ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRI2_ARATH (Q84WJ2) Probable DNA primase large subunit (EC 2.7.7.-) 118 4e-27
2PRI2_YEAST (P20457) DNA primase large subunit (EC 2.7.7.-) (DNA ... 59 3e-09
3PRI2_HUMAN (P49643) DNA primase large subunit (EC 2.7.7.-) (DNA ... 54 1e-07
4PRI2_RAT (O89044) DNA primase large subunit (EC 2.7.7.-) (DNA pr... 51 6e-07
5PRI2_MOUSE (P33610) DNA primase large subunit (EC 2.7.7.-) (DNA ... 51 8e-07
6PRI2_SCHPO (O74761) DNA primase large subunit (EC 2.7.7.-) 47 1e-05
7PRI2_DROME (Q9VPH2) DNA primase large subunit (EC 2.7.7.-) 47 1e-05
8PRI2_NEUCR (Q8NIZ4) Probable DNA primase large subunit (EC 2.7.7.-) 44 1e-04
9PRI2_CAEEL (O02334) DNA primase large subunit (EC 2.7.7.-) 34 0.096
10MSRA2_RHOBA (Q7UJI2) Peptide methionine sulfoxide reductase msrA... 33 0.13
11PAPPA_HUMAN (Q13219) Pappalysin-1 precursor (EC 3.4.24.79) (Preg... 30 1.4
12PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79) (Preg... 30 1.4
13CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain 29 2.4
14RMLA_STRMU (P95778) Glucose-1-phosphate thymidylyltransferase (E... 29 3.1
15TRAM_AGRT5 (Q44452) Transcriptional repressor traM 29 3.1
16PHXR1_MOUSE (P15973) Putative per-hexamer repeat protein 1 29 3.1
17GNAT_XENLA (P38407) Guanine nucleotide-binding protein G(t), alp... 29 3.1
18CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor 28 4.0
19PYRG_BUCAI (P57491) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga... 28 4.0
20CVCB_PEA (P13919) Convicilin precursor (Fragment) 28 5.3
21ECTA_CHRSL (Q9ZEU8) L-2,4-diaminobutyric acid acetyltransferase ... 28 5.3
22GNAT1_MOUSE (P20612) Guanine nucleotide-binding protein G(t), al... 28 5.3
23GNAT1_HUMAN (P11488) Guanine nucleotide-binding protein G(t), al... 28 5.3
24GNAT1_CANFA (Q28300) Guanine nucleotide-binding protein G(t), al... 28 5.3
25GNAT1_BOVIN (P04695) Guanine nucleotide-binding protein G(t), al... 28 5.3
26MSRA_PSEFL (O69761) Peptide methionine sulfoxide reductase msrA ... 28 5.3
27CVCA_PEA (P13915) Convicilin precursor 28 5.3
28CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor 28 6.9
29MSRA3_RHIME (Q92Y45) Peptide methionine sulfoxide reductase msrA... 27 9.0
30MSRA_MYCLE (Q9CCZ3) Peptide methionine sulfoxide reductase msrA ... 27 9.0
31GTFS_STRDO (P29336) Glucosyltransferase-S precursor (EC 2.4.1.5)... 27 9.0
32COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor 27 9.0
33TSNA1_HUMAN (Q96NA8) t-SNARE domain-containing protein 1 27 9.0
34RSH1_MAIZE (Q41853) Homeobox protein rough sheath 1 27 9.0
35COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor 27 9.0

>PRI2_ARATH (Q84WJ2) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 454

 Score =  118 bits (295), Expect = 4e-27
 Identities = 60/106 (56%), Positives = 72/106 (67%)
 Frame = +3

Query: 78  MEIVRSQRQLXXXXXXXXXXXXXXXXLPTYRVAPQLEVRLEEFELFAIDRLRVLKGISDG 257
           ME++RSQ++                 LP Y  AP +EVRLEEFELFAIDRLRVLKG+SDG
Sbjct: 1   MEVIRSQKR------TVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDG 54

Query: 258 LSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKGHISHFVLRLVYC 395
           L+R + P EM+ LV  LWK HMR  + +E +NK  ISHFVLRLVYC
Sbjct: 55  LARARNPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYC 100



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>PRI2_YEAST (P20457) DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa|
           subunit) (p58)
          Length = 528

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +3

Query: 156 LPTYRVAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGKRPEEMEKLVS-ELWKAHMRHQ 332
           L  Y + PQ E+ LE+FE++AIDRL++L  I   LSR K  +E+E ++  +  K    + 
Sbjct: 59  LSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPFNT 118

Query: 333 DPAETLNKGHISHFVLRLVYC 395
           +  E   K + SHF+LRL +C
Sbjct: 119 ESLEDRKKDYYSHFILRLCFC 139



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>PRI2_HUMAN (P49643) DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa|
           subunit) (p58)
          Length = 509

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
 Frame = +3

Query: 156 LPTYRVAPQLEVRLEEFELFAIDRLRVLKGISD-GLSRGKRPEEME-KLVSELWKAHMRH 329
           L  Y   P   + L EFE  AIDR+++LK + + G+S  K  E+ + KL SEL K    +
Sbjct: 26  LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85

Query: 330 ----QDPAETLNKGHISHFVLRLVYC 395
               +D  E   + HISHF+LRL YC
Sbjct: 86  RENLEDEYEPRRRDHISHFILRLAYC 111



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>PRI2_RAT (O89044) DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa|
           subunit) (p58)
          Length = 507

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = +3

Query: 156 LPTYRVAPQLEVRLEEFELFAIDRLRVLKGISD-GLSRGKRPEEME-KLVSELWKAHMRH 329
           L  Y   P   + L EFE  A DR+++LK I + G+S  K  E+ + KL +E+ K    +
Sbjct: 26  LQFYLQPPTENISLTEFESLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFSY 85

Query: 330 ----QDPAETLNKGHISHFVLRLVYC 395
               +D  E   + HISHF+LRL YC
Sbjct: 86  RENLEDEYEPRRRDHISHFILRLAYC 111



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>PRI2_MOUSE (P33610) DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa|
           subunit) (p58)
          Length = 505

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = +3

Query: 156 LPTYRVAPQLEVRLEEFELFAIDRLRVLKGISD-GLSRGKRPEEME-KLVSELWKAHMRH 329
           L  Y   P   + L EFE  A DR+++LK I + G+S  K  E+ + KL +E+ K    +
Sbjct: 26  LQFYLQPPTENISLTEFENLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFSY 85

Query: 330 ----QDPAETLNKGHISHFVLRLVYC 395
               +D  E   + HISHF+LRL YC
Sbjct: 86  RENLEDEYEPRRRDHISHFILRLAYC 111



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>PRI2_SCHPO (O74761) DNA primase large subunit (EC 2.7.7.-)|
          Length = 459

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
 Frame = +3

Query: 165 YRVAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGKRPEEMEKLVSELWKAHM------- 323
           Y+  P  E+ +EEFE +AIDRL VL  I   + R K   E+  ++ ++    +       
Sbjct: 33  YKKPPVSEISIEEFETWAIDRLVVLGEIESAMLRNKTKNELNGIIKKILDKRLPMSSNMA 92

Query: 324 ---RHQDPAETLNKGHISHFVLRLVY 392
              +     E   K H SHF+LRL +
Sbjct: 93  RTVKGNSLDEERRKDHYSHFILRLAF 118



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>PRI2_DROME (Q9VPH2) DNA primase large subunit (EC 2.7.7.-)|
          Length = 533

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
 Frame = +3

Query: 165 YRVAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGKR--PEEMEKLVS-----ELWKAHM 323
           Y   P  +V ++EFE  A++RLR+L+ +    +R  R   +E +++VS     E  ++++
Sbjct: 31  YHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSYL 90

Query: 324 R---------HQDPAETLNKGHISHFVLRLVYC 395
           R         H+   +T  + ++SHF+LRL YC
Sbjct: 91  RLCSTGGSAKHEADIQTRRRDYLSHFILRLAYC 123



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>PRI2_NEUCR (Q8NIZ4) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 513

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
 Frame = +3

Query: 165 YRVAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGKRPEE----MEKLVSELWKAHMRHQ 332
           Y   P  ++ +E+FE +AIDRLR+L  +     R K P E    M+ L+ +         
Sbjct: 41  YSTPPTADITIEQFEQWAIDRLRILAELEACSFRNKTPAETASHMKPLLDKYLPLDTNSS 100

Query: 333 DPAETL---NKGHISHFVLRLVY 392
             ++      K H SHF+LRL +
Sbjct: 101 SSSQLFAQRQKDHYSHFILRLAF 123



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>PRI2_CAEEL (O02334) DNA primase large subunit (EC 2.7.7.-)|
          Length = 503

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
 Frame = +3

Query: 156 LPTYRVAPQLEVRLEEFELFAIDRLRVLKGISD-----GLSRGKRPEEMEKLVSELWKAH 320
           L  Y+  P  ++ L EF+  A++RL++LK   +      L   +  ++  KL        
Sbjct: 41  LQLYQTPPGDDISLTEFDDIAMERLKLLKSFENLKDSVSLYNDEFKDKFRKLCDGTKLIV 100

Query: 321 MRHQDPA------ETLNKGHISHFVLRLVYC 395
              Q P       E   + +I HF+LRL +C
Sbjct: 101 FPDQKPPHQEEVYELWRRDNIGHFILRLAFC 131



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>MSRA2_RHOBA (Q7UJI2) Peptide methionine sulfoxide reductase msrA 2 (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase 2) (Peptide Met(O)
           reductase 2)
          Length = 168

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 25/72 (34%), Positives = 37/72 (51%)
 Frame = +3

Query: 159 PTYRVAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGKRPEEMEKLVSELWKAHMRHQDP 338
           P+YR A  +    EE +  A+D +  +   + GL  GK   E+E  VS+ W+A   HQD 
Sbjct: 88  PSYRSA--IYYVDEEQKQIALDTIADVN--ASGLWPGKVVTEVEP-VSDFWEAEPEHQDY 142

Query: 339 AETLNKGHISHF 374
            E +  G+  HF
Sbjct: 143 LEKVPNGYTCHF 154



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>PAPPA_HUMAN (Q13219) Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated|
            plasma protein-A) (PAPP-A) (Insulin-like growth
            factor-dependent IGF-binding protein 4 protease)
            (IGF-dependent IGFBP-4 protease) (IGFBP-4ase)
          Length = 1628

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 224  PPPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPGSSRDFKQGTYISLCT 379
            PPP P   L  A   E     G   K   +  Y  PGSSR  K+  + + CT
Sbjct: 1350 PPPVPNADLQTARCRENKHKVGSFCKYKCKPGYHVPGSSRKSKKRAFKTQCT 1401



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>PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated|
            plasma protein-A) (PAPP-A) (Insulin-like growth
            factor-dependent IGF-binding protein 4 protease)
            (IGF-dependent IGFBP-4 protease) (IGFBP-4ase)
          Length = 1624

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 224  PPPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPGSSRDFKQGTYISLCT 379
            PPP P   L  A   E     G   K   +  Y  PGSSR  K+  + + CT
Sbjct: 1346 PPPVPNADLQTARCRENKHKVGSFCKYKCKPGYHVPGSSRKSKKRAFKTQCT 1397



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>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +2

Query: 221 RPPPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPGSSRD 346
           R PP P+G  G A    E   DG  G   + G   APG+  D
Sbjct: 836 RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGAPGAKGD 877



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>RMLA_STRMU (P95778) Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)|
           (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase)
          Length = 289

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 212 LRHRPPPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPGSSR 343
           L +   PSP+G     I GEE  GD      + +  Y  PG SR
Sbjct: 75  LSYAEQPSPDGLAQAFIIGEEFIGDDHVALILGDNIYYGPGLSR 118



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>TRAM_AGRT5 (Q44452) Transcriptional repressor traM|
          Length = 102

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 255 GLSRGKRPEEMEKLVSELWKAHMRHQDPAETL 350
           GL+RG  P ++EKL  +  +AH R  + A+ L
Sbjct: 19  GLTRGLHPADLEKLTIDAIRAHRRLVEKADEL 50



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>PHXR1_MOUSE (P15973) Putative per-hexamer repeat protein 1|
          Length = 60

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 230 PSPEGYLGWAIAGEEARGDGETGKRVVEGT-YEAPGSSRD 346
           P  E YL W +AGE       TG R + G  + APGS R+
Sbjct: 8   PPYELYLHWPLAGEVQSQYWGTGDRGISGAHWPAPGSLRE 47



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>GNAT_XENLA (P38407) Guanine nucleotide-binding protein G(t), alpha subunit|
           (Transducin alpha chain)
          Length = 349

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 222 DRLRVLKGISDGLSRGKRPEEMEKLVSELWK 314
           D  R L  ++D +  G  P+EM  ++  LWK
Sbjct: 97  DDARKLMHLADTIDEGSMPKEMSDIIGRLWK 127



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>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor|
          Length = 1690

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = +2

Query: 215 RHRPP-----PSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPG 334
           RH PP     P P+G+ G   A   +  DG  G+    GT E PG
Sbjct: 675 RHGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPG 719



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>PYRG_BUCAI (P57491) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 545

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 394 QYTRRSTK*DICPLFKVSAGSWCLICAFHNSLTS 293
           Q T RS K ++  + ++S   W L C FH   TS
Sbjct: 488 QVTGRSQKNNVVEIIELSNHPWFLACQFHPEFTS 521



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>CVCB_PEA (P13919) Convicilin precursor (Fragment)|
          Length = 386

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 240 KGISDGLSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKGH 362
           K +  G  R +R EE E+ V E W+   R +DP E     H
Sbjct: 133 KEVQPGRERWER-EEDEEQVDEEWRGSQRREDPEERARLRH 172



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>ECTA_CHRSL (Q9ZEU8) L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)|
           (DABA acetyltransferase)
          Length = 192

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 233 SPEGYLGWAIA-GEEARGDGETGKRVVEGTYEAPG 334
           +P+ Y  W +A GE+ARG G   +R+VE     PG
Sbjct: 95  APDTYFLWQVAVGEKARGTG-LARRLVEAVLMRPG 128



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>GNAT1_MOUSE (P20612) Guanine nucleotide-binding protein G(t), alpha-1 subunit|
           (Transducin alpha-1 chain)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 222 DRLRVLKGISDGLSRGKRPEEMEKLVSELWK 314
           D  R L  ++D +  G  P+EM  ++  LWK
Sbjct: 97  DDARKLMHMADTIEEGTMPKEMSDIIQRLWK 127



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>GNAT1_HUMAN (P11488) Guanine nucleotide-binding protein G(t), alpha-1 subunit|
           (Transducin alpha-1 chain)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 222 DRLRVLKGISDGLSRGKRPEEMEKLVSELWK 314
           D  R L  ++D +  G  P+EM  ++  LWK
Sbjct: 97  DDARKLMHMADTIEEGTMPKEMSDIIQRLWK 127



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>GNAT1_CANFA (Q28300) Guanine nucleotide-binding protein G(t), alpha-1 subunit|
           (Transducin alpha-1 chain)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 222 DRLRVLKGISDGLSRGKRPEEMEKLVSELWK 314
           D  R L  ++D +  G  P+EM  ++  LWK
Sbjct: 97  DDARKLMHMADTIEEGTMPKEMSDIIQRLWK 127



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>GNAT1_BOVIN (P04695) Guanine nucleotide-binding protein G(t), alpha-1 subunit|
           (Transducin alpha-1 chain)
          Length = 349

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 222 DRLRVLKGISDGLSRGKRPEEMEKLVSELWK 314
           D  R L  ++D +  G  P+EM  ++  LWK
Sbjct: 97  DDARKLMHMADTIEEGTMPKEMSDIIQRLWK 127



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>MSRA_PSEFL (O69761) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase) (Peptide Met(O)
           reductase)
          Length = 209

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 309 WKAHMRHQDPAETLNKGHISHFVLRL 386
           W+A   HQD  E +  G+  HF+ R+
Sbjct: 136 WEAEPEHQDYLERIPNGYTCHFIRRM 161



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>CVCA_PEA (P13915) Convicilin precursor|
          Length = 571

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 240 KGISDGLSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKGH 362
           K +  G  R +R EE E+ V E W+   R +DP E     H
Sbjct: 85  KEVQPGRERWER-EEDEEQVEEEWRGSQRREDPEERARLRH 124



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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +2

Query: 221  RPPPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPGSSRD 346
            R PP P+G  G A    E   DG  G   + G   +PG   D
Sbjct: 992  RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGD 1033



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>MSRA3_RHIME (Q92Y45) Peptide methionine sulfoxide reductase msrA 3 (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase 3) (Peptide Met(O)
           reductase 3)
          Length = 168

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 249 SDGLSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKGHISHF 374
           + GL  GK   E+E  V + W+A   HQ+  E    G+  HF
Sbjct: 114 ASGLWPGKVVTEVEP-VRDFWEAEPEHQNYLERYPNGYTCHF 154



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>MSRA_MYCLE (Q9CCZ3) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase) (Peptide Met(O)
           reductase)
          Length = 177

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 198 EEFELFAIDRLRVLKGISDGLSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKGHISHFV 377
           +E +  A+D +  ++  S  L  GK   E+  L  + W+A   HQD  +    G+  HFV
Sbjct: 103 DEQKKVALDTIAAVEASS--LWPGKVVTEVS-LAEDFWEAEPEHQDYLQHYPNGYTCHFV 159



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>GTFS_STRDO (P29336) Glucosyltransferase-S precursor (EC 2.4.1.5) (GTF-S)|
            (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1365

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
 Frame = +2

Query: 230  PSPEGYLGWAIAGEEA---RGDGE--TGKRVVEG 316
            P+P+G  GW + G+     R DG+  TG++ ++G
Sbjct: 1209 PAPQGQAGWKLLGDNQWGYRKDGQLLTGEQTIDG 1242



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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 227  PPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPG 334
            PP P G  G   A   A GDGE G R  +G +   G
Sbjct: 1148 PPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1183



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>TSNA1_HUMAN (Q96NA8) t-SNARE domain-containing protein 1|
          Length = 513

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
 Frame = +2

Query: 212 LRHRPPPSPEGYLGWAIAGEEARGD-GETGKRVV-----EGTYEAPGSSR 343
           +RH P PSPE  L     G++  GD G  G  +V      G   AP  SR
Sbjct: 40  IRHFPCPSPESKLQNPCVGKDGEGDLGPAGTPIVPRARKRGPGVAPEGSR 89



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>RSH1_MAIZE (Q41853) Homeobox protein rough sheath 1|
          Length = 351

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
 Frame = +3

Query: 177 PQLEVRLEEFELFAIDRLRVLKGISDGLS-----------RGKRPEEMEKLVSELWKAHM 323
           P+++ R E+ EL    + ++LK  S  LS           +GK P+E  + +   W+ H 
Sbjct: 222 PEIDPRAEDKEL----KYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHY 277

Query: 324 RHQDPAET 347
           +   P+ET
Sbjct: 278 KWPYPSET 285



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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 227  PPSPEGYLGWAIAGEEARGDGETGKRVVEGTYEAPG 334
            PP P G  G   A   A GDGE G R  +G +   G
Sbjct: 1146 PPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,086,835
Number of Sequences: 219361
Number of extensions: 608959
Number of successful extensions: 2269
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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