| Clone Name | bast62g12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 129 gtttgatcccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccc 188 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 gtttgatcccatggcgtccaagaggatcctcaaggagctcaaggacctgcagaaggaccc 60 Query: 189 tcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccat 248 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 61 tcccacctcgtgcagcgcaggtcctgtaggtgaggacatgttccactggcaggcaactat 120 Query: 249 catggggccctcggagagcccgttcaccggtggtctatttttggtcaacattcatttccc 308 |||||| ||||| || || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 121 catgggaccctctgacagtccgttcaccggtggtctatttttggtgaacattcatttccc 180 Query: 309 accggattaccccttcaagcccccgaaggtctctttccgcaccaag 354 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 accggattaccccttcaagcccccgaaggtctctttccgcaccaag 226
>ref|XM_474269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| ||||||||||||||||| ||||| || || || ||||| ||| Sbjct: 61 tgcagcgcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccc 120 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 || || ||||| || | ||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 121 tcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattat 180 Query: 319 cccttcaagcccccgaaggtctctttccgcaccaag 354 || || || || |||||||||||||||||||||||| Sbjct: 181 ccttttaaaccaccgaaggtctctttccgcaccaag 216
>gb|BT016295.1| Zea mays clone Contig128 mRNA sequence Length = 788 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 126 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 185 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| Sbjct: 186 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 245 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 ||||| ||||| || | ||||| |||| ||||| |||||||| ||||||||||||||| Sbjct: 246 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 305 Query: 319 cccttcaagcccccgaaggtctctttccgcaccaag 354 || |||||||| || ||||| ||||||||||||||| Sbjct: 306 cctttcaagccaccaaaggtgtctttccgcaccaag 341
>gb|AY083611.1| Oryza sativa elicitor and UV light related transcription factor (Elr) mRNA, complete cds Length = 576 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 124 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 183 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| ||||||||||||||||| ||||| || || || ||||| ||| Sbjct: 184 tgcagcgcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccc 243 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 || || ||||| || | ||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 244 tcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattat 303 Query: 319 cccttcaagcccccgaaggtctctttccgcaccaag 354 || || || || |||||||||||||||||||||||| Sbjct: 304 ccttttaaaccaccgaaggtctctttccgcaccaag 339
>dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A01, full insert sequence Length = 832 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 156 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 215 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| ||||||||||||||||| ||||| || || || ||||| ||| Sbjct: 216 tgcagcgcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccc 275 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 || || ||||| || | ||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 276 tcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattat 335 Query: 319 cccttcaagcccccgaaggtctctttccgcaccaag 354 || || || || |||||||||||||||||||||||| Sbjct: 336 ccttttaaaccaccgaaggtctctttccgcaccaag 371
>gb|AY109692.1| Zea mays CL301_1 mRNA sequence Length = 912 Score = 230 bits (116), Expect = 2e-57 Identities = 191/216 (88%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||| Sbjct: 125 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 184 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| ||||||| ||||||||| ||||| || |||||||||||||| Sbjct: 185 tgcagcgcaggtcctgttggtgaggccatgttccattggcaagcgaccatcatggggcct 244 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 ||||| ||||| || | ||||| |||| ||||| |||||||| ||||||||||||||| Sbjct: 245 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 304 Query: 319 cccttcaagcccccgaaggtctctttccgcaccaag 354 || |||||||| || ||||| ||||||||||||||| Sbjct: 305 cctttcaagccaccaaaggtgtctttccgcaccaag 340
>dbj|D50574.1| Oryza sativa mRNA, similar to ubiquitin conjugating enzyme Length = 295 Score = 157 bits (79), Expect = 3e-35 Identities = 95/101 (94%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||| Sbjct: 144 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccntcccacntca 203 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 204 tgcagcgcaggtcctgtgggtgaggacatgttccattggca 244
>gb|BT017507.1| Zea mays clone EL01N0417C02.c mRNA sequence Length = 727 Score = 147 bits (74), Expect = 3e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 102 ccatggcgtcgaagcggatcctcaaggagctcaaggacctgcagaaggatcctcccacct 161 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggc 256 | ||||||||||| ||||| | || || |||||| |||||||||| || || ||||||| Sbjct: 162 cttgcagcgcagggcctgttgccgaagatatgttctactggcaggcgacgattatggggc 221 Query: 257 cctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatt 316 | || || ||||| | | | ||||| |||||||||||| ||||| || |||||||| | Sbjct: 222 catcagatagcccatacgctggtggcgtatttttggtcactattcactttccaccggact 281 Query: 317 accccttcaagcccccgaaggt 338 |||| ||||| || |||||||| Sbjct: 282 acccattcaaaccaccgaaggt 303
>gb|AY106353.1| Zea mays PCO068301 mRNA sequence Length = 727 Score = 147 bits (74), Expect = 3e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 140 ccatggcgtcgaagcggatcctcaaggagctcaaggacctgcagaaggatcctcccacct 199 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggc 256 | ||||||||||| ||||| | || || |||||| |||||||||| || || ||||||| Sbjct: 200 cttgcagcgcaggccctgttgccgaagatatgttctactggcaggcgacgattatggggc 259 Query: 257 cctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatt 316 | || || ||||| | | | ||||| |||||||||||| ||||| || |||||||| | Sbjct: 260 catcagatagcccatacgctggtggcgtatttttggtcactattcactttccaccggact 319 Query: 317 accccttcaagcccccgaaggt 338 |||| ||||| || |||||||| Sbjct: 320 acccattcaaaccaccgaaggt 341
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 135 bits (68), Expect = 1e-28 Identities = 173/208 (83%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 ||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 40 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaggacccccccacatc 99 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 |||||| |||||||||| |||||||||||||| || ||||| || || || ||||| || Sbjct: 100 atgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaacaattatgggacc 159 Query: 258 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 317 | || || || | | |||||| | ||||| || |||||||||||||| || ||||| Sbjct: 160 acctgacagtccctatgctggtggtgtttttttagtgaacattcatttcccgccagatta 219 Query: 318 ccccttcaagcccccgaaggtctctttc 345 ||||||||| || || ||||| |||||| Sbjct: 220 ccccttcaaacctccaaaggtttctttc 247
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 127 bits (64), Expect = 3e-26 Identities = 172/208 (82%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 ||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 100 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaggacccccccacatc 159 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 |||||| |||||| ||| |||||||||||||| || ||||| || || || ||||| || Sbjct: 160 atgcagtgcaggtgctgctggtgaggacatgtttcattggcaagcaacaattatgggacc 219 Query: 258 ctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggatta 317 | || || || | | |||||| | ||||| || |||||||||||||| || ||||| Sbjct: 220 acctgacagtccctatgctggtggtgtttttttagtgaacattcatttcccgccagatta 279 Query: 318 ccccttcaagcccccgaaggtctctttc 345 ||||||||| || || ||||| |||||| Sbjct: 280 ccccttcaaacctccaaaggtttctttc 307
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 35454 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 35395 Query: 199 tgcagcgcaggt 210 |||||||||||| Sbjct: 35394 tgcagcgcaggt 35383 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggaga 265 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 34390 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 34331 Query: 266 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 325 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 34330 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 34271 Query: 326 agcccccgaaggt 338 | || |||||||| Sbjct: 34270 aaccaccgaaggt 34258 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 aggtctctttccgcaccaag 354 |||||||||||||||||||| Sbjct: 33918 aggtctctttccgcaccaag 33899
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 34124072 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 34124013 Query: 199 tgcagcgcaggt 210 |||||||||||| Sbjct: 34124012 tgcagcgcaggt 34124001 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggaga 265 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 34123008 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 34122949 Query: 266 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 325 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 34122948 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 34122889 Query: 326 agcccccgaaggt 338 | || |||||||| Sbjct: 34122888 aaccaccgaaggt 34122876 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 aggtctctttccgcaccaag 354 |||||||||||||||||||| Sbjct: 34122536 aggtctctttccgcaccaag 34122517 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccgccgtccgtcgccgccgc 60 |||||||||||||||||||| Sbjct: 23111632 ccgccgtccgtcgccgccgc 23111651 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccgccgtccgtcgccgccgc 60 |||||||||||||||||||| Sbjct: 12222082 ccgccgtccgtcgccgccgc 12222101
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 127 bits (64), Expect = 3e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 41162 atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctca 41103 Query: 199 tgcagcgcaggt 210 |||||||||||| Sbjct: 41102 tgcagcgcaggt 41091 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggaga 265 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 40098 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 40039 Query: 266 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 325 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 40038 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 39979 Query: 326 agcccccgaaggt 338 | || |||||||| Sbjct: 39978 aaccaccgaaggt 39966 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 aggtctctttccgcaccaag 354 |||||||||||||||||||| Sbjct: 39626 aggtctctttccgcaccaag 39607
>gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 117 bits (59), Expect = 3e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 154 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 213 ||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 156 atcctcaaggaactcaaggacctgcagaaggacccgcccacatcatgcagtgcaggtcct 215 Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggggccctcggagagcccgttc 273 | |||||||||||||| || ||||| || || || ||||| ||| | || | || | Sbjct: 216 gctggtgaggacatgtttcattggcaagcaacaattatgggaccccctgacggtccctat 275 Query: 274 accggtggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccg 333 |||| ||| | || || || |||||||||||||| |||||||||||||||||||| || Sbjct: 276 gccggcggtgttttcttagtgaacattcatttccctccggattaccccttcaagccacca 335 Query: 334 aaggtctcttt 344 ||||| ||||| Sbjct: 336 aaggtatcttt 346
>ref|XM_464900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 728 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 34 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 93 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 94 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 139
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || ||| Sbjct: 1 atggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccc 258 ||||| |||||||||| |||||||| |||||||| |||||||| ||||| ||||| || Sbjct: 61 tgcagtgcaggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccct 120 Query: 259 tcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattac 318 | || || || | | |||||| | || ||||| || ||||||||||| ||||| ||| Sbjct: 121 ccagatagtccctatgctggtggtgttttcttggtgaatattcatttccccccggactac 180 Query: 319 cccttcaagcccccgaaggtctcttt 344 |||||||| || || ||||| ||||| Sbjct: 181 cccttcaaacctccaaaggtgtcttt 206
>dbj|AK121248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101B08, full insert sequence Length = 729 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 34 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 93 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 94 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 139
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 ||||||||| ||| | ||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 137 catggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaagacccccccacatc 196 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 |||||| |||||||||| |||||||||||||| || ||||| Sbjct: 197 atgcagtgcaggtcctgctggtgaggacatgtttcattggca 238 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 295 aacattcatttcccaccggattaccccttcaagcccccgaaggtctctttc 345 |||||||||||||| || |||||||||||||| || || ||||| |||||| Sbjct: 294 aacattcatttcccgccagattaccccttcaaacctccaaaggtttctttc 344
>dbj|AB074412.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5b, complete cds Length = 574 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 30 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 89 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 | |||||||| || ||||| | || || ||||||||||||||||| Sbjct: 90 cctgcagcgccggccctgtggcagaagatatgttccactggcaggc 135
>gb|AY109411.1| Zea mays CL25406_3 mRNA sequence Length = 1037 Score = 109 bits (55), Expect = 6e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 140 tggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcat 199 ||||||| |||||||||| |||||||| ||||| || |||||||||||||||||||| | Sbjct: 531 tggcgtcaaagaggatccagaaggagctcaaggatcttcagaaggaccctcccacctcgt 472 Query: 200 gcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 471 gcagtgcaggtcctgttggtgaagatatattccactggcaggc 429
>gb|AY104144.1| Zea mays PCO100898 mRNA sequence Length = 831 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 154 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 213 ||||||||||| | |||||| |||| ||||||||||| || |||||||| ||||||||| Sbjct: 149 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 208 Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggg 254 | |||||||| ||||||||||||||||| ||||||||||| Sbjct: 209 gctggtgaggatatgttccactggcaggcaaccatcatggg 249 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 289 ttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggtctcttt 344 ||||| |||||||||||||| || || |||||||||||||| || ||||| ||||| Sbjct: 284 ttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttt 339
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 103 bits (52), Expect = 4e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || ||| Sbjct: 1 atggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| |||||||||| |||||||| |||||||| |||||||| ||||| ||||| Sbjct: 61 tgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatggg 116 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggtctctttc 345 ||||||||||| ||||| |||||||||||||| || ||||| |||||| Sbjct: 160 attcatttccccccggactaccccttcaagcctccaaaggtatctttc 207
>dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D13, full insert sequence Length = 754 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 106 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 165 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 166 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 209
>dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A09, full insert sequence Length = 767 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 116 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 175 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 176 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 219
>emb|AJ867286.1| Oryza sativa (indica cultivar-group) mRNA for ubiquitin conjugating enzyme E2 (ubc4 gene) Length = 444 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 1 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 61 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 104
>dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5a, complete cds Length = 731 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 104 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 163 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 ||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 164 tgcagtgcaggtcctgttggtgaagacatgttccactggcaggc 207
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 6e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 9115295 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 9115354 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 9115355 cctgcagcgc 9115364 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 223 gacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| || || |||||||||||| Sbjct: 1078772 gacatgttccactggcaagcaacaatcatggggccc 1078807
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 99.6 bits (50), Expect = 6e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 18058 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatccccccacct 18117 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 18118 cctgcagcgc 18127
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 99.6 bits (50), Expect = 6e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 140 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 199 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggcc 243 |||||| |||||||||| |||||||| |||||||| ||||||||| Sbjct: 200 atgcagtgcaggtcctgctggtgaggatatgttccattggcaggcc 245
>gb|AF176040.1|AF176040 Mesembryanthemum crystallinum ubiquitin-conjugating enzyme UBC2 (Ubc2) mRNA, complete cds Length = 809 Score = 95.6 bits (48), Expect = 9e-17 Identities = 99/116 (85%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| || ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 81 atggcatcgaagaggatcttgaaggagctcaaggatctgcaaaaggatcctccaacctct 140 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| |||||||| ||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 141 tgcagcgctggtcctgttggtgaagacatgttccattggcaagcaaccattatggg 196
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 17799515 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 17799456 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 17799455 cctgcagcgc 17799446
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 4704 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 4645 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 4644 cctgcagcgc 4635
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 69937 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 69878 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 69877 cctgcagcgc 69868
>dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M05, full insert sequence Length = 2141 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 |||||||||||||| |||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 38 ccatggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacct 97 Query: 197 catgcagcgc 206 | |||||||| Sbjct: 98 cctgcagcgc 107
>gb|DQ294262.1| Solanum tuberosum clone 130D10 ubiquitin-conjugating enzyme E2-like protein mRNA, complete cds Length = 806 Score = 91.7 bits (46), Expect = 1e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||| ||||| |||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 101 aaggagcttaaggatttgcagaaggatcctcccacctcatgcagcgctggtccagtggct 160 Query: 220 gaggacatgttccactggcaggccaccatcatggggcc 257 ||||| |||||||| ||||| || || ||||||||||| Sbjct: 161 gaggatatgttccattggcaagcaacaatcatggggcc 198
>gb|AY389716.1| Hyacinthus orientalis ubiquitin-conjugating enzyme 9 mRNA, partial cds Length = 650 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| |||||||| |||||||||||||||||||| | ||| |||| Sbjct: 3 tgaaggatctgcagaaggatcctcccacttcatgcagcgcaggtcctgtggctgaagaca 62 Query: 227 tgttccactggca 239 ||||||| ||||| Sbjct: 63 tgttccattggca 75
>dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D03, full insert sequence Length = 1071 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggaga 265 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 38 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 97 Query: 266 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 325 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 98 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 157 Query: 326 agcccccgaaggt 338 | || |||||||| Sbjct: 158 aaccaccgaaggt 170 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 aggtctctttccgcaccaag 354 |||||||||||||||||||| Sbjct: 510 aggtctctttccgcaccaag 529
>dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G05, full insert sequence Length = 1071 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggaga 265 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 38 caggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagaca 97 Query: 266 gcccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttca 325 |||| || | ||||| |||| ||||| ||||||||||||||||||||||| || || | Sbjct: 98 gcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatcctttta 157 Query: 326 agcccccgaaggt 338 | || |||||||| Sbjct: 158 aaccaccgaaggt 170 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 aggtctctttccgcaccaag 354 |||||||||||||||||||| Sbjct: 510 aggtctctttccgcaccaag 529
>gb|AF532622.1| Glycine max ubiquitin-conjugation enzyme gene, complete cds Length = 929 Score = 83.8 bits (42), Expect = 3e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 154 atcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcct 213 |||||||||||||| |||||| ||||||| ||||| || || || |||||||| ||||| Sbjct: 199 atcctcaaggagctcaaggacttgcagaaagacccaccaacttcttgcagcgctggtcca 258 Query: 214 gtaggtgaggacatgttccactggca 239 |||| ||||||||||||||| ||||| Sbjct: 259 gtagctgaggacatgttccattggca 284
>gb|DQ222513.1| Solanum tuberosum clone 117E03 ubiquitin conjugating enzyme E2-like mRNA, complete cds Length = 835 Score = 79.8 bits (40), Expect = 5e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| |||||| |||| ||||||||||||||||| || ||||| || ||||||||||| Sbjct: 46 atggcatccaagcggattctcaaggagctgaaggatctccagaaagatcctcccacctct 105 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| || || |||| ||| || ||||| || ||||| || || |||||||| Sbjct: 106 tgcagcgctggcccagtagctgaagatatgtttcattggcaagcaacaatcatggg 161
>gb|U17250.1|BCSC1 Brassica oleracea ubiquitine conjugating enzyme mRNA, partial cds Length = 607 Score = 79.8 bits (40), Expect = 5e-12 Identities = 131/160 (81%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 195 ctcatgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||||||| || |||||||| ||||| || |||||||||||||| || || |||||||| Sbjct: 3 ctcatgcagtgccggtcctgtgggtgatgatatgttccactggcaagcgactatcatggg 62 Query: 255 gccctcggagagcccgttcaccggtggtctatttttggtcaacattcatttcccaccgga 314 || | || ||||| ||| |||| ||| | ||| | || |||||| |||||||| || Sbjct: 63 tccaactgatagcccattctccggaggtgtgtttcttgtttccattcacttcccaccaga 122 Query: 315 ttaccccttcaagcccccgaaggtctctttccgcaccaag 354 ||||||||||||||| || ||||| ||||| ||||||||| Sbjct: 123 ttaccccttcaagccaccaaaggtttcttt-cgcaccaag 161
>gb|BT013767.1| Lycopersicon esculentum clone 132651R, mRNA sequence Length = 844 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 163 atggcgtcgaagaggatattgaaggagctcaaggatctgcagaaggatccccccacatca 222 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||| || ||||| || | ||||| |||||||| ||||| || || ||||||||||| Sbjct: 223 tgcagtgctggtccagtggcagaggatatgttccattggcaagcaacaatcatggggcc 281
>gb|L23762.1|TOM1KUC Lycopersicon esculentum ubiquitin carrier protein (Ubc) mRNA, complete cds Length = 825 Score = 77.8 bits (39), Expect = 2e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 167 atggcgtcgaagaggatattgaaggagctcaaggatctgcagaaggatccccccacatca 226 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||| || ||||| || | ||||| |||||||| ||||| || || ||||||||||| Sbjct: 227 tgcagtgctggtccagtggcagaggatatgttccattggcaagcaacaatcatggggcc 285
>ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08690 mRNA, complete cds Length = 724 Score = 73.8 bits (37), Expect = 3e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 103 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 162 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| ||||| || | ||||||||||||||| ||||| ||||| |||||||| Sbjct: 163 ctgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatggg 219
>gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC11 (At3g08690) mRNA, complete cds Length = 733 Score = 73.8 bits (37), Expect = 3e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 96 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 155 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| ||||| || | ||||||||||||||| ||||| ||||| |||||||| Sbjct: 156 ctgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatggg 212
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 ||||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 34910940 catggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 34910999 Query: 198 atgcagcgcaggt 210 |||||| |||||| Sbjct: 34911000 atgcagtgcaggt 34911012 Score = 65.9 bits (33), Expect = 8e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 34932287 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 34932346 Query: 198 atgcagcgcaggt 210 |||||| |||||| Sbjct: 34932347 atgcagtgcaggt 34932359 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 26777401 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 26777342 Query: 199 tgcagcgcaggtc 211 ||||| ||||||| Sbjct: 26777341 tgcagtgcaggtc 26777329 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| ||||| |||||||||||||||||||| Sbjct: 26775791 caggtcctgttggtgaagacatgttccactggcaggc 26775755 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 34933002 attcatttccccccggactaccccttcaagcctccaaaggt 34933042 Score = 48.1 bits (24), Expect = 0.019 Identities = 96/120 (80%) Strand = Plus / Plus Query: 207 aggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggagag 266 |||||||| |||||||| |||||||| |||||||| ||||| ||||| || | || || Sbjct: 34911609 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 34911668 Query: 267 cccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttcaa 326 || | | |||||| | || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 34911669 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 34911728 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 ccgttcaccggtggtctatttttg 291 ||||||||||| |||||||||||| Sbjct: 11607879 ccgttcaccggaggtctatttttg 11607856
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 ||||||||| ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 40304 catggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 40363 Query: 198 atgcagcgcaggt 210 |||||| |||||| Sbjct: 40364 atgcagtgcaggt 40376 Score = 65.9 bits (33), Expect = 8e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||| ||||||||||||| || |||||||||||||| || ||||| || || Sbjct: 61651 catggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatc 61710 Query: 198 atgcagcgcaggt 210 |||||| |||||| Sbjct: 61711 atgcagtgcaggt 61723 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 62366 attcatttccccccggactaccccttcaagcctccaaaggt 62406 Score = 48.1 bits (24), Expect = 0.019 Identities = 96/120 (80%) Strand = Plus / Plus Query: 207 aggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggccctcggagag 266 |||||||| |||||||| |||||||| |||||||| ||||| ||||| || | || || Sbjct: 40973 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 41032 Query: 267 cccgttcaccggtggtctatttttggtcaacattcatttcccaccggattaccccttcaa 326 || | | |||||| | || ||||| || ||||||||||| ||||| ||||||||||| Sbjct: 41033 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 41092
>ref|NM_124709.2| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.2 mRNA, complete cds Length = 837 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 103 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 162 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 163 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 206 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 265 catttccctccggattacccattcaagcctcctaaggt 302
>ref|NM_180850.1| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.1 mRNA, complete cds Length = 856 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 122 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 181 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 182 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 225 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 284 catttccctccggattacccattcaagcctcctaaggt 321
>emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin conjugating enzyme homolog Length = 818 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 133 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 192 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 193 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 236 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 295 catttccctccggattacccattcaagcctcctaaggt 332
>gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 478 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggt 200
>gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conjugating enzyme 11 (UBC11) (At3g08690) mRNA, complete cds Length = 478 Score = 71.9 bits (36), Expect = 1e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 1 atggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaac 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| ||||| || | ||||||||||||||| ||||| ||||| |||||||| Sbjct: 61 tgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatggg 116
>gb|AF326872.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 768 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 95 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 154 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 155 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 198 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 257 catttccctccggattacccattcaagcctcctaaggt 294
>gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 447 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggt 200
>gb|AY065059.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 752 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 95 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 154 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 155 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 198 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 257 catttccctccggattacccattcaagcctcctaaggt 294
>gb|AY039566.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 713 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 99 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 158 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 159 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 202 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 261 catttccctccggattacccattcaagcctcctaaggt 298
>gb|AF325005.2|AF325005 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 731 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 90 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 149 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 150 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 193 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 252 catttccctccggattacccattcaagcctcctaaggt 289
>gb|AF324718.2|AF324718 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 748 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 91 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 150 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 151 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 194 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 253 catttccctccggattacccattcaagcctcctaaggt 290
>emb|BX829864.1|CNS0A1IT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 76 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 135 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 136 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 179 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 238 catttccctccggattacccattcaagcctcctaaggt 275
>gb|AY086447.1| Arabidopsis thaliana clone 25162 mRNA, complete sequence Length = 743 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 99 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 158 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 159 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 202 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 261 catttccctccggattacccattcaagcctcctaaggt 298
>gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08690) mRNA, complete cds Length = 447 Score = 71.9 bits (36), Expect = 1e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 1 atggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaac 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| ||||| || | ||||||||||||||| ||||| ||||| |||||||| Sbjct: 61 tgcagcgctggtccggtggctgaggacatgttccattggcaagccactatcatggg 116
>gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (At5g53300) mRNA, complete cds Length = 447 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 1 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 60 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 61 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 104 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 163 catttccctccggattacccattcaagcctcctaaggt 200
>gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 818 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 133 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 192 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 193 tgtagcgcaggtcctgttgctgaagacatgtttcactggcaggc 236 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 295 catttccctccggattacccattcaagcctcctaaggt 332
>gb|AY702915.1|AY702915S1 Pisum sativum ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 236 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 52 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 111 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 112 cctgcagcgcaggtccggttgccgaagacatgttccattggca 154
>gb|AY683451.1| Lemna minor ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 178 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 33 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 92 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 93 cctgcagcgcaggtccggttgccgaagacatgttccattggca 135
>gb|DQ118119.1|DQ118119S1 Lupinus albus ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 178 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 145 tccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagc 204 |||||| |||||||||||||||| ||||| ||||||| |||||||| || || ||||| Sbjct: 1 tccaagcggatcctcaaggagctcaaggatttgcagaaagaccctcctacatcttgcagt 60 Query: 205 gcaggtcctgtaggtgaggacatgttccactggca 239 |||||||| || | ||| |||||||| || ||||| Sbjct: 61 gcaggtccggtcgctgaagacatgtttcattggca 95
>gb|L29077.1|PEAUBC4 Pisum sativum ubiquitin conjugating enzyme (UBC4), complete cds Length = 909 Score = 69.9 bits (35), Expect = 5e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 137 ccatggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacct 196 ||||||| |||||| | |||||||||||||| |||||| ||||||| || || || || | Sbjct: 170 ccatggcttccaagcgcatcctcaaggagctcaaggacttgcagaaagatccacctacgt 229 Query: 197 catgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 | |||||||||||||| || | || ||||||||||| ||||| Sbjct: 230 cctgcagcgcaggtccggttgccgaagacatgttccattggca 272
>ref|XM_519070.1| PREDICTED: Pan troglodytes similar to ubiquitin-conjugating enzyme HBUCE1 (LOC463379), mRNA Length = 614 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 82 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 131
>gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 169 aaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatg 228 |||||| ||||||| || ||||| || |||||||| ||||||||| || ||||| ||| Sbjct: 133 aaggacttgcagaaagatcctccgacatcatgcagtgcaggtccttctggcgaggatatg 192 Query: 229 ttccactggcaggccaccatcatggg 254 ||||| |||||||| ||||||||||| Sbjct: 193 ttccattggcaggcaaccatcatggg 218
>emb|CR608137.1| full-length cDNA clone CS0DI034YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 128 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 177
>dbj|AK001446.1| Homo sapiens cDNA FLJ10584 fis, clone NT2RP2003737, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19) Length = 1398 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 152 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 201
>gb|BC004104.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative), mRNA (cDNA clone MGC:10513 IMAGE:3835609), complete cds Length = 1415 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 156 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 205
>gb|AF125044.1|AF125044 Homo sapiens ubiquitin-conjugating enzyme HBUCE1 mRNA, complete cds Length = 1471 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 203 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 252
>ref|NM_015983.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative) (UBE2D4), mRNA Length = 1398 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 152 gcaggacctgtcggtgatgacttgttccactggcaggccaccatcatggg 201
>ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 158 tcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtag 217 |||||||||| |||||||| |||| ||| || || || || |||||||| || ||||| Sbjct: 107 tcaaggagctcaaggaccttcagagggatccgccgacttcctgcagcgccgggcctgtgt 166 Query: 218 gtgaggacatgttccactggcaggccaccatcatggggccc 258 ||| ||||||||||||||||| || || |||||||||||| Sbjct: 167 ctgatgacatgttccactggcaagcaacaatcatggggccc 207
>ref|NM_192451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 65.9 bits (33), Expect = 8e-08 Identities = 86/104 (82%), Gaps = 6/104 (5%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 460 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 519 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 ||||| |||||| ||||| |||||||||||||||||||| Sbjct: 520 tgcag------tcctgttggtgaagacatgttccactggcaggc 557
>gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, complete sequence Length = 709 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctc 197 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| | Sbjct: 103 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctccttcaaa 162 Query: 198 atgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||||| ||||| || | ||||||||||||||| ||||| || || |||||||| Sbjct: 163 ctgcagcgctggtccggtggctgaggacatgttccattggcaagcaactatcatggg 219
>dbj|AK120237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043N18, full insert sequence Length = 815 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 158 tcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtag 217 |||||||||| |||||||| |||| ||| || || || || |||||||| || ||||| Sbjct: 107 tcaaggagctcaaggaccttcagagggatccgccgacttcctgcagcgccgggcctgtgt 166 Query: 218 gtgaggacatgttccactggcaggccaccatcatggggccc 258 ||| ||||||||||||||||| || || |||||||||||| Sbjct: 167 ctgatgacatgttccactggcaagcaacaatcatggggccc 207
>ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.2 mRNA, complete cds Length = 909 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 198 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 257 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 258 gaagacatgtttcattggca 277
>ref|NM_180785.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.3 mRNA, complete cds Length = 1006 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 102 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 161 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 162 gaagacatgtttcattggca 181
>ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.1 mRNA, complete cds Length = 864 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 153 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 212 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 213 gaagacatgtttcattggca 232
>gb|AY491500.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 779 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 ||||| || |||||||| ||||| || ||||| ||||| ||||| |||||||| || || Sbjct: 67 aaggaactcaaggacctccagaaagatcctcctacctcttgcagtgcaggtcccgtcgga 126 Query: 220 gaggacatgttccactggca 239 ||||||||||| |||||||| Sbjct: 127 gaggacatgtttcactggca 146
>emb|X73419.1|LEUBC L.esculentum mRNA for ubiquitin conjugating enzyme E2 Length = 686 Score = 63.9 bits (32), Expect = 3e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| |||||| |||| ||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 13 atggcatccaagcggattctcaaggagcttaaggatctccagaaagatcctcctacctct 72 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| || || || |||| ||| || |||||||| ||||| || || |||||||| Sbjct: 73 tgcagtgctggcccagtagctgaagatatgttccattggcaagcaacaatcatggg 128
>gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 8 (At5g41700) mRNA, complete cds Length = 478 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC8 (At5g41700) mRNA, complete cds Length = 810 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 147 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 206 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 207 gaagacatgtttcattggca 226
>gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (MBK23.24) mRNA, complete cds Length = 476 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA, complete cds Length = 653 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 88 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 147 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 148 gaagacatgtttcattggca 167
>gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (MBK23.24) mRNA, complete cds Length = 755 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 198 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 257 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 258 gaagacatgtttcattggca 277
>gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g41700/MBK23_24) mRNA, complete cds Length = 667 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 93 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 152 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 153 gaagacatgtttcattggca 172
>emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 650 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 72 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 131 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 132 gaagacatgtttcattggca 151
>emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| ||| ||||| | ||||| ||||||| || |||||||| || || || ||| Sbjct: 88 atggcgtcgaagcggatcttgaaggaattgaaggatctccagaaggatccacctacatca 147 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggcaggc 242 || ||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 148 tgtggcgcaggtcctgttgctgaagacatgtttcactggcaggc 191 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 250 catttccctccggattacccattcaagcctcctaaggt 287
>gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, complete sequence Length = 747 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 153 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 212 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 213 gaagacatgtttcattggca 232
>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete cds, clone: RAFL16-95-M21 Length = 2157 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 88 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 147 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 148 gaagacatgtttcattggca 167
>gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41700) mRNA, complete cds Length = 447 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||| || | | Sbjct: 22 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggtccagttgct 81 Query: 220 gaggacatgttccactggca 239 || |||||||| || ||||| Sbjct: 82 gaagacatgtttcattggca 101
>ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.1 mRNA, complete cds Length = 686 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 108 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 167 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 168 tgtttcattggcaggccactataatgggtccatcggatagccc 210
>ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.2 mRNA, complete cds Length = 896 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 246 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 305 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 306 tgtttcattggcaggccactataatgggtccatcggatagccc 348
>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence Length = 194704 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 204 cgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||| ||||| ||||| ||| ||||||||||||||||||||||| |||| Sbjct: 158227 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 158177
>ref|XM_905852.2| PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC546638), mRNA Length = 327 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 204 cgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||| ||||| ||||| ||| ||||||||||||||||||||||| |||| Sbjct: 66 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 116
>ref|XM_621400.3| PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 4 (putative) (LOC546638), mRNA Length = 327 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 204 cgcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggg 254 |||||| ||||| ||||| ||| ||||||||||||||||||||||| |||| Sbjct: 66 cgcaggacctgtgggtgatgacttgttccactggcaggccaccatcctggg 116
>gb|AY142644.1| Arabidopsis thaliana E2 ubiquitin-conjugating enzyme 9 (UBC9) (At4g27960) mRNA, complete cds Length = 478 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 29 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 88 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 89 tgtttcattggcaggccactataatgggtccatcggatagccc 131
>emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conjugating enzyme homolog Length = 687 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 79 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 138 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 139 tgtttcattggcaggccactataatgggtccatcggatagccc 181
>gb|AY080741.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC9 (At4g27960) mRNA, complete cds Length = 688 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 105 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 164 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 165 tgtttcattggcaggccactataatgggtccatcggatagccc 207
>emb|X72626.1|ATUCEE2B A.thaliana UbcAT4b mRNA for ubiquitin conjugating enzyme E2 Length = 643 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 63 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 122 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 123 tgtttcattggcaggccactataatgggtccatcggatagccc 165
>gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g27960/T13J8_70) mRNA, complete cds Length = 896 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 246 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 305 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 306 tgtttcattggcaggccactataatgggtccatcggatagccc 348
>dbj|AB125882.1| Ipomoea batatas SRF3 mRNA for ubiquitin-conjugating enzyme-like protein Length = 979 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgc 206 |||||||| ||||| |||||||||||||||||||| | ||||||||| Sbjct: 591 aaggagctcaaggatctgcagaaggaccctcccacattatgcagcgc 637
>gb|DQ027023.1| Arabidopsis thaliana ubiquitinating enzyme (At4g27960) mRNA, complete cds Length = 537 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 119 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 178 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 179 tgtttcattggcaggccactataatgggtccatcggatagccc 221
>gb|L00639.1|ATHUBCB Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 658 Score = 61.9 bits (31), Expect = 1e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggaca 226 ||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |||| Sbjct: 79 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggacccgttgcggaagaca 138 Query: 227 tgttccactggcaggccaccatcatggggccctcggagagccc 269 |||| || ||||||||||| || ||||| || ||||| ||||| Sbjct: 139 tgtttcattggcaggccactataatgggtccatcggatagccc 181
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 13050 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 12991 Query: 199 tgcagcgcaggtc 211 ||||| ||||||| Sbjct: 12990 tgcagtgcaggtc 12978 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| ||||| |||||||||||||||||||| Sbjct: 11440 caggtcctgttggtgaagacatgttccactggcaggc 11404
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||| |||||||| | |||||||| ||||| ||||||||||| || || || ||| Sbjct: 124493 atggcgtcaaagaggatacagaaggagctcaaggatctgcagaaggatccccctacatca 124434 Query: 199 tgcagcgcaggtc 211 ||||| ||||||| Sbjct: 124433 tgcagtgcaggtc 124421 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| ||||| |||||||||||||||||||| Sbjct: 122883 caggtcctgttggtgaagacatgttccactggcaggc 122847
>emb|AJ298327.1|PFL298327 Platichthys flesus partial mRNA for putative ubiquitin-conjugating enzyme (ubc gene) Length = 296 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 211 cctgtaggtgaggacatgttccactggcaggccaccatca 250 |||||||| ||||||||||| |||||||| |||||||||| Sbjct: 53 cctgtaggagaggacatgtttcactggcaagccaccatca 92
>gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, complete sequence Length = 159507 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 227 tgttccactggcaggccaccatcatggg 254 |||||||||||||||||||||||||||| Sbjct: 22574 tgttccactggcaggccaccatcatggg 22547
>gb|AY105836.1| Zea mays PCO130472 mRNA sequence Length = 915 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 175 ctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccac 234 ||||| |||||||| || || |||||||| ||||| |||| || ||||| | |||||| Sbjct: 249 ctgcaaaaggacccaccgacatcatgcagtgcagggcctgctggagaggatctattccac 308 Query: 235 tggcaggccaccatcatggg 254 ||||||||||| |||||||| Sbjct: 309 tggcaggccacaatcatggg 328
>emb|BX537878.1|HSM805984 Homo sapiens mRNA; cDNA DKFZp686A08114 (from clone DKFZp686A08114) Length = 6486 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 227 tgttccactggcaggccaccatcatggg 254 |||||||||||||||||||||||||||| Sbjct: 4535 tgttccactggcaggccaccatcatggg 4508
>gb|AY684132.1| Vitis vinifera ubiquitin-conjugating enzyme mRNA, partial cds Length = 133 Score = 54.0 bits (27), Expect = 3e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 145 tccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctcatgcagc 204 |||||| | |||||||||||||| ||||| || ||||| || ||||| || || ||||| Sbjct: 1 tccaagcgcatcctcaaggagctcaaggatctccagaaagatcctccgacatcttgcagt 60 Query: 205 gcaggtcctgtaggtgaggacatgttccactggca 239 || || ||||| | ||| ||||||||||| ||||| Sbjct: 61 gctggccctgttgctgaagacatgttccattggca 95
>emb|Z14989.1|ATUBC8 A.thaliana UBC8 gene for ubiquitin conjugating enzyme homolog Length = 1447 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 210 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 148 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 198
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 210 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 71048 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 71098
>gb|L00638.1|ATHUBCA Arabidopsis thaliana ubiquitin conjugating enzyme exons 2-4 Length = 1447 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 210 |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| Sbjct: 148 aaggagctgaaggatctccagaaagaccctccaacctcctgcagtgcaggt 198
>gb|AC155162.5| Mus musculus BAC clone RP24-421I19 from chromosome 16, complete sequence Length = 200912 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 228 gttccactggcaggccaccatcatgg 253 |||||||||||||||||||||||||| Sbjct: 119755 gttccactggcaggccaccatcatgg 119780
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 138 catggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcc 191 |||||| || ||||||||| | |||||||| ||||| ||||||||||| ||||| Sbjct: 52409 catggcttctaagaggatcttgaaggagctcaaggatctgcagaaggatcctcc 52462 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 219 tgaggacatgttccactggcaggccaccatcatggg 254 ||||||||||||||| ||||| ||||| |||||||| Sbjct: 52858 tgaggacatgttccattggcaagccactatcatggg 52893 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 52937 attcatttccctccggattatcctttcaagccaccaaaggt 52977
>gb|AY489135.1| Capsicum annuum ubiquitin-conjugating enzyme 8 mRNA, complete cds Length = 713 Score = 50.1 bits (25), Expect = 0.005 Identities = 82/101 (81%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 60 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 119 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 ||||| || || ||||| | ||| || ||||| |||||||| Sbjct: 120 tgcagtgctggccctgttgctgaagatatgtttcactggca 160
>ref|XM_850927.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 6 (LOC612742), mRNA Length = 2283 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 366 attcatttcccaacagattaccccttcaagccacctaaggt 406
>ref|XM_850890.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 5 (LOC612742), mRNA Length = 2703 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 786 attcatttcccaacagattaccccttcaagccacctaaggt 826 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 693 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 745
>ref|XM_850849.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 4 (LOC612742), mRNA Length = 2324 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>ref|XM_850803.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 3 (LOC612742), mRNA Length = 1121 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>ref|XM_843232.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 1 (LOC612742), mRNA Length = 1113 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 |||||||||||| | ||||||||||||||||| || ||||| Sbjct: 567 attcatttcccaacagattaccccttcaagccacctaaggt 607 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 474 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 526
>gb|AF424641.1| Phytophthora infestans clone MY-03-C-08 ubiquitin-conjugating enzyme mRNA, complete cds Length = 691 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccctcggagagcccgt 271 |||||||||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 133 tgttccactggcaggcgaccatcatgggccccgaggacagcccgt 177
>gb|DQ249816.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 678 Score = 50.1 bits (25), Expect = 0.005 Identities = 82/101 (81%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 71 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 130 Query: 199 tgcagcgcaggtcctgtaggtgaggacatgttccactggca 239 ||||| || || ||||| | ||| || ||||| |||||||| Sbjct: 131 tgcagtgctggccctgttgctgaagatatgtttcactggca 171
>ref|XM_370047.1| Magnaporthe grisea 70-15 hypothetical protein (MG06562.4) partial mRNA Length = 465 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 316 taccccttcaagcccccgaaggtc 339 |||||||||||||||||||||||| Sbjct: 199 taccccttcaagcccccgaaggtc 222
>gb|BC019464.1| Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), mRNA (cDNA clone MGC:28550 IMAGE:4205941), complete cds Length = 1427 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 198 tgttccactggcaagcaaccatcatggggccc 229
>gb|BT013204.1| Lycopersicon esculentum clone 134378F, mRNA sequence Length = 774 Score = 48.1 bits (24), Expect = 0.019 Identities = 66/80 (82%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggt 219 |||||||| |||||||| ||||| || ||||| || || || ||||| || || || || Sbjct: 66 aaggagcttaaggaccttcagaaagatcctcctacttcttgtagcgctggccccgtcgga 125 Query: 220 gaggacatgttccactggca 239 ||||||||||| |||||||| Sbjct: 126 gaggacatgtttcactggca 145
>gb|AC148404.7| Medicago truncatula clone mth2-28d4, complete sequence Length = 111252 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcc 191 |||||| |||||||||||||||| |||||||| Sbjct: 90193 aaggagttgaaggacctgcagaaagaccctcc 90224
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 48.1 bits (24), Expect = 0.019 Identities = 39/44 (88%) Strand = Plus / Minus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 210 ||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 32658 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggt 32615
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 48.1 bits (24), Expect = 0.019 Identities = 39/44 (88%) Strand = Plus / Minus Query: 167 tgaaggacctgcagaaggaccctcccacctcatgcagcgcaggt 210 ||||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct: 27522 tgaaggatctgcagaaggatcctcctacttcatgtagcgcaggt 27479
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence Length = 122590 Score = 48.1 bits (24), Expect = 0.019 Identities = 60/72 (83%) Strand = Plus / Minus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 |||||||||||||| || | |||||||| |||||| |||||| || || || |||||| Sbjct: 97644 atggcgtccaagagaatagttaaggagcttaaggacttgcagagagatccaccaacctca 97585 Query: 199 tgcagcgcaggt 210 ||||| |||||| Sbjct: 97584 tgcagtgcaggt 97573
>dbj|AK144468.1| Mus musculus adult male accessory axillary lymph node cDNA, RIKEN full-length enriched library, clone:G630075H02 product:ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), full insert sequence Length = 1380 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 182 tgttccactggcaagcaaccatcatggggccc 213
>dbj|AK148364.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370114C01 product:ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), full insert sequence Length = 1416 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 215 tgttccactggcaagcaaccatcatggggccc 246
>dbj|AK043167.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730062O07 product:similar to UBIQUITIN CONJUGATING ENZYME (FRAGMENT) [Sus scrofa], full insert sequence Length = 3158 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 183 tgttccactggcaagcaaccatcatggggccc 214
>gb|AY082004.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) mRNA, complete cds Length = 773 Score = 48.1 bits (24), Expect = 0.019 Identities = 54/64 (84%) Strand = Plus / Plus Query: 176 tgcagaaggaccctcccacctcatgcagcgcaggtcctgtaggtgaggacatgttccact 235 |||| ||||| || ||||| || ||||| ||||||||||||| ||| |||||||| || | Sbjct: 227 tgcaaaaggatccacccacttcttgcagtgcaggtcctgtagctgaagacatgtttcatt 286 Query: 236 ggca 239 |||| Sbjct: 287 ggca 290
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 223 gacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| || || |||||||||||| Sbjct: 31296 gacatgttccactggcaagcaacaatcatggggccc 31331
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 223 gacatgttccactggcaggccaccatcatggggccc 258 ||||||||||||||||| || || |||||||||||| Sbjct: 67480 gacatgttccactggcaagcaacaatcatggggccc 67515
>gb|AF161722.1|AF161722 Magnaporthe grisea ubiquitin-conjugating protein (Ubc1) gene, complete cds Length = 2239 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 316 taccccttcaagcccccgaaggtc 339 |||||||||||||||||||||||| Sbjct: 978 taccccttcaagcccccgaaggtc 1001
>gb|AC153509.3| Mus musculus 10 BAC RP23-60H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192528 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 72040 tgttccactggcaagcaaccatcatggggccc 72071
>emb|AJ718680.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-23-270, cultivar Bright Yellow 2 Length = 225 Score = 48.1 bits (24), Expect = 0.019 Identities = 94/119 (78%) Strand = Plus / Plus Query: 220 gaggacatgttccactggcaggccaccatcatggggccctcggagagcccgttcaccggt 279 ||||| |||||||| ||||| || || ||||||||||| | || ||||| | | || Sbjct: 19 gaggatatgttccattggcangctacaatcatggggcctacaganagcccttangctggn 78 Query: 280 ggtctatttttggtcaacattcatttcccaccggattaccccttcaagcccccgaaggt 338 ||| |||||||||| ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 79 ggtgtatttttggttncaattcatttccctccggattatcctttcaagcctccaaaggt 137
>ref|NM_145420.1| Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (Ube2d1), mRNA Length = 1427 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||||| || ||||||||||||||| Sbjct: 198 tgttccactggcaagcaaccatcatggggccc 229
>ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.4 mRNA, complete cds Length = 803 Score = 46.1 bits (23), Expect = 0.076 Identities = 38/43 (88%) Strand = Plus / Plus Query: 160 aaggagctgaaggacctgcagaaggaccctcccacctcatgca 202 |||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 89 aaggagctgaaggatctccagaaagaccctccaacctcctgca 131
>ref|XM_513119.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ10521 (LOC456533), mRNA Length = 4239 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2597 aggagctgcaggacctgcagaaggacc 2623
>ref|NM_001011722.2| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like (ARHGEF10L), transcript variant 2, mRNA Length = 4269 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1887 aggagctgcaggacctgcagaaggacc 1913
>ref|NM_018125.3| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like (ARHGEF10L), transcript variant 1, mRNA Length = 4502 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2120 aggagctgcaggacctgcagaaggacc 2146
>gb|DQ139833.1| Homo sapiens Rho-specific guanine nucleotide exchange factor GrinchGEF mRNA, complete cds Length = 4198 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1829 aggagctgcaggacctgcagaaggacc 1855
>ref|XM_991413.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA Length = 4504 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2080 aggagctgcaggacctgcagaaggacc 2106
>ref|XM_544536.2| PREDICTED: Canis familiaris similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1, transcript variant 1 (LOC487411), mRNA Length = 3174 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1283 aggagctgcaggacctgcagaaggacc 1309
>ref|XM_859488.1| PREDICTED: Canis familiaris similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1, transcript variant 2 (LOC487411), mRNA Length = 2964 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1073 aggagctgcaggacctgcagaaggacc 1099
>emb|AL358593.22| Human DNA sequence from clone RP11-473A10 on chromosome 1 Contains the 3' end of the gene for a novel protein (KIAA1626, FLJ34701, FLJ44929, FLJ10521) and the 5' end of a novel gene, complete sequence Length = 142454 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 52974 aggagctgcaggacctgcagaaggacc 53000
>emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin conjugating enzyme homolog Length = 543 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggtctcttt 344 ||||||||||| |||||||| || |||||||| || ||||| ||||| Sbjct: 70 attcatttccctccggattatcctttcaagccaccaaaggtgtcttt 116
>gb|BC021843.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4016433), partial cds Length = 2598 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 276 aggagctgcaggacctgcagaaggacc 302
>gb|BC059220.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone MGC:66605 IMAGE:6417641), complete cds Length = 4513 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2094 aggagctgcaggacctgcagaaggacc 2120
>gb|BC034061.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4166618) Length = 3679 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1267 aggagctgcaggacctgcagaaggacc 1293
>emb|CR860834.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1814 (from clone DKFZp469F1814) Length = 4374 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1987 aggagctgcaggacctgcagaaggacc 2013
>gb|BC080596.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4589063), partial cds Length = 2891 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 783 aggagctgcaggacctgcagaaggacc 809
>gb|BC065561.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:6144815), partial cds Length = 3009 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 622 aggagctgcaggacctgcagaaggacc 648
>dbj|AK126877.1| Homo sapiens cDNA FLJ44929 fis, clone BRAMY3015547, weakly similar to Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10 (ARHGEF10) Length = 4586 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2226 aggagctgcaggacctgcagaaggacc 2252
>dbj|AK092020.1| Homo sapiens cDNA FLJ34701 fis, clone MESAN2002724, weakly similar to Rho guanine nucleotide exchange factor (GEF) 10 Length = 3476 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1108 aggagctgcaggacctgcagaaggacc 1134
>dbj|AK028648.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732426B21 product:hypothetical Dbl domain (dbl/cdc24 rhoGEF family) containing protein, full insert sequence Length = 4204 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2014 aggagctgcaggacctgcagaaggacc 2040
>dbj|AK028570.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732402F20 product:hypothetical DBL homology domain structure containing protein, full insert sequence Length = 3751 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1447 aggagctgcaggacctgcagaaggacc 1473
>dbj|AB047595.1| Macaca fascicularis brain cDNA, clone:QnpA-11607, similar to human hypothetical protein FLJ1052, mRNA, NM_018125 Length = 2366 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1848 aggagctgcaggacctgcagaaggacc 1874
>ref|NM_172415.2| Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA Length = 4513 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2094 aggagctgcaggacctgcagaaggacc 2120
>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete sequence Length = 202551 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Minus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 30024 aggagctgcaggacctgcagaaggacc 29998
>dbj|AK129408.1| Mus musculus mRNA for mKIAA1626 protein Length = 4297 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1989 aggagctgcaggacctgcagaaggacc 2015
>gb|BC111058.1| Homo sapiens cDNA clone IMAGE:5745823, with apparent retained intron Length = 4973 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 1792 aggagctgcaggacctgcagaaggacc 1818
>gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, 3' end Length = 543 Score = 46.1 bits (23), Expect = 0.076 Identities = 41/47 (87%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggtctcttt 344 ||||||||||| |||||||| || |||||||| || ||||| ||||| Sbjct: 70 attcatttccctccggattatcctttcaagccaccaaaggtgtcttt 116
>dbj|AB046846.1| Homo sapiens mRNA for KIAA1626 protein, partial cds Length = 4489 Score = 46.1 bits (23), Expect = 0.076 Identities = 26/27 (96%) Strand = Plus / Plus Query: 161 aggagctgaaggacctgcagaaggacc 187 |||||||| |||||||||||||||||| Sbjct: 2120 aggagctgcaggacctgcagaaggacc 2146
>gb|DQ207855.1| Solanum tuberosum clone 078A09 ubiquitin-conjugating enzyme 8-like mRNA, complete cds Length = 757 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Plus Query: 139 atggcgtccaagaggatcctcaaggagctgaaggacctgcagaaggaccctcccacctca 198 ||||| ||||||||||| || || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 64 atggcatccaagaggattctgaaagagctcaaggatctccagaaagatcctcctacctct 123 Query: 199 tgcagcgcaggtcc 212 ||||| || ||||| Sbjct: 124 tgcagtgctggtcc 137
>ref|XM_502855.1| Yarrowia lipolytica CLIB122, YALI0D15312g predicted mRNA Length = 444 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccctc 260 |||||||||||||||| || |||||||| ||||| Sbjct: 89 tgttccactggcaggctactatcatgggcccctc 122
>gb|BT009605.1| Triticum aestivum clone wre1n.pk0086.d1:fis, full insert mRNA sequence Length = 832 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 292 gtcaacattcatttcccaccggattaccccttcaagcc 329 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 244 gtcaacatccatttccctcctgattacccctttaagcc 281 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 ttccactggcaggccaccatcatggg 254 ||||||||||||||||| |||||||| Sbjct: 181 ttccactggcaggccacaatcatggg 206
>gb|AY148222.1| Sus scrofa E2 ubiquitin-conjugating enzyme UbcH5B (UBCH5B) mRNA, partial cds Length = 314 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggtc 339 |||||||||||| | |||||||||||||| || || |||||| Sbjct: 127 attcatttcccaacagattaccccttcaaaccacctaaggtc 168
>gb|AF461687.1| Pinus pinaster putative ubiquitin mRNA, partial cds Length = 424 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 gattaccccttcaagcccccgaaggt 338 |||||||||||||||||||| ||||| Sbjct: 152 gattaccccttcaagcccccaaaggt 177
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Minus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 47659 catttccctccggattacccattcaagcctcctaaggt 47622 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 47754 caggtcctgttgctgaagacatgtttcactggcaggc 47718
>emb|Z14993.1|ATUBC12 A.thaliana UBC12 gene Length = 1010 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 521 catttccctccggattacccattcaagcctcctaaggt 558 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 426 caggtcctgttgctgaagacatgtttcactggcaggc 462
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 227 tgttccactggcaggccaccatcatggggccctc 260 |||||||||||||||| || |||||||| ||||| Sbjct: 1866805 tgttccactggcaggctactatcatgggcccctc 1866772
>gb|L00642.1|ATHUBCE Arabidopsis thaliana ubiquitin conjugating enzyme gene, exons 1-4 Length = 1010 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggt 338 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 521 catttccctccggattacccattcaagcctcctaaggt 558 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 206 caggtcctgtaggtgaggacatgttccactggcaggc 242 |||||||||| | ||| |||||||| ||||||||||| Sbjct: 426 caggtcctgttgctgaagacatgtttcactggcaggc 462
>ref|NM_200959.2| Danio rerio zgc:55886 (zgc:55886), mRNA Length = 1935 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| || |||||||| |||||||||||||| || ||||| Sbjct: 323 gtaggggatgacatgtttcactggcaggccacaataatggg 363
>ref|XM_517968.1| PREDICTED: Pan troglodytes similar to ubiquitin conjugating enzyme (LOC462108), mRNA Length = 1304 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 577 attcatttcccaacagattaccccttcaa 605
>ref|NM_181838.1| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2), transcript variant 2, mRNA Length = 2879 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 950 attcatttcccaacagattaccccttcaa 978
>ref|NM_003339.2| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2), transcript variant 1, mRNA Length = 2715 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 786 attcatttcccaacagattaccccttcaa 814
>ref|NM_199571.1| Danio rerio zgc:56340 (zgc:56340), mRNA Length = 1135 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 ttccactggcaggccaccatcatggggcc 257 |||||||||||||| || ||||||||||| Sbjct: 344 ttccactggcaggcaacaatcatggggcc 372
>ref|NM_028502.2| Mus musculus RIKEN cDNA 1700013N18 gene (1700013N18Rik), mRNA Length = 1544 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| |||||||| || || ||||||||||| Sbjct: 299 gcaggtcctgtcggggaagatatgtttcactggcaagctacaatcatggggcc 351
>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence Length = 139563 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 131495 attcatttcccaacagattaccccttcaa 131523
>gb|BC047863.1| Danio rerio zgc:56340, mRNA (cDNA clone MGC:56340 IMAGE:5604009), complete cds Length = 1135 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 ttccactggcaggccaccatcatggggcc 257 |||||||||||||| || ||||||||||| Sbjct: 344 ttccactggcaggcaacaatcatggggcc 372
>ref|XM_614060.2| PREDICTED: Bos taurus similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 1 (LOC541003), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 539 attcatttcccaacagattaccccttcaa 567
>ref|XM_878133.1| PREDICTED: Bos taurus similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 2 (LOC541003), mRNA Length = 2196 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 539 attcatttcccaacagattaccccttcaa 567
>ref|NM_019912.1| Mus musculus ubiquitin-conjugating enzyme E2D 2 (Ube2d2), mRNA Length = 2410 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 546 attcatttcccaacagattaccccttcaa 574
>gb|BC048896.1| Danio rerio zgc:55886, mRNA (cDNA clone MGC:55886 IMAGE:3818716), complete cds Length = 1796 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| || |||||||| |||||||||||||| || ||||| Sbjct: 265 gtaggggatgacatgtttcactggcaggccacaataatggg 305
>ref|XM_454516.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E12595g predicted mRNA Length = 447 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggtctctttc 345 ||||||||| | |||||||||||||| || || ||| |||||||| Sbjct: 166 catttcccaacagattaccccttcaaaccaccaaagatctctttc 210
>gb|AY651263.1| Homo sapiens ubiquitin-conjugating enzyme E2 D2 transcript variant 1 mRNA, complete cds Length = 1715 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 542 attcatttcccaacagattaccccttcaa 570
>gb|BC003923.1| Mus musculus ubiquitin-conjugating enzyme E2D 2, mRNA (cDNA clone MGC:7285 IMAGE:3485259), complete cds Length = 924 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 571 attcatttcccaacagattaccccttcaa 599
>gb|AY486137.1| Capsicum annuum ubiquitin-conjugating protein mRNA, complete cds Length = 578 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaagcccccgaaggt 338 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 92 attcatttccctccggattatcctttcaagcctccaaaggt 132
>ref|XM_850719.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 2 (LOC612742), mRNA Length = 243 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| |||||||| || || |||||||| Sbjct: 129 gcaggtcctgttggagatgatatgttccattggcaggctacaataatggggcc 181
>gb|BC114654.1| Bos taurus cDNA clone MGC:138112 IMAGE:8082521, complete cds Length = 1851 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 647 attcatttcccaacagattaccccttcaa 675
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 catttcccaccggattaccccttcaagcccccgaaggtctctttc 345 ||||||||| | |||||||||||||| || || ||| |||||||| Sbjct: 1117460 catttcccaacagattaccccttcaaaccaccaaagatctctttc 1117504
>gb|BC033349.1| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), transcript variant 1, mRNA (cDNA clone MGC:42697 IMAGE:4827210), complete cds Length = 1979 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 786 attcatttcccaacagattaccccttcaa 814
>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13, complete sequence Length = 186151 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 ttccactggcaggccaccatcatggggcc 257 |||||||||||||| || ||||||||||| Sbjct: 76415 ttccactggcaggcaacaatcatggggcc 76443
>gb|BC065678.1| Danio rerio zgc:55886, mRNA (cDNA clone MGC:77149 IMAGE:6961245), complete cds Length = 1935 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| || |||||||| |||||||||||||| || ||||| Sbjct: 323 gtaggggatgacatgtttcactggcaggccacaataatggg 363
>emb|CR623635.1| full-length cDNA clone CS0DF013YF13 of Fetal brain of Homo sapiens (human) Length = 1542 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 416 attcatttcccaacagattaccccttcaa 444
>emb|CR622545.1| full-length cDNA clone CS0DM006YN11 of Fetal liver of Homo sapiens (human) Length = 1579 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 416 attcatttcccaacagattaccccttcaa 444
>emb|CR618308.1| full-length cDNA clone CS0DA012YJ02 of Neuroblastoma of Homo sapiens (human) Length = 1684 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 547 attcatttcccaacagattaccccttcaa 575
>emb|CR611730.1| full-length cDNA clone CS0DF003YM24 of Fetal brain of Homo sapiens (human) Length = 1580 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 408 attcatttcccaacagattaccccttcaa 436
>emb|CR607642.1| full-length cDNA clone CS0DN004YL06 of Adult brain of Homo sapiens (human) Length = 1746 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 605 attcatttcccaacagattaccccttcaa 633
>emb|CR606151.1| full-length cDNA clone CS0DH001YD11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1833 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 674 attcatttcccaacagattaccccttcaa 702
>emb|CR596483.1| full-length cDNA clone CS0DN002YH07 of Adult brain of Homo sapiens (human) Length = 1698 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 555 attcatttcccaacagattaccccttcaa 583
>gb|AF510491.1| Danio rerio ubiquitin conjugating enzyme E2D mRNA, partial cds Length = 469 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 214 gtaggtgaggacatgttccactggcaggccaccatcatggg 254 ||||| || |||||||| |||||||||||||| || ||||| Sbjct: 303 gtaggggatgacatgtttcactggcaggccacaataatggg 343
>emb|CR592107.1| full-length cDNA clone CS0DI014YF13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 897 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 555 attcatttcccaacagattaccccttcaa 583
>emb|CR591688.1| full-length cDNA clone CS0DB009YK19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1690 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 588 attcatttcccaacagattaccccttcaa 616
>dbj|AK001311.1| Homo sapiens cDNA FLJ10449 fis, clone NT2RP1000947, highly similar to Human E2 ubiquitin conjugating enzyme UbcH5B mRNA Length = 1732 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 559 attcatttcccaacagattaccccttcaa 587
>dbj|AK001428.1| Homo sapiens cDNA FLJ10566 fis, clone NT2RP2002959, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19) Length = 2526 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 613 attcatttcccaacagattaccccttcaa 641
>dbj|AB226249.1| Aspergillus oryzae cDNA, contig sequence: AoEST3108 Length = 1024 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 211 cctgtaggtgaggacatgttccactggca 239 ||||||||||| ||| ||||||||||||| Sbjct: 234 cctgtaggtgaagacttgttccactggca 262
>gb|AY291287.1| Bos taurus E2 ubiquitin conjugating enzyme UbcH5B (UBCH5B) mRNA, partial cds Length = 267 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 103 attcatttcccaacagattaccccttcaa 131
>dbj|AK136197.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420474N15 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2363 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 528 attcatttcccaacagattaccccttcaa 556
>dbj|AK133385.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933403P17 product:Ubiquitin-conjugating enzyme E2-17 kDa 4 (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin carrier protein) (E2(17)KB 4) homolog [Rattus norvegicus], full insert sequence Length = 1509 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| |||||||| || || ||||||||||| Sbjct: 282 gcaggtcctgtcggggaagatatgtttcactggcaagctacaatcatggggcc 334
>dbj|AK139623.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020006O10 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2162 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 556 attcatttcccaacagattaccccttcaa 584
>dbj|AK148089.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370013N14 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 1854 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 412 attcatttcccaacagattaccccttcaa 440
>dbj|AK146659.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920039M22 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 3458 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 642 attcatttcccaacagattaccccttcaa 670
>dbj|AK147568.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1080J15 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 8158 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 6276 attcatttcccaacagattaccccttcaa 6304
>dbj|AK162093.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420408P12 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2255 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 395 attcatttcccaacagattaccccttcaa 423
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence Length = 183894 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aaggagctgaaggacctgcag 180 ||||||||||||||||||||| Sbjct: 52386 aaggagctgaaggacctgcag 52366
>dbj|AK160567.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410124B20 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 905 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 563 attcatttcccaacagattaccccttcaa 591
>dbj|AK172088.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830035L19 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2299 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 417 attcatttcccaacagattaccccttcaa 445
>gb|AF317220.1|AF317220 Homo sapiens ubiquitin-conjugating enzyme (PUBC1) mRNA, complete cds Length = 2011 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 94 attcatttcccaacagattaccccttcaa 122
>dbj|AK005969.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700013N18 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 4 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 4) homolog [Rattus norvegicus], full insert sequence Length = 1091 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| |||||||| || || ||||||||||| Sbjct: 300 gcaggtcctgtcggggaagatatgtttcactggcaagctacaatcatggggcc 352
>gb|AC010378.6|AC010378 Homo sapiens chromosome 5 clone CTD-2062A1, complete sequence Length = 137737 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 18147 attcatttcccaacagattaccccttcaa 18119
>dbj|AK005355.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500034D03 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 1693 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 542 attcatttcccaacagattaccccttcaa 570
>ref|NM_031001.2| Rattus norvegicus ubiquitin-conjugating enzyme E2D 2 (Ube2d2), mRNA Length = 1499 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| ||||| || || ||||||||||| Sbjct: 252 gcaggtcctgtcggggaagatatgttccattggcaagctacaatcatggggcc 304
>ref|NM_214563.1| Strongylocentrotus purpuratus bone morphogenetic protein 1 (BMP1), mRNA Length = 2178 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccgactcctctcgctccctct 23 ||||||||||||||||||||| Sbjct: 71 ccgactcctctcgctccctct 51
>dbj|AK219213.1| Mus musculus cDNA, clone:Y2G0147M04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 219 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 187 attcatttcccaacagattaccccttcaa 215
>dbj|AK204863.1| Mus musculus cDNA, clone:Y1G0149N17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 220 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| || |||||||| ||||| |||||||| Sbjct: 95 gcaggtcctgttggagatgatatgtttcattggcaggctaccataatggggcc 147
>dbj|AK199554.1| Mus musculus cDNA, clone:Y1G0131J18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 219 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 187 attcatttcccaacagattaccccttcaa 215
>dbj|AK198040.1| Mus musculus cDNA, clone:Y1G0126P04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 221 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 189 attcatttcccaacagattaccccttcaa 217
>dbj|AK196425.1| Mus musculus cDNA, clone:Y1G0121M23, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 219 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 187 attcatttcccaacagattaccccttcaa 215
>dbj|AK191419.1| Mus musculus cDNA, clone:Y1G0105N06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000061266, based on BLAT search Length = 529 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 497 attcatttcccaacagattaccccttcaa 525
>dbj|AK190235.1| Mus musculus cDNA, clone:Y1G0102C14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000050215, based on BLAT search Length = 219 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 187 attcatttcccaacagattaccccttcaa 215
>dbj|AK187403.1| Mus musculus cDNA, clone:Y0G0141K16, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000020085, based on BLAT search Length = 220 Score = 42.1 bits (21), Expect = 1.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 227 tgttccactggcaggccaccatcatggggccc 258 ||||||||||| | || ||||||||||||||| Sbjct: 22 tgttccactggnaagcaaccatcatggggccc 53
>emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 in linkage group 18, complete sequence Length = 159822 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 229 ttccactggcaggccaccatcatggggcc 257 |||||||||||||| || ||||||||||| Sbjct: 87848 ttccactggcaggcaacaatcatggggcc 87820
>gb|BC078808.1| Rattus norvegicus ubiquitin-conjugating enzyme E2D 2, mRNA (cDNA clone MGC:93393 IMAGE:7113229), complete cds Length = 1499 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| ||||| || || ||||||||||| Sbjct: 252 gcaggtcctgtcggggaagatatgttccattggcaagctacaatcatggggcc 304
>gb|BC050749.1| Mus musculus RIKEN cDNA 1700013N18 gene, mRNA (cDNA clone MGC:58124 IMAGE:6772621), complete cds Length = 1544 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| |||||||| || || ||||||||||| Sbjct: 299 gcaggtcctgtcggggaagatatgtttcactggcaagctacaatcatggggcc 351
>gb|AY221464.1| Ovis aries UbcH5B mRNA, partial cds Length = 291 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 121 attcatttcccaacagattaccccttcaa 149
>gb|U56407.1|RNU56407 Rattus norvegicus ubiquitin conjugating enzyme mRNA, complete cds Length = 1362 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || |||||||| ||||| || || ||||||||||| Sbjct: 143 gcaggtcctgtcggggaagatatgttccattggcaagctacaatcatggggcc 195
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 205 gcaggtcctgtaggtgaggacatgttccactggcaggccaccatcatggggcc 257 ||||||||||| || || || ||||| |||||||| || || ||||||||||| Sbjct: 139429 gcaggtcctgtcggggaagatatgtttcactggcaagctacaatcatggggcc 139481
>gb|L40146.1|HUMUBC Homo sapiens ubiquitin conjugating enzyme (UBC4) gene, complete cds Length = 444 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 160 attcatttcccaacagattaccccttcaa 188
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence Length = 200505 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 134453 attcatttcccaacagattaccccttcaa 134481
>gb|AC141471.4| Mus musculus BAC clone RP24-326K11 from 18, complete sequence Length = 216048 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 attcatttcccaccggattaccccttcaa 326 |||||||||||| | |||||||||||||| Sbjct: 215217 attcatttcccaacagattaccccttcaa 215189 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,296,729 Number of Sequences: 3902068 Number of extensions: 2296729 Number of successful extensions: 67398 Number of sequences better than 10.0: 308 Number of HSP's better than 10.0 without gapping: 312 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 66665 Number of HSP's gapped (non-prelim): 735 length of query: 354 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 332 effective length of database: 17,147,199,772 effective search space: 5692870324304 effective search space used: 5692870324304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)