ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLXB2_HUMAN (O15031) Plexin-B2 precursor (MM1) 33 0.39
2FHAB_BORPE (P12255) Filamentous hemagglutinin 32 1.1
3RL22_DROME (P50887) 60S ribosomal protein L22 30 3.3
4CYAA_AERHY (Q59119) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos... 29 5.6
5ACES_CULPI (Q86GC8) Acetylcholinesterase precursor (EC 3.1.1.7) ... 29 7.3
6ACES_CULTO (Q86GC9) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fr... 29 7.3
7ACES_CULQU (Q867X2) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fr... 29 7.3
8ACES_CULPP (Q867X3) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fr... 29 7.3
9ACES_ANOGA (Q869C3) Acetylcholinesterase precursor (EC 3.1.1.7) ... 28 9.6

>PLXB2_HUMAN (O15031) Plexin-B2 precursor (MM1)|
          Length = 1838

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = -3

Query: 348 PLMKVALKVEAAYPNPGARNAAYVSEKVTTPSLSPPKNAACFCSAVMPQATESLPCADAW 169
           PL KV  K+EA       RNA Y   +        P +    C    P +++S PC    
Sbjct: 315 PLDKVHAKMEAN------RNACYTGTREARDIFYKPFHGDIQCGGHAPGSSKSFPCGSEH 368

Query: 168 LPWSMGN 148
           LP+ +G+
Sbjct: 369 LPYPLGS 375



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>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -3

Query: 357  PRTPLMKVAL----KVEAAYPNPGARNAAYVSEKVTTPSLSPPKNAACFCSAVMPQATES 190
            P+  + KV +    KVE A P P       V+EKVTTP++ P          V P+ T+ 
Sbjct: 3348 PKVEVAKVEVVPRPKVETAQPLPPR---PVVAEKVTTPAVQPQLAKVETVQPVKPETTKP 3404

Query: 189  LP 184
            LP
Sbjct: 3405 LP 3406



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>RL22_DROME (P50887) 60S ribosomal protein L22|
          Length = 299

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/63 (28%), Positives = 23/63 (36%)
 Frame = -3

Query: 360 GPRTPLMKVALKVEAAYPNPGARNAAYVSEKVTTPSLSPPKNAACFCSAVMPQATESLPC 181
           G + P      K   A   P    AA   +  +TP+ +PP   A    A  P A    P 
Sbjct: 90  GKKAPAAAAPKKDAKAAAAPAPAKAAPAKKAASTPAAAPPAKKAAPAKAAAPAAAAPAPA 149

Query: 180 ADA 172
           A A
Sbjct: 150 AAA 152



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>CYAA_AERHY (Q59119) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
           (Adenylyl cyclase)
          Length = 843

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 308 GYAASTLSATFINGVLGPQTRPENETARYSIYIENIHK 421
           GY +  +S  + NG+L PQ+R         ++I+N+H+
Sbjct: 487 GYISKLVSWAYFNGLLTPQSRVHLFNQGSDLHIDNLHQ 524



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>ACES_CULPI (Q86GC8) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 702

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 366 VWGPRTPLMKVALKVEAAYPNPGARNAA 283
           +W P TPL +  L +    P P  +NAA
Sbjct: 211 MWNPNTPLSEDCLYINVVVPRPRPKNAA 238



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>ACES_CULTO (Q86GC9) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fragment)|
          Length = 132

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 366 VWGPRTPLMKVALKVEAAYPNPGARNAA 283
           +W P TPL +  L +    P P  +NAA
Sbjct: 61  MWNPNTPLSEDCLYINVVVPRPRPKNAA 88



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>ACES_CULQU (Q867X2) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fragment)|
          Length = 132

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 366 VWGPRTPLMKVALKVEAAYPNPGARNAA 283
           +W P TPL +  L +    P P  +NAA
Sbjct: 61  MWNPNTPLSEDCLYINVVVPRPRPKNAA 88



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>ACES_CULPP (Q867X3) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fragment)|
          Length = 132

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 366 VWGPRTPLMKVALKVEAAYPNPGARNAA 283
           +W P TPL +  L +    P P  +NAA
Sbjct: 61  MWNPNTPLSEDCLYINVVVPRPRPKNAA 88



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>ACES_ANOGA (Q869C3) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 737

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 366 VWGPRTPLMKVALKVEAAYPNPGARNAA 283
           +W P TPL +  L +    P P  +NAA
Sbjct: 244 MWNPNTPLSEDCLYINVVAPRPRPKNAA 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,389,174
Number of Sequences: 219361
Number of extensions: 987169
Number of successful extensions: 3382
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3381
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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