ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast63a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LIMK1_CHICK (Q8QFP8) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) ... 31 2.4

>LIMK1_CHICK (Q8QFP8) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (chLIMK1)|
          Length = 662

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 37  AD*DYIVRRRGFDGDVQGFPPRVCSPAC 120
           AD DY+ R   F  +V+GF  R C PAC
Sbjct: 555 ADPDYLPRTTDFGLNVRGFLERYCPPAC 582


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,431,126
Number of Sequences: 219361
Number of extensions: 665853
Number of successful extensions: 2149
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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