ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197203.1| Oryza sativa (japonica cultivar-group) unknown ... 230 3e-57
2gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 230 3e-57
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
4dbj|AK103175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 230 3e-57
6gb|AY104334.1| Zea mays PCO098024 mRNA sequence 190 3e-45
7dbj|AB071281.2| Methanosarcina mazei ack gene for acetate kinase... 50 0.006
8gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 50 0.006
9gb|U04001.1|SIU04001 Simian immunodeficiency virus SIVagmTAN40 e... 44 0.40
10gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 6.2
11gb|DQ247769.1| Homo sapiens peroxiredoxin 5 (PRDX5) gene, comple... 40 6.2
12gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.2
13gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 6.2
14gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete... 40 6.2
15gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome... 40 6.2
16gb|BC072659.1| Mus musculus cDNA clone IMAGE:30360087, partial cds 40 6.2
17gb|AF414358.1|AF414356S3 Mus musculus thioredoxin reductase (Trx... 40 6.2
18gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, com... 40 6.2
19gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 6.2
20gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome... 40 6.2
21gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete... 40 6.2
22gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, comple... 40 6.2
23gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, compl... 40 6.2
24gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184... 40 6.2
25emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chro... 40 6.2
26emb|AL589943.26| Human DNA sequence from clone RP11-44D23 on chr... 40 6.2
27gb|AC163739.2| Pan troglodytes BAC clone CH251-503F22 from chrom... 40 6.2
28ref|NM_135576.1| Drosophila melanogaster CG18302-RA (CG18302), mRNA 40 6.2
29gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 6.2
30ref|XM_696676.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.2
31gb|AF211347.1|AF211347 Mus musculus coagulation factor X gene, c... 40 6.2
32ref|NM_001014815.1| Danio rerio zgc:110542 (zgc:110542), mRNA 40 6.2
33gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosom... 40 6.2
34gb|BC091985.1| Danio rerio zgc:110542, mRNA (cDNA clone MGC:1105... 40 6.2
35gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complet... 40 6.2
36gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, comple... 40 6.2
37gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 6.2
38gb|AF085811.1|AF085811 Mus musculus factor VII gene, partial seq... 40 6.2
39gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38... 40 6.2
40dbj|AP003774.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.2
41dbj|AP001453.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.2
42gb|AC083892.19| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 6.2
43gb|AC005111.1|AC005111 Drosophila melanogaster DNA sequence (P1 ... 40 6.2
44emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chr... 40 6.2
45emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chr... 40 6.2 
>ref|NM_197203.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0078O01.8), mRNA
          Length = 1619

 Score =  230 bits (116), Expect = 3e-57
 Identities = 272/324 (83%)
 Strand = Plus / Plus

                                                                       
Query: 4   ctgtgcatctcttgggttatggaaacattgcatacaagattgctgaagctagcgatgctc 63
           |||||||||| ||||| |||||||| |||||||||| | |    ||||||||| | |   
Sbjct: 572 ctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaa 631

                                                                       
Query: 64  gtaagaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctg 123
           |||| ||||| ||||| ||||||||||||||||||||| | || | ||| || ||||  |
Sbjct: 632 gtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttgg 691

                                                                       
Query: 124 aggcatgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatg 183
           | |  ||| ||| |||||| |||||||  || |||||||||||||| |||||| ||  ||
Sbjct: 692 atgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattg 751

                                                                       
Query: 184 agttgggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttct 243
           ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 752 agttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttct 811

                                                                       
Query: 244 ttgtcattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaag 303
           | || |||||||| |||||||| ||||||||| |||  |||||||||||||| |||||||
Sbjct: 812 tcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaag 871

                                   
Query: 304 aagcatcttcagaagagtcaaatg 327
           ||||||||||||| ||||| ||||
Sbjct: 872 aagcatcttcagaggagtcgaatg 895



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                        
Query: 339  gacaaaagtcaagctatcatgactggttccccaacaggtacctcaggcaatcttcaagtc 398
            ||||| || ||||||||||| || |||||||| |||||||| |||  |||||||||||| 
Sbjct: 916  gacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagtt 975

                                                                        
Query: 399  agccccttgtccagcaagtctatgaggagagagctgaggaagcagaagcgacttgctgct 458
             ||| ||| |||| ||| ||||||||||| ||| || | ||||||||||| |||||||||
Sbjct: 976  ggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgct 1035

              
Query: 459  ga 460
            ||
Sbjct: 1036 ga 1037
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score =  230 bits (116), Expect = 3e-57
 Identities = 272/324 (83%)
 Strand = Plus / Plus

                                                                         
Query: 4     ctgtgcatctcttgggttatggaaacattgcatacaagattgctgaagctagcgatgctc 63
             |||||||||| ||||| |||||||| |||||||||| | |    ||||||||| | |   
Sbjct: 80895 ctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaa 80954

                                                                         
Query: 64    gtaagaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctg 123
             |||| ||||| ||||| ||||||||||||||||||||| | || | ||| || ||||  |
Sbjct: 80955 gtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttgg 81014

                                                                         
Query: 124   aggcatgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatg 183
             | |  ||| ||| |||||| |||||||  || |||||||||||||| |||||| ||  ||
Sbjct: 81015 atgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattg 81074

                                                                         
Query: 184   agttgggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttct 243
             ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 81075 agttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttct 81134

                                                                         
Query: 244   ttgtcattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaag 303
             | || |||||||| |||||||| ||||||||| |||  |||||||||||||| |||||||
Sbjct: 81135 tcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaag 81194

                                     
Query: 304   aagcatcttcagaagagtcaaatg 327
             ||||||||||||| ||||| ||||
Sbjct: 81195 aagcatcttcagaggagtcgaatg 81218



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                         
Query: 339   gacaaaagtcaagctatcatgactggttccccaacaggtacctcaggcaatcttcaagtc 398
             ||||| || ||||||||||| || |||||||| |||||||| |||  |||||||||||| 
Sbjct: 81239 gacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagtt 81298

                                                                         
Query: 399   agccccttgtccagcaagtctatgaggagagagctgaggaagcagaagcgacttgctgct 458
              ||| ||| |||| ||| ||||||||||| ||| || | ||||||||||| |||||||||
Sbjct: 81299 ggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgct 81358

               
Query: 459   ga 460
             ||
Sbjct: 81359 ga 81360
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  230 bits (116), Expect = 3e-57
 Identities = 272/324 (83%)
 Strand = Plus / Plus

                                                                            
Query: 4        ctgtgcatctcttgggttatggaaacattgcatacaagattgctgaagctagcgatgctc 63
                |||||||||| ||||| |||||||| |||||||||| | |    ||||||||| | |   
Sbjct: 18577484 ctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaa 18577543

                                                                            
Query: 64       gtaagaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctg 123
                |||| ||||| ||||| ||||||||||||||||||||| | || | ||| || ||||  |
Sbjct: 18577544 gtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttgg 18577603

                                                                            
Query: 124      aggcatgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatg 183
                | |  ||| ||| |||||| |||||||  || |||||||||||||| |||||| ||  ||
Sbjct: 18577604 atgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattg 18577663

                                                                            
Query: 184      agttgggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttct 243
                ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 18577664 agttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttct 18577723

                                                                            
Query: 244      ttgtcattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaag 303
                | || |||||||| |||||||| ||||||||| |||  |||||||||||||| |||||||
Sbjct: 18577724 tcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaag 18577783

                                        
Query: 304      aagcatcttcagaagagtcaaatg 327
                ||||||||||||| ||||| ||||
Sbjct: 18577784 aagcatcttcagaggagtcgaatg 18577807



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                            
Query: 339      gacaaaagtcaagctatcatgactggttccccaacaggtacctcaggcaatcttcaagtc 398
                ||||| || ||||||||||| || |||||||| |||||||| |||  |||||||||||| 
Sbjct: 18577828 gacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagtt 18577887

                                                                            
Query: 399      agccccttgtccagcaagtctatgaggagagagctgaggaagcagaagcgacttgctgct 458
                 ||| ||| |||| ||| ||||||||||| ||| || | ||||||||||| |||||||||
Sbjct: 18577888 ggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgct 18577947

                  
Query: 459      ga 460
                ||
Sbjct: 18577948 ga 18577949
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>dbj|AK103175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121H10, full
            insert sequence
          Length = 2376

 Score =  230 bits (116), Expect = 3e-57
 Identities = 272/324 (83%)
 Strand = Plus / Plus

                                                                        
Query: 4    ctgtgcatctcttgggttatggaaacattgcatacaagattgctgaagctagcgatgctc 63
            |||||||||| ||||| |||||||| |||||||||| | |    ||||||||| | |   
Sbjct: 1012 ctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaa 1071

                                                                        
Query: 64   gtaagaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctg 123
            |||| ||||| ||||| ||||||||||||||||||||| | || | ||| || ||||  |
Sbjct: 1072 gtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttgg 1131

                                                                        
Query: 124  aggcatgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatg 183
            | |  ||| ||| |||||| |||||||  || |||||||||||||| |||||| ||  ||
Sbjct: 1132 atgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattg 1191

                                                                        
Query: 184  agttgggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttct 243
            ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 1192 agttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttct 1251

                                                                        
Query: 244  ttgtcattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaag 303
            | || |||||||| |||||||| ||||||||| |||  |||||||||||||| |||||||
Sbjct: 1252 tcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaag 1311

                                    
Query: 304  aagcatcttcagaagagtcaaatg 327
            ||||||||||||| ||||| ||||
Sbjct: 1312 aagcatcttcagaggagtcgaatg 1335



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                        
Query: 339  gacaaaagtcaagctatcatgactggttccccaacaggtacctcaggcaatcttcaagtc 398
            ||||| || ||||||||||| || |||||||| |||||||| |||  |||||||||||| 
Sbjct: 1356 gacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagtt 1415

                                                                        
Query: 399  agccccttgtccagcaagtctatgaggagagagctgaggaagcagaagcgacttgctgct 458
             ||| ||| |||| ||| ||||||||||| ||| || | ||||||||||| |||||||||
Sbjct: 1416 ggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgct 1475

              
Query: 459  ga 460
            ||
Sbjct: 1476 ga 1477
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  230 bits (116), Expect = 3e-57
 Identities = 272/324 (83%)
 Strand = Plus / Plus

                                                                            
Query: 4        ctgtgcatctcttgggttatggaaacattgcatacaagattgctgaagctagcgatgctc 63
                |||||||||| ||||| |||||||| |||||||||| | |    ||||||||| | |   
Sbjct: 18587937 ctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaa 18587996

                                                                            
Query: 64       gtaagaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctg 123
                |||| ||||| ||||| ||||||||||||||||||||| | || | ||| || ||||  |
Sbjct: 18587997 gtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttgg 18588056

                                                                            
Query: 124      aggcatgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatg 183
                | |  ||| ||| |||||| |||||||  || |||||||||||||| |||||| ||  ||
Sbjct: 18588057 atgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattg 18588116

                                                                            
Query: 184      agttgggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttct 243
                ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 18588117 agttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttct 18588176

                                                                            
Query: 244      ttgtcattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaag 303
                | || |||||||| |||||||| ||||||||| |||  |||||||||||||| |||||||
Sbjct: 18588177 tcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaag 18588236

                                        
Query: 304      aagcatcttcagaagagtcaaatg 327
                ||||||||||||| ||||| ||||
Sbjct: 18588237 aagcatcttcagaggagtcgaatg 18588260



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                            
Query: 339      gacaaaagtcaagctatcatgactggttccccaacaggtacctcaggcaatcttcaagtc 398
                ||||| || ||||||||||| || |||||||| |||||||| |||  |||||||||||| 
Sbjct: 18588281 gacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagtt 18588340

                                                                            
Query: 399      agccccttgtccagcaagtctatgaggagagagctgaggaagcagaagcgacttgctgct 458
                 ||| ||| |||| ||| ||||||||||| ||| || | ||||||||||| |||||||||
Sbjct: 18588341 ggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgct 18588400

                  
Query: 459      ga 460
                ||
Sbjct: 18588401 ga 18588402
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>gb|AY104334.1| Zea mays PCO098024 mRNA sequence
          Length = 1749

 Score =  190 bits (96), Expect = 3e-45
 Identities = 218/258 (84%), Gaps = 3/258 (1%)
 Strand = Plus / Plus

                                                                       
Query: 68  gaagatcagcaaaatctggtgtgcttgggtaggagaagaagcctcacagggctctgaggc 127
           |||||| ||||| ||||||||||||||||||||| |||    ||| || || | ||||  
Sbjct: 602 gaagataagcaagatctggtgtgcttgggtaggacaagg---ctcccatggttttgagag 658

                                                                       
Query: 128 atgtaacatctatgaacaatctggtttcgccattgtcaacttttcttatgcatatgagtt 187
            |||||||  ||||| |||||||| || ||||| |||||||| |||||| | ||||| ||
Sbjct: 659 ttgtaacacttatgagcaatctggatttgccatagtcaacttctcttatacctatgattt 718

                                                                       
Query: 188 gggaaggaagtggccttctgaagatcaggaccttcccatctctgctggatctttctttgt 247
            || ||||||||| ||||||| || || |||||| |  ||||||||||||||||||||||
Sbjct: 719 aggtaggaagtggtcttctgaggaacaagacctttctgtctctgctggatctttctttgt 778

                                                                       
Query: 248 cattgatgaggctggacatcgtggaaagcgaatgaagaagtcattttctgatcaagaagc 307
            |||||||| |||||||| ||||||||||||||||  || ||||| ||||||||||||||
Sbjct: 779 aattgatgatgctggacaccgtggaaagcgaatgagaaaatcattctctgatcaagaagc 838

                             
Query: 308 atcttcagaagagtcaaa 325
           ||||||||||||||||||
Sbjct: 839 atcttcagaagagtcaaa 856



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 423 aggagagagctgaggaagcagaagcga 449
           ||||||||| |||||||||||||||||
Sbjct: 963 aggagagagttgaggaagcagaagcga 989
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>dbj|AB071281.2| Methanosarcina mazei ack gene for acetate kinase, complete cds
          Length = 1836

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 23 tggaaacattgcatacaagattgct 47
          |||||||||||||||||||||||||
Sbjct: 69 tggaaacattgcatacaagattgct 93
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 23     tggaaacattgcatacaagattgct 47
              |||||||||||||||||||||||||
Sbjct: 617659 tggaaacattgcatacaagattgct 617635
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>gb|U04001.1|SIU04001 Simian immunodeficiency virus SIVagmTAN40 envelope protein gene,
           partial cds
          Length = 1119

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 173 ttatgcatatgagttgggaagg 194
           ||||||||||||||||||||||
Sbjct: 831 ttatgcatatgagttgggaagg 852
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 120    tctgaggcatgtaacatctatgaa 143
              |||||||||||||||||| |||||
Sbjct: 924387 tctgaggcatgtaacatcaatgaa 924410
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>gb|DQ247769.1| Homo sapiens peroxiredoxin 5 (PRDX5) gene, complete cds
          Length = 7637

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccttctgaagatcaggacct 220
            ||||||||||||||||||||
Sbjct: 3739 ccttctgaagatcaggacct 3758
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 23      tggaaacattgcatacaagattgc 46
               ||||||||| ||||||||||||||
Sbjct: 2276158 tggaaacatagcatacaagattgc 2276135
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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   agagctgaggaagcagaagc 447
             ||||||||||||||||||||
Sbjct: 39028 agagctgaggaagcagaagc 39047
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>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence
          Length = 179428

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ttcgccattgtcaacttttc 172
             ||||||||||||||||||||
Sbjct: 52954 ttcgccattgtcaacttttc 52973
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>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence
          Length = 158788

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ggctgtgcatctcttgggtt 21
              ||||||||||||||||||||
Sbjct: 142586 ggctgtgcatctcttgggtt 142567
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>gb|BC072659.1| Mus musculus cDNA clone IMAGE:30360087, partial cds
          Length = 2596

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 425  gagagagctgaggaagcagaagcg 448
            |||||||||||||| |||||||||
Sbjct: 2392 gagagagctgaggaggcagaagcg 2369
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>gb|AF414358.1|AF414356S3 Mus musculus thioredoxin reductase (Trxr2) gene, exons 6 through 11
          Length = 22333

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   agagctgaggaagcagaagc 447
             ||||||||||||||||||||
Sbjct: 16604 agagctgaggaagcagaagc 16623
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>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence
          Length = 224119

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   gagagagctgaggaagcagaagcg 448
             |||||||||||||| |||||||||
Sbjct: 60440 gagagagctgaggaggcagaagcg 60417
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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   agagctgaggaagcagaagc 447
             ||||||||||||||||||||
Sbjct: 25614 agagctgaggaagcagaagc 25633
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>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence
          Length = 186595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   agcaagtctatgaggagaga 430
             ||||||||||||||||||||
Sbjct: 74241 agcaagtctatgaggagaga 74260
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>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence
          Length = 224674

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 425    gagagagctgaggaagcagaagcg 448
              |||||||||||||| |||||||||
Sbjct: 117574 gagagagctgaggaggcagaagcg 117551
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>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence
          Length = 211878

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    tcagaagagtcaaatggcca 331
              ||||||||||||||||||||
Sbjct: 165755 tcagaagagtcaaatggcca 165774
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>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence
          Length = 172114

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ggctgtgcatctcttgggtt 21
             ||||||||||||||||||||
Sbjct: 52890 ggctgtgcatctcttgggtt 52871
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>gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184c17 map 16, complete
            sequence
          Length = 146040

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  agagctgaggaagcagaagc 447
            ||||||||||||||||||||
Sbjct: 7071 agagctgaggaagcagaagc 7052
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>emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chromosome X, complete
             sequence
          Length = 110403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 281   gaagaagtcattttctgatcaagaagca 308
             ||||||||||| ||||||| ||||||||
Sbjct: 30018 gaagaagtcatcttctgatgaagaagca 29991
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>emb|AL589943.26| Human DNA sequence from clone RP11-44D23 on chromosome 10, complete
             sequence
          Length = 139325

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaaatctggtgtgcttgggt 97
             ||||||||||||||||||||
Sbjct: 41109 aaaatctggtgtgcttgggt 41090
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>gb|AC163739.2| Pan troglodytes BAC clone CH251-503F22 from chromosome unknown,
            complete sequence
          Length = 220347

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ccttctgaagatcaggacct 220
            ||||||||||||||||||||
Sbjct: 2548 ccttctgaagatcaggacct 2567
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>ref|NM_135576.1| Drosophila melanogaster CG18302-RA (CG18302), mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  ttcgccattgtcaacttttc 172
            ||||||||||||||||||||
Sbjct: 1215 ttcgccattgtcaacttttc 1196
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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   agagctgaggaagcagaagc 447
             ||||||||||||||||||||
Sbjct: 27331 agagctgaggaagcagaagc 27350
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>ref|XM_696676.1| PREDICTED: Danio rerio hypothetical protein LOC555106 (LOC555106),
           mRNA
          Length = 1600

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 aatgaagaagtcattttctgatca 301
           |||||||| |||||||||||||||
Sbjct: 852 aatgaagaggtcattttctgatca 875
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>gb|AF211347.1|AF211347 Mus musculus coagulation factor X gene, complete cds
          Length = 20130

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 tcagaagagtcaaatggcca 331
           ||||||||||||||||||||
Sbjct: 176 tcagaagagtcaaatggcca 195
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>ref|NM_001014815.1| Danio rerio zgc:110542 (zgc:110542), mRNA
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 aatgaagaagtcattttctgatca 301
           |||||||| |||||||||||||||
Sbjct: 858 aatgaagaggtcattttctgatca 881
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>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete sequence
          Length = 215073

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    agcaagtctatgaggagaga 430
              ||||||||||||||||||||
Sbjct: 138482 agcaagtctatgaggagaga 138501
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>gb|BC091985.1| Danio rerio zgc:110542, mRNA (cDNA clone MGC:110542 IMAGE:7148853),
           complete cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 aatgaagaagtcattttctgatca 301
           |||||||| |||||||||||||||
Sbjct: 858 aatgaagaggtcattttctgatca 881
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>gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complete sequence
          Length = 178320

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 281    gaagaagtcattttctgatcaagaagca 308
              ||||||||||| ||||||| ||||||||
Sbjct: 167702 gaagaagtcatcttctgatgaagaagca 167729
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>gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, complete sequence
          Length = 160193

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    accttcccatctctgctgga 236
              ||||||||||||||||||||
Sbjct: 112150 accttcccatctctgctgga 112131
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   agagctgaggaagcagaagc 447
             ||||||||||||||||||||
Sbjct: 35086 agagctgaggaagcagaagc 35067
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>gb|AF085811.1|AF085811 Mus musculus factor VII gene, partial sequence, and factor X gene,
            partial cds
          Length = 2471

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  tcagaagagtcaaatggcca 331
            ||||||||||||||||||||
Sbjct: 1647 tcagaagagtcaaatggcca 1666
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>gb|AE003629.2| Drosophila melanogaster chromosome 2L, section 38 of 83 of the complete
             sequence
          Length = 261176

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ttcgccattgtcaacttttc 172
             ||||||||||||||||||||
Sbjct: 29382 ttcgccattgtcaacttttc 29363
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>dbj|AP003774.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-147G6, complete
           sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ccttctgaagatcaggacct 220
           ||||||||||||||||||||
Sbjct: 883 ccttctgaagatcaggacct 902
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>dbj|AP001453.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-783K16, complete
             sequence
          Length = 166356

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ccttctgaagatcaggacct 220
             ||||||||||||||||||||
Sbjct: 92064 ccttctgaagatcaggacct 92083
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>gb|AC083892.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-116m12, complete
              sequence
          Length = 190588

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 221    tcccatctctgctggatctttctt 244
              |||||| |||||||||||||||||
Sbjct: 141366 tcccatgtctgctggatctttctt 141343
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>gb|AC005111.1|AC005111 Drosophila melanogaster DNA sequence (P1 DS01895 (D306)), complete
             sequence
          Length = 75551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ttcgccattgtcaacttttc 172
             ||||||||||||||||||||
Sbjct: 72395 ttcgccattgtcaacttttc 72414
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>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete
              sequence
          Length = 215752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    gagagctgaggaagcagaag 446
              ||||||||||||||||||||
Sbjct: 154344 gagagctgaggaagcagaag 154363
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>emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chromosome X, complete
             sequence
          Length = 93337

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   gcaagtctatgaggagagag 431
             ||||||||||||||||||||
Sbjct: 55126 gcaagtctatgaggagagag 55107


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,733,373
Number of Sequences: 3902068
Number of extensions: 4733373
Number of successful extensions: 90650
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90479
Number of HSP's gapped (non-prelim): 171
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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