ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast62h03 |
|---|---|
| Clone Library Name | barley_pub |
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 33.9 bits (76), Expect = 0.098 Identities = 15/34 (44%), Positives = 24/34 (70%) Frame = -2 Query: 244 CCSAAPPPGDDAFRCSSDAGTSSRAAKFSGSANT 143 CCSA PPP + RCSS + +SS +++ S S+++ Sbjct: 5 CCSALPPPPLEKGRCSSYSDSSSSSSERSSSSSS 38
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 32.7 bits (73), Expect = 0.22 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = -2 Query: 244 CCSAAPPPGDDAFRCS----SDAGTSSRAAKFSGSANTLCDARRWWRPSR 107 CCSA PPP + A RCS SD+ +SS + S S ++ +R R SR Sbjct: 5 CCSALPPPLEKA-RCSSYSYSDSSSSSSSNNSSSSTSSRSSSRSSSRSSR 53
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +3 Query: 87 SESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHR-KASSPGGGAAEQQQRPAAG 263 ++++++ R GR R SQ+ P AA +P+ R A+S G AA ++ RPA G Sbjct: 268 ADAVAAVRAGRRPPRPSQTP---PPGRAAPAAIPSGTTARVAANSAGRTAASRRSRPATG 324 Query: 264 RHR 272 HR Sbjct: 325 GHR 327
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +3 Query: 87 SESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHR-KASSPGGGAAEQQQRPAAG 263 ++++++ R GR R SQ+ P AA +P+ R A+S G AA ++ RPA G Sbjct: 268 ADAVAAVRAGRRPPRPSQTP---PPGRAAPAAIPSGTTARVAANSAGRTAASRRSRPATG 324 Query: 264 RHR 272 HR Sbjct: 325 GHR 327
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 31.6 bits (70), Expect = 0.49 Identities = 20/72 (27%), Positives = 29/72 (40%) Frame = +3 Query: 150 ALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISMAVASSSRDLEMIKE 329 +LP D P + EHR+ +PGG + R GR + V S R + E Sbjct: 1227 SLPPRKRPWHDGPGTSEHREMEAPGG---PSEDRGGKGRGGPGPAQRVPKSGRSSSLDGE 1283 Query: 330 DVGGYNNNHKIG 365 GY+ + G Sbjct: 1284 HHDGYHRDEPFG 1295
>YOR2_EAVBU (P28992) Hypothetical 25.6 kDa protein (ORF2)| Length = 227 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -2 Query: 163 FSGSANTLCDARRWWR---PSRCDDMLSELRCVNARTRGFDPALG 38 FSGS L A WWR R D+ +L+C N R + P+LG Sbjct: 19 FSGSL--LPSAAAWWRGVHEVRVTDLFKDLQCDNLRAKDAFPSLG 61
>BCCP_PSEAE (P37799) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = +3 Query: 90 ESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPAA 260 E S R+ RH + A+Q V+A FAA PA A++P AAE PAA Sbjct: 25 EGEESVRISRHSKTAAQPVYAQAPAFAAPVAAPAP----AAAAPAAAAAE--SAPAA 75
>E41L2_HUMAN (O43491) Band 4.1-like protein 2 (Generally expressed protein 4.1)| (4.1G) Length = 1005 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +3 Query: 207 KASSPGGGAAE-QQQRPAAGRHRRAISMAVASSSRDLEMIKEDVGGYNNNHKI 362 K SPG G E ++ P + ++S +SSS + E +EDVG Y +H++ Sbjct: 712 KEISPGSGPGEIRKVEPVTQKDSTSLSSESSSSSSESE--EEDVGEYRPHHRV 762
>FLBA_EMENI (P38093) Developmental regulator flbA| Length = 719 Score = 30.4 bits (67), Expect = 1.1 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 27/120 (22%) Frame = +3 Query: 9 TPSPTFTQSDPSAGSKPRVRAFTHLSSE----------------------SMSSQRLGRH 122 T +P+FT S + S+ R+F L+ E S SS L +H Sbjct: 78 TTTPSFTGSVIGSISRRNRRSFAALAREKTSSALANLSSIGSTTNSSLRQSASSGSLQKH 137 Query: 123 QRRASQSVFALPENFAAL-----DDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISM 287 R+ASQ F L D +S++ A A +Q PAA R R+ I + Sbjct: 138 SRKASQLSVGEISGFVPLSPPLSDGSGSSEQSSSAPFEPLSAVTEQPNPAAERRRQTIQL 197
>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus| (Acinus) Length = 1338 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 2/106 (1%) Frame = +3 Query: 30 QSDPSAGSKPRVRA--FTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEH 203 +++P A ++P+ +HL + + + + PEN +P +D+ Sbjct: 737 EAEPPAATQPQTSETQISHLLESERTHHTVEEKEEVTMDTSENRPENEVPEPPLPVADQV 796 Query: 204 RKASSPGGGAAEQQQRPAAGRHRRAISMAVASSSRDLEMIKEDVGG 341 P GGA E++++ ++ ++V S+++ ++ D G Sbjct: 797 SNDERPEGGAEEEEKKESSMPKSFKRKISVVSATKGVQAGNSDTEG 842
>RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (L40C) (L12EI)| Length = 110 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 174 LDDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISMAVASSSRDLEMIKEDVG 338 +D++ A+ + A+ P GGAA AAG A A +++ E ED+G Sbjct: 51 IDELIAAGNEKLATVPTGGAASAAPAAAAGGAAPAAEEAAKEEAKEEEESDEDMG 105
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Frame = +3 Query: 30 QSDPSAGSKPRVRAFTHLSSESMSSQR------LGRHQRRASQSVFALPENFAALDDVPA 191 +S SAG+ R + L + + LG+ +R Q V ++ A L+DV + Sbjct: 841 ESKSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQLVSIEEDDLAGLEDVSS 900 Query: 192 -SDEHRKASSPGGGAAEQQQRPAAGRHRR 275 DE +A S G AA Q + +RR Sbjct: 901 DGDESYEAESTDGEAAGQGVQTGRRPYRR 929
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/80 (27%), Positives = 31/80 (38%) Frame = +3 Query: 3 PQTPSPTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDD 182 P P+P P AG P R L + S R R +R+ S + D Sbjct: 2048 PPAPAP-----GPRAGLSPAARRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDS 2102 Query: 183 VPASDEHRKASSPGGGAAEQ 242 + SDE + + GGGA + Sbjct: 2103 MDPSDEEGRGGAGGGGAGSE 2122
>PAG1_MOUSE (Q3U1F9) Phosphoprotein associated with glycosphingolipid-enriched| microdomains 1 (Csk-binding protein) (Transmembrane phosphoprotein Cbp) Length = 429 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +3 Query: 195 DEHRKASSPGGGAAEQQQRPAAGRH-RRAISMAVASSSRDLEMIKEDVGG-YNNNHKIG 365 DE+ GGG AE+Q G H +R S++ S D + +E++ Y++ +K G Sbjct: 263 DENANLPQEGGGQAEEQAAEGTGGHSKRFSSLSYKSREEDPTLTEEEISAMYSSVNKPG 321
>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor| (EC 1.11.1.11) Length = 359 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +3 Query: 93 SMSSQRLGRHQRRASQSVF---ALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPAAG 263 S SS GR R+S + ALP A L P+ ++A + G G + A+ Sbjct: 19 STSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASA 78 Query: 264 RHRRAISMAVASSSRDLEMIKEDV 335 A S AVAS + +L+ +ED+ Sbjct: 79 S---AASAAVASGAAELKAAREDI 99
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.6 bits (65), Expect = 1.8 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 13/79 (16%) Frame = -2 Query: 229 PPPGDDAFRCSSDAG--TSSRAAKFSGSANTLC----DARRWWRPSRCDDMLSE-LRCVN 71 PPP A CSS A +S+ AA A T C A + P +D+LS C + Sbjct: 264 PPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAAAAALLYGPGGAEDLLSPGAPCAS 323 Query: 70 ARTRG------FDPALGSL 32 + G F P L SL Sbjct: 324 CSSSGANNAFAFGPELSSL 342
>MTMR3_MOUSE (Q8K296) Myotubularin-related protein 3 (EC 3.1.3.48)| Length = 1075 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%) Frame = +3 Query: 12 PSPTFTQSDPSAGSKPRVRAFTHL--------------SSESMSSQRLGRHQRRASQSVF 149 P P + +P P+ R+F +L SS+ +++ H R S F Sbjct: 594 PVPGTSPDEPPLSRLPKTRSFDNLTTTCENMVPLASRRSSDPSLNEKWQEHGRSLELSSF 653 Query: 150 ALPENFAALDDVPASDEHRKASSPGGGA 233 A +A ++VPA D RK S GGA Sbjct: 654 A-----SAGEEVPAMDSLRKPSRLLGGA 676
>SO2A1_HUMAN (Q92959) Solute carrier organic anion transporter family member 2A1| (Solute carrier family 21 member 2) (Prostaglandin transporter) (PGT) Length = 643 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 2 PPNTITHIHPERPKCRIEASRP 67 PP+T + IHP+ P CR + S P Sbjct: 430 PPSTSSSIHPQSPACRRDCSCP 451
>KCNAS_DROME (P08510) Potassium voltage-gated channel protein Shaker| Length = 655 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Frame = +3 Query: 72 FTHLSSESMSSQRLGRHQRRASQS-----VFALPENFAALDDVPASDEHRKASSPGGGAA 236 F H++S LG+H +++S S + L + + + + R A +P GA Sbjct: 499 FNHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAVAPFLGAQ 558 Query: 237 EQQQRPAAGRHRRAISMAV 293 +QQQ+P A ++SM++ Sbjct: 559 QQQQQPVAS----SLSMSI 573
>XYLT1_MOUSE (Q811B1) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)| (Peptide O-xylosyltransferase 1) Length = 953 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +3 Query: 162 NFAALDDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAIS 284 NF++LD + E R+A + GAAEQQQ A R RR ++ Sbjct: 34 NFSSLDS--GAGEQRRAGA-AAGAAEQQQPAAPRRERRDLA 71
>GIANT_DROME (P39572) Protein giant| Length = 448 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Frame = +3 Query: 84 SSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQ-RPAA 260 SS + +S+ R S + NF + +S A++ G + Q + AA Sbjct: 327 SSSNNNSESEDRAAAEESSDCDSQAGNFESKSATSSSSNLANATAANSGISSGSQVKDAA 386 Query: 261 GRHRRAISMAVASSSRDLEMIKED 332 RR + A A SRD IKED Sbjct: 387 YYERRRKNNAAAKKSRDRRRIKED 410
>GLND_KLEOX (P41393) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 887 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -2 Query: 142 LCDARRWWRPSRCDDMLSELRCVNARTRGFDPALGSLWVNVGDG 11 L DA + W D ++ R + ART D L LWV G G Sbjct: 36 LIDAFQRWLGEAFDSGIAAERLIEARTEFIDQLLQRLWVEYGFG 79
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/64 (29%), Positives = 25/64 (39%) Frame = +3 Query: 78 HLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPA 257 H +SES S R G+ + ++ P +A DEH S GGGA E Sbjct: 233 HSASESTSGHR-GQGSHTSPSALSPTPAGVSA-------DEHHNGSGTGGGAGEADHHST 284 Query: 258 AGRH 269 H Sbjct: 285 TEHH 288
>PERQ1_MOUSE (Q99MR1) PERQ amino acid rich with GYF domain protein 1| Length = 1011 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 156 PENFAALDDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISMAVASSS 305 PEN ++ +PA + GG A E++ PA G R +S++ SS Sbjct: 334 PENSSSPSSLPALGPLWTTNEEGGEAVEKELPPAEGDELRGLSLSPRISS 383
>ASML_HUMAN (O95671) N-acetylserotonin O-methyltransferase-like protein (ASMTL)| Length = 621 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +3 Query: 177 DDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISMAVASSSRDLE 317 D +PA+D S GG +E QR A R +A + ++ + E Sbjct: 227 DSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAE 273
>KRHB6_MOUSE (P97861) Keratin, type II cuticular Hb6 (Hair keratin, type II Hb6)| Length = 486 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = -2 Query: 289 AMDMARRWRPAAGRCCCSAAPPPGDDAFR-CSSDAGTSSRAAKF-SGS 152 A A P GRCC SAAP G +R S G+ S F SGS Sbjct: 11 AFSCASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGS 58
>RIPK5_CANFA (Q4VSN4) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 931 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +3 Query: 114 GRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQ 242 GRH+R Q L E D+ S H SSP GG A + Sbjct: 34 GRHRRYLGQLRQNLRETQKFFRDIKCSHSHSCPSSPAGGGAAE 76
>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3110 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -2 Query: 247 CCCSAAPPPGDDAFRCSSDAGTSSRAAKFSGSANTLCDARRWWRPSRCD 101 C CS G F+C+ + G + KFSG+ T C +R W RC+ Sbjct: 1060 CNCSTV---GSLDFQCNVNTGQCNCHPKFSGAKCTEC-SRGHWNYPRCN 1104
>BRC2_HALRO (O01409) T-box-containing protein 2 (AS-T2)| Length = 681 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +3 Query: 57 PRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSP 221 P +FT+ +S S SS + AS SV +++D+ EH +SP Sbjct: 467 PHDNSFTYYNSSSPSSSDSNQSNVNASFSVMTTTHASHSINDIMRISEHADVTSP 521
>THRC_BACSU (P04990) Threonine synthase (EC 4.2.3.1)| Length = 352 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -2 Query: 232 APPPGDDAFRCSSDAGTSSRAAKFSGSANTLC 137 A G+D C+S TS+ AA ++ AN C Sbjct: 70 AKEEGNDTIMCASTGNTSAAAAAYAARANMKC 101
>FHR5_HUMAN (Q9BXR6) Complement factor H-related protein 5 precursor (FHR-5)| Length = 569 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -2 Query: 238 SAAPPPGDDAFRCSSDAGTSSRAAKFSGSANTLCDARRWWRPSRCDD 98 S PP +RC S K GS C ++W P RC D Sbjct: 466 SVYPPGSTVTYRCQS-------FYKLQGSVTVTCRNKQWSEPPRCLD 505
>KPTA_BACHK (Q6HH75) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 185 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 15 SPTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQ 125 SP F S S G P R + HLS + ++++ +G+ + Sbjct: 105 SPRFLNSIESNGLSPMSRQYVHLSEDIITAELVGKRK 141
>MURD_BACTN (Q8A256) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 444 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/89 (24%), Positives = 38/89 (42%) Frame = +3 Query: 69 AFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQ 248 AF + + + Q L +H +A FA + A+ V D K + P EQ++ Sbjct: 209 AFIFWNDDPIIKQELAKHGLKAHLYPFAAVKEDGAIAYV--EDHEVKITEPIAFNMEQEE 266 Query: 249 RPAAGRHRRAISMAVASSSRDLEMIKEDV 335 G+H S+A S+ + KE++ Sbjct: 267 LALTGQHNLYNSLAAGISANLAGITKENI 295
>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1790 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Frame = -2 Query: 268 WRPAAGRCCCSA-APPPGDDAFRCSSDAGTSSRAAKFSGSANTLCDARRWWRPS 110 W+ A+G C S P G +C+S G F G A C A W P+ Sbjct: 1085 WKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPN 1138
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 9 TPSPTFTQSDPSAGSKPRVRAFTHLSSESM---SSQRLGRHQRRASQSVF 149 TP+ + D S G++P V TH S + SS GRH R ++++ F Sbjct: 599 TPNEAWCTRDLSGGNQPSVCRVTHDGSPKLGVSSSVLNGRHSRVSTEAGF 648
>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)| (Proline-rich synapse-associated protein 2) (ProSAP2) (Fragment) Length = 797 Score = 27.7 bits (60), Expect = 7.0 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +3 Query: 132 ASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPAAGRH---RRAISMAVASS 302 A +S A F++L ++ + R PGGGA+ RP +GR+ RRA S +S Sbjct: 592 AKKSPIAAARLFSSLGELSSISAQRSPGGPGGGAS-YSVRP-SGRYPVARRAPSPVKPAS 649 Query: 303 SRDLEMIKEDVGG 341 +E + GG Sbjct: 650 LERVEGLGAGAGG 662
>PFA3_GIBZE (Q4IA62) Palmitoyltransferase PFA3 (EC 2.3.1.-) (Protein fatty| acyltransferase 3) Length = 550 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -2 Query: 286 MDMARRWRPAAGRCCCSAA 230 M ARRW A RCCC+ A Sbjct: 1 MASARRWARKAERCCCTFA 19
>UL25_EHV1B (P28928) Virion protein UL25| Length = 587 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Frame = +3 Query: 18 PTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQ----------RRASQSVFALPENF 167 PTFT S + ++ A H ++ + + Q R + V + + Sbjct: 42 PTFTVSSNTRADPLKLVAARHRAAAAAIDTLEAQSQYGVANVDALIRPLERQVAKVADAL 101 Query: 168 AALDDVPASDEHRKASSPGGGAAEQQQRP 254 AAL+D + E A++P A+E QRP Sbjct: 102 AALEDAARAAESADAATPQVNASEADQRP 130
>VTS1_ASPFU (Q4WJS2) Protein vts1| Length = 602 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +3 Query: 99 SSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQQQRPAA 260 SS+ LG HQ RAS + P ++ P+S+ + S AE AA Sbjct: 25 SSRNLGSHQLRASADMSGFPSPLSSRSIRPSSEVYYSQQSQAQNNAEDPLDRAA 78
>RIPK5_BOVIN (Q4TVR5) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 928 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = +3 Query: 177 DDVPASDEHRKASSPGGGAAEQQQRPAAGRHRRAISMAVASSSRDLEMIKEDVGG 341 D VP E PGGG ++ GR+RR + + + RD + D+ G Sbjct: 4 DGVPWGSEPESGPGPGGGGVIRELCRGFGRYRRYLG-RLRQNLRDTQKFFRDLRG 57
>ORB2_DROME (Q9VSR3) Probable RNA-binding protein orb2| Length = 704 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +3 Query: 90 ESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGG 230 + Q+L +HQ++ S ++ AL + + S SSPGGG Sbjct: 191 QHQQQQQLHQHQQQLSPNLSALHHHHQQQQQLRESGGSHSPSSPGGG 237
>GUN_ROBSP (P23044) Endoglucanase 1 (EC 3.2.1.4) (Endoglucanase I)| (Endo-1,4-beta-glucanase) (Carboxymethyl-cellulase I) (CMCASE I) Length = 375 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/74 (28%), Positives = 30/74 (40%) Frame = +3 Query: 3 PQTPSPTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDD 182 PQTP P S S G HL+S +MS+ + + L N AA+D Sbjct: 124 PQTPQPQPRSSLASFGVS------WHLASMTMSAHFWAHERATRHGDLVVLANNQAAIDA 177 Query: 183 VPASDEHRKASSPG 224 + A++ PG Sbjct: 178 IRAANASNLIIMPG 191
>CBX2_MOUSE (P30658) Chromobox protein homolog 2 (Modifier 3 protein) (M33)| Length = 519 Score = 27.3 bits (59), Expect = 9.2 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Frame = +3 Query: 51 SKPRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGG 230 S+ +V+A + L+ ++ ++ + G + + L PA + KA PGGG Sbjct: 264 SQSQVQAASRLALKAQATNKCG-----LGLDLKVRTQKGGELGGSPAGGKVPKA--PGGG 316 Query: 231 AAEQQQRPAAGR--HRRAISMAVASSSRDLEMIKEDVGG 341 AAEQQ+ +G + A + ++ DL+ +K V G Sbjct: 317 AAEQQRGNHSGSPGAQLAPTQELSLQVLDLQSVKNGVPG 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.485 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,471,146 Number of Sequences: 219361 Number of extensions: 597035 Number of successful extensions: 2400 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2398 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
