ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast63a03 |
|---|---|
| Clone Library Name | barley_pub |
>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex I subunit) Length = 738 Score = 251 bits (640), Expect = 1e-66 Identities = 118/158 (74%), Positives = 138/158 (87%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAA 182 MMALKD +NKMGS+ + CEGNG +P AD+RS Y+MNTSI+GLEKAD FLLVGTQPRVEAA Sbjct: 387 MMALKDLLNKMGSNNIFCEGNGMHPNADLRSGYIMNTSISGLEKADAFLLVGTQPRVEAA 446 Query: 183 MVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNP 362 MVNARI KTV+AT AKVGY+GP ADFNYD +HLGT P+TLVEIAEGRHPF S LK+AKNP Sbjct: 447 MVNARIHKTVKATNAKVGYVGPAADFNYDHEHLGTDPQTLVEIAEGRHPFSSALKNAKNP 506 Query: 363 VIIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWNGL 476 VII GAG+F+R+D+ AVF+ ++T+AK NV RPDWNGL Sbjct: 507 VIIVGAGVFDRDDKDAVFAAVDTIAKNNNVVRPDWNGL 544
>NUAM_ARATH (Q9FGI6) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) (75 kDa mitochondrial complex I subunit) Length = 748 Score = 236 bits (602), Expect = 3e-62 Identities = 112/158 (70%), Positives = 132/158 (83%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAA 182 MM LKDFVN+MGSD V CEG AD+R +YLMNTSI+GLE AD+FLL+GTQPRVEAA Sbjct: 393 MMVLKDFVNRMGSDNVWCEGTAAGVDADLRYSYLMNTSISGLENADLFLLIGTQPRVEAA 452 Query: 183 MVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNP 362 MVNARI KTVRA+ AKVGY+GP A+FNYD +HLGTGP+TL EIAEGRHPFC+ LK+AKNP Sbjct: 453 MVNARICKTVRASNAKVGYVGPPAEFNYDCKHLGTGPDTLKEIAEGRHPFCTALKNAKNP 512 Query: 363 VIIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWNGL 476 II GAGLF R D+ A+ S++E++A+ NV RPDWNGL Sbjct: 513 AIIVGAGLFNRTDKNAILSSVESIAQANNVVRPDWNGL 550
>NUAM_MOUSE (Q91VD9) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 139 bits (350), Expect = 4e-33 Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 2/153 (1%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPA--DIRSNYLMNTSIAGLEKADVFLLVGTQPRVE 176 ++ALKD +NK+ SD + E P A D+RSNYL+NT+IAG+E+ADV LLVGT PR E Sbjct: 351 LVALKDLLNKVDSDNLCTEEIFPTEGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFE 410 Query: 177 AAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAK 356 A + NARI+K+ KV IG D Y HLG P+ L +IA GRH FC +LK AK Sbjct: 411 APLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGRHSFCEVLKDAK 470 Query: 357 NPVIIAGAGLFEREDQGAVFSTIETVAKKFNVT 455 P+++ G+ +R+D A+ + + + +K VT Sbjct: 471 KPMVVLGSSALQRDDGAAILAAVSNMVQKIRVT 503
>NUAM_HUMAN (P28331) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 135 bits (341), Expect = 5e-32 Identities = 68/153 (44%), Positives = 97/153 (63%), Gaps = 2/153 (1%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPA--DIRSNYLMNTSIAGLEKADVFLLVGTQPRVE 176 ++ALKD +N++ SD + E P A D+RSNYL+NT+IAG+E+ADV LLVGT PR E Sbjct: 351 LVALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFE 410 Query: 177 AAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAK 356 A + NARI+K+ KV IG D Y HLG P+ L +IA G HPF +LK AK Sbjct: 411 APLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAK 470 Query: 357 NPVIIAGAGLFEREDQGAVFSTIETVAKKFNVT 455 P+++ G+ +R D A+ + + ++A+K +T Sbjct: 471 KPMVVLGSSALQRNDGAAILAAVSSIAQKIRMT 503
>NUAM_PONPY (Q5R911) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 134 bits (338), Expect = 1e-31 Identities = 68/153 (44%), Positives = 96/153 (62%), Gaps = 2/153 (1%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPA--DIRSNYLMNTSIAGLEKADVFLLVGTQPRVE 176 ++ALKD +N++ SD + E P A D+RSNYL+NT+IAG+E+ADV LLVGT PR E Sbjct: 351 LVALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFE 410 Query: 177 AAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAK 356 A + NARI+K+ KV IG D Y HLG P+ L +IA G HPF +LK AK Sbjct: 411 APLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAK 470 Query: 357 NPVIIAGAGLFEREDQGAVFSTIETVAKKFNVT 455 P+++ G+ +R D A+ + ++A+K +T Sbjct: 471 KPMVVLGSSALQRNDGAAILAAFSSIAQKIRMT 503
>NUAM_BOVIN (P15690) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 727 Score = 132 bits (331), Expect = 7e-31 Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 2/153 (1%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPA--DIRSNYLMNTSIAGLEKADVFLLVGTQPRVE 176 ++ALKD +N++ SD + E P A D+RSNYL+NT+IAG+E+ADV LLVGT PR E Sbjct: 351 LIALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFE 410 Query: 177 AAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAK 356 A + NARI+K+ KV IG D Y HLG P+ L +IA G HPF +L+ AK Sbjct: 411 APLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLQEAK 470 Query: 357 NPVIIAGAGLFEREDQGAVFSTIETVAKKFNVT 455 P++I G+ +R D A+ + + +A+K + Sbjct: 471 KPMVILGSSALQRNDGAAILAAVSNIAQKIRTS 503
>NUAM_DROME (Q94511) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 731 Score = 128 bits (322), Expect = 7e-30 Identities = 65/155 (41%), Positives = 95/155 (61%) Frame = +3 Query: 6 MALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAM 185 +ALKD +N++GS+ V E D R+NYL+N++IAGLE+AD LLVGT PR EA + Sbjct: 365 VALKDLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLEEADAVLLVGTNPRYEAPL 424 Query: 186 VNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNPV 365 VN R++K + ++ IGP D +YD ++LG + ++ G H F +L+ AK P Sbjct: 425 VNTRLRKAYVHNELQIASIGPKIDLSYDHENLGADAALVKDVCSGAHAFSKVLEGAKKPA 484 Query: 366 IIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWN 470 II GA L ER D A+ +T+ KK + +P+WN Sbjct: 485 IIIGADLLERADGAAIHATVAEYCKK--LKKPNWN 517
>NUAM_RECAM (O21241) NADH-ubiquinone oxidoreductase 75 kDa subunit (EC 1.6.5.3)| (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (NADH dehydrogenase subunit 11) Length = 691 Score = 118 bits (296), Expect = 8e-27 Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 13/170 (7%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPP-------------ADIRSNYLMNTSIAGLEKADV 143 ++ K+ +NK+GS K+ E + P AD R+NY+ NT +A +E++D+ Sbjct: 321 ILLFKELLNKLGSSKIYLESSTPILQLNDDEKEDQILNNADFRNNYISNTPLAKIEESDL 380 Query: 144 FLLVGTQPRVEAAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGR 323 LL+GT R+EA ++N RI+K V +GP + Y+T++LG TL+EI+EGR Sbjct: 381 CLLIGTNIRLEAPLLNTRIRKRYLQGNYSVYSVGPTNNLTYNTENLGNDISTLLEISEGR 440 Query: 324 HPFCSILKSAKNPVIIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWNG 473 HPFC L +K P+II G + +R D ++ ++T+ K + +WNG Sbjct: 441 HPFCKKLMKSKKPLIIIGTHVLQRTDGTSIIELVKTLFKYTQIKTSNWNG 490
>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-78KD) (CI-78KD) Length = 744 Score = 114 bits (286), Expect = 1e-25 Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 6/163 (3%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPP----ADIRSNYLMNTSIAGLEKADVFLLVGTQPR 170 ++A+KD N++GS+ + + + P D+RSNY+ N+SI G+E ADV LLVGT PR Sbjct: 358 LVAMKDLANRLGSENLALDMPSGHKPLAHGVDVRSNYIFNSSIVGIESADVILLVGTNPR 417 Query: 171 VEAAMVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKS 350 EAA++NARI+K + ++G +G D ++ +HLGT L + EG F L+S Sbjct: 418 HEAAVLNARIRKQWLRSDLEIGVVGQTWDSTFEFEHLGTDHAALQKALEG--DFGKKLQS 475 Query: 351 AKNPVIIAGAGLFEREDQGAVFSTIETV--AKKFNVTRPDWNG 473 AKNP+II G+G+ + D A + T+ + N +WNG Sbjct: 476 AKNPMIIVGSGVTDHGDANAFYETVGKFVDSNASNFLTEEWNG 518
>NUOG_RICCN (Q92G92) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 676 Score = 110 bits (274), Expect = 3e-24 Identities = 62/157 (39%), Positives = 87/157 (55%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAA 182 M LK + K+GS+ R NYL NT+IAG+EKAD+ LL+G PR A Sbjct: 325 MFMLKTLLQKLGSNNYSVNQFDYKLDTMQRGNYLFNTTIAGIEKADLCLLIGANPRQIAP 384 Query: 183 MVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNP 362 ++N+RI VRA KV IG + Y Q LG+ + + E+A G H F LK+AK Sbjct: 385 VLNSRIGMRVRADSLKVARIGGGHNQTYKIQDLGSDIKIIEELAIGTHEFTKALKAAKYL 444 Query: 363 VIIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWNG 473 +II G G++ R+D A+ S I + ++N+ R DW G Sbjct: 445 MIIVGDGVYARDDGYAILSLIHKIVTEYNIMRDDWKG 481
>NUOG_RICPR (Q9ZCF6) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 675 Score = 103 bits (257), Expect = 3e-22 Identities = 60/157 (38%), Positives = 83/157 (52%) Frame = +3 Query: 3 MMALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAA 182 M LK + K+GS+ R NYL NT+I G+EKAD+ LL+G R A Sbjct: 320 MFMLKILLQKLGSNNYTVNQFNYKIDTSERGNYLFNTTIVGVEKADLCLLIGANTRQIAP 379 Query: 183 MVNARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNP 362 ++N+RI + VR KV IG + Y Q LG + + ++A G H + K AK P Sbjct: 380 ILNSRIGRRVRIGALKVVRIGIGHNQTYKIQDLGNDIKIIEDLAIGTHEYTKAFKEAKYP 439 Query: 363 VIIAGAGLFEREDQGAVFSTIETVAKKFNVTRPDWNG 473 +II G G++ R+D AV S I V K+N+ R DW G Sbjct: 440 MIIVGDGVYGRDDGYAVLSLIHKVVDKYNMMRDDWQG 476
>NQO3_PARDE (P29915) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain 3) (NDH-1, chain 3) Length = 672 Score = 73.2 bits (178), Expect = 4e-13 Identities = 50/147 (34%), Positives = 73/147 (49%) Frame = +3 Query: 9 ALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAMV 188 +LK V +G KV C +G PA RS Y+ I ++ A++ L+GT PR EA ++ Sbjct: 330 SLKQLVEGLGG-KVECRVDGARLPAGNRSAYVGTARIEDIDDAEMIQLIGTNPRDEAPVL 388 Query: 189 NARIQKTVRATQAKVGYIGPLADFNYDTQHLGTGPETLVEIAEGRHPFCSILKSAKNPVI 368 NARI+K + AKVG +G D YD H+GT L ++ S A+ ++ Sbjct: 389 NARIRK-AWSKGAKVGLVGEPVDLTYDYAHVGTDRAALESLSSRE---ISDETKARPSIV 444 Query: 369 IAGAGLFEREDQGAVFSTIETVAKKFN 449 I G G R D AV + +A+ N Sbjct: 445 IVGQGAIARRDGEAVLAHAMKLAENSN 471
>NUAM_ACACA (Q37373) NADH-ubiquinone oxidoreductase 75 kDa subunit (EC 1.6.5.3)| (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (NADH dehydrogenase subunit 11) Length = 675 Score = 58.2 bits (139), Expect = 1e-08 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 4/135 (2%) Frame = +3 Query: 84 DIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIQKTVRATQAKVGYIGPLADFN 263 D+ + Y NT + L++ D +L+ RVE +VN+RI++ V V +G ++FN Sbjct: 351 DLTALYSFNTPLTRLDEGDFCILLDVNLRVELPIVNSRIKQLVSKKMLPVFVLGFYSNFN 410 Query: 264 YDTQHLGTGPETLVEIAEGRHPFCSIL--KSAKNPVIIAGAGLFEREDQGAVF--STIET 431 Y +H+ +TL+ + EG H + + K + P+ + G D ++ S I Sbjct: 411 YFVKHISNSSKTLLHVLEGSHWLSAKISKKFSSKPIFLIG-------DSSSLLKGSLIVP 463 Query: 432 VAKKFNVTRPDWNGL 476 + NV +WNGL Sbjct: 464 LFNFTNVICDNWNGL 478
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 29.6 bits (65), Expect = 4.7 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +3 Query: 9 ALKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKA-DVFLLVGTQPRVEAAM 185 A ++ + MGS+ V C G A I +N L+ S+ G +A ++ + +G P++ A + Sbjct: 184 AAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243 Query: 186 VN 191 +N Sbjct: 244 LN 245
>BOS1_YEAST (P25385) Vesicular transport protein BOS1| Length = 244 Score = 29.6 bits (65), Expect = 4.7 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Frame = +3 Query: 87 IRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIQKTVRATQAKVGYIGPLADFNY 266 ++ + +A EK V + Q + A +V+ ++KTV+ Y L + Sbjct: 9 VKQKNQLQQELARFEKNSVTAPISLQGSISATLVS--LEKTVKQ------YAEHLNRYKE 60 Query: 267 DTQHLGTGPE---TLVEIAEGRHPFCSILKSAKNP-------VIIAGAGLFEREDQGAVF 416 DT P+ L + + H F + K K + G+G D F Sbjct: 61 DTNAEEIDPKFANRLATLTQDLHDFTAKFKDLKQSYNENNSRTQLFGSGASHVMDSDNPF 120 Query: 417 STIETVAKKFNVTRPDWNG 473 ST ET+ K NV NG Sbjct: 121 STSETIMNKRNVGGASANG 139
>METK_DEIRA (Q9RWM6) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 408 Score = 29.3 bits (64), Expect = 6.2 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 10/145 (6%) Frame = +3 Query: 12 LKDFVNKMGSDKVLCEGNGPNPPADIRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAMVN 191 L DF+ SD +L E P + + L+ T +A +V + R A V+ Sbjct: 23 LSDFI----SDSILDEFLRQEPTSRVAVETLVTTGMA---------VVAGEVRAHTAHVD 69 Query: 192 ARIQKTVRATQAKVGYIGPLADFNYDTQH---LGTGPETLVEIAEG-------RHPFCSI 341 IQKTVR +VGY A++ +D ++ L E EIA G R + Sbjct: 70 --IQKTVREAVQRVGY--TRANYGFDAEYSAVLVAIHEQSPEIASGVDHSEEWREMSEAE 125 Query: 342 LKSAKNPVIIAGAGLFEREDQGAVF 416 + +N + GAG DQG +F Sbjct: 126 RQKPENAYSMVGAG-----DQGLMF 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,292,338 Number of Sequences: 219361 Number of extensions: 1429379 Number of successful extensions: 3511 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3506 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
