ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo... 37 0.029
2FOG1_XENLA (Q9I9K0) Zinc finger protein FOG (Friend of GATA) (xF... 35 0.085
3CCG8_HUMAN (Q8WXS5) Voltage-dependent calcium channel gamma-8 su... 35 0.14
4CT075_HUMAN (Q8WUT4) Protein C20orf75 precursor 33 0.32
5CCG8_MOUSE (Q8VHW2) Voltage-dependent calcium channel gamma-8 su... 33 0.55
6CCG8_RAT (Q8VHW5) Voltage-dependent calcium channel gamma-8 subu... 33 0.55
7TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni... 32 0.94
8PACC_YEAST (P33400) pH-response transcription factor pacC/RIM101... 32 0.94
9ANLN_DROME (Q9V4P1) Actin-binding protein anillin (Actin-binding... 32 1.2
10PDXA2_BRAJA (Q89MT9) 4-hydroxythreonine-4-phosphate dehydrogenas... 31 2.1
11CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calc... 30 3.6
12CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Ca... 30 3.6
13CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Ca... 30 3.6
14TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TR... 30 4.7
15POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP123... 29 6.1
16SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 29 6.1
17SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1... 29 6.1
18LCMT2_MOUSE (Q8BYR1) Leucine carboxyl methyltransferase 2 (EC 2.... 29 6.1
19SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1 29 6.1
20OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinas... 29 7.9
21IF2_STRAW (Q82K53) Translation initiation factor IF-2 29 7.9
22IF2_SYNEL (Q8DK04) Translation initiation factor IF-2 29 7.9
23UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E... 29 7.9
24RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 ... 29 7.9
25SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) ... 29 7.9
26SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ... 29 7.9
27SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 29 7.9
28MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-pro... 29 7.9

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
           (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 32/90 (35%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = +3

Query: 234 AAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWP--- 404
           AA    P   S++ PP S FSSA  P     AS P  H    S PPS     S++ P   
Sbjct: 593 AAATSTPVSSSQSAPPMSPFSSASKP----AASGPLSHPTPLSAPPSSVPLKSSVLPSPS 648

Query: 405 GRCRSSRRHIRPVAVAPSVSIGPCSAWPHS 494
           GR         P  V  S  I P +A P S
Sbjct: 649 GRSAQGSSSPVPSMVQKSPRITPPAAKPGS 678



 Score = 28.9 bits (63), Expect = 7.9
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +3

Query: 234  AAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPGR- 410
            AA+   P+ +  +QP    FSS          S P+   I  S PPS   SAS   PG  
Sbjct: 1238 AAQGATPSTKESSQPDA--FSSGG-------GSKPSYEAIPESSPPSGITSASNTTPGEP 1288

Query: 411  CRSSRRHIRPVAVAPSVS 464
              SS R + P   A S +
Sbjct: 1289 AASSSRPVAPSGTALSTT 1306



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>FOG1_XENLA (Q9I9K0) Zinc finger protein FOG (Friend of GATA) (xFOG) (Fragment)|
          Length = 1061

 Score = 35.4 bits (80), Expect = 0.085
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +3

Query: 234 AAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRI--TRSLPPS----WQASASA 395
           A++ D P +R E   PG  +++ P PR  +       H +  T S PPS     +  A A
Sbjct: 653 ASRHDPPLRRREVNKPGPPYTTQPTPRTRKRRKLYEIHGVAPTESTPPSPHTLGRVEAMA 712

Query: 396 LWPGRCRSSRRHIRPVAVAPSVSIGP 473
           L PG        + P  V PS S  P
Sbjct: 713 LMPG--------LIPAPVMPSPSSSP 730



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>CCG8_HUMAN (Q8WXS5) Voltage-dependent calcium channel gamma-8 subunit|
           (Neuronal voltage-gated calcium channel gamma-8 subunit)
          Length = 425

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -2

Query: 337 GDDATRARRGSGAEEKKDPGG 275
           GDD T  R G GA EKKDPGG
Sbjct: 61  GDDGTPHRGGGGASEKKDPGG 81



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>CT075_HUMAN (Q8WUT4) Protein C20orf75 precursor|
          Length = 740

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +3

Query: 255 AQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCRSSRRHI 434
           A  + TQ  G       L      AS+P   ++    P SW  S S+  PG+    R H 
Sbjct: 450 ASTTRTQHRGEHAPELVLEPDISAASTPLASKLLGPFPTSWDRSISSPQPGQ----RTHA 505

Query: 435 RPVAVAPSVSIG 470
            P A  PS+S G
Sbjct: 506 TPQAPNPSLSEG 517



 Score = 28.9 bits (63), Expect = 7.9
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = +3

Query: 249 APAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCRSSRR 428
           APA  S     G F +S  L +   V  S     +  S PP +  S  A       S+  
Sbjct: 340 APAAGSS----GPFSASLSLSQLPGVCQSDQSTTLGASHPPCFNRSTYAQGTTVAPSAAP 395

Query: 429 HIRP------VAVAPSVSIGPCSAWPHS 494
             RP      V+ AP+V     +AWPHS
Sbjct: 396 ATRPAGDQQSVSKAPNVGSRTIAAWPHS 423



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>CCG8_MOUSE (Q8VHW2) Voltage-dependent calcium channel gamma-8 subunit|
           (Neuronal voltage-gated calcium channel gamma-8 subunit)
          Length = 423

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -2

Query: 337 GDDATRARRGSGAEEKKDPGG 275
           GDD    R GSG+ EKKDPGG
Sbjct: 60  GDDGPPHRGGSGSSEKKDPGG 80



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>CCG8_RAT (Q8VHW5) Voltage-dependent calcium channel gamma-8 subunit|
           (Neuronal voltage-gated calcium channel gamma-8 subunit)
          Length = 421

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -2

Query: 337 GDDATRARRGSGAEEKKDPGG 275
           GDD    R GSG+ EKKDPGG
Sbjct: 60  GDDGPPHRGGSGSSEKKDPGG 80



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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 32.0 bits (71), Expect = 0.94
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 252 PAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPG 407
           PA +    P GS  S AP+P  A VA+ P P     + P    A A+   PG
Sbjct: 122 PAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPG 173



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>PACC_YEAST (P33400) pH-response transcription factor pacC/RIM101 (pH-response|
           regulator protein RIM101) (Regulator of IME2 protein 1)
          Length = 625

 Score = 32.0 bits (71), Expect = 0.94
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 321 RVASSPTPHRITRSLPPSWQASASALWPGRCRSSRRHIRPVAVAPSVSIGPCSAWP 488
           R+A  PT   +T  LPP    +A  ++  + + +  H   V  APS S   CS  P
Sbjct: 446 RLAKYPTGPSLTEHLPPLHSNTAGGVFNRQSQYAMPHYPSVRAAPSYSSSGCSILP 501



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>ANLN_DROME (Q9V4P1) Actin-binding protein anillin (Actin-binding protein 8)|
           (ABP8)
          Length = 1239

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/97 (23%), Positives = 37/97 (38%)
 Frame = +3

Query: 138 DETXXXXXXXXXXXXXXMEDRDRSR*FDAPWQAAKRDAPAQRSETQPPGSFFSSAPLPRR 317
           D+               ++D DR R  D    + + +   +  + QP  S  ++   P  
Sbjct: 451 DKVAALVANAQSSAETRIKDIDRQRQEDMQIISNRFNKQKELFDNQPSDSSVAAQARP-- 508

Query: 318 ARVASSPTPHRITRSLPPSWQASASALWPGRCRSSRR 428
                +P P R+ R +PP      +AL PG   S RR
Sbjct: 509 ----PAPAPSRVVRPMPPPPPPPIAALSPGLASSKRR 541



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>PDXA2_BRAJA (Q89MT9) 4-hydroxythreonine-4-phosphate dehydrogenase 2 (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase
           2)
          Length = 345

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 185 SDGGPRSITLVRCSVASGQEGRSGAAVRNPAARILLF 295
           +   P ++  +R +VA  + GR+GA V NP A+ +L+
Sbjct: 103 ASSAPAALASIRQAVADVRAGRAGAVVTNPIAKSVLY 139



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>CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calcium-regulated|
           heat-stable protein of 24 kDa) (CRHSP-24)
          Length = 147

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 300 APLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCR 416
           +P P R  V  SP P R TR+   + +AS   ++ G C+
Sbjct: 30  SPSPLRGNVVPSPLPTRRTRTFSATVRASQGPVYKGVCK 68



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>CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Calcium-regulated|
           heat-stable protein of 24 kDa) (CRHSP-24)
          Length = 147

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 300 APLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCR 416
           +P P R  V  SP P R TR+   + +AS   ++ G C+
Sbjct: 30  SPSPLRGNVVPSPLPTRRTRTFSATVRASQGPVYKGVCK 68



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>CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Calcium-regulated|
           heat-stable protein of 24 kDa) (CRHSP-24)
          Length = 148

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 300 APLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCR 416
           +P P R  V  SP P R TR+   + +AS   ++ G C+
Sbjct: 31  SPSPLRGNVVPSPLPTRRTRTFSATVRASQGPVYKGVCK 69



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>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +3

Query: 234 AAKRDAPAQRSETQPPGSFFSSAP---LPRRARVASSPTPHRITRSLPPSWQASASAL-W 401
           ++   A A  S T PPG+           RR+R ASSP+P R +R    S    +S   W
Sbjct: 203 SSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFDW 262

Query: 402 PGR 410
             R
Sbjct: 263 AAR 265



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>POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
 Frame = +3

Query: 270  TQPPGSFFSSAPLPRRARVASSPTPH-------RITRSLPPSWQASASALWPGRCRSSRR 428
            T+PP    +  P PR+ R  S+  PH       R+   LP  W+     +  G     RR
Sbjct: 1771 TEPPSEPEAPIPAPRKRRTTSTTPPHNPGDFVPRVPVELP--WEPEDLDIQFGDLEPRRR 1828

Query: 429  HIRPVAVAPSVSIG 470
            + R   V+  +  G
Sbjct: 1829 NTRDWDVSTGIQFG 1842



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 222 APWQAAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALW 401
           +P    +R +P+ R  + P    +S +P P+R R AS P P +   S  P  +   S   
Sbjct: 574 SPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR-RTASPPPPPKRRASPSPQSKRRVSHSP 632

Query: 402 PGRCRSS 422
           P + RSS
Sbjct: 633 PPKQRSS 639



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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 252 PAQR--SETQPPGSFFSSAPLPRRARVASSPTP-HRITRSLPPSWQAS 386
           P QR  S + PP    +S P P + R + SP P  R++ S PP  ++S
Sbjct: 599 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS 646



 Score = 29.3 bits (64), Expect = 6.1
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +3

Query: 225 PWQAAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTP--HRITRSLPPSWQASASAL 398
           P    +R +P+ R  + P    +S +P P+R R AS P P   R + S PP  + S S  
Sbjct: 582 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR-RTASPPPPPKRRASPSPPPKRRVSHSP- 639

Query: 399 WPGRCRSS 422
            P + RSS
Sbjct: 640 -PPKQRSS 646



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>LCMT2_MOUSE (Q8BYR1) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)|
           (p21WAF1/CIP1 promoter-interacting protein)
          Length = 686

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 238 PRGTLRRSGPKPSRPDPSFLPHRCRAAHGW 327
           PRG  RR+G   S  D S L  R  AAHG+
Sbjct: 3   PRGRQRRAGTVQSTNDSSSLSKRSLAAHGY 32



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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 252 PAQR--SETQPPGSFFSSAPLPRRARVASSPTP-HRITRSLPPSWQAS 386
           P QR  S + PP    +S P P + R + SP P  R++ S PP  ++S
Sbjct: 613 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS 660



 Score = 29.3 bits (64), Expect = 6.1
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +3

Query: 225 PWQAAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTP--HRITRSLPPSWQASASAL 398
           P    +R +P+ R  + P    +S +P P+R R AS P P   R + S PP  + S S  
Sbjct: 596 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR-RTASPPPPPKRRASPSPPPKRRVSHSP- 653

Query: 399 WPGRCRSS 422
            P + RSS
Sbjct: 654 -PPKQRSS 660



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>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)|
            (Obscurin-MLCK) (Obscurin-RhoGEF)
          Length = 7968

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = +1

Query: 175  GRPQRWRTEIDHVSSMLRGKRPRGTLRRSGPKPSRPDPSFLPHRCRAAHGWHHPRPPTAS 354
            G  +R +  ++H+S +L+G RP G L + G  P R  P     R      W   R PT  
Sbjct: 7413 GLRERVKASVEHISRILKG-RPEG-LEKEG--PPRKKPGLASFRLSGLKSW--DRAPTFL 7466

Query: 355  RD 360
            R+
Sbjct: 7467 RE 7468



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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 234 AAKRDAPAQRSETQP--PGSFFSSAPLPRRARVASSPTPHRITR--SLPPSWQASASALW 401
           AA+R A A+R    P  PG      P PR A  A +P     T   S P +  A+AS   
Sbjct: 91  AAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPR 150

Query: 402 PG 407
           PG
Sbjct: 151 PG 152



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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 234 AAKRDAPAQRSETQPPGSFFSSAPLPRR-----ARVASSPTPHRITRSLPPSWQASASAL 398
           AAK  AP  + E  PP    +  P P R      +VA++P P +  +  P   + + +A 
Sbjct: 134 AAKPPAPPAKPEPTPPRPVPTLVPPPTRPTKKEEKVAATPPPRKELKEPPKKEKGAIAAA 193

Query: 399 WPG---RCRSSRRHIRPVAVAP 455
            P    R    +R + P    P
Sbjct: 194 KPSSQDRIEIVQRAVPPAPAKP 215



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>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/62 (33%), Positives = 25/62 (40%)
 Frame = +3

Query: 243 RDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCRSS 422
           R  P  RS +QP      SAP P  AR    P P       P +W+ S     PG    +
Sbjct: 107 RPQPRARSRSQPG----LSAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRPQT 162

Query: 423 RR 428
           RR
Sbjct: 163 RR 164



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>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (hCOP1)
          Length = 731

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +3

Query: 279 PGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQASASALWPGRCRSSRRH------IRP 440
           PGS  +S+     + ++SSP+P        PS   SA+AL  G    +         +RP
Sbjct: 16  PGSSAASSVTSASSSLSSSPSP--------PSVAVSAAALVSGGVAQAAGSGGLGGPVRP 67

Query: 441 VAVAPSVS 464
           V VAP+VS
Sbjct: 68  VLVAPAVS 75



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>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus)
           (Mammalian branch point-binding protein mBBP) (BBP)
           (CW17)
          Length = 653

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 225 PWQAAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPP-SWQASASALW 401
           PWQ  ++  P       P  S  SS PLP +    ++ T    T S+PP   Q +A+A  
Sbjct: 499 PWQQQQQQPPPP---PPPSSSMASSTPLPWQQNTTTTTTSAG-TGSIPPWQQQQAAAAAS 554

Query: 402 PG 407
           PG
Sbjct: 555 PG 556



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>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 225 PWQAAKRDAPAQRSETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPP-SWQASASALW 401
           PWQ  ++  P       P  S  SS PLP +    ++ T    T S+PP   Q +A+A  
Sbjct: 499 PWQQQQQQPPPP---PPPSSSMASSTPLPWQQNTTTTTTSAG-TGSIPPWQQQQAAAAAS 554

Query: 402 PG 407
           PG
Sbjct: 555 PG 556



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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +3

Query: 252 PAQR--SETQPPGSFFSSAPLPRRARVASSPTPHRITRSLPPSWQAS 386
           P QR  S + PP    +S P P + R + SP P R     PP  Q S
Sbjct: 618 PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 664



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>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1 (EC|
            2.7.11.1) (Syntrophin-associated serine/threonine-protein
            kinase)
          Length = 1570

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +1

Query: 184  QRWRTEIDHVSSMLRGKRPRGTLRRSGPKPSRPDPSFLPHRCRAAHGWHHPRPPTA 351
            +RW  E+    + L G R +    +  P+P    PS  P +C A      P PP +
Sbjct: 1478 ERWVLEVVEERTTLSGPRSKPASPKLSPEPQ--TPSLAPAKCSAPSSAVTPVPPAS 1531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,190,534
Number of Sequences: 219361
Number of extensions: 1232941
Number of successful extensions: 4373
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4334
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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