ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast63d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds Length = 7113 Score = 842 bits (425), Expect = 0.0 Identities = 425/425 (100%) Strand = Plus / Plus Query: 15 cagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatct 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5582 cagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatct 5641 Query: 75 tcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcc 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5642 tcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcc 5701 Query: 135 cggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgcc 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5702 cggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgcc 5761 Query: 195 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacc 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5762 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacc 5821 Query: 255 cggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggcc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5822 cggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggcc 5881 Query: 315 gccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtcaccgagt 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5882 gccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtcaccgagt 5941 Query: 375 acgacgcgcacaacctcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgctga 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5942 acgacgcgcacaacctcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgctga 6001 Query: 435 gggac 439 ||||| Sbjct: 6002 gggac 6006
>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds Length = 2738 Score = 650 bits (328), Expect = 0.0 Identities = 396/416 (95%), Gaps = 2/416 (0%) Strand = Plus / Plus Query: 25 catcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 catcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcg 1210 Query: 85 gaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcat 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 gaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcat 1270 Query: 145 gcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccc 204 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gcacccagccgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccc 1330 Query: 205 cgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgat 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1331 ggtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacccggagcccat 1390 Query: 265 gaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaa 324 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1391 gaacgcgctcgacgacccgccgtaccggatcaacaacgacgggacgggccgccccatcaa 1450 Query: 325 caacaagacggtgccggcctc-cgccgtgcactacggcggcgtcaccgagtacgacgcgc 383 |||||||||||||| | || | ||||||||||||||| || |||||||||||||| | || Sbjct: 1451 caacaagacggtgc-gcccgctcgccgtgcactacgggggggtcaccgagtacgaggagc 1509 Query: 384 acaacctcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgctgagggac 439 ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||| Sbjct: 1510 acaacctgttcggcctcctcgaggcccgcgccacggggcgcggggtgctgagggac 1565
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%) Strand = Plus / Minus Query: 33 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 92 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 27663514 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 27663455 Query: 93 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 152 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 27663454 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 27663395 Query: 153 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 212 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 27663394 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 27663335 Query: 213 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 272 |||||||| |||||||||||||||||||||||||| | ||||| |||| | |||||| Sbjct: 27663334 ggctgtgggtcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcga 27663275 Query: 273 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 332 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 27663274 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 27663215 Query: 333 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctct 392 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 27663214 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacctct 27663155 Query: 393 tcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 ||||| |||||||||| || ||||||||| ||||||||| Sbjct: 27663154 tcggcttcctcgaggcgcgggccacgcacgacgcgctgct 27663115 Score = 394 bits (199), Expect = e-107 Identities = 352/403 (87%) Strand = Plus / Plus Query: 30 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 89 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 27720520 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 27720579 Query: 90 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 149 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 27720580 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 27720639 Query: 150 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 209 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 27720640 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 27720699 Query: 210 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 269 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 27720700 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 27720759 Query: 270 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 329 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 27720760 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 27720819 Query: 330 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacc 389 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 27720820 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacc 27720879 Query: 390 tcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 |||||||| |||||||||| || ||||||||| ||||||||| Sbjct: 27720880 tcttcggcttcctcgaggcgcgggccacgcacgacgcgctgct 27720922
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%) Strand = Plus / Minus Query: 33 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 92 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 12769 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 12710 Query: 93 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 152 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 12709 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 12650 Query: 153 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 212 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 12649 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 12590 Query: 213 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 272 |||||||| |||||||||||||||||||||||||| | ||||| |||| | |||||| Sbjct: 12589 ggctgtgggtcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcga 12530 Query: 273 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 332 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 12529 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 12470 Query: 333 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctct 392 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12469 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacctct 12410 Query: 393 tcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 ||||| |||||||||| || ||||||||| ||||||||| Sbjct: 12409 tcggcttcctcgaggcgcgggccacgcacgacgcgctgct 12370 Score = 394 bits (199), Expect = e-107 Identities = 352/403 (87%) Strand = Plus / Plus Query: 30 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 89 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 69775 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 69834 Query: 90 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 149 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 69835 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 69894 Query: 150 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 209 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 69895 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 69954 Query: 210 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 269 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 69955 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 70014 Query: 270 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 329 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 70015 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 70074 Query: 330 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacc 389 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 70075 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacc 70134 Query: 390 tcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 |||||||| |||||||||| || ||||||||| ||||||||| Sbjct: 70135 tcttcggcttcctcgaggcgcgggccacgcacgacgcgctgct 70177
>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full insert sequence Length = 2829 Score = 412 bits (208), Expect = e-112 Identities = 352/400 (88%) Strand = Plus / Plus Query: 33 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 92 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 1217 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 1276 Query: 93 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 152 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 1277 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 1336 Query: 153 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 212 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 1337 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 1396 Query: 213 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 272 |||||||| ||||||||| |||||||||||||||| | ||||| |||| | |||||| Sbjct: 1397 ggctgtgggtcgacatgagcgagatctccaacttcgtcgacccgccgccgctcaacgcga 1456 Query: 273 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 332 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 1457 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 1516 Query: 333 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctct 392 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1517 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacctct 1576 Query: 393 tcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 ||||| |||||||||| || ||||||||| ||||||||| Sbjct: 1577 tcggcttcctcgaggcgcgggccacgcacgacgcgctgct 1616
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 394 bits (199), Expect = e-107 Identities = 352/403 (87%) Strand = Plus / Plus Query: 30 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 89 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 23029 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 23088 Query: 90 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 149 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 23089 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 23148 Query: 150 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 209 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 23149 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 23208 Query: 210 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 269 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 23209 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 23268 Query: 270 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 329 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 23269 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 23328 Query: 330 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacc 389 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23329 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacc 23388 Query: 390 tcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 |||||||| |||||||||| || ||||||||| ||||||||| Sbjct: 23389 tcttcggcttcctcgaggcgcgggccacgcacgacgcgctgct 23431
>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full insert sequence Length = 2804 Score = 394 bits (199), Expect = e-107 Identities = 352/403 (87%) Strand = Plus / Plus Query: 30 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 89 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 1192 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 1251 Query: 90 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 149 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 1252 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 1311 Query: 150 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 209 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 1312 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 1371 Query: 210 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 269 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 1372 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 1431 Query: 270 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 329 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 1432 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 1491 Query: 330 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacc 389 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1492 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacc 1551 Query: 390 tcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 |||||||| |||||||||| || ||||||||| ||||||||| Sbjct: 1552 tcttcggcttcctcgaggcgcgggccacgcacgacgcgctgct 1594
>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full insert sequence Length = 2873 Score = 394 bits (199), Expect = e-107 Identities = 352/403 (87%) Strand = Plus / Plus Query: 30 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 89 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 1260 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 1319 Query: 90 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 149 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 1320 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 1379 Query: 150 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 209 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 1380 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 1439 Query: 210 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 269 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 1440 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 1499 Query: 270 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 329 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 1500 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 1559 Query: 330 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacc 389 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1560 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacc 1619 Query: 390 tcttcggcctcctcgaggcccgcgccacgcaccgcgcgctgct 432 |||||||| |||||||||| || ||||||||| ||||||||| Sbjct: 1620 tcttcggcttcctcgaggcgcgggccacgcacgacgcgctgct 1662
>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence Length = 1946 Score = 381 bits (192), Expect = e-102 Identities = 366/424 (86%) Strand = Plus / Minus Query: 9 tagacccagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcagg 68 |||||||||||||| || | ||| ||| |||||||||| ||| || ||||||||||||| Sbjct: 1649 tagacccagggatcagcgtgaacgagacatacgggacgtacgtgcgagggatgcagcagg 1590 Query: 69 acatcttcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtct 128 || | |||||||||||||||||||| |||| | ||||||| |||||||| || |||||| Sbjct: 1589 acgtgttcctgaagcggaacggcaccaactacctcggcaaggtgtggcccgggtacgtct 1530 Query: 129 acttcccggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctct 188 |||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| | Sbjct: 1529 acttcccggacttcctcaacccgcgcgccgccgagttctgggcgcgcgagatcgccctgt 1470 Query: 189 tccgccggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttct 248 |||| ||||| ||||||||||||| || |||||||||||||||||| ||||||||||| Sbjct: 1469 tccggcggacgctccccgtcgacggcctctggatcgacatgaacgaggtctccaacttcg 1410 Query: 249 acaacccggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggca 308 | |||||| ||| | |||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1409 tcgacccggcgcccctcaacgcgctggacgacccgccgtaccgcatcaacaactccggcg 1350 Query: 309 cgggccgccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtca 368 | |||||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 1349 tgcgccgccccatcaacaacaagaccacgccggcgtccgcggtgcactacggcggcgtgc 1290 Query: 369 ccgagtacgacgcgcacaacctcttcggcctcctcgaggcccgcgccacgcaccgcgcgc 428 ||| ||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||| Sbjct: 1289 gcgactacgacgcgcacaacctctacggcttcctggaggcgcgcgccacgcacggcgcgc 1230 Query: 429 tgct 432 |||| Sbjct: 1229 tgct 1226
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 195 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 247 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 195 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 247 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 195 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 247 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|AF448201.1| Pinus pinaster putative alpha-xylosidase (XYL1) mRNA, complete cds Length = 2881 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 201 tccccgtcgacgggctgtggatcgacatgaacgagatctccaacttct 248 ||||||| ||||| || |||||||||||||||||||||||||| |||| Sbjct: 1292 tccccgtggacggtctctggatcgacatgaacgagatctccaatttct 1339
>gb|DQ490470.1| Emericella nidulans alpha-glucosidase (AN0941-2) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 209 gacgggctgtggatcgacatgaacgag 235 ||||| ||||||||||||||||||||| Sbjct: 1246 gacggcctgtggatcgacatgaacgag 1272
>ref|XM_653453.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0941.2), mRNA Length = 2520 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 209 gacgggctgtggatcgacatgaacgag 235 ||||| ||||||||||||||||||||| Sbjct: 1174 gacggcctgtggatcgacatgaacgag 1200
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 209 gacgggctgtggatcgacatgaacgag 235 ||||| ||||||||||||||||||||| Sbjct: 2879452 gacggcctgtggatcgacatgaacgag 2879478
>ref|XM_747898.1| Aspergillus fumigatus Af293 alpha-glucosidase B (Afu1g16250) partial mRNA Length = 2646 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 207 tcgacgggctgtggatcgacatgaacgagatctccaacttct 248 ||||||| ||||||||||| ||||||||| | ||||||||| Sbjct: 1247 tcgacggtctgtggatcgatatgaacgaggccgccaacttct 1288
>gb|AY373973.1| Helicoverpa armigera cathepsin L-like protease mRNA, complete cds Length = 1540 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 ggtgccggcctccgccgtgcac 355 |||||||||||||||||||||| Sbjct: 1185 ggtgccggcctccgccgtgcac 1206
>dbj|AB243675.1| Magnetospirillum sp. TS-6 bcl gene for benzoate-CoA ligase, complete cds Length = 1587 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 336 tgccggcctccgccgtgcactacggc 361 |||||||| ||||||||||||||||| Sbjct: 602 tgccggccaccgccgtgcactacggc 627
>ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tcaacaacgacggcacgggcc 314 ||||||||||||||||||||| Sbjct: 2182555 tcaacaacgacggcacgggcc 2182575
>gb|DQ490507.1| Emericella nidulans alpha/beta-glucosidase (AN7345-2) mRNA, complete cds Length = 2685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 ctgtggatcgacatgaacgag 235 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tcaacaacgacggcacgggcc 314 ||||||||||||||||||||| Sbjct: 3357351 tcaacaacgacggcacgggcc 3357371
>ref|XM_675522.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7345.2), mRNA Length = 2628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 ctgtggatcgacatgaacgag 235 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 329 aagacggtgccggcctccgccgtgc 353 |||||| |||||||||||||||||| Sbjct: 4977259 aagacgctgccggcctccgccgtgc 4977235
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 cttcggcctcctcgaggcccgcgcc 415 |||||||||||||||||||| |||| Sbjct: 3428882 cttcggcctcctcgaggccctcgcc 3428906
>emb|AL162851.10| Human DNA sequence from clone RP11-186M12 on chromosome 22, complete sequence Length = 172545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 68524 tgcagcaggacatcttcctga 68544
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tcaacaacgacggcacgggcc 314 ||||||||||||||||||||| Sbjct: 3088637 tcaacaacgacggcacgggcc 3088657
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 218 tggatcgacatgaacgagatctccaacttctacaacc 254 |||||||||||||||||| | | ||||||||||||| Sbjct: 1258942 tggatcgacatgaacgagcccgcaaacttctacaacc 1258906
>ref|XM_930982.1| PREDICTED: Homo sapiens hypothetical protein LOC642653 (LOC642653), mRNA Length = 609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 131 tgcagcaggacatcttcctga 111
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1700077 gtgtggcccggccccgtctacttcccggacttc 1700109
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 42420 gtgtggcccggccccgtctacttcccggacttc 42452
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 aacccggagccgatgaacgcg 271 ||||||||||||||||||||| Sbjct: 1409412 aacccggagccgatgaacgcg 1409392
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 137308 gtgtggcccggccccgtctacttcccggacttc 137340
>emb|BX072566.10| Human DNA sequence from clone RP11-25L22 on chromosome 22, complete sequence Length = 164239 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 25358 tgcagcaggacatcttcctga 25338
>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full insert sequence Length = 1990 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full insert sequence Length = 3486 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1473 gtgtggcccggccccgtctacttcccggacttc 1505
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 Length = 340000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 82749 tgcagcaggacatcttcctga 82769
>emb|AL050303.4|HS214G14 Homo sapiens chromosome 21 PAC RPCIP704G14214Q2, complete sequence Length = 166239 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 78163 tgcagcaggacatcttcctga 78183
>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full insert sequence Length = 3193 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 110 gtgtggccgggcgacgtctacttcccggacttc 142 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-72P4, complete sequence Length = 184770 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tgcagcaggacatcttcctga 80 ||||||||||||||||||||| Sbjct: 23965 tgcagcaggacatcttcctga 23945
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgagatctccaacttctaca 251 |||||||||||||||||||| Sbjct: 3789762 cgagatctccaacttctaca 3789743
>gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequence Length = 40511 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 cggcctcctcgaggcccgcg 413 |||||||||||||||||||| Sbjct: 5735 cggcctcctcgaggcccgcg 5716
>gb|DQ397827.1| Cenarchaeum symbiosum clone C01A01, complete sequence Length = 37585 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 cggcctcctcgaggcccgcg 413 |||||||||||||||||||| Sbjct: 5593 cggcctcctcgaggcccgcg 5612
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgccacgcaccgcgcgctgc 431 |||||||||||||||||||| Sbjct: 2935429 cgccacgcaccgcgcgctgc 2935410
>gb|AE012343.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 251 of 460 of the complete genome Length = 12314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgccacgcaccgcgcgctgc 431 |||||||||||||||||||| Sbjct: 8153 cgccacgcaccgcgcgctgc 8134
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgccacgcaccgcgcgctgc 431 |||||||||||||||||||| Sbjct: 2142880 cgccacgcaccgcgcgctgc 2142899
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgcgccacgcaccgcgcgc 428 |||||||||||||||||||| Sbjct: 20282289 ccgcgccacgcaccgcgcgc 20282270
>gb|AF109386.2|AF109386 Streptomyces sp. 2065 protocatechuaic acid catabolic gene cluster, complete sequence Length = 6551 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 398 ctcctcgaggcccgcgccacgcaccgcg 425 |||| |||||||||||||| |||||||| Sbjct: 6066 ctccacgaggcccgcgccaggcaccgcg 6039
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccgcgccacgcaccgcgcgc 428 |||||||||||||||||||| Sbjct: 61416 ccgcgccacgcaccgcgcgc 61397
>dbj|AK068184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133H08, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 acggcggcgtcaccgagtacgacg 380 ||||||||||||||| |||||||| Sbjct: 178 acggcggcgtcaccgcgtacgacg 201
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgagatctccaacttctaca 251 |||||||||||||||||||| Sbjct: 1784207 cgagatctccaacttctaca 1784226
>gb|AY779909.1| Drosophila melanogaster strain NVIII-9 enhancer of split complex, complete sequence Length = 47165 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ggctgtggatcgacatgaacgaga 236 ||||||||||||||||||| |||| Sbjct: 8090 ggctgtggatcgacatgaaagaga 8113
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgccacgcaccgcgcgctgc 431 |||||||||||||||||||| Sbjct: 2957178 cgccacgcaccgcgcgctgc 2957159
>dbj|AB057452.1| Physcomitrella patens subsp. patens PpGLU mRNA for alpha-glucosidase, complete cds Length = 3171 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gagtacgacgcgcacaacct 390 |||||||||||||||||||| Sbjct: 1832 gagtacgacgcgcacaacct 1851 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,214,920 Number of Sequences: 3902068 Number of extensions: 2214920 Number of successful extensions: 44331 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43074 Number of HSP's gapped (non-prelim): 1254 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
