ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016304.1| Zea mays clone Contig137 mRNA sequence 224 2e-55
2gb|AY109752.1| Zea mays CL893_1 mRNA sequence 174 2e-40
3gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, parti... 121 2e-24
4gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 113 6e-22
5dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 6e-22
6ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA 107 3e-20
7gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full... 107 3e-20
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
9dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
10dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
11dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
12gb|AY106009.1| Zea mays PCO149009 mRNA sequence 68 3e-08
13ref|XM_472835.1| Oryza sativa (japonica cultivar-group), predic... 48 0.028
14emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 48 0.028
15emb|CR609945.1| full-length cDNA clone CS0DF003YB09 of Fetal bra... 48 0.028
16gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, comple... 48 0.028
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
18dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
19emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 48 0.028
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
21dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
22gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
23emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 46 0.11
24emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chro... 42 1.7
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.7
26gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.8
27gb|DQ217932.1| Homo sapiens triggering receptor expressed on mye... 40 6.8
28ref|XM_474621.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
29gb|AY710565.1| Uncultured Cycloclasticus sp. clone SIMO-1125 16S... 40 6.8
30gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 6.8
31ref|XM_414418.1| PREDICTED: Gallus gallus similar to MAGI1c alph... 40 6.8
32gb|BC013789.1| Homo sapiens nescient helix loop helix 1, mRNA (c... 40 6.8
33gb|AF432322.1| Uncultured gamma proteobacterium 0%N-26d-61 16S r... 40 6.8
34emb|AJ810692.1| Uncultured gamma proteobacterium 16S rRNA gene, ... 40 6.8
35emb|AJ810633.1| Uncultured gamma proteobacterium 16S rRNA gene, ... 40 6.8
36gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR... 40 6.8
37gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, co... 40 6.8
38gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence 40 6.8
39emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on ch... 40 6.8
40gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.8
41gb|AF534241.1| Uncultured gamma proteobacterium clone gamma cg2 ... 40 6.8
42emb|AL133404.8| Human DNA sequence from clone RP1-238O23 on chro... 40 6.8
43emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
44gb|BT007547.1| Synthetic construct Homo sapiens nescient helix l... 40 6.8
45gb|BT006859.1| Homo sapiens nescient helix loop helix 1 mRNA, co... 40 6.8
46emb|AJ630712.1| Uncultured gamma proteobacterium partial 16S rRN... 40 6.8
47dbj|AB071994.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.8
48dbj|AB071993.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.8
49dbj|AB071992.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.8
50dbj|AB071991.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.8
51gb|AY536224.1| Uncultured bacterium clone LAgut-16S-P12 16S ribo... 40 6.8
52gb|AC183495.1| Brassica oleracea Contig A, complete sequence 40 6.8
53gb|AY026915.1| Cycloclasticus spirillensus 16S ribosomal RNA gen... 40 6.8
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
55dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
56dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
57gb|AY891682.1| Synthetic construct Homo sapiens clone FLH012862.... 40 6.8
58gb|AY889122.1| Synthetic construct Homo sapiens clone FLH012865.... 40 6.8
59dbj|AK120016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
60gb|AY580830.1| Uncultured gamma proteobacterium clone PI_4p11d 1... 40 6.8
61gb|AY580827.1| Uncultured gamma proteobacterium clone PI_RT101 1... 40 6.8
62gb|AY580820.1| Uncultured gamma proteobacterium clone PI_RT117 1... 40 6.8
63gb|AC131718.5| Mus musculus BAC clone RP23-171B16 from 6, comple... 40 6.8
64gb|AF148215.1|AF148215 Cycloclasticus oligotrophus 16S ribosomal... 40 6.8
65dbj|AB086228.1| Dibenzofuran-degrading bacterium DBF-MAK gene fo... 40 6.8
66gb|AF093004.1|AF093004 Cycloclasticus sp. W 16S ribosomal RNA ge... 40 6.8
67gb|AF093003.1|AF093003 Cycloclasticus sp. E 16S ribosomal RNA ge... 40 6.8
68gb|AF093002.1|AF093002 Cycloclasticus sp. G 16S ribosomal RNA ge... 40 6.8
69gb|DQ234087.2| Uncultured proteobacterium clone DS002 16S riboso... 40 6.8
70gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.8
71gb|U12624.1|CPU12624 Cycloclasticus pugetii PS-1 16S rRNA gene 40 6.8
72gb|L34955.1|CYK16SR Cycloclasticus pugetii 16S ribosomal RNA (16... 40 6.8
73gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, comple... 40 6.8
74dbj|AB080114.1| Cycloclasticus sp. H4 gene for 16S rRNA, partial... 40 6.8
75dbj|AB080113.1| Cycloclasticus sp. E3 gene for 16S rRNA, partial... 40 6.8
76dbj|AB080112.1| Cycloclasticus sp. E2 gene for 16S rRNA, partial... 40 6.8
77dbj|AB080111.1| Cycloclasticus sp. A5 gene for 16S rRNA, partial... 40 6.8
78gb|U57920.1|CNU57920 Cycloclasticus N3-PA321 16S rRNA gene sequence 40 6.8
79ref|NM_005598.2| Homo sapiens nescient helix loop helix 1 (NHLH1... 40 6.8
80gb|M97507.1|HUMHEN1A Homo sapiens helix-loop-helix protein (HEN1... 40 6.8
81gb|M96739.1|HUMNSCL1A Human NSCL-1 mRNA sequence 40 6.8 
>gb|BT016304.1| Zea mays clone Contig137 mRNA sequence
          Length = 1191

 Score =  224 bits (113), Expect = 2e-55
 Identities = 222/257 (86%), Gaps = 1/257 (0%)
 Strand = Plus / Plus

                                                                       
Query: 232 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
           ||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct: 219 cggcgccgcaccacgtggacctcgcggacctcctcagcgtggccgggccgttccacacgt 278

                                                                       
Query: 292 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
           ||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||||||
Sbjct: 279 tcctggactacctgcagaagaccggcgtcatcgagaccttccagagccaggcgaacgaca 338

                                                                       
Query: 352 ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
           | |||  ||  || |||||| | ||||||||||||||||| || |||||||||||||   
Sbjct: 339 cgaagcggggcggcatcaccgtcttcgtgcccaaggactcggcgttcgcggcgctgaagc 398

                                                                       
Query: 412 cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
            ||| |||||||||||||||||    |||||||||| ||||||| |||||| ||||||||
Sbjct: 399 agaccacgttcgccaacctcacccaggaccagctcaggtcgctgctgctgtgccacgcgc 458

                            
Query: 472 tgccc-agtactactcg 487
           ||||| |||||||||||
Sbjct: 459 tgcccaagtactactcg 475
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>gb|AY109752.1| Zea mays CL893_1 mRNA sequence
          Length = 1101

 Score =  174 bits (88), Expect = 2e-40
 Identities = 163/188 (86%)
 Strand = Plus / Plus

                                                                       
Query: 246 gtggacctcgcggatctcctgagcgtggccggcccgttccacaccttcctggactacctc 305
           |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 267 gtggacctcgcggacctcctcagcgtggccgggccgttccacacgttcctggactacctg 326

                                                                       
Query: 306 cagaagaccagcgtcctggagacgttccagagcaaggcgaacgacaccaaggaggagggg 365
           ||||||||| ||||| | ||||| ||||||||| ||||||||||||| |||  ||  || 
Sbjct: 327 cagaagaccggcgtcatcgagaccttccagagccaggcgaacgacacgaagcggggcggc 386

                                                                       
Query: 366 atcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaacgacgacgttcgcc 425
           |||||| | ||||||||||||||||| || |||||||||||||    ||| |||||||||
Sbjct: 387 atcaccgtcttcgtgcccaaggactcggcgttcgcggcgctgaagcagaccacgttcgcc 446

                   
Query: 426 aacctcac 433
           ||||||||
Sbjct: 447 aacctcac 454
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>gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, partial sequence
          Length = 842

 Score =  121 bits (61), Expect = 2e-24
 Identities = 185/224 (82%), Gaps = 3/224 (1%)
 Strand = Plus / Plus

                                                                       
Query: 246 gtggacctcgcggatctcctgagcgtggccggcccgttccacaccttcctggactacctc 305
           |||||||| ||||  |||||| |||||||||| ||||||||||||||||||  |||||| 
Sbjct: 200 gtggacctggcggcgctcctgggcgtggccgggccgttccacaccttcctgagctacctg 259

                                                                       
Query: 306 cagaagaccagcgtcctggagacgttccagagcaaggcgaacgacaccaaggaggagggg 365
           |||||||| | |||  | ||||| ||||||||  |||| ||| | |||||||||  ||| 
Sbjct: 260 cagaagacgaacgtgatcgagaccttccagaggcaggccaacaagaccaaggag--gggc 317

                                                                       
Query: 366 atcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaacgacgacgttcgcc 425
           || ||||| ||||| ||||||||||| || ||||||||||| |  | | | || ||| ||
Sbjct: 318 at-accatcttcgtccccaaggactcggcgttcgcggcgctcaagaagtccaccttctcc 376

                                                       
Query: 426 aacctcactagcgaccagctcaagtcgctgatgctgtaccacgc 469
           |||||||| ||||||||||||||| ||||| | |||||||||||
Sbjct: 377 aacctcacgagcgaccagctcaagacgctgctcctgtaccacgc 420
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score =  113 bits (57), Expect = 6e-22
 Identities = 149/179 (83%), Gaps = 3/179 (1%)
 Strand = Plus / Minus

                                                                         
Query: 222   gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 281
             |||||||| |||||||||| | | || |||||||| || ||||| ||||||||||| |||
Sbjct: 85528 gcgccggcgccggcgccgcactacgtcgacctcgccgagctcctcagcgtggccgggccg 85469

                                                                         
Query: 282   ttccacaccttcctggactacctccagaagaccagcgtcctggagacgttccagagcaag 341
             |||||||| |||||  |||||||  ||||||| | |||| | ||||||||||||||| ||
Sbjct: 85468 ttccacacgttcctcaactacctggagaagacgaacgtcatcgagacgttccagagccag 85409

                                                                        
Query: 342   gcgaacgacaccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgc 400
             |||||| | ||||||||||  |   ||||||| ||||| ||||||||||| || |||||
Sbjct: 85408 gcgaacaagaccaaggagggcg---tcaccatcttcgtccccaaggactcggcgttcgc 85353



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 424   ccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcg 470
             ||||||||||  |||||||||||||| ||||| ||||||||||||||
Sbjct: 85329 ccaacctcaccggcgaccagctcaagacgctgctgctgtaccacgcg 85283
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>dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151O19, full
           insert sequence
          Length = 900

 Score =  113 bits (57), Expect = 6e-22
 Identities = 149/179 (83%), Gaps = 3/179 (1%)
 Strand = Plus / Plus

                                                                       
Query: 222 gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 281
           |||||||| |||||||||| | | || |||||||| || ||||| ||||||||||| |||
Sbjct: 240 gcgccggcgccggcgccgcactacgtcgacctcgccgagctcctcagcgtggccgggccg 299

                                                                       
Query: 282 ttccacaccttcctggactacctccagaagaccagcgtcctggagacgttccagagcaag 341
           |||||||| |||||  |||||||  ||||||| | |||| | ||||||||||||||| ||
Sbjct: 300 ttccacacgttcctcaactacctggagaagacgaacgtcatcgagacgttccagagccag 359

                                                                      
Query: 342 gcgaacgacaccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgc 400
           |||||| | ||||||||||  |   ||||||| ||||| ||||||||||| || |||||
Sbjct: 360 gcgaacaagaccaaggagggcg---tcaccatcttcgtccccaaggactcggcgttcgc 415



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 424 ccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcg 470
           ||||||||||  |||||||||||||| ||||| ||||||||||||||
Sbjct: 439 ccaacctcaccggcgaccagctcaagacgctgctgctgtaccacgcg 485
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>ref|XM_483207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1078

 Score =  107 bits (54), Expect = 3e-20
 Identities = 197/244 (80%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 232 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
           ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 205 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 264

                                                                       
Query: 292 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
           |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 265 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 324

                                                                       
Query: 352 ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
            ||   |||| ||||||||  ||||||| ||||||||| | || |||||| |||||   |
Sbjct: 325 gca---aggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcga 381

                                                                       
Query: 412 cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
            | || ||   || ||||||||   |||||||||||||||||||  ||||||||||||||
Sbjct: 382 ggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgc 441

               
Query: 472 tgcc 475
           ||||
Sbjct: 442 tgcc 445
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>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA
           sequence
          Length = 954

 Score =  107 bits (54), Expect = 3e-20
 Identities = 200/248 (80%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 222 gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 281
           |||||||| ||||| |||||| | |||||||| ||||  |||||   |||||||||||||
Sbjct: 164 gcgccggcgccggccccgcgctacgtggacctggcggcgctcctcgacgtggccggcccg 223

                                                                       
Query: 282 ttccacaccttcctggactacctccagaagaccagcgtcctggagacgttccagagcaag 341
           |||||||||||||| |  ||||| |||||||| |  ||  | ||||| ||||||  | ||
Sbjct: 224 ttccacaccttcctcggttacctgcagaagacgaaggtgatcgagaccttccaggcccag 283

                                                                       
Query: 342 gcgaacgacaccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcg 401
           || ||| | |||   || ||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct: 284 gccaacaagacc---gacgagggcatcaccatcttcgtccccaaggactcggccttcgcg 340

                                                                       
Query: 402 gcgctgagaacgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctg 461
           ||||| |  | | | || ||| |||||||||| ||||||||||||||| ||||| | || 
Sbjct: 341 gcgctcaagaagtccaccttctccaacctcaccagcgaccagctcaagacgctgctcctc 400

                   
Query: 462 taccacgc 469
           ||||||||
Sbjct: 401 taccacgc 408
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 3e-20
 Identities = 197/244 (80%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                            
Query: 232      cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
                ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 24812012 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 24811953

                                                                            
Query: 292      tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
                |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 24811952 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 24811893

                                                                            
Query: 352      ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
                 ||   |||| ||||||||  ||||||| ||||||||| | || |||||| |||||   |
Sbjct: 24811892 gca---aggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcga 24811836

                                                                            
Query: 412      cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
                 | || ||   || ||||||||   |||||||||||||||||||  ||||||||||||||
Sbjct: 24811835 ggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgc 24811776

                    
Query: 472      tgcc 475
                ||||
Sbjct: 24811775 tgcc 24811772
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1345_D02
          Length = 159613

 Score =  107 bits (54), Expect = 3e-20
 Identities = 197/244 (80%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                          
Query: 232    cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
              ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 112813 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 112754

                                                                          
Query: 292    tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
              |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 112753 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 112694

                                                                          
Query: 352    ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
               ||   |||| ||||||||  ||||||| ||||||||| | || |||||| |||||   |
Sbjct: 112693 gca---aggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcga 112637

                                                                          
Query: 412    cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
               | || ||   || ||||||||   |||||||||||||||||||  ||||||||||||||
Sbjct: 112636 ggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgc 112577

                  
Query: 472    tgcc 475
              ||||
Sbjct: 112576 tgcc 112573
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>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1506_F01
          Length = 121202

 Score =  107 bits (54), Expect = 3e-20
 Identities = 197/244 (80%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                         
Query: 232   cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
             ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 16458 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 16399

                                                                         
Query: 292   tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
             |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 16398 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 16339

                                                                         
Query: 352   ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
              ||   |||| ||||||||  ||||||| ||||||||| | || |||||| |||||   |
Sbjct: 16338 gca---aggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcga 16282

                                                                         
Query: 412   cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
              | || ||   || ||||||||   |||||||||||||||||||  ||||||||||||||
Sbjct: 16281 ggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgc 16222

                 
Query: 472   tgcc 475
             ||||
Sbjct: 16221 tgcc 16218
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>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full
           insert sequence
          Length = 1077

 Score =  107 bits (54), Expect = 3e-20
 Identities = 197/244 (80%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 232 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 291
           ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 205 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 264

                                                                       
Query: 292 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 351
           |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 265 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 324

                                                                       
Query: 352 ccaaggaggaggggatcaccatgttcgtgcccaaggactctgccttcgcggcgctgagaa 411
            ||   |||| ||||||||  ||||||| ||||||||| | || |||||| |||||   |
Sbjct: 325 gca---aggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcga 381

                                                                       
Query: 412 cgacgacgttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgc 471
            | || ||   || ||||||||   |||||||||||||||||||  ||||||||||||||
Sbjct: 382 ggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgc 441

               
Query: 472 tgcc 475
           ||||
Sbjct: 442 tgcc 445
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>gb|AY106009.1| Zea mays PCO149009 mRNA sequence
          Length = 2172

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                        
Query: 419  gttcgccaacctcactagcgaccagctcaagtcgctgatgctgtaccacgcgctgccc-a 477
            |||||||||||||||    |||||||||| ||||||| |||||| ||||||||||||| |
Sbjct: 2076 gttcgccaacctcacccaggaccagctcaggtcgctgctgctgtgccacgcgctgcccaa 2135

                      
Query: 478  gtactactcg 487
            ||||||||||
Sbjct: 2136 gtactactcg 2145
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>ref|XM_472835.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 792

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 217 ccccagcgccggctccggcgccgcgccatgtggacctcgc 256
           |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 104 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 143



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 326 gacgttccagagcaaggcgaacgacacc 353
           ||||||||||||| |||| |||||||||
Sbjct: 213 gacgttccagagccaggccaacgacacc 240
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 217   ccccagcgccggctccggcgccgcgccatgtggacctcgc 256
             |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 18543 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 18504



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 326   gacgttccagagcaaggcgaacgacacc 353
             ||||||||||||| |||| |||||||||
Sbjct: 18434 gacgttccagagccaggccaacgacacc 18407
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>emb|CR609945.1| full-length cDNA clone CS0DF003YB09 of Fetal brain of Homo sapiens
           (human)
          Length = 2166

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 210 ccgccgtccccagcgccggctccg 233
           ||||||||||||||||||||||||
Sbjct: 44  ccgccgtccccagcgccggctccg 21
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>gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, complete sequence
          Length = 132832

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 210   ccgccgtccccagcgccggctccg 233
             ||||||||||||||||||||||||
Sbjct: 53044 ccgccgtccccagcgccggctccg 53021
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 217      ccccagcgccggctccggcgccgcgccatgtggacctcgc 256
                |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 23575862 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 23575823



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 326      gacgttccagagcaaggcgaacgacacc 353
                ||||||||||||| |||| |||||||||
Sbjct: 23575753 gacgttccagagccaggccaacgacacc 23575726



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 206     cctcccgccgtccccagcgccggc 229
               |||||||||||||||| |||||||
Sbjct: 4721300 cctcccgccgtccccatcgccggc 4721323
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>dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B08, full
           insert sequence
          Length = 1166

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 217 ccccagcgccggctccggcgccgcgccatgtggacctcgc 256
           |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 176 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 215



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 326 gacgttccagagcaaggcgaacgacacc 353
           ||||||||||||| |||| |||||||||
Sbjct: 285 gacgttccagagccaggccaacgacacc 312
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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 217    ccccagcgccggctccggcgccgcgccatgtggacctcgc 256
              |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 131765 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 131726



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 326    gacgttccagagcaaggcgaacgacacc 353
              ||||||||||||| |||| |||||||||
Sbjct: 131656 gacgttccagagccaggccaacgacacc 131629
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 209      cccgccgtccccagcgccggctccggcgccgcgcc 243
                |||| ||||||| |||||||| |||||||||||||
Sbjct: 26090187 cccgtcgtccccggcgccggcgccggcgccgcgcc 26090221
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>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full
            insert sequence
          Length = 1760

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 209  cccgccgtccccagcgccggctccggcgccgcgcc 243
            |||| ||||||| |||||||| |||||||||||||
Sbjct: 1411 cccgtcgtccccggcgccggcgccggcgccgcgcc 1445
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 209      cccgccgtccccagcgccggctccggcgccgcgcc 243
                |||| ||||||| |||||||| |||||||||||||
Sbjct: 26018363 cccgtcgtccccggcgccggcgccggcgccgcgcc 26018397
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>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 209   cccgccgtccccagcgccggctccggcgccgcgcc 243
             |||| ||||||| |||||||| |||||||||||||
Sbjct: 21484 cccgtcgtccccggcgccggcgccggcgccgcgcc 21450
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>emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chromosome 1, complete
              sequence
          Length = 164200

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     gaccttcaagatgaggctcag 106
              |||||||||||||||||||||
Sbjct: 105742 gaccttcaagatgaggctcag 105722
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 223     cgccggctccggcgccgcgcc 243
               |||||||||||||||||||||
Sbjct: 2236326 cgccggctccggcgccgcgcc 2236346
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 222     gcgccggctccggcgccgcg 241
               ||||||||||||||||||||
Sbjct: 3072613 gcgccggctccggcgccgcg 3072594
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>gb|DQ217932.1| Homo sapiens triggering receptor expressed on myeloid cells 2 (TREM2)
            gene, complete cds
          Length = 8688

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  tgctctcctccccagcattc 164
            ||||||||||||||||||||
Sbjct: 6186 tgctctcctccccagcattc 6205
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>ref|XM_474621.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 206 cctcccgccgtccccagcgccggc 229
           |||||||||||||||| |||||||
Sbjct: 513 cctcccgccgtccccatcgccggc 490
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>gb|AY710565.1| Uncultured Cycloclasticus sp. clone SIMO-1125 16S ribosomal RNA
           gene, partial sequence
          Length = 275

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 155 gggcaaagcaggggaccttc 174
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aagatgaggctcagagcagg 112
             ||||||||||||||||||||
Sbjct: 29694 aagatgaggctcagagcagg 29713
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>ref|XM_414418.1| PREDICTED: Gallus gallus similar to MAGI1c alpha beta2 gamma
            (LOC416083), mRNA
          Length = 7647

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 212  gccgtccccagcgccggctccggc 235
            ||||||||||||||| ||||||||
Sbjct: 3146 gccgtccccagcgccagctccggc 3169
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>gb|BC013789.1| Homo sapiens nescient helix loop helix 1, mRNA (cDNA clone
           MGC:17696 IMAGE:3866861), complete cds
          Length = 2527

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 623 agcgccggcgccggcgccgcgcca 646
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>gb|AF432322.1| Uncultured gamma proteobacterium 0%N-26d-61 16S ribosomal RNA gene,
           partial sequence
          Length = 438

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 133 gggcaaagcaggggaccttc 152
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>emb|AJ810692.1| Uncultured gamma proteobacterium 16S rRNA gene, isolate MZ-36.NAPH
          Length = 457

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 143 gggcaaagcaggggaccttc 162
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>emb|AJ810633.1| Uncultured gamma proteobacterium 16S rRNA gene, isolate MZ-04.ONR
          Length = 415

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 126 gggcaaagcaggggaccttc 145
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>gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR4), PlmR3 (plmR3),
             PlmR2 (plmR2), Plm8 (plm8), Plm4 (plm4), Plm5 (plm5), Plm6
             (plm6), Plm7 (plm7), PlmT8 (plmT8), PlmT7 (plmT7), PlmT6
             (plmT6), PlmT5 (plmT5), PlmT4 (plmT4), PlmT3 (plmT3),
             PlmT2 (plmT2), PlmT1 (plmT1), Plm1 (plm1), Plm2-3
             (plm2-3), PlmJK (plmJK), PlmL (plmL), ChcA (chcA), PlmM
             (plmM), PlmR1 (plmR1), PlmI (plmI), PlmS2 (plmS2), PlmS3
             (plmS3), and PlmS4 (plmS4) genes, complete cds
          Length = 76196

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   tccgccggcggccgtcctcc 210
             ||||||||||||||||||||
Sbjct: 35210 tccgccggcggccgtcctcc 35191
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>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence
          Length = 189545

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     aagatgaggctcagagcagg 112
              ||||||||||||||||||||
Sbjct: 108509 aagatgaggctcagagcagg 108490
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>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    agaccagcgtcctggagacg 329
              ||||||||||||||||||||
Sbjct: 142086 agaccagcgtcctggagacg 142105
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>emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on chromosome 1 Contains the
             5' end of the COPA gene for coatomer protein complex
             subunit alpha, the gene for nicastrin (KIAA0253), the
             NHLH1 gene for nescient helix loop helix 1, the VANGL2
             gene for vang-like 2 (van gogh, Drosophila) and a CpG
             island, complete sequence
          Length = 102345

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   agcgccggctccggcgccgcgcca 244
             ||||||||| ||||||||||||||
Sbjct: 31933 agcgccggcgccggcgccgcgcca 31956
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     cgccggctccggcgccgcgc 242
               ||||||||||||||||||||
Sbjct: 2276822 cgccggctccggcgccgcgc 2276803
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>gb|AF534241.1| Uncultured gamma proteobacterium clone gamma cg2 16S ribosomal RNA
           gene, partial sequence
          Length = 500

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 346 gggcaaagcaggggaccttc 327
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>emb|AL133404.8| Human DNA sequence from clone RP1-238O23 on chromosome 6 Contains part
             of the a novel gene, the gene for triggering receptor
             expressed on myeloid cells 2 (TREM2), a novel gene, part
             of a novel gene, a pseudogene similar to soluble adenylyl
             cyclase (SAC),, complete sequence
          Length = 91511

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tgctctcctccccagcattc 164
             ||||||||||||||||||||
Sbjct: 41928 tgctctcctccccagcattc 41947
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>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06,
              complete sequence
          Length = 129608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 206    cctcccgccgtccccagcgccggc 229
              |||||||||||||||| |||||||
Sbjct: 111433 cctcccgccgtccccatcgccggc 111456
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>gb|BT007547.1| Synthetic construct Homo sapiens nescient helix loop helix 1 mRNA,
           partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
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>gb|BT006859.1| Homo sapiens nescient helix loop helix 1 mRNA, complete cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
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>emb|AJ630712.1| Uncultured gamma proteobacterium partial 16S rRNA gene, clone
           UNHYB_86
          Length = 460

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 278 gggcaaagcaggggaccttc 259
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>dbj|AB071994.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-48
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 179 gggcaaagcaggggaccttc 198
to top
>dbj|AB071993.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-34
          Length = 1526

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 179 gggcaaagcaggggaccttc 198
to top
>dbj|AB071992.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-4
          Length = 1529

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
to top
>dbj|AB071991.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-2
          Length = 1528

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
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>gb|AY536224.1| Uncultured bacterium clone LAgut-16S-P12 16S ribosomal RNA gene,
           partial sequence
          Length = 1409

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 178 gggcaaagcaggggaccttc 197
to top
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    agcgaccagctcaagtcgct 454
              ||||||||||||||||||||
Sbjct: 198159 agcgaccagctcaagtcgct 198178



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    agcgaccagctcaagtcgct 454
              ||||||||||||||||||||
Sbjct: 172631 agcgaccagctcaagtcgct 172650
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>gb|AY026915.1| Cycloclasticus spirillensus 16S ribosomal RNA gene, partial
           sequence
          Length = 1496

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 206      cctcccgccgtccccagcgccggc 229
                |||||||||||||||| |||||||
Sbjct: 16570884 cctcccgccgtccccatcgccggc 16570907
to top
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1460_H08
          Length = 113514

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   cctcccgccgtccccagcgccggc 229
             |||||||||||||||| |||||||
Sbjct: 91554 cctcccgccgtccccatcgccggc 91577
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>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:B1109A06
          Length = 171438

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 cctcccgccgtccccagcgccggc 229
           |||||||||||||||| |||||||
Sbjct: 833 cctcccgccgtccccatcgccggc 856
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>gb|AY891682.1| Synthetic construct Homo sapiens clone FLH012862.01L nescient helix
           loop helix 1 (NHLH1) mRNA, partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
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>gb|AY889122.1| Synthetic construct Homo sapiens clone FLH012865.01X nescient helix
           loop helix 1 (NHLH1) mRNA, complete cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
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>dbj|AK120016.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-B09, full
           insert sequence
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 cctcccgccgtccccagcgccggc 229
           |||||||||||||||| |||||||
Sbjct: 96  cctcccgccgtccccatcgccggc 119
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>gb|AY580830.1| Uncultured gamma proteobacterium clone PI_4p11d 16S ribosomal RNA
           gene gene, partial sequence
          Length = 661

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 100 gggcaaagcaggggaccttc 119
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>gb|AY580827.1| Uncultured gamma proteobacterium clone PI_RT101 16S ribosomal RNA
           gene gene, partial sequence
          Length = 875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 159 gggcaaagcaggggaccttc 178
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>gb|AY580820.1| Uncultured gamma proteobacterium clone PI_RT117 16S ribosomal RNA
           gene gene, partial sequence
          Length = 697

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 159 gggcaaagcaggggaccttc 178
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>gb|AC131718.5| Mus musculus BAC clone RP23-171B16 from 6, complete sequence
          Length = 199299

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     cccccattcccacctcatcc 21
             ||||||||||||||||||||
Sbjct: 93931 cccccattcccacctcatcc 93950
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>gb|AF148215.1|AF148215 Cycloclasticus oligotrophus 16S ribosomal RNA gene, partial
           sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 157 gggcaaagcaggggaccttc 176
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>dbj|AB086228.1| Dibenzofuran-degrading bacterium DBF-MAK gene for 16S rRNA, partial
           sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 185 gggcaaagcaggggaccttc 204
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>gb|AF093004.1|AF093004 Cycloclasticus sp. W 16S ribosomal RNA gene, complete sequence
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
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>gb|AF093003.1|AF093003 Cycloclasticus sp. E 16S ribosomal RNA gene, complete sequence
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
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>gb|AF093002.1|AF093002 Cycloclasticus sp. G 16S ribosomal RNA gene, complete sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
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>gb|DQ234087.2| Uncultured proteobacterium clone DS002 16S ribosomal RNA gene gene,
           partial sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     gcgccggctccggcgccgcg 241
               ||||||||||||||||||||
Sbjct: 1422615 gcgccggctccggcgccgcg 1422634
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>gb|U12624.1|CPU12624 Cycloclasticus pugetii PS-1 16S rRNA gene
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 180 gggcaaagcaggggaccttc 199
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>gb|L34955.1|CYK16SR Cycloclasticus pugetii 16S ribosomal RNA (16S rRNA) gene
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 180 gggcaaagcaggggaccttc 199
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>gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, complete sequence
          Length = 213473

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    cccccattcccacctcatcc 21
            ||||||||||||||||||||
Sbjct: 8442 cccccattcccacctcatcc 8461
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>dbj|AB080114.1| Cycloclasticus sp. H4 gene for 16S rRNA, partial sequence
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 110 gggcaaagcaggggaccttc 129
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>dbj|AB080113.1| Cycloclasticus sp. E3 gene for 16S rRNA, partial sequence
          Length = 1460

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 183 gggcaaagcaggggaccttc 202
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>dbj|AB080112.1| Cycloclasticus sp. E2 gene for 16S rRNA, partial sequence
          Length = 1432

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 183 gggcaaagcaggggaccttc 202
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>dbj|AB080111.1| Cycloclasticus sp. A5 gene for 16S rRNA, partial sequence
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 gggcaaagcaggggaccttc 92
          ||||||||||||||||||||
Sbjct: 59 gggcaaagcaggggaccttc 78
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>gb|U57920.1|CNU57920 Cycloclasticus N3-PA321 16S rRNA gene sequence
          Length = 1459

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  gggcaaagcaggggaccttc 92
           ||||||||||||||||||||
Sbjct: 162 gggcaaagcaggggaccttc 181
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>ref|NM_005598.2| Homo sapiens nescient helix loop helix 1 (NHLH1), mRNA
          Length = 2527

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 623 agcgccggcgccggcgccgcgcca 646
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>gb|M97507.1|HUMHEN1A Homo sapiens helix-loop-helix protein (HEN1) gene, complete cds
          Length = 600

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 392 agcgccggcgccggcgccgcgcca 415
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>gb|M96739.1|HUMNSCL1A Human NSCL-1 mRNA sequence
          Length = 2601

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 agcgccggctccggcgccgcgcca 244
           ||||||||| ||||||||||||||
Sbjct: 638 agcgccggcgccggcgccgcgcca 661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,296,816
Number of Sequences: 3902068
Number of extensions: 3296816
Number of successful extensions: 77124
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76369
Number of HSP's gapped (non-prelim): 748
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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