ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STH_ARATH (Q9SID1) Salt tolerance-like protein 148 6e-36
2STO_ARATH (Q96288) Salt-tolerance protein 147 2e-35
3STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600 117 1e-26
4STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540 95 1e-19
5COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3 70 2e-12
6COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1 65 9e-11
7COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4 65 1e-10
8COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2 62 1e-09
9CONS_ARATH (Q39057) Zinc finger protein CONSTANS 59 5e-09
10COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15 52 1e-06
11COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14 52 1e-06
12COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13 51 1e-06
13COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190 48 1e-05
14COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5 47 2e-05
15COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9 46 4e-05
16COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12 44 2e-04
17COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10 44 2e-04
18COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11 42 6e-04
19COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16 42 6e-04
20COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8 40 0.003
21COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6 39 0.005
22ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog 37 0.020
23COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7 35 0.10
24ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation ... 32 0.65
25YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in ... 32 0.85
26ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation fa... 32 1.1
27METE_SALTY (Q9L6N1) 5-methyltetrahydropteroyltriglutamate--homoc... 31 1.4
28ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation ... 30 2.5
29TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fi... 30 3.2
30TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fi... 30 3.2
31METE_SALTI (Q8Z3B6) 5-methyltetrahydropteroyltriglutamate--homoc... 30 4.2
32ZN687_HUMAN (Q8N1G0) Zinc finger protein 687 29 5.5
33XIS_SACER (P22876) Probable excisionase 28 9.4

>STH_ARATH (Q9SID1) Salt tolerance-like protein|
          Length = 238

 Score =  148 bits (374), Expect = 6e-36
 Identities = 72/110 (65%), Positives = 76/110 (69%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299
           MKIQCD                 LCA+CDVE+HAANKLASKHQRL LD+L  K P CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRVGLGPVS 449
            EKAAFIFCVEDRAL CRDCDE  H P T S NHQR+LATGIRV L   S
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTS 110



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>STO_ARATH (Q96288) Salt-tolerance protein|
          Length = 248

 Score =  147 bits (370), Expect = 2e-35
 Identities = 70/106 (66%), Positives = 77/106 (72%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299
           MKIQCD                 LC +CD+EIHAANKLASKHQRL L++L  K PRCDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRVGL 437
           QEKAAFIFCVEDRAL CRDCDE IHV  + S NHQR+LATGI+V L
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106



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>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600|
          Length = 299

 Score =  117 bits (294), Expect = 1e-26
 Identities = 55/111 (49%), Positives = 67/111 (60%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299
           MKIQC+                 LC  CD +IHAANKLA KHQR+PL A  + +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRVGLGPVST 452
           QE + F FC++DRAL CR CD  IH        HQR+L TGI+VGL  + T
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDT 111



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>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540|
          Length = 331

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL---DALGAKLPRC 290
           MKI+CD                 LC  CD ++H ANKLASKH R  L    +     P C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRV 431
           DICQ+K A +FC +DRA+ C+DCD  IH     +  H R+L TG+++
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKL 107



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>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 36/110 (32%), Positives = 50/110 (45%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311
           CDS                LC  CD +IH ANKLAS+H+R+ L         C++C++  
Sbjct: 8   CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58

Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRVGLGPVSTCAA 461
           A + C  D A  C  CD  IH    LS  H+R   T     +GP  + ++
Sbjct: 59  AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASS 108



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>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 31/92 (33%), Positives = 42/92 (45%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311
           CD+                LC+ CD ++HAAN+LAS+H+R+ +         C  C+   
Sbjct: 12  CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62

Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           A  FC  D A  C  CD  IH    L+  HQR
Sbjct: 63  AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260
           C S                LC  CD EIH+AN LA +HQR+P+
Sbjct: 55  CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97



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>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/96 (33%), Positives = 44/96 (45%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311
           CDS                LC  CD ++HAANKLAS+H R+ +         C++C++  
Sbjct: 6   CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 56

Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLAT 419
           A + C  D A  C  CD  IH    L+  H+R   T
Sbjct: 57  AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92



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>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 32/105 (30%), Positives = 44/105 (41%)
 Frame = +3

Query: 93  QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272
           + ES +S      CD+                LC  CD  +HAAN++AS+H+R+ +    
Sbjct: 3   KEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---- 58

Query: 273 AKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
                C  C+   A   C  D A  C  CD  IH    L+  HQR
Sbjct: 59  -----CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275
           C S                LC  CD EIH+AN LA +HQR+P+  L A
Sbjct: 59  CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA 106



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>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 30/106 (28%), Positives = 47/106 (44%)
 Frame = +3

Query: 90  GQRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDAL 269
           G  E+ ++R     CD+                LC  CD ++H+AN++AS+H+R+ +   
Sbjct: 10  GSGENNRAR----PCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--- 62

Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
                 C+ C+   A   C  D A  C  CD  +H    L+  HQR
Sbjct: 63  ------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260
           C+S                LC  CD E+H+AN LA +HQR+P+
Sbjct: 63  CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105



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>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 27/104 (25%), Positives = 41/104 (39%)
 Frame = +3

Query: 111 SRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRC 290
           S   ++ CD                 LC  CD ++H AN L+ KH R  +         C
Sbjct: 2   SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------C 52

Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLATG 422
           D C  +   + C  D  + C++CD  +H   ++S  H R    G
Sbjct: 53  DNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96



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>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368
           LC  CD  +H+AN L+ KH R  +         CD C ++   + C  D  + C++CD  
Sbjct: 31  LCLPCDQHVHSANLLSRKHVRSQI---------CDNCSKEPVSVRCFTDNLVLCQECDWD 81

Query: 369 IHVPGTLSGNHQRYLATG 422
           +H   + S  H+R    G
Sbjct: 82  VHGSCSSSATHERSAVEG 99



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           C+ C E+ A +FC  D A  C  CD+ +H    LS  H R
Sbjct: 12  CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR 51



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>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 25/81 (30%), Positives = 36/81 (44%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311
           CD                 LC  CD ++H AN+L +KH R  L         CD C E  
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63

Query: 312 AFIFCVEDRALFCRDCDEPIH 374
           + +FC  +R++ C++CD   H
Sbjct: 64  SSLFCETERSVLCQNCDWQHH 84



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYL 413
           CD C    A ++C  D A  C  CD+ +HV   L   H R L
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSL 54



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>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190|
          Length = 356

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368
           LC  CD ++H+AN L+ +H R  L         CD C+ +   + C + +   C  C++ 
Sbjct: 33  LCLTCDAKVHSANSLSGRHLRTVL---------CDSCKNQPCVVRCFDHKMFLCHGCNDK 83

Query: 369 IHVPGTLSGNHQR 407
            H  G  S  H+R
Sbjct: 84  FHGGG--SSEHRR 94



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           C+ C+   A ++C+ D A  C  CD  +H   +LSG H R
Sbjct: 14  CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLR 53



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>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311
           CD+                LC  CD  IH+     ++H+R+ +         C++C++  
Sbjct: 22  CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68

Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           A + C  D A  C  CD  IH    L+  H+R
Sbjct: 69  AAVTCKADAAALCVSCDADIHSANPLASRHER 100



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLD 263
           LC  CD +IH+AN LAS+H+R+P++
Sbjct: 80  LCVSCDADIHSANPLASRHERVPVE 104



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIH 374
           GA    CD C+   A +FC  D A  C  CD  IH
Sbjct: 16  GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIH 50



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>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCD 362
           LC  CD  +H+AN L+ +H R  +         C+ C  + A + CVE+R   C++CD
Sbjct: 24  LCLSCDRSVHSANALSKRHSRTLV---------CERCNAQPATVRCVEERVSLCQNCD 72



 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYL 413
           CD C E+ + ++C  D A  C  CD  +H    LS  H R L
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL 46



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>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299
           M+ +CD                 LC  CDV +H+AN L+ +H R  +         C+ C
Sbjct: 1   MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51

Query: 300 QEKAAFIFCVEDRALFCRDC 359
             + A I C++++  +C+ C
Sbjct: 52  FSQPAAIRCLDEKVSYCQGC 71



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +3

Query: 282 PRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYL 413
           P+CD C    A I+C  D A  C +CD  +H    LS  H R L
Sbjct: 3   PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSL 46



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>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368
           LC  CD  +H+AN L+ +H R  +         C+ C  + A + C ++R   C++CD  
Sbjct: 24  LCLSCDRNVHSANALSKRHSRTLV---------CERCNAQPASVRCSDERVSLCQNCDWS 74

Query: 369 IH--VPGTLSGNHQR 407
            H     T + +H+R
Sbjct: 75  GHDGKNSTTTSHHKR 89



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYL 413
           CD C E+ + ++C  D A  C  CD  +H    LS  H R L
Sbjct: 5   CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL 46



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>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +3

Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299
           M+ +CD                 LC  CDV +H+AN L+ +H R  L         C+ C
Sbjct: 1   MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51

Query: 300 QEKAAFIFCVEDRALFCRDC 359
             +   + C+ +    C+ C
Sbjct: 52  SLQPTAVHCMNENVSLCQGC 71



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +3

Query: 285 RCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYL 413
           RCD C  + A I+C  D A  C +CD  +H    LS  H R L
Sbjct: 4   RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSL 46



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>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 261 DALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           +A+GAK  R CD C ++ A  +C  D A  C+ CD  +H    L+  H+R
Sbjct: 7   NAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHER 56



 Score = 32.7 bits (73), Expect = 0.50
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260
           CDS                LC  CD  +H+AN LA +H+R+ L
Sbjct: 17  CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59



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>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 276 KLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           K PR C++C  K A  +C  D A  C  CDE +H    ++  H+R
Sbjct: 10  KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER 54



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPL 260
           LC  CD  +H+AN +A+KH+R+ L
Sbjct: 34  LCHVCDESVHSANHVATKHERVCL 57



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>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 264 ALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           A+G K  R CD C ++ A  +C  D A  C  CD  +H    L+  H+R
Sbjct: 8   AVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHER 56



 Score = 34.3 bits (77), Expect = 0.17
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275
           CDS                LC  CD  +H+AN LA +H+R+ L +  A
Sbjct: 17  CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASA 64



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>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog|
          Length = 539

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
 Frame = +3

Query: 108 KSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPR 287
           K R + ++CD                 LC RC    H+ N L SKH+R+PL      L  
Sbjct: 100 KERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVH 158

Query: 288 CDICQEKAAFIFCVE-----DRALFCRDC 359
           C +         C E     +  L C  C
Sbjct: 159 CRLHSSYVVEFVCKELSCDTESPLMCMMC 187



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>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 288 CDICQEKA-AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           CD C +++ A  +C  D A  C+ CD  IH    L+  H+R
Sbjct: 22  CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHER 62



 Score = 34.3 bits (77), Expect = 0.17
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 189 LCARCDVEIHAANKLASKHQRLPLDA 266
           LC  CD  IH+AN LA +H+R+ L +
Sbjct: 42  LCQSCDASIHSANHLAKRHERVRLQS 67



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>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (RING finger
           protein 46)
          Length = 574

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305
           I+CD                 LC+ C    H+   LA KH+R+PL     +   C   Q 
Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCSQHQV 183

Query: 306 KAAFIFCVED----RALFCRDCDE 365
            A    C+E+      L C  C E
Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207



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>YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in chromosome II|
          Length = 250

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 6/95 (6%)
 Frame = +3

Query: 93  QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272
           ++  KK R     CD                 LC  C   IH+ + LA   +++      
Sbjct: 93  EKNEKKERNKNGVCDENTNHHASNYCETCDADLCEECWTWIHSISTLAHHEKKM------ 146

Query: 273 AKLPRCDICQEKAAFIFCVEDRA------LFCRDC 359
              P C     K+  + C+ DR       L C +C
Sbjct: 147 ISTPDCQFHPGKSISLVCMRDRCKKRQNRLMCSEC 181



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>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (Fragment)
          Length = 554

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305
           I+CD                 LC+ C    H+   LA KH+R+PL     +   C   Q 
Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 163

Query: 306 KAAFIFCVEDRA----LFCRDCDE 365
            A    C+E+      L C  C E
Sbjct: 164 HAIEFVCLEEACQTSPLMCCVCKE 187



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>METE_SALTY (Q9L6N1) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 753

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = +3

Query: 213 IHAANKLASKHQRLPLDAL-------GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPI 371
           IH  + +A  HQRLP+D L       G  + R D+ ++ A     V  RAL+       +
Sbjct: 266 IHGKDDVAELHQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLL 325

Query: 372 HVPGTLS 392
           H P  LS
Sbjct: 326 HSPIDLS 332



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>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23)
          Length = 574

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305
           I+CD                 LC+ C    H+   LA KH+R+PL     +   C   Q 
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 183

Query: 306 KAAFIFCVED----RALFCRDCDE 365
            A    C+E+      L C  C E
Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207



 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLSGNHQR 407
           G  + RCD  +   A ++C       C DC +  H   TL+  H+R
Sbjct: 121 GESIIRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRR 165



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>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLAT 419
           C +C+     A   C E RA FC +C +  H  GT    H+  L T
Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217



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>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLSGNHQRYLAT 419
           C +C+     A   C E RA FC +C +  H  GT    H+  L T
Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217



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>METE_SALTI (Q8Z3B6) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 753

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = +3

Query: 213 IHAANKLASKHQRLPLDAL-------GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPI 371
           IH  + +   HQRLP+D L       G  + R D+ ++ A     V  RAL+       +
Sbjct: 266 IHGKDDVVELHQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLL 325

Query: 372 HVPGTLS 392
           H P  LS
Sbjct: 326 HSPIDLS 332



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>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687|
          Length = 1237

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 327  VEDRALFCRDCDEPIHVPGTLSGNHQRYLATGIRVGLGPVSTCAAGD 467
            VED A  C DC      PG+LS    R+++   R G+G  S    GD
Sbjct: 1130 VEDGAQQCLDCGLCFASPGSLS--RHRFISHKKRRGVGKASALGLGD 1174



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>XIS_SACER (P22876) Probable excisionase|
          Length = 98

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
 Frame = -1

Query: 365 LVAVAAEERPVLDAEDEGG--------LLLADVAARELGAERVEREPLVLAGEL 228
           L A+ AE++P  + E E          LL  + AA++LG  R +   LV +GE+
Sbjct: 15  LAALLAEQQPAPEPEPEPAARRLPNRVLLTVEEAAKQLGLGRTKTYALVASGEI 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.128    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,168,731
Number of Sequences: 219361
Number of extensions: 519303
Number of successful extensions: 1489
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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