Clone Information

BLAST Search Result

Clone Name	bast63d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IAA3_ORYSA (Q5NB25) Auxin-responsive protein IAA3 (Indoleacetic ...	124	1e-28
2	IAA17_ORYSA (Q75GB1) Auxin-responsive protein IAA17 (Indoleaceti...	117	1e-26
3	IAA21_ORYSA (Q5Z749) Auxin-responsive protein IAA21 (Indoleaceti...	75	1e-13
4	IAA5_ORYSA (Q59AF3) Auxin-responsive protein IAA5 (Indoleacetic ...	61	1e-09
5	IAA19_ORYSA (Q6AT33) Auxin-responsive protein IAA19 (Indoleaceti...	55	9e-08
6	IAA27_ARATH (Q9ZSY8) Auxin-responsive protein IAA27 (Indoleaceti...	48	1e-05
7	IAA12_ORYSA (Q75GK1) Auxin-responsive protein IAA12 (Indoleaceti...	46	4e-05
8	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	44	3e-04
9	IAA24_ORYSA (Q6ZL57) Auxin-responsive protein IAA24 (Indoleaceti...	42	7e-04
10	IAA8_ARATH (Q38826) Auxin-responsive protein IAA8 (Indoleacetic ...	41	0.001
11	IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleaceti...	40	0.002
12	IAA31_ORYSA (P0C133) Auxin-responsive protein IAA31 (Indoleaceti...	40	0.003
13	IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleaceti...	40	0.004
14	IAA14_ARATH (Q38832) Auxin-responsive protein IAA14 (Indoleaceti...	40	0.004
15	IAA4_PEA (P49679) Auxin-induced protein IAA4	39	0.006
16	CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)	39	0.006
17	IAA9_ARATH (Q38827) Auxin-responsive protein IAA9 (Indoleacetic ...	39	0.006
18	IAA7_ARATH (Q38825) Auxin-responsive protein IAA7 (Indoleacetic ...	38	0.011
19	AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic ...	37	0.024
20	IAA30_ORYSA (P0C132) Auxin-responsive protein IAA30 (Indoleaceti...	37	0.031
21	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	35	0.070
22	IAA11_ORYSA (Q75GK0) Auxin-responsive protein IAA11 (Indoleaceti...	35	0.092
23	AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic ...	35	0.12
24	IAA4_ARATH (P33077) Auxin-responsive protein IAA4 (Indoleacetic ...	35	0.12
25	IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleaceti...	33	0.35
26	IAA16_ARATH (O24407) Auxin-responsive protein IAA16 (Indoleaceti...	33	0.45
27	AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic ...	33	0.45
28	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	32	0.59
29	AUX28_SOYBN (P13089) Auxin-induced protein AUX28	32	0.59
30	NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p...	32	0.78
31	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	32	0.78
32	CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor	32	0.78
33	TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibril...	32	1.0
34	TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibr...	32	1.0
35	TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repe...	32	1.0
36	MSX2_CHICK (P28362) Homeobox protein MSX-2 (CHOX-8) (GHox-8)	31	1.3
37	MOT3_HUMAN (O95907) Monocarboxylate transporter 3 (MCT 3)	31	1.7
38	IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic ...	31	1.7
39	NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4...	30	2.3
40	IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleaceti...	30	2.3
41	CCHL_NEUCR (P14187) Cytochrome c heme lyase (EC 4.4.1.17) (CCHL)...	30	2.3
42	AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic ...	30	2.9
43	RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-ass...	30	3.8
44	CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor	30	3.8
45	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	30	3.8
46	NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4...	30	3.8
47	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.8
48	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	30	3.8
49	XYND_CELFI (P54865) Endo-1,4-beta-xylanase D precursor (EC 3.2.1...	30	3.8
50	AUX22_SOYBN (P13088) Auxin-induced protein AUX22	30	3.8
51	IAA6_PEA (P49680) Auxin-induced protein IAA6	30	3.8
52	NIFB_KLEPN (P10390) FeMo cofactor biosynthesis protein nifB	30	3.8
53	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	29	5.0
54	RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (N...	29	5.0
55	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	29	5.0
56	NTF2_CLAHE (Q8NJ52) Nuclear transport factor 2 (NTF-2) (Allergen...	29	5.0
57	HSP1_ISOMA (P42136) Sperm protamine P1	29	5.0
58	EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400...	29	6.6
59	BCCP_PROFR (P02904) Methylmalonyl-CoA carboxyltransferase 1.3S s...	29	6.6
60	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	29	6.6
61	KHSE_HALSA (Q9HP55) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)	29	6.6
62	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	29	6.6
63	TWST1_GORGO (Q8MI06) Twist-related protein 1	28	8.6
64	YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific...	28	8.6
65	PCSK9_MOUSE (Q80W65) Proprotein convertase subtilisin/kexin type...	28	8.6
66	CABL1_HUMAN (Q8TDN4) CDK5 and ABL1 enzyme substrate 1 (Interacto...	28	8.6
67	PUR9_PSESM (Q87VR9) Bifunctional purine biosynthesis protein pur...	28	8.6
68	CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor	28	8.6
69	TNR4_HUMAN (P43489) Tumor necrosis factor receptor superfamily m...	28	8.6

>IAA3_ORYSA (Q5NB25) Auxin-responsive protein IAA3 (Indoleacetic acid-induced|
           protein 3)
          Length = 263

 Score =  124 bits (311), Expect = 1e-28
 Identities = 75/135 (55%), Positives = 80/135 (59%), Gaps = 22/135 (16%)
 Frame = +1

Query: 103 MSPPLQLDYIGLS---------AAAGGRADD-DLKGTELRLGLPGCESPDRRP------V 234
           MSPPL+LDYIGLS         +AA  RADD DLKGTELRLGLPG ESPDRRP       
Sbjct: 1   MSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPAAIAAAA 60

Query: 235 AATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGK------ETSGDEKDXXXXXXXXXXX 396
           A  TTLELLPAKGAKR F DE     P+AA GKGK      E   +E+D           
Sbjct: 61  ATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAEEEDKKVAAPPQPAA 120

Query: 397 XXXXXGWPPIRSYRK 441
                GWPPIRSYRK
Sbjct: 121 KAQVVGWPPIRSYRK 135

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>IAA17_ORYSA (Q75GB1) Auxin-responsive protein IAA17 (Indoleacetic acid-induced|
           protein 17)
          Length = 257

 Score =  117 bits (294), Expect = 1e-26
 Identities = 73/130 (56%), Positives = 80/130 (61%), Gaps = 17/130 (13%)
 Frame = +1

Query: 103 MSPPLQLDYIGLS----AAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLP-A 267
           MSPPL+LDYIGLS    AAA   AD+DLKGTELRLGLPG  SPDR P AA  TL+LLP A
Sbjct: 1   MSPPLELDYIGLSPPVPAAADAAADNDLKGTELRLGLPGSHSPDRSPPAA--TLDLLPAA 58

Query: 268 KGAKRGFSDEVLP----PAPSAAGGKGKETSGDEKD--------XXXXXXXXXXXXXXXX 411
           KGAKRGFSDE  P     A +AA GKGK+ +  E+D                        
Sbjct: 59  KGAKRGFSDEARPLPASAAAAAAAGKGKKAAAGEEDEDAEEEDKKVAAAPQAPAAKAQVV 118

Query: 412 GWPPIRSYRK 441
           GWPPIRSYRK
Sbjct: 119 GWPPIRSYRK 128

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>IAA21_ORYSA (Q5Z749) Auxin-responsive protein IAA21 (Indoleacetic acid-induced|
           protein 21)
          Length = 266

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
 Frame = +1

Query: 103 MSPPLQLDYIGLSAAAGGRADDDLKGTELRLGLPGCESPDRRPV-------AATTTLELL 261
           M+PP + DYIGLS AA          TELRLGLPG                AA  TLELL
Sbjct: 1   MAPPQERDYIGLSPAAAAAL-----ATELRLGLPGTAEEAESEGGGGGGTDAAPLTLELL 55

Query: 262 PAKGAKRGFSDEVL-PPA---PSAAGGKGKETSGD-EKDXXXXXXXXXXXXXXXXGWPPI 426
           P  GAKRGF+D ++  PA     AAGGK    + + E++                GWPPI
Sbjct: 56  PKGGAKRGFADAIVGGPAGQRREAAGGKAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPI 115

Query: 427 RSYRK 441
           RSYRK
Sbjct: 116 RSYRK 120

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>IAA5_ORYSA (Q59AF3) Auxin-responsive protein IAA5 (Indoleacetic acid-induced|
           protein 5)
          Length = 271

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 49/132 (37%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
 Frame = +1

Query: 103 MSPPLQL-DYIGLSAAAGGRADD------------DLKGTEL--RLGLPGCESPDRRPVA 237
           MSPPL+  DYIGLSAAA                  + +G  L  RLGLPG ESP+R  VA
Sbjct: 1   MSPPLEPHDYIGLSAAAASPTPSSSSCSSSPNPGGEARGPRLTLRLGLPGSESPEREVVA 60

Query: 238 ATTTLELLP----AKGAKRGFSDEVLPPAPSAAGGKGKETSGDEKDXXXXXXXXXXXXXX 405
           A  TL  LP       +KR F D    P   A+ G     +  + D              
Sbjct: 61  AGLTLGPLPPTTTKAASKRAFPDS--SPRHGASSGSVAAAAACQ-DKAAPAAAPPAAKAQ 117

Query: 406 XXGWPPIRSYRK 441
             GWPP+R+YRK
Sbjct: 118 VVGWPPVRNYRK 129

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>IAA19_ORYSA (Q6AT33) Auxin-responsive protein IAA19 (Indoleacetic acid-induced|
           protein 19)
          Length = 281

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 47/143 (32%), Positives = 58/143 (40%), Gaps = 30/143 (20%)
 Frame = +1

Query: 103 MSPPLQL-DYIGLSAAAGGRADDDLKGTE----------LRLGLPGCESPDR---RPVAA 240
           M PPL+  DYIGL+A+    +      T           LRLGLPG ESP R     V  
Sbjct: 1   MPPPLEARDYIGLAASPASSSSSCCASTPVAEVVGAHLALRLGLPGSESPARAEAEAVVV 60

Query: 241 TTTLELLPAK----GAKRGFSDEVLPPAPSAAGGKGKETSGDEKDXX------------X 372
              L L PA     GAKRGF D +      + G +   T+GD++                
Sbjct: 61  DAALTLGPAPPPRGGAKRGFVDSL----DRSEGRRAAATAGDDERGVREEEEEEKGLGEA 116

Query: 373 XXXXXXXXXXXXXGWPPIRSYRK 441
                        GWPP+RSYRK
Sbjct: 117 AAGAPRAAKAQVVGWPPVRSYRK 139

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>IAA27_ARATH (Q9ZSY8) Auxin-responsive protein IAA27 (Indoleacetic acid-induced|
           protein 27) (Auxin-induced protein 27)
           (Phytochrome-associated protein 2)
          Length = 305

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 42/119 (35%), Positives = 50/119 (42%), Gaps = 28/119 (23%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDR---RPVAATTTLELLPAKGAKRGFSDEV--------LPPAP 315
           + K TELRLGLPG ESP+R   R +A   +    P  GAKR FSD +         P + 
Sbjct: 39  NFKATELRLGLPGSESPERVDSRFLALNKS--SCPVSGAKRVFSDAINDSNKWVFSPGST 96

Query: 316 SAAG----GKGKETS--GDEKDXX-----------XXXXXXXXXXXXXXGWPPIRSYRK 441
           +A G    G G  TS   D K                            GWPPIRS+RK
Sbjct: 97  TATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRK 155

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>IAA12_ORYSA (Q75GK1) Auxin-responsive protein IAA12 (Indoleacetic acid-induced|
           protein 12)
          Length = 226

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
 Frame = +1

Query: 136 LSAAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPA--KGAKRGFSDEVLPP 309
           + AA G  AD  +K TELRLGLPG             T + LP+  +G KR         
Sbjct: 1   MEAAVGYAADSLIKATELRLGLPG-------------TADDLPSTPRGKKR--------- 38

Query: 310 APSAAGGKGKETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRKT 444
           A +A        + D+ +                GWPP+RSYRK+
Sbjct: 39  AAAAEDNNANAAAADDDEHDAVEAAPPVAKAQVVGWPPVRSYRKS 83

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 30/91 (32%), Positives = 38/91 (41%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKETS 348
           +LK TELRLGLPG + P++R  A +        K +    SDE              E+ 
Sbjct: 13  NLKATELRLGLPGSDEPEKRATARSN-------KRSSPEASDE--------------ESI 51

Query: 349 GDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
            +  D                GWPPIRSYRK
Sbjct: 52  SNGSDVTKEDNVVPPAKAQVVGWPPIRSYRK 82

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>IAA24_ORYSA (Q6ZL57) Auxin-responsive protein IAA24 (Indoleacetic acid-induced|
           protein 24)
          Length = 219

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
 Frame = +1

Query: 160 ADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAK----GAKRGFSDEVLPPAPSAAG 327
           A+ D     LRLG PG           TTT    PA     GAKR      L    S A 
Sbjct: 17  AETDADNLCLRLGPPGSSI-----TTTTTTGGADPAAKRSLGAKRS-----LESTDSMAS 66

Query: 328 GKGKETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRKTRWH 453
           G G   +GDE D                GWPP+R+YR+  +H
Sbjct: 67  GTGTSAAGDEHDDDTAAPAKAQVV----GWPPVRAYRRNTFH 104

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>IAA8_ARATH (Q38826) Auxin-responsive protein IAA8 (Indoleacetic acid-induced|
           protein 8)
          Length = 321

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 43/155 (27%), Positives = 55/155 (35%), Gaps = 49/155 (31%)
 Frame = +1

Query: 124 DYIGLSAAAG----------GRADDDLKGTELRLGLPGCESPDR---------RPVAATT 246
           +Y+GLS  +           G+++ + K TELRLGLP  +SP+R         R      
Sbjct: 23  NYLGLSDCSSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKL 82

Query: 247 TLELLPAK--------------GAKRGFSD---EVLPPAPSAAGGKG------------- 336
              LLP+K              G KRGF+D   E      S   G G             
Sbjct: 83  LFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVS 142

Query: 337 KETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           K    +                   GWPPIRSYRK
Sbjct: 143 KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRK 177

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>IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleacetic acid-induced|
           protein 13)
          Length = 236

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
 Frame = +1

Query: 160 ADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEV-----LPPA--PS 318
           AD D+ GTELRLGLPG         A          K AKRGF + +     LP A    
Sbjct: 4   ADVDV-GTELRLGLPGGGGGAAEAAA----------KAAKRGFEETIDLKLKLPTAGMEE 52

Query: 319 AAGGKGKETSGDEKDXXXXXXXXXXXX-----XXXXGWPPIRSYRK 441
           AA GK +  + ++                       GWPP+RS+R+
Sbjct: 53  AAAGKAEAPAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRR 98

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>IAA31_ORYSA (P0C133) Auxin-responsive protein IAA31 (Indoleacetic acid-induced|
           protein 31)
          Length = 197

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 30/93 (32%), Positives = 37/93 (39%)
 Frame = +1

Query: 166 DDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKET 345
           ++LK TELRLGLPG E     P +        P  G+KR  + E     P  A  K    
Sbjct: 2   ENLKATELRLGLPGTEEEAAPPPST-------PRAGSKRALAGE-----PDQAKIKP--- 46

Query: 346 SGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRKT 444
                                 GWPP+RSYRK+
Sbjct: 47  -------------AAAAKAQVVGWPPVRSYRKS 66

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>IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleacetic acid-induced|
           protein 17) (Auxin response 3)
          Length = 229

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
 Frame = +1

Query: 154 GRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEV---LPPAPSAA 324
           G  + +L+ TEL LGLPG ++             + P  G KRGFS+ V   L      A
Sbjct: 3   GSVELNLRETELCLGLPGGDT-------------VAPVTGNKRGFSETVDLKLNLNNEPA 49

Query: 325 GGKGKET------SGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
             +G  T         EK                 GWPP+RSYRK
Sbjct: 50  NKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRK 94

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>IAA14_ARATH (Q38832) Auxin-responsive protein IAA14 (Indoleacetic acid-induced|
           protein 14) (SOLITARY-ROOT protein)
          Length = 228

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAK---GAKRGFSDEV---LPPAPSAAGG 330
           +LK TEL LGLPG           T T+E  PAK   G KRGFS+ V   L    +  G 
Sbjct: 2   NLKETELCLGLPG----------GTETVES-PAKSGVGNKRGFSETVDLKLNLQSNKQGH 50

Query: 331 KGKETSGDEKDXXXXXXXXXX-XXXXXXGWPPIRSYRK 441
               T+G  K+                 GWPP+R+YRK
Sbjct: 51  VDLNTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRK 88

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>IAA4_PEA (P49679) Auxin-induced protein IAA4|
          Length = 189

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 25/95 (26%), Positives = 37/95 (38%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKETS 348
           + K TELRLGLPG    + +        +++      +  +   LP     +    K T+
Sbjct: 2   EFKATELRLGLPGITEEEEK--------KIIHGSSVVKNNNKRQLPQTSEESVSISKVTN 53

Query: 349 GDEKDXXXXXXXXXXXXXXXXGWPPIRSYRKTRWH 453
             ++                 GWPPIRSYRK   H
Sbjct: 54  --DEHIVESSSAAPPAKAKIVGWPPIRSYRKNSLH 86

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>CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)|
          Length = 127

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 22/55 (40%), Positives = 25/55 (45%)
 Frame = -3

Query: 400 PWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAWRPWRAEAPVWWWR 236
           P   AA+  +P     P  S    RRR T +A    PRT  WR  RA A  WW R
Sbjct: 66  PSAGAASACKPLLERLPTPSRRRRRRRATRRARSRMPRTTPWRAPRAPARAWWTR 120

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>IAA9_ARATH (Q38827) Auxin-responsive protein IAA9 (Indoleacetic acid-induced|
           protein 9)
          Length = 338

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 43/161 (26%), Positives = 56/161 (34%), Gaps = 55/161 (34%)
 Frame = +1

Query: 124 DYIGLS-------AAAGGRADDD-----LKGTELRLGLPGCESPDR---------RPVAA 240
           +Y+GLS       +     A+DD     LK TEL LGLPG +SP R           +  
Sbjct: 35  NYLGLSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDE 94

Query: 241 TTTLELLPAK-------------GAKRGFSDE-----------------VLPPAPSAAGG 330
                LLP+K             G KRGFSD                  + P A +    
Sbjct: 95  KPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSV 154

Query: 331 KGKETSGD----EKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
             K+   +    +                  GWPP+RSYRK
Sbjct: 155 TKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRK 195

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>IAA7_ARATH (Q38825) Auxin-responsive protein IAA7 (Indoleacetic acid-induced|
           protein 7) (Auxin resistant 2)
          Length = 243

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKG---- 336
           +LK TEL LGLPG       P  +        A G+KRGFS+ V       +  +G    
Sbjct: 7   NLKATELCLGLPGGAEAVESPAKS--------AVGSKRGFSETVDLMLNLQSNKEGSVDL 58

Query: 337 KETSGDEKDXXXXXXXXXX-XXXXXXGWPPIRSYRK 441
           K  S   K+                 GWPP+R+YRK
Sbjct: 59  KNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRK 94

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>AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic acid-induced|
           protein ARG14)
          Length = 203

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESP-DRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKET 345
           +L+ TELRLGLPG + P ++RP + +        + + +  S E+             ++
Sbjct: 9   NLRATELRLGLPGSDEPQEKRPCSGSVV------RSSNKRSSPEL--EESRCKSNINSDS 60

Query: 346 SGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           S                     GWPPIRS+RK
Sbjct: 61  SDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRK 92

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>IAA30_ORYSA (P0C132) Auxin-responsive protein IAA30 (Indoleacetic acid-induced|
           protein 30)
          Length = 277

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 38/130 (29%), Positives = 46/130 (35%), Gaps = 36/130 (27%)
 Frame = +1

Query: 160 ADDDLKGTELRLGLPGC------------ESPDRRPVAATTTLELL--PAKGAKR----- 282
           AD   + TELRLGLPG              S  +R  A T  L+L   PA  A       
Sbjct: 3   ADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDDDK 62

Query: 283 ----------------GFSDEVLPPAPSAAGG-KGKETSGDEKDXXXXXXXXXXXXXXXX 411
                             +D+  PPA +AAGG K   +                      
Sbjct: 63  EEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVV 122

Query: 412 GWPPIRSYRK 441
           GWPP+RSYRK
Sbjct: 123 GWPPVRSYRK 132

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -3

Query: 436 GSCGLVAIPPPEPWQQAAAVRRPSCPSHPRTSPCL-SRRRQTAQAAGPRPRTLAWRPWRA 260
           GS     +P P P         PS P  P  +P   +  R  A  A PRP  ++ RP   
Sbjct: 757 GSDARAPLPAPAP---------PSTPPGPEPAPAQPAAPRAAAAQARPRPVAVSRRPAEG 807

Query: 259 EAPVWWWRRPGGGPA 215
             P+  WRR   GP+
Sbjct: 808 PDPLGGWRRQPPGPS 822

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>IAA11_ORYSA (Q75GK0) Auxin-responsive protein IAA11 (Indoleacetic acid-induced|
           protein 11)
          Length = 233

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 30/117 (25%), Positives = 40/117 (34%), Gaps = 30/117 (25%)
 Frame = +1

Query: 181 TELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEV------LPPAPSAAGGK-GK 339
           TELRLGLPG               EL      KRGF++ +       P AP+A  G+ G 
Sbjct: 9   TELRLGLPGAG-------------ELAARSSGKRGFAETIDLKLKLQPAAPAAVSGEEGA 55

Query: 340 ETSGDEKDXXXXXXXXXXXXXXXX-----------------------GWPPIRSYRK 441
           +   ++ D                                       GWPP+RS+RK
Sbjct: 56  QEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRK 112

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>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced|
           protein ARG4)
          Length = 196

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 30/94 (31%), Positives = 40/94 (42%)
 Frame = +1

Query: 160 ADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGK 339
           +D +LK TELRLGLPG E  +   +   T   L   K   R  S + +  + ++   +  
Sbjct: 9   SDLNLKATELRLGLPGTEEKEDNNL--RTHAVLRNNKRQVRETSQDSVSISKASHHQQHV 66

Query: 340 ETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           ET                      GWPPIRSYRK
Sbjct: 67  ET-----------VSAPPPKAKIVGWPPIRSYRK 89

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>IAA4_ARATH (P33077) Auxin-responsive protein IAA4 (Indoleacetic acid-induced|
           protein 4) (Auxin-induced protein AUX2-11)
          Length = 186

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 29/91 (31%), Positives = 34/91 (37%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKETS 348
           +LK TELRLGLPG E              +   K  KR     VLP           E +
Sbjct: 12  NLKATELRLGLPGTEE------------TVSCGKSNKR-----VLP-----------EAT 43

Query: 349 GDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
             E +                GWPP+RSYRK
Sbjct: 44  EKEIESTGKTETASPPKAQIVGWPPVRSYRK 74

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>IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleacetic acid-induced|
           protein 10)
          Length = 281

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
 Frame = +1

Query: 163 DDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFS-DEVLPPAPSAAGGKGK 339
           DD+     L LG    +     P    T  +L PA       S     P A +AAGGK  
Sbjct: 30  DDEELELGLSLGSKKQQQQQHAPCRILTARDLQPAAALSPDSSVSSSSPAAAAAAGGKRA 89

Query: 340 ETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYR 438
           E                       GWPPIR +R
Sbjct: 90  EGPTATTSPGTVASGHPHSSFGVVGWPPIRQFR 122

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>IAA16_ARATH (O24407) Auxin-responsive protein IAA16 (Indoleacetic acid-induced|
           protein 16)
          Length = 236

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
 Frame = +1

Query: 169 DLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEV---LPPAPSAAGGKGK 339
           + + TELRLGLPG               E+      KRGFS+ V   L  + +A     K
Sbjct: 3   NFEATELRLGLPGGNHGG----------EMAGKNNGKRGFSETVDLKLNLSSTAMDSVSK 52

Query: 340 ETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
               + K+                GWPP+RS+RK
Sbjct: 53  VDLENMKEKVVKPPAKAQVV----GWPPVRSFRK 82

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>AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic acid-induced|
           protein ARG12)
          Length = 188

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 31/95 (32%), Positives = 36/95 (37%)
 Frame = +1

Query: 157 RADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKG 336
           + D  L+ TELRLGLPG    +               K  KR FSD     + S   GK 
Sbjct: 3   KEDLGLEITELRLGLPGAGGENNTDKDKN--------KNKKRVFSDIEGENSSSEEDGK- 53

Query: 337 KETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           KET                      GWPP+ SYRK
Sbjct: 54  KETKNQ-----------------VVGWPPVCSYRK 71

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
 Frame = -3

Query: 445 VSCGSCGLVAIPPPEPWQQAAAVRRPSCPSHP--RTSPCLSRRRQTAQAAGPRP-RTLAW 275
           +  G  G    PPP P++Q   V  P+ PS P   ++P L +R  +     P P R LA 
Sbjct: 239 IRTGPSGQSLAPPPPPYRQPPGV--PNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAP 296

Query: 274 RPWRAEAPVWWWRRPGGGPATRSREVRGGA 185
            P  + +P     RP   P  R    RG A
Sbjct: 297 PPPTSASPSLLSNRP--PPPARDPPSRGAA 324

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>AUX28_SOYBN (P13089) Auxin-induced protein AUX28|
          Length = 243

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
 Frame = +1

Query: 181 TELRLGLPG--------------CESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPS 318
           TELRLGLPG               E+       + TT++L+    +K     E    A +
Sbjct: 6   TELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSK-----EAATTAAA 60

Query: 319 AAGGKGK-ETSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           AA    K +T   EK                 GWPP+RS+RK
Sbjct: 61  AADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRK 102

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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
 Frame = -3

Query: 445  VSCGSCGLVA---IPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAW 275
            +SC   GL      PPP PW      RR +    PR  P   R    A AA P       
Sbjct: 1183 LSCSHDGLDGGWWAPPPPPWAAGPPPRRRARCGCPRPHPHRPRASHRAPAAAPHHH---- 1238

Query: 274  RPWRAEAPVWWWRRPGGGPATRSRE 200
               R       W  P   P +RS E
Sbjct: 1239 ---RHRRAAGGWDFPPPAPTSRSLE 1260

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
 Frame = -3

Query: 445 VSCGSCGLVAIPPPEPWQQAAAVRRPSCPSHP--RTSPCLSRRRQTAQAAGPRP-RTLAW 275
           +  G  G    PPP P++Q   V  P+ PS P   ++P L +R  +     P P R LA 
Sbjct: 239 IRTGPSGQSLAPPPPPYRQPPGV--PNGPSSPTNESAPELPQRHNSLHRKTPGPVRGLAP 296

Query: 274 RPWRAEAPVWWWRRPGGGPATRSREVRGGA 185
            P  +  P     RP   P  R    RG A
Sbjct: 297 PPPTSATPSLLSNRP--PPPAREPPSRGAA 324

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>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 18/69 (26%), Positives = 27/69 (39%)
 Frame = +1

Query: 133 GLSAAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPA 312
           G+    G + DD + G +   G PG   P    +        LP     +GF  ++ PP 
Sbjct: 558 GIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGLPGVPGTKGFPGDIGPPG 617

Query: 313 PSAAGGKGK 339
               G KG+
Sbjct: 618 QGLPGPKGR 626

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>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 751

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
 Frame = -3

Query: 394 QQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGP--RPRTLAWRPWRAEAP--VWWWRRPG 227
           ++ A    PSC   P   PCLS  R T  ++ P  +P + A  P  A +P  V       
Sbjct: 381 EKKAKTSTPSCAKTPSNRPCLSPTRPTPGSSDPLIKPSSPAVCPEPATSPKYVSSVTPRN 440

Query: 226 GGPATRSREVRG 191
           G P T+  +++G
Sbjct: 441 GSPGTKQMKLKG 452

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>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
 Frame = -3

Query: 394 QQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGP--RPRTLAWRPWRAEAP--VWWWRRPG 227
           ++ A    PSC   P   PCLS  R T  ++ P  +P + A  P  A +P  V       
Sbjct: 362 EKKAKTSTPSCAKAPSHRPCLSPTRPTLGSSDPLIKPSSPAVSPEPATSPKHVSSVTPRN 421

Query: 226 GGPATRSREVRG 191
           G P T+  +++G
Sbjct: 422 GSPGTKQMKLKG 433

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>TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repeat protein 9)|
           (Fragment)
          Length = 336

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
 Frame = +3

Query: 210 RVAGPPP---GRRHHHT--GASARQGRQARVLGRGPAACAVCRRRERQGDVRG*EGQEGR 374
           R A P P   G RH     G    +  ++R  G GPA+ A            G  G  GR
Sbjct: 7   RSASPGPASTGPRHPQVAEGGGRERAARSREAGEGPASEAAAAAAGAASGSSGENGSAGR 66

Query: 375 RTAAAC 392
           +TAA C
Sbjct: 67  QTAAGC 72

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>MSX2_CHICK (P28362) Homeobox protein MSX-2 (CHOX-8) (GHox-8)|
          Length = 259

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = +1

Query: 82  VHVLLVPMSPPLQLDYIGLSAAAGGRADDDLKGTELRLGLPGCESPDRR--PVAATTTLE 255
           V  L+    PP +L      AAAGG AD    GT   L LPG  S D    P A T T +
Sbjct: 37  VEALMSDKKPPKELPL----AAAGGSADGATVGTSRNLLLPGHGSRDAHSPPGALTKTFD 92

Query: 256 LLPAK 270
               K
Sbjct: 93  TASVK 97

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>MOT3_HUMAN (O95907) Monocarboxylate transporter 3 (MCT 3)|
          Length = 504

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
 Frame = -3

Query: 457 GGAIVSCGSCGLVAIPP----PEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRP 290
           GG ++ C +CG V  PP    P P + +A  R    P          + R+ +    PR 
Sbjct: 181 GGLLLHCCACGAVMRPPPGPGPRPRRDSAGDRAGDAPGEAEADGAGLQLREASPRVRPRR 240

Query: 289 RTL 281
           R L
Sbjct: 241 RLL 243

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>IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic acid-induced|
           protein 6)
          Length = 335

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 40/156 (25%), Positives = 50/156 (32%), Gaps = 52/156 (33%)
 Frame = +1

Query: 130 IGLSAAAGGRADDDLKGTELRLGLPGC----------------ESPDRR----PVAATTT 249
           +G S  AG   ++D K  +L+LGLPG                 ESP       P  + TT
Sbjct: 33  LGRSRNAGFDGEEDKK-LDLKLGLPGFIEDDEAETLRDYRLQQESPSLSLSFFPKHSKTT 91

Query: 250 LELLPAKGAKRGFSDEVLPPA-------PSAAGGKGKETSGDEKDXXXX----------- 375
                  GAKRGF D V             A  G GKE + +E                 
Sbjct: 92  SSTTTTTGAKRGFIDTVEDKTEGYNDQKQQARAGCGKELAVEEMIAAVSERKKGCCPPPP 151

Query: 376 --------------XXXXXXXXXXXXGWPPIRSYRK 441
                                     GWPPIRS+R+
Sbjct: 152 PPHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRR 187

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>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
 Frame = -3

Query: 445  VSCGSCGLVA---IPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAW 275
            +SC   GL      PPP PW       R +    PR  P   R    A AA P       
Sbjct: 1183 LSCSHDGLDGGWWAPPPPPWAAGPPAPRRARCGCPRPHPHRPRASHRAPAAAPHHH---- 1238

Query: 274  RPWRAEAPVWWWRRPGGGPATRSRE 200
               R       W  P   P +RS E
Sbjct: 1239 ---RHRRAAGGWDLPPPAPTSRSLE 1260

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>IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleacetic acid-induced|
           protein 19) (MASSUGU2 protein)
          Length = 197

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/90 (27%), Positives = 35/90 (38%)
 Frame = +1

Query: 172 LKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKETSG 351
           L+ TELRLGLPG +  ++       T   + + G+    SD+      S+ G   K    
Sbjct: 8   LEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSN---SDQCESGVVSSGGDAEKVNDS 64

Query: 352 DEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
                               GWPP+ SYRK
Sbjct: 65  P------------AAKSQVVGWPPVCSYRK 82

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>CCHL_NEUCR (P14187) Cytochrome c heme lyase (EC 4.4.1.17) (CCHL)|
           (Holocytochrome-C synthase)
          Length = 346

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -3

Query: 415 IPPPEPWQQAA--AVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLA 278
           + PP     AA  AV  PSCP H +T   LS  +    A  P P   A
Sbjct: 16  VVPPSHKDLAASGAVPPPSCPMHNKTMDALSAHKPVTPAPEPTPAAAA 63

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>AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic acid-induced|
           protein ARG3)
          Length = 194

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
 Frame = +1

Query: 172 LKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFS--DEVLPPAPSAAGGKGKET 345
           L+ TELRLGLP  E        A    E    K  KR FS  D+V     S+ GG     
Sbjct: 8   LEITELRLGLPDAE----HVAVANKNGE----KKNKRVFSEIDDVGDENSSSGGG----- 54

Query: 346 SGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
            GD K                 GWPP+ SYRK
Sbjct: 55  -GDRK---------MENKNQVVGWPPVCSYRK 76

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>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/68 (35%), Positives = 32/68 (47%)
 Frame = -3

Query: 388  AAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAWRPWRAEAPVWWWRRPGGGPATR 209
            A+   R SCPS P  SP     R    +A P P   +  P +  AP+     PG  PA+ 
Sbjct: 1081 ASLPARVSCPS-PHPSP---EARAPLASASPGPGDPS-SPLQHPAPLGTQEPPGAPPASP 1135

Query: 208  SREVRGGA 185
            SRE+  G+
Sbjct: 1136 SREMAKGS 1143

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>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 26/75 (34%), Positives = 29/75 (38%)
 Frame = +1

Query: 112  PLQLDYIGLSAAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFS 291
            P Q   IGL   AG       KG     GLPG E P   P          P    ++G  
Sbjct: 860  PGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGA-----PGFPGQKG-- 912

Query: 292  DEVLPPAPSAAGGKG 336
            DE LP  P  +G KG
Sbjct: 913  DEGLPGLPGVSGMKG 927

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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 409  PPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPR 293
            PP  WQQA   ++   P  PR  P +S + Q A  AGPR
Sbjct: 2018 PPGQWQQAPIPQQQPMPGMPR--PVMSMQAQAA-VAGPR 2053

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>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D) (EB11)
          Length = 1336

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
 Frame = -3

Query: 445  VSCGSCGLVA---IPPPEPWQQAAAVRRPSCPSHPRTSPCLSR-RRQTAQAAGPRPRTLA 278
            +SC   GL      PPP PW      RR +    PR+ P   R   +T  AA P      
Sbjct: 1195 LSCSHDGLDGGWWAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHH--- 1251

Query: 277  WRPWRAEAPVWWWRRPGGGPATRSRE 200
                R       W  P   P +RS E
Sbjct: 1252 ----RHRRAAGGWDLPPPAPTSRSLE 1273

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -3

Query: 415 IPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAWRPWRAEA 254
           +PPP P+        P  P +    P +SR     ++A P PR L W P   EA
Sbjct: 828 VPPPPPY----LANYPGFPENGTPGPPISRF-PLEESAPPGPRPLPWPPGNDEA 876

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -3

Query: 415 IPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLAWRPWRAEA 254
           +PPP P+        P  P +    P +SR     ++A P PR L W P   EA
Sbjct: 829 VPPPPPY----LANYPGFPENGTPGPPISRF-PLEESAPPGPRPLPWPPGNDEA 877

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>XYND_CELFI (P54865) Endo-1,4-beta-xylanase D precursor (EC 3.2.1.8) (Xylanase|
           D) (XYLD)
          Length = 644

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +3

Query: 378 TAAACCQGSGGGMATNPQLPQDTMAP 455
           T AA C GSGGG AT    P  T  P
Sbjct: 325 TPAATCAGSGGGTATPTPTPTPTPTP 350

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>AUX22_SOYBN (P13088) Auxin-induced protein AUX22|
          Length = 195

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
 Frame = +1

Query: 172 LKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAK-RGFS--DEVLPPAPSAAGGKGKE 342
           L+ TELRLGLP  E            + ++  K  K R FS  D+ +    S++GG    
Sbjct: 8   LEITELRLGLPDAEHQ----------VSVVNKKNEKKRAFSEIDDGVGDENSSSGG---- 53

Query: 343 TSGDEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
             GD K                 GWPP+ SYRK
Sbjct: 54  --GDRK--------METNKSQVVGWPPVCSYRK 76

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>IAA6_PEA (P49680) Auxin-induced protein IAA6|
          Length = 179

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 28/90 (31%), Positives = 35/90 (38%)
 Frame = +1

Query: 172 LKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKGKETSG 351
           L+ TELRLGL  C  P +                 KR FS+  +       GG G   S 
Sbjct: 8   LEITELRLGL-SCGEPKKNE--------------KKRMFSE--IDGGVEENGGSGDRKSV 50

Query: 352 DEKDXXXXXXXXXXXXXXXXGWPPIRSYRK 441
           D+K+                GWPP+ SYRK
Sbjct: 51  DKKNQVV-------------GWPPVCSYRK 67

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>NIFB_KLEPN (P10390) FeMo cofactor biosynthesis protein nifB|
          Length = 468

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 280 AWRPWRAEAPVWWWRRPGGGPA 215
           AWRP     P WW +R G  PA
Sbjct: 439 AWRPVSEVLPAWWQQRRGSWPA 460

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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 409  PPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPR 293
            PP  WQQA   ++   P  PR  P +S + Q A  AGPR
Sbjct: 2017 PPGQWQQAPLPQQQPMPGLPR--PVISMQAQAA-VAGPR 2052

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>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
          Length = 1162

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = +1

Query: 100 PMSPPLQLDYIGLSAAAGGRADDDLKGTELRLGLPGCESPDRRPVAATTTLELLPAKGAK 279
           P  PP    Y  ++       ++D +  E    L   E  +R+P A  +   + PA    
Sbjct: 17  PPRPPPAFKYQFVTEPEDEEDEEDEEEEEDDEDLEELEVLERKPAAGLSAAPVPPAAAPL 76

Query: 280 RGFSDEVLPPAP 315
             FS + +PPAP
Sbjct: 77  LDFSSDSVPPAP 88

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 2 (Brain cyclic nucleotide gated
            channel 2) (BCNG-2)
          Length = 889

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
 Frame = -3

Query: 445  VSCGSCGLVAIPPPEPWQQAAAVR---------RPSCPSHPRTSPCLSRRRQTAQAAGP- 296
            ++ GS  LV  PPP P   AA+            P+ P  PRTSP        A  AGP 
Sbjct: 750  LALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSP--YGGLPAAPLAGPA 807

Query: 295  ---RPRTLAWRPWRAEAPVWWWRRPGGGPATR 209
               R  + A RP  A  P      PG   +TR
Sbjct: 808  LPARRLSRASRPLSASQPSLPHGAPGPAASTR 839

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>NTF2_CLAHE (Q8NJ52) Nuclear transport factor 2 (NTF-2) (Allergen Cla h ?)|
          Length = 125

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 220 DRRPVAATTTLELLPAKGAKRGFSD 294
           +RRP++ T T +LLPA GA   F+D
Sbjct: 92  ERRPMSYTQTFQLLPADGAYYVFND 116

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>HSP1_ISOMA (P42136) Sperm protamine P1|
          Length = 66

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 264 RQGRQARVLGRGPAACAVCRRRERQGDVRG*EGQEGRRTAA 386
           R+GR++RV GR  A      RR R+G  R   G++GRR+ +
Sbjct: 17  RRGRRSRVRGR-DARQGRSSRRRRRGKGRAHSGKKGRRSGS 56

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>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
           SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = -3

Query: 442 SCGSCGLVAI----PPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLA 278
           S  S  LV +    P P P  +++ V RPS  ++   SP  SR    A +A P+P++ A
Sbjct: 699 SSSSSSLVPVSGSGPGPSP-ARSSPVNRPSSATNKALSPITSRSPGVAVSAPPKPQSPA 756

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>BCCP_PROFR (P02904) Methylmalonyl-CoA carboxyltransferase 1.3S subunit (EC|
           2.1.3.1) (Biotin carboxyl carrier protein of
           transcarboxylase) (Transcarboxylase, 1.3S subunit)
          Length = 123

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 335 PFPPAADGAGGRTSSENPRLAPLAGRSSSVVV 240
           P P AA GAG   + E    APLAG  S ++V
Sbjct: 39  PAPRAAGGAGAGKAGEGEIPAPLAGTVSKILV 70

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
 Frame = -3

Query: 412  PPPEPWQQAAAVRRPS--------CPSHPRTSPCLSRRRQTAQAAGPRPRTLAWRPWRAE 257
            P  +P Q+A     P         CP+ PR  PC  RR  +  + G   ++ A  P    
Sbjct: 829  PGTQPAQEAQRGPSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTGSSHQSTARGP--GG 886

Query: 256  APVWWWRRPGGGPA 215
            +P    R+PG  P+
Sbjct: 887  SPQEGTRQPGPTPS 900

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>KHSE_HALSA (Q9HP55) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 301

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 285 VLGRGPAACAVCRRRERQGDVRG-*EGQEGRRTAAACCQGSGGGMATNPQLPQDTMAP 455
           + G GP   AVCRRR+R+       +G +    AA+  Q   G  AT      D  AP
Sbjct: 244 ISGSGPGVVAVCRRRDRKRVAAALVDGFDSAGVAASAYQTRIGDGATRLAADGDDRAP 301

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 418 AIPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTAQAAGPRPRTLA 278
           A P P    +A A ++P+ PS P  +P    R        PRP   A
Sbjct: 95  AAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAA 141

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>TWST1_GORGO (Q8MI06) Twist-related protein 1|
          Length = 203

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +3

Query: 222 PPPGRRHHHTGASARQGRQARVLGRGPAACAVCRRRERQGDVRG*EGQEGRRTAAACCQG 401
           PP G+R    G   R  R++   G GP   A        GD  G   Q  R   +A C G
Sbjct: 29  PPSGKRG---GRKRRSSRRSAGGGAGPGGAA--SGGAGGGDEPGSPAQGKRGKKSAGCGG 83

Query: 402 SGGGMA 419
            GGG A
Sbjct: 84  GGGGGA 89

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>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (Contrin) (MSY2 homolog)
          Length = 364

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = -3

Query: 403 EPWQQAAAVRRPSCPSHPRTSPCLSRRRQTA----QAAGPR 293
           +P Q  A   RP  P  PR  P   RRRQ A    QA GPR
Sbjct: 303 KPSQGPADGSRPE-PQRPRNRPYFQRRRQQAPGPQQAPGPR 342

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>PCSK9_MOUSE (Q80W65) Proprotein convertase subtilisin/kexin type 9 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC9)
           (Subtilisin/kexin-like protease PC9) (Neural
           apoptosis-regulated convertase 1) (NARC-1)
          Length = 694

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = +1

Query: 94  LVPMSPPLQLDYIGLSAAAGGRADDDLKGTELRLGLPGCES--PDRRPVAATTT 249
           L+P+ PPL L  + L     G  D+D    EL L LP  E    D     AT T
Sbjct: 13  LLPLLPPLLLLLLLLCPTGAGAQDEDGDYEELMLALPSQEDGLADEAAHVATAT 66

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>CABL1_HUMAN (Q8TDN4) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)|
           (Ik3-1)
          Length = 633

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 442 SCGSCGLVAIPPPEPWQQAAAVRRPSCPSHPRTSPCLSRRRQTA 311
           + G+ GL   PPP+P  Q AA      P  P   P +  RR+ A
Sbjct: 22  AAGASGLQQ-PPPQPQPQPAAAAPAQPPPEPPRKPRMDPRRRQA 64

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>PUR9_PSESM (Q87VR9) Bifunctional purine biosynthesis protein purH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 534

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -3

Query: 343 SPCLSRRRQTAQAAGPRPRTLAWRPWRAEAPVWWWRRPGGGPATRSREV 197
           +P +S   ++  A+    R L    W    P W ++R  GG   +SR++
Sbjct: 350 APSVSAEARSIIASKANVRLLTSGQWSERLPAWDYKRVNGGLLVQSRDI 398

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>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
 Frame = +1

Query: 91   LLVPMSPPLQLDYIGLSAAAGGRADDDL------------KGTELRLGLPGCESPDRRPV 234
            ++ P  PP  L   G S   G + DD L            KG++   GLPG   P     
Sbjct: 900  MMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGP----- 954

Query: 235  AATTTLELLPAKGAKRGFSDEVLPPAPSAAGGKG 336
                   LL +KG K    +  LP  P  +G KG
Sbjct: 955  ---MDPNLLGSKGEK---GEPGLPGIPGVSGPKG 982

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>TNR4_HUMAN (P43489) Tumor necrosis factor receptor superfamily member 4|
           precursor (OX40L receptor) (ACT35 antigen) (TAX
           transcriptionally-activated glycoprotein 1 receptor)
           (CD134 antigen)
          Length = 277

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
 Frame = -3

Query: 403 EPWQQAAAVRRPSCPSHPRTSPCLSRRR-----QTAQAAGPRPRTLAWRPWRAEAPVWWW 239
           +PW       + +      +S  +   R     Q  +  GP  R +  +P  A      W
Sbjct: 142 KPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEA------W 195

Query: 238 RRPGGGPATRSREVRGG 188
            R   GP+TR  EV GG
Sbjct: 196 PRTSQGPSTRPVEVPGG 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.137    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,781,448
Number of Sequences: 219361
Number of extensions: 1037880
Number of successful extensions: 3713
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 3394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3673
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result