggccgc 1039
>gb|BC099406.1| Mus musculus histone 1, H2ac, mRNA (cDNA clone MGC:117571 IMAGE:30789778), complete cds Length = 1075 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 73 ggccggcctgcagttccccgtgggccgc 100
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 164270 ggccggcctgcagttccccgtgggccgc 164243 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 55139 ggccggcctgcagttccccgtgggccgc 55166 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 14575 ggccggcctgcagttccccgtgggccgc 14602
>ref|NM_178189.2| Mus musculus histone 1, H2ac (Hist1h2ac), mRNA Length = 2493 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 107 ggccggcctgcagttccccgtgggccgc 134
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 33580 ggccggcctgcagttccccgtgggccgc 33553 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 10696 ggccggcctgcagttccccgtgggccgc 10723
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 60221 ggccggcctgcagttccccgtgggccgc 60194 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 52846 ggccggcctgcagttccccgtgggccgc 52819
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 208146 ggccggcctgcagttccccgtgggccgc 208119 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 174755 ggccggcctgcagttccccgtgggccgc 174728 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 142747 ggccggcctgcagttccccgtgggccgc 142720 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 137474 ggccggcctgcagttccccgtgggccgc 137501
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 137183 ggccggcctgcagttccccgtaggccgc 137156
>emb|AJ494851.1|ODI494851 Oikopleura dioica partial H2A.2 gene for histone h2A.2 Length = 1947 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ctccagttccccgtcggccg 204 |||||||||||||||||||| Sbjct: 1290 ctccagttccccgtcggccg 1309
>emb|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene Length = 5705 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ctccagttccccgtcggccg 204 |||||||||||||||||||| Sbjct: 3438 ctccagttccccgtcggccg 3419
>gb|BC065803.1| Mus musculus histone 1, H2ag, mRNA (cDNA clone MGC:73771 IMAGE:1263745), complete cds Length = 527 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 85 ggccggcctgcagttccccgtgggccgc 112
>ref|NM_001024282.1| Rattus norvegicus Histone H2a (predicted) (RGD1564767_predicted), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>dbj|AK145443.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0045N09 product:histone 1, H2ad, full insert sequence Length = 446 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 96 ggccggcctgcagttccccgtgggccgc 123
>dbj|AK146117.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730004H15 product:histone 1, H2ai, full insert sequence Length = 1396 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 75 ggccggcctgcagttccccgtgggccgc 102
>dbj|AK146846.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920064A15 product:histone 1, H2ad, full insert sequence Length = 445 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 94 ggccggcctgcagttccccgtgggccgc 121
>ref|NM_175660.2| Mus musculus histone 1, H2ab (Hist1h2ab), mRNA Length = 506 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 108 ggccggcctgcagttccccgtaggccgc 135
>gb|BC090402.1| Mus musculus cDNA clone MGC:103288 IMAGE:5150365, complete cds Length = 447 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 75 ggccggcctgcagttccccgtgggccgc 102
>gb|BC062251.1| Mus musculus cDNA clone MGC:73635 IMAGE:1224905, complete cds Length = 444 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 75 ggccggcctgcagttccccgtgggccgc 102
>gb|BC069947.1| Mus musculus cDNA clone IMAGE:6494016 Length = 2110 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 333 ggccggcctgcagttccccgtgggccgc 360
>gb|BC055904.1| Mus musculus cDNA clone IMAGE:4913108 Length = 2221 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 331 ggccggcctgcagttccccgtgggccgc 358
>ref|NM_178186.2| Mus musculus histone 1, H2ag (Hist1h2ag), mRNA Length = 527 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 85 ggccggcctgcagttccccgtgggccgc 112
>ref|NM_178188.3| Mus musculus histone 1, H2ad (Hist1h2ad), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccagcgcgtcggtgccggcg 257 |||||||||||||||||||| Sbjct: 942941 ccagcgcgtcggtgccggcg 942922
>gb|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds Length = 2822 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 1766 ggccggcctgcagttccccgtgggccgc 1739
>dbj|AK033518.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030420B16 product:histone 1, H2ac, full insert sequence Length = 2493 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 107 ggccggcctgcagttccccgtgggccgc 134
>gb|AC007752.6|AC007752 Drosophila melanogaster, chromosome 3R, region 87C-87D, BAC clone BACR07J06, complete sequence Length = 193248 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tctgccggcggcgggaggggcaag 139 |||||||||||||| ||||||||| Sbjct: 90415 tctgccggcggcggtaggggcaag 90438
>gb|BC092032.1| Xenopus laevis hypothetical protein MGC83508, mRNA (cDNA clone MGC:84952 IMAGE:6323734), complete cds Length = 1415 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 |||||| |||||||||||||| |||||| Sbjct: 119 ggccggactccagttccccgtaggccgc 146
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 226 cggcaagtacgcccagcgcgtcggtgccggcg 257 |||| ||||||||||||||||| |||| |||| Sbjct: 3026125 cggcgagtacgcccagcgcgtccgtgcaggcg 3026156
>ref|NM_178184.1| Mus musculus histone 1, H2an (Hist1h2an), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>ref|NM_178183.1| Mus musculus histone 1, H2ak (Hist1h2ak), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>ref|NM_178182.1| Mus musculus histone 1, H2ai (Hist1h2ai), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>gb|AY158937.1| Mus musculus histone protein Hist1h2bc gene, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 207 ggccggcctgcagttccccgtgggccgc 180
>gb|AY158935.1| Mus musculus histone protein Hist1h2bf gene, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 155 ggccggcctgcagttccccgtgggccgc 128
>gb|AY158931.1| Mus musculus histone protein Hist1h2bk gene, complete cds Length = 1201 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 87 ggccggcctgcagttccccgtgggccgc 60
>gb|AY158930.1| Mus musculus histone protein Hist1h2bp gene, complete cds Length = 1201 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 125 ggccggcctgcagttccccgtgggccgc 98
>gb|AY158929.1| Mus musculus histone protein Hist1h2bn gene, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 140 ggccggcctgcagttccccgtgggccgc 113
>gb|AY158928.1| Mus musculus histone protein Hist1h2bm gene, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 157 ggccggcctgcagttccccgtgggccgc 130
>gb|AY158927.1| Mus musculus histone protein Hist1h2bl gene, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 157 ggccggcctgcagttccccgtgggccgc 130
>gb|AY158920.1| Mus musculus histone protein Hist1h2ab gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 563 ggccggcctgcagttccccgtaggccgc 590
>gb|AY158919.1| Mus musculus histone protein Hist1h2ac gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 563 ggccggcctgcagttccccgtgggccgc 590
>gb|AY158918.1| Mus musculus histone protein Hist1h2ad gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 563 ggccggcctgcagttccccgtgggccgc 590
>gb|AY158916.1| Mus musculus histone protein Hist1h2af gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 587 ggccggcctgcagttccccgtgggccgc 614
>gb|AY158915.1| Mus musculus histone protein Hist1h2ag gene, complete cds Length = 1392 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 562 ggccggcctgcagttccccgtgggccgc 589
>gb|AY158914.1| Mus musculus histone protein Hist1h2ah gene, complete cds Length = 1381 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 560 ggccggcctgcagttccccgtgggccgc 587
>gb|AY158913.1| Mus musculus histone protein Hist1h2ao gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 563 ggccggcctgcagttccccgtgggccgc 590
>gb|AY158912.1| Mus musculus histone protein Hist1h2an gene, complete cds Length = 1390 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 563 ggccggcctgcagttccccgtgggccgc 590
>gb|AY158911.1| Mus musculus histone protein Hist1h2ak gene, complete cds Length = 1201 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 597 ggccggcctgcagttccccgtgggccgc 624
>gb|AY158910.1| Mus musculus histone protein Hist1h2aj pseudogene, partial sequence Length = 1357 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 545 ggccggcctgcagttccccgtgggccgc 572
>gb|AY158909.1| Mus musculus histone protein Hist1h2ai gene, complete cds Length = 1387 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 560 ggccggcctgcagttccccgtgggccgc 587
>gb|AY158907.1| Mus musculus histone protein Hist1h1e gene, complete cds Length = 1381 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 1260 ggccggcctgcagttccccgtgggccgc 1287
>ref|NM_175661.1| Mus musculus histone 1, H2af (Hist1h2af), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>ref|NM_175659.1| Mus musculus histone 1, H2ah (Hist1h2ah), mRNA Length = 387 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccggcctgcagttccccgtgggccgc 90
>gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34 of 118 of the complete sequence Length = 265467 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tctgccggcggcgggaggggcaag 139 |||||||||||||| ||||||||| Sbjct: 218463 tctgccggcggcggtaggggcaag 218486
>gb|U95113.1|RNU95113 Rattus norvegicus histone H2a gene, complete cds Length = 575 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 127 ggccggcctgcagttccccgtgggccgc 154
>gb|U95111.1|MSU95111 Mus spretus histone H2a pseudogene, complete sequence Length = 567 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 126 ggccggcctgcagttccccgtgggccgc 153
>gb|M33988.1|MUSH2AX1 Mouse histone H2A.1 gene, complete cds Length = 929 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 226 ggccggcctgcagttccccgtgggccgc 253
>gb|M37736.1|MUSHIS2AR Mouse replication-dependent histone H2A.1 gene Length = 668 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggccggcctccagttccccgtcggccgc 205 ||||||||| ||||||||||| |||||| Sbjct: 186 ggccggcctgcagttccccgtgggccgc 213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,698,843 Number of Sequences: 3902068 Number of extensions: 1698843 Number of successful extensions: 34882 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34061 Number of HSP's gapped (non-prelim): 806 length of query: 263 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 241 effective length of database: 17,147,199,772 effective search space: 4132475145052 effective search space used: 4132475145052 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
