>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 390

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
 Frame = -2

Query: 289 APTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPE--AMTGTAQMSAISVTH---- 128
           AP   A+A +R  P R      A  AH      A+ TP     TGTA+  A  +      
Sbjct: 161 APAPSAAAPARAVPSRTVAPAAAPAAH------AHHTPAHPTTTGTAKRKAYKLVAIGTS 214

Query: 127 -----AVMLLLTAMAGGSPSPLPLSQTVPA 53
                A+  +LT +    P+PL L Q +PA
Sbjct: 215 TGGPVALQRVLTQLPANFPAPLVLIQHMPA 244

>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate|
           methylesterase 2 (EC 3.1.1.61)
          Length = 387

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
 Frame = -2

Query: 289 APTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMT--GTAQMSAISVTH---- 128
           APT  + A +  + P  A   R +   ++P A A+  P   T  GT +  A  +      
Sbjct: 152 APTSSSRAPAPTTAPARAVPTRTAAPATAPAAHAHHAPAHPTTSGTPKRKAYKLVAIGTS 211

Query: 127 -----AVMLLLTAMAGGSPSPLPLSQTVPA 53
                A+  +LT +    P+PL L Q +PA
Sbjct: 212 TGGPVALQRVLTQLPASFPAPLVLIQHMPA 241

>CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-glutamate|
           methylesterase 3 (EC 3.1.1.61)
          Length = 386

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
 Frame = -2

Query: 289 APTKPASAASRMSP-PRMATGQRASRAHSSP*ADANQTPEAMT--GTAQMSAISVTH--- 128
           AP+  +S AS  +P P  A   R +   ++P A  +  P   T  GTA+  A  +     
Sbjct: 150 APSTLSSRASAPAPAPARAVPSRTATPAAAPAAPTSHAPAHPTTSGTAKRKAYKLVAIGT 209

Query: 127 ------AVMLLLTAMAGGSPSPLPLSQTVPA 53
                 A+  +LT +    P+PL L Q +PA
Sbjct: 210 STGGPVALQRVLTQLPANFPAPLVLIQHMPA 240

>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248|
           antigen)
          Length = 765

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
 Frame = -2

Query: 277 PASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTG-------TAQMSAISVTHAVM 119
           P  + S + PP + T  R+S  H +P   ANQ P   +        T Q S+IS TH+  
Sbjct: 591 PQLSVSALQPP-LPTNSRSS-VHETPVPAANQPPAFPSSPLPPQRPTNQTSSISPTHSYS 648

Query: 118 LLLTAMAGGSPSP--LPLSQTVPA 53
                   G PSP  +P   +VP+
Sbjct: 649 RAPLVPREGVPSPKSVPQLPSVPS 672

>EMSY_HUMAN (Q7Z589) Protein EMSY|
          Length = 1322

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = -2

Query: 268 AASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTGTAQMSAISVTHAVMLLLTAMAGGS 89
           A++   PP + T  ++S   +S    ++ TP  +  T  ++A+  +   +++ T   G S
Sbjct: 313 ASTTQKPPVVITASQSSLVSNSSSGSSSSTPSPIPNTVAVTAVVSSTPSVVMSTVAQGVS 372

Query: 88  PSPLPLSQT 62
            S + ++ T
Sbjct: 373 TSAIKMAST 381

>FTSK_RHIME (Q92L89) DNA translocase ftsK|
          Length = 881

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 289 APTKPA--SAASRMSPPRMATGQRASR 215
           AP KPA   A SR++PPR   GQR  R
Sbjct: 338 APPKPALAMAGSRVAPPRPKAGQRVER 364

>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
 Frame = -2

Query: 289  APTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTGTAQMSAIS---VTHAVM 119
            AP  PA+     +P   A   +   A S     A  +P A T TA ++A +   +T A  
Sbjct: 750  APVAPAAVVPPAAPVSPAAAVQIPAAASL--TPATVSPTAATATAAVAAATTAAITAAAA 807

Query: 118  LLLTAM--AGGSPSPLPLSQTVPALCCAVCS 32
               TA+  A  + +P+P   ++PA   A  S
Sbjct: 808  AATTAIQVAPATSAPVPSPASIPAPATAQAS 838

>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 21/78 (26%), Positives = 30/78 (38%)
 Frame = -2

Query: 286 PTKPASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTGTAQMSAISVTHAVMLLLT 107
           P+ P +  S + P    T    +   S P      +P   T T      S T A     T
Sbjct: 29  PSGPGTTPSPV-PTTSTTSAPTTSTTSGP--GTTPSPVPTTSTTSAPTTSTTSASTASTT 85

Query: 106 AMAGGSPSPLPLSQTVPA 53
           +  G +PSP+P + T  A
Sbjct: 86  SGPGTTPSPVPTTSTTSA 103

>CLPS_RALSO (Q8XWK9) ATP-dependent Clp protease adaptor protein clpS|
          Length = 108

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +3

Query: 21  APRQEHTAQHSAGTVWESGSGEGEPPAM 104
           A RQ  T QH AGTV E      +PPAM
Sbjct: 2   AIRQATTPQHDAGTVLERKEQALKPPAM 29

>PHAR2_RAT (P62025) Phosphatase and actin regulator 2|
          Length = 569

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -2

Query: 280 KPASAASRMSPPRMATGQRASRAHSSP*ADANQTPEAMTGTAQMSAISVTHAVMLLLTAM 101
           +PA+AASR+SP  + +   + +   S     +  PE     A+  A     AV++ L  +
Sbjct: 204 QPAAAASRLSPNTVTSETSSLKGELSDTGVESLKPEETVAGAEEEATGKPKAVVVALPPV 263

Query: 100 AGGSPSP-LPLSQTVP 56
                SP LPL    P
Sbjct: 264 TVPPSSPALPLPPEDP 279

>PDM1_DROME (P31368) Protein nubbin (Protein twain) (POU domain protein 1)|
           (PDM-1) (dPOU-19) (dOCT1)
          Length = 601

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 281 ETRQRRQQDEPAQDGHWPARQPRALLPLS 195
           + +Q+RQ DEP Q  H   +QPR+  P S
Sbjct: 313 QKQQQRQVDEPLQLNHKMTQQPRSSTPHS 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,967,222
Number of Sequences: 219361
Number of extensions: 527896
Number of successful extensions: 2494
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)