ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479456.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-104
2ref|XM_506556.1| PREDICTED Oryza sativa (japonica cultivar-group... 387 e-104
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 387 e-104
4dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 387 e-104
5dbj|AK102921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
6dbj|AK060349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
7ref|XM_470408.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.023
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.023
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
10gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 48 0.023
11gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 48 0.023
12dbj|AK072278.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
13ref|NM_201589.2| Homo sapiens v-maf musculoaponeurotic fibrosarc... 44 0.35
14ref|NM_185228.2| Oryza sativa (japonica cultivar-group), predic... 44 0.35
15gb|BC082303.1| Mus musculus phosphatidylinositol transfer protei... 44 0.35
16ref|XM_001000371.1| PREDICTED: Mus musculus hypothetical protein... 44 0.35
17ref|XM_978123.1| PREDICTED: Mus musculus hypothetical protein LO... 44 0.35
18emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.35
19gb|AY083269.1| Homo sapiens transcription factor mammalian MafA ... 44 0.35
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
21gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 44 0.35
22emb|AJ331066.1|HSA331066 Homo sapiens genomic sequence surroundi... 44 0.35
23gb|AC164421.3| Mus musculus chromosome 5, clone RP24-257M14, com... 44 0.35
24dbj|AB086960.1| Homo sapiens MafA gene for pancreatic beta-cell ... 44 0.35
25gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.4
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.4
27gb|DQ356948.1| Crocodilepox virus, complete genome 42 1.4
28emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.4
30gb|U23762.1|SPU23762 Streptomyces phaeochromogenes plasmid pJV1,... 42 1.4
31ref|XM_482175.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
32ref|XM_468840.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
33gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.5
34gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 5.5
35gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 40 5.5
36gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putat... 40 5.5
37emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 5.5
38dbj|AB227303.1| Aspergillus oryzae cDNA, contig sequence: AoEST4167 40 5.5
39gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 40 5.5
40gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I... 40 5.5
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.5
43dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 5.5
44dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.5
45dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
46dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
47dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
48dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
49dbj|AK070773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
50gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine synthase 2 ... 40 5.5
51dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
52gb|AY105548.1| Zea mays PCO095526 mRNA sequence 40 5.5
53gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 5.5 
>ref|XM_479456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 929

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
           ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 74  cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 133

                                                                       
Query: 175 acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
           ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 134 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 193

                                                                       
Query: 235 actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 194 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 253

                                                                       
Query: 295 ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
           ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 254 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 313

                                                                  
Query: 355 acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
           |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 314 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 368
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>ref|XM_506556.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.109 mRNA
          Length = 931

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
           ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 76  cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 135

                                                                       
Query: 175 acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
           ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 136 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 195

                                                                       
Query: 235 actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 196 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 255

                                                                       
Query: 295 ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
           ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 256 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 315

                                                                  
Query: 355 acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
           |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 316 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 370
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                            
Query: 115      cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
                ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 28299070 cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 28299129

                                                                            
Query: 175      acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
                ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 28299130 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 28299189

                                                                            
Query: 235      actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
                |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 28299190 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 28299249

                                                                            
Query: 295      ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
                ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 28299250 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 28299309

                                                                       
Query: 355      acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
                |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 28299310 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 28299364
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0470D12
          Length = 157248

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                         
Query: 115   cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
             ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 24633 cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 24692

                                                                         
Query: 175   acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
             ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 24693 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 24752

                                                                         
Query: 235   actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
             |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 24753 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 24812

                                                                         
Query: 295   ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
             ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 24813 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 24872

                                                                    
Query: 355   acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
             |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24873 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 24927
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>dbj|AK102921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C10, full
           insert sequence
          Length = 931

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
           ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 76  cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 135

                                                                       
Query: 175 acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
           ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 136 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 195

                                                                       
Query: 235 actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 196 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 255

                                                                       
Query: 295 ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
           ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 256 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 315

                                                                  
Query: 355 acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
           |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 316 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 370
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>dbj|AK060349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F05, full
           insert sequence
          Length = 929

 Score =  387 bits (195), Expect = e-104
 Identities = 270/295 (91%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgctcgacgagaaggagaccacgatggtcttcgagaagctcttcatgttcaccggcccca 174
           ||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || || |
Sbjct: 74  cgctcgacgagaaggagacgaagatggtgttcgagaagctgttcaagttcacggggccga 133

                                                                       
Query: 175 acctgaagcacctcctggatcggccctccgtggagggccccgacccggagtccggccgct 234
           ||||||||||||||||||| |||||  | |||||||| ||||||||| || |||| ||||
Sbjct: 134 acctgaagcacctcctggagcggccggcggtggaggggcccgacccgcaggccgggcgct 193

                                                                       
Query: 235 actgcctccgcctccacaagaaccgcgtcttctacgcctccgagtcgctcgtccgccgcg 294
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 194 actgcctccgcctccacaagaaccgcgtctactacgcctccgaggcgctcgtccgccgcg 253

                                                                       
Query: 295 ccaccgccgtgtcccgcacgcgcctcgccagcgtcggcacgcccatcggcaagttcaccc 354
           ||||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 254 ccaccgccgtcgcccgcccgcgcctcgccggggtcggcacgcccatcggcaagttcaccc 313

                                                                  
Query: 355 acggcggcgccttccacctcaccgtccacgcgctcgacctcctcgccgcccacgc 409
           |||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 314 acggcggcgcgttccacctcaccgtccacgccctcgacctcctcgccgcccacgc 368
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>ref|XM_470408.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1845

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 cgcctccgagtcgctcgtccgccgcgccaccg 300
           |||| |||| ||||||||||||||||||||||
Sbjct: 324 cgccgccgactcgctcgtccgccgcgccaccg 355
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 269      cgcctccgagtcgctcgtccgccgcgccaccg 300
                |||| |||| ||||||||||||||||||||||
Sbjct: 35362772 cgccgccgactcgctcgtccgccgcgccaccg 35362741



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      acgcgctcgacctcctcgcc 401
                ||||||||||||||||||||
Sbjct: 18267930 acgcgctcgacctcctcgcc 18267911
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 269      cgcctccgagtcgctcgtccgccgcgccaccg 300
                |||| |||| ||||||||||||||||||||||
Sbjct: 35452844 cgccgccgactcgctcgtccgccgcgccaccg 35452813



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      acgcgctcgacctcctcgcc 401
                ||||||||||||||||||||
Sbjct: 18261471 acgcgctcgacctcctcgcc 18261452
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence,
            complete sequence
          Length = 116443

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 269  cgcctccgagtcgctcgtccgccgcgccaccg 300
            |||| |||| ||||||||||||||||||||||
Sbjct: 5682 cgccgccgactcgctcgtccgccgcgccaccg 5713
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
              sequence
          Length = 133846

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 269    cgcctccgagtcgctcgtccgccgcgccaccg 300
              |||| |||| ||||||||||||||||||||||
Sbjct: 124854 cgccgccgactcgctcgtccgccgcgccaccg 124885
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>dbj|AK072278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018A12, full
           insert sequence
          Length = 1924

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 cgcctccgagtcgctcgtccgccgcgccaccg 300
           |||| |||| ||||||||||||||||||||||
Sbjct: 454 cgccgccgactcgctcgtccgccgcgccaccg 485
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>ref|NM_201589.2| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           A (avian) (MAFA), mRNA
          Length = 1062

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 290 ccgcgccaccgccgtgtcccgc 311
           ||||||||||||||||||||||
Sbjct: 652 ccgcgccaccgccgtgtcccgc 631
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>ref|NM_185228.2| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2379

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 282 ctcgtccgccgcgccaccgccg 303
           ||||||||||||||||||||||
Sbjct: 121 ctcgtccgccgcgccaccgccg 142
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>gb|BC082303.1| Mus musculus phosphatidylinositol transfer protein,
           membrane-associated 2, mRNA (cDNA clone IMAGE:6856087)
          Length = 7012

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 287 ccgccgcgccaccgccgtgtcccgcacgcgcctc 320
           |||| |||||||||||||| ||| ||||||||||
Sbjct: 40  ccgcggcgccaccgccgtgccccccacgcgcctc 7
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>ref|XM_001000371.1| PREDICTED: Mus musculus hypothetical protein LOC672674 (LOC672674),
           mRNA
          Length = 666

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 287 ccgccgcgccaccgccgtgtcccgcacgcgcctc 320
           |||| |||||||||||||| ||| ||||||||||
Sbjct: 367 ccgcggcgccaccgccgtgccccccacgcgcctc 400
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>ref|XM_978123.1| PREDICTED: Mus musculus hypothetical protein LOC665607 (LOC665607),
           mRNA
          Length = 786

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 287 ccgccgcgccaccgccgtgtcccgcacgcgcctc 320
           |||| |||||||||||||| ||| ||||||||||
Sbjct: 487 ccgcggcgccaccgccgtgccccccacgcgcctc 520
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
              complete sequence
          Length = 163738

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 282    ctcgtccgccgcgccaccgccg 303
              ||||||||||||||||||||||
Sbjct: 115353 ctcgtccgccgcgccaccgccg 115332
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>gb|AY083269.1| Homo sapiens transcription factor mammalian MafA gene, complete cds
          Length = 1059

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 290 ccgcgccaccgccgtgtcccgc 311
           ||||||||||||||||||||||
Sbjct: 649 ccgcgccaccgccgtgtcccgc 628
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 282      ctcgtccgccgcgccaccgccg 303
                ||||||||||||||||||||||
Sbjct: 21301879 ctcgtccgccgcgccaccgccg 21301858
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>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 290   ccgcgccaccgccgtgtcccgc 311
             ||||||||||||||||||||||
Sbjct: 99736 ccgcgccaccgccgtgtcccgc 99757
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>emb|AJ331066.1|HSA331066 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-GO24C
          Length = 665

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 290 ccgcgccaccgccgtgtcccgc 311
           ||||||||||||||||||||||
Sbjct: 178 ccgcgccaccgccgtgtcccgc 157
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>gb|AC164421.3| Mus musculus chromosome 5, clone RP24-257M14, complete sequence
          Length = 154470

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 287   ccgccgcgccaccgccgtgtcccgcacgcgcctc 320
             |||| |||||||||||||| ||| ||||||||||
Sbjct: 35487 ccgcggcgccaccgccgtgccccccacgcgcctc 35454
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>dbj|AB086960.1| Homo sapiens MafA gene for pancreatic beta-cell specific
           transcriptional activator, complete cds
          Length = 1076

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 290 ccgcgccaccgccgtgtcccgc 311
           ||||||||||||||||||||||
Sbjct: 657 ccgcgccaccgccgtgtcccgc 636
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 313     cgcgcctcgccagcgtcggcacgcccatc 341
               ||||| ||| |||||||||||||||||||
Sbjct: 2970098 cgcgcatcgtcagcgtcggcacgcccatc 2970070
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 313   cgcgcctcgccagcgtcggcacgcccatc 341
             ||||| ||| |||||||||||||||||||
Sbjct: 97527 cgcgcatcgtcagcgtcggcacgcccatc 97499
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 387    ctcgacctcctcgccgcccacgcgc 411
              |||||||||||||||||| ||||||
Sbjct: 114502 ctcgacctcctcgccgccgacgcgc 114478
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 313     cgcgcctcgccagcgtcggcacgcccatc 341
               ||||| ||| |||||||||||||||||||
Sbjct: 3943075 cgcgcatcgtcagcgtcggcacgcccatc 3943047
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 382     acgcgctcgacctcctcgccgccca 406
               ||||||||| |||||||||||||||
Sbjct: 2775585 acgcgctcggcctcctcgccgccca 2775609
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>gb|U23762.1|SPU23762 Streptomyces phaeochromogenes plasmid pJV1, complete sequence
          Length = 11143

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 384 gcgctcgacctcctcgccgcc 404
           |||||||||||||||||||||
Sbjct: 472 gcgctcgacctcctcgccgcc 492
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>ref|XM_482175.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 cgccaccgccgtgtcccgca 312
           ||||||||||||||||||||
Sbjct: 34  cgccaccgccgtgtcccgca 53
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>ref|XM_468840.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 221 acgcgctcgacctcctcgcc 240
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    cgcgctcgacctcctcgccg 402
              ||||||||||||||||||||
Sbjct: 468225 cgcgctcgacctcctcgccg 468244
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     gcgctcgacctcctcgccgc 403
               ||||||||||||||||||||
Sbjct: 1881775 gcgctcgacctcctcgccgc 1881756
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>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete
             sequence
          Length = 159579

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   acgcgctcgacctcctcgcc 401
             ||||||||||||||||||||
Sbjct: 34361 acgcgctcgacctcctcgcc 34342
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>gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putative conserved protein
             gene, partial cds; putative conserved protein, TetR-family
             regulatory protein,
             N5,N10-methylenetetrahydromethanopterin reductase,
             penicillin-binding protein, putative conserved protein,
             7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase,
             putative conserved proteins, necrosis inducing factor,
             conserved membrane-associated protein, transcriptional
             regulator, putative conserved protein, and discrete type
             II thioesterase genes, complete cds; valinomycin
             biosynthesis gene cluster, complete sequence; putative
             transposase gene, complete cds; and unknown gene
          Length = 39345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 116   gctcgacgagaaggagaccacgatggtc 143
             |||||||||| ||||||||||| |||||
Sbjct: 28861 gctcgacgaggaggagaccacgctggtc 28888
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgatggtcttcgagaagctc 155
              ||||||||||||||||||||
Sbjct: 223815 cgatggtcttcgagaagctc 223834
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>dbj|AB227303.1| Aspergillus oryzae cDNA, contig sequence: AoEST4167
          Length = 1015

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 cacctcctggatcggccctc 202
           ||||||||||||||||||||
Sbjct: 947 cacctcctggatcggccctc 966
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   ccccaacctgaagcacctcctgga 193
             |||||||||| |||||||||||||
Sbjct: 24820 ccccaacctggagcacctcctgga 24843
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>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    ccccaacctgaagcacctcctgga 193
              |||||||||| |||||||||||||
Sbjct: 172341 ccccaacctggagcacctcctgga 172364
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      cgccaccgccgtgtcccgca 312
                ||||||||||||||||||||
Sbjct: 18364500 cgccaccgccgtgtcccgca 18364519
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 382     acgcgctcgacctcctcgcc 401
               ||||||||||||||||||||
Sbjct: 2572245 acgcgctcgacctcctcgcc 2572264
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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    ctgcctccgcctccacaaga 255
              ||||||||||||||||||||
Sbjct: 923525 ctgcctccgcctccacaaga 923506
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     gcacgcccatcggcaagttc 350
               ||||||||||||||||||||
Sbjct: 6099187 gcacgcccatcggcaagttc 6099206
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>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473F05
          Length = 140575

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   cgccaccgccgtgtcccgca 312
             ||||||||||||||||||||
Sbjct: 50669 cgccaccgccgtgtcccgca 50688
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>dbj|AK104400.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E03, full
           insert sequence
          Length = 1175

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 369 acgcgctcgacctcctcgcc 388
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>dbj|AK104138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H10, full
           insert sequence
          Length = 1172

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 366 acgcgctcgacctcctcgcc 385
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>dbj|AK073355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A08, full
           insert sequence
          Length = 1245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 368 acgcgctcgacctcctcgcc 387
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>dbj|AK070773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072C11, full
           insert sequence
          Length = 801

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 5   acgcgctcgacctcctcgcc 24
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>gb|AF136942.1|AF136942 Hordeum vulgare nicotianamine synthase 2 (nashor2) mRNA, complete
           cds
          Length = 1346

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 389 cgacctcctcgccgcccacg 408
           ||||||||||||||||||||
Sbjct: 383 cgacctcctcgccgcccacg 402
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>dbj|AK061303.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G08, full
           insert sequence
          Length = 1070

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 269 acgcgctcgacctcctcgcc 288
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>gb|AY105548.1| Zea mays PCO095526 mRNA sequence
          Length = 852

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 acgcgctcgacctcctcgcc 401
           ||||||||||||||||||||
Sbjct: 450 acgcgctcgacctcctcgcc 469
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ccctgcgccatgcgtccgct 118
               ||||||||||||||||||||
Sbjct: 2209356 ccctgcgccatgcgtccgct 2209375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,144,929
Number of Sequences: 3902068
Number of extensions: 2144929
Number of successful extensions: 52369
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51398
Number of HSP's gapped (non-prelim): 971
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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