>HYPA_STRAW (Q820F2) Probable hydrogenase nickel incorporation protein hypA|
          Length = 131

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = -3

Query: 245 AGAVGPRVRQCVLDAHAGPAGDRATGCAEEVAHRARPAPQCRPYLHRVRPPVVACPEAVG 66
           AG V   +  C   A AG   + A    EEV  RAR AP  R +   + PP ++CPE  G
Sbjct: 38  AGVVPDSLSFCFELACAGTVLEGADLVTEEVPGRARCAPCAREWSVGM-PPRLSCPECGG 96

Query: 65  VDWD 54
              D
Sbjct: 97  ARVD 100

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 1/94 (1%)
 Frame = -3

Query: 299 PRAGHGVEQRGGALTQQRAGAVGPRVRQCVLDAHAGPAGDRATGCAEEVAHRARPAPQCR 120
           PRAG    +RG     +RAGA  P        A   P     T CA     R  P P   
Sbjct: 152 PRAG----RRG-----RRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTP--- 199

Query: 119 PYLHRVRPPVVACPEAVGVDWDERRR-CHRPVAA 21
                   P  A P A       RRR C  P  A
Sbjct: 200 -------APTCASPSAAASSCCRRRRACSSPTTA 226

>LBXCO_MOUSE (Q8BX46) Ladybird homeobox corepressor 1 (Transcriptional|
           corepressor Corl1)
          Length = 964

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
 Frame = -3

Query: 305 GEPRAGHGVEQRGGALTQQRAGAVGPRVRQCVLDAHAGPA------GDRATGCAEEVAHR 144
           GEP+ G G    GGA T   AGA GP        A  GP       G + +G A++ A  
Sbjct: 415 GEPKGGPGTGSSGGAGT--AAGAGGPGAGHLPPGAGPGPGGGTMFWGHQPSGAAKDAAAV 472

Query: 143 ARPAPQCRPY 114
           A  A     Y
Sbjct: 473 AAAAAAATVY 482

>LBXCO_RAT (P84551) Ladybird homeobox corepressor 1|
          Length = 964

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
 Frame = -3

Query: 305 GEPRAGHGVEQRGGALTQQRAGAVGPRVRQCVLDAHAGPA------GDRATGCAEEVAHR 144
           GEP+ G G    GGA T   AGA GP        A  GP       G + +G A++ A  
Sbjct: 415 GEPKGGPGTGSGGGAGT--AAGAGGPGAGHLPPGAGPGPGGGTMFWGHQPSGAAKDAAAV 472

Query: 143 ARPAPQCRPY 114
           A  A     Y
Sbjct: 473 AAAAAAATVY 482

>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = -3

Query: 311 GVGEPRAGHGVEQRGGALTQQRAGAVGPRVRQCVLDAHAGPA------GDRATGCAEEVA 150
           G GEP+ G G    GG       GA GP        A AGP       G + +G A++ A
Sbjct: 415 GAGEPKGGPGTGSGGGG-AGTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAA 473

Query: 149 HRARPAPQCRPY 114
             A  A     Y
Sbjct: 474 AVAAAAAAATVY 485

>GATA3_XENLA (P23773) GATA-binding factor 3 (Transcription factor xGATA-3)|
          Length = 435

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 15  SHSSHGSVTPTPLIPVDPNSLGTCDYWRTHPMQIWSALG 131
           SHSSH   TPTP+ P  P+SL    +   HP  + +A+G
Sbjct: 402 SHSSHMLTTPTPMHP--PSSL---SFGPHHPSSMVTAMG 435

>GATA3_CHICK (P23825) GATA-binding factor 3 (GATA-3) (Transcription factor|
           NF-E1C)
          Length = 444

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 15  SHSSHGSVTPTPLIPVDPNSLGTCDYWRTHPMQIWSALG 131
           SHSSH   TPTP+ P  P+SL    +   HP  + +A+G
Sbjct: 411 SHSSHMLTTPTPMHP--PSSL---SFGPHHPSSMVTAMG 444

>GATA3_HUMAN (P23771) Trans-acting T-cell-specific transcription factor GATA-3|
           (GATA-binding factor 3)
          Length = 443

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 15  SHSSHGSVTPTPLIPVDPNSLGTCDYWRTHPMQIWSALG 131
           SHSSH   TPTP+ P  P+SL    +   HP  + +A+G
Sbjct: 410 SHSSHMLTTPTPMHP--PSSL---SFGPHHPSSMVTAMG 443

>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor|
           (EGF-like domain-containing protein 3) (Multiple
           EGF-like domain protein 3)
          Length = 1229

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = -3

Query: 293 AGHGVEQRGGALTQQRAGAVGPRVRQCVLDAHAGPAGDRATGCAEEVA 150
           AGHG       L    AG VGPR  Q     H GP  ++   C    A
Sbjct: 772 AGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRCQCQHGAA 819

>FZD8_XENLA (O93274) Frizzled 8 precursor (Frizzled-8) (Fz-8) (Xfz8)|
          Length = 581

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -3

Query: 140 RPAPQCRPYLHRVRPPVVACPEAVGVDWDERRRCHR 33
           +P P CR    R R          G  W +R RC R
Sbjct: 95  KPLPPCRSVCERARAGCAPLMRQYGFAWPDRMRCDR 130

>SLT11_SCHPO (O59800) Pre-mRNA-splicing factor slt11 (Complexed with cdc5|
           protein 5) (Cell cycle control protein cwf5)
          Length = 354

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 157 KWLTELGQLPSADHICIGC 101
           +W+ E GQ P    IC+GC
Sbjct: 55  RWIKERGQKPGKTQICVGC 73

>GATA3_MOUSE (P23772) Trans-acting T-cell-specific transcription factor GATA-3|
           (GATA-binding factor 3)
          Length = 443

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 15  SHSSHGSVTPTPLIPVDPNSLGTCDYWRTHPMQIWSALG 131
           SHSSH   TPTP+ P    S G       HP  + +A+G
Sbjct: 410 SHSSHMLTTPTPMHPPSGLSFGP-----HHPSSMVTAMG 443

>ANLN_HUMAN (Q9NQW6) Actin-binding protein anillin|
          Length = 1124

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = -3

Query: 179 RATGCAEEVAHRARPAPQCRPYLHRVRPPVVACPEAVGVDWDERRRCHRPVAAVRRCS 6
           R      ++A R   AP+   +  R R P+        +   E + C +P  + +RCS
Sbjct: 15  RRENLQRKMAERPTAAPRSMTHAKRARQPLSEASNQQPLSGGEEKSCTKPSPSKKRCS 72

>PYR1_YEAST (P07259) Protein URA1 [Includes: Glutamine-dependent|
            carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
            carbamoyltransferase (EC 2.1.3.2)]
          Length = 2214

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +2

Query: 11   TVAQQPRVCDTDAAHPSRPQQPRDMRLLEDAPDADMVGTGELAEL 145
            ++ ++    + DAA  + P+QP + +L+   P  ++V  G +  L
Sbjct: 1857 SITEEAIADNLDAAEDAIPEQPLEQKLMSSRPPRELVAPGAIQNL 1901

>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
 Frame = -3

Query: 290 GHGVEQRGGALTQQRAGAVGP---------RVRQCVLDAHAGPAGDRATGCAEEVAHRAR 138
           GHG  + G   +++  G  GP          +      A A P G RA+     V+  AR
Sbjct: 76  GHGASRPG---SRRLLGVCGPPRPFVVVLLALAPAATPARACPPGVRASPPRSGVSSSAR 132

Query: 137 PAPQC-RPYLHRVRPPV 90
           PAP C RP    V  P+
Sbjct: 133 PAPGCPRPACEPVYGPL 149

>SFRP5_HUMAN (Q5T4F7) Secreted frizzled-related protein 5 precursor (sFRP-5)|
           (Secreted apoptosis-related protein 3) (SARP-3)
           (Frizzled-related protein 1b) (FRP-1b)
          Length = 317

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -3

Query: 140 RPAPQCRPYLHRVRPPVVACPEAVGVDWDERRRCHR 33
           RP   CR     VR       EA G  W E   CH+
Sbjct: 119 RPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHK 154

>SFRP5_BOVIN (Q9XSC1) Secreted frizzled-related protein 5 precursor (sFRP-5)|
          Length = 315

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -3

Query: 140 RPAPQCRPYLHRVRPPVVACPEAVGVDWDERRRCHR 33
           RP   CR     VR       EA G  W E   CH+
Sbjct: 117 RPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHK 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,866,241
Number of Sequences: 219361
Number of extensions: 781577
Number of successful extensions: 3036
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)