ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477660.1| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
2dbj|AK101812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3ref|XM_477661.1| Oryza sativa (japonica cultivar-group), mRNA 186 4e-44
4dbj|AK064087.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
6dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
7dbj|AP005438.5| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
8gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 44 0.34
9gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 44 0.34
10gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, comple... 44 0.34
11ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
12gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 1.3
13ref|XM_422723.1| PREDICTED: Gallus gallus similar to Programmed ... 42 1.3
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
15gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 42 1.3
16ref|XM_838505.1| Leishmania major strain Friedlin hypothetical p... 42 1.3
17emb|CR628382.18| Zebrafish DNA sequence from clone DKEY-200C24 i... 42 1.3
18gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 42 1.3
19emb|CR390246.1| Gallus gallus finished cDNA, clone ChEST924k15 42 1.3
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
21dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
23dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.3
24gb|AY308813.1| Canis familiaris homeobox A10 gene, partial sequence 40 5.3
25ref|NM_197533.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.3
26ref|NM_183961.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
27gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
28ref|XM_423398.1| PREDICTED: Gallus gallus similar to cingulin (L... 40 5.3
29ref|NM_153757.1| Homo sapiens nucleosome assembly protein 1-like... 40 5.3
30ref|XM_848390.1| PREDICTED: Canis familiaris similar to Pituitar... 40 5.3
31ref|XM_849064.1| PREDICTED: Canis familiaris homeobox A10 (HOXA1... 40 5.3
32gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome... 40 5.3
33gb|AC154525.2| Mus musculus BAC clone RP24-68I9 from chromosome ... 40 5.3
34ref|XM_500908.1| Yarrowia lipolytica CLIB122, YALI0B14971g predi... 40 5.3
35emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.3
36emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 5.3
37emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 5.3
38emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 5.3
39gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 geno... 40 5.3
40gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno... 40 5.3
41emb|AL834329.1|HSM805382 Homo sapiens mRNA; cDNA DKFZp434K0835 (... 40 5.3
42gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcript... 40 5.3
43dbj|AK054689.1| Homo sapiens cDNA FLJ30127 fis, clone BRACE10001... 40 5.3
44ref|NM_135092.1| Drosophila melanogaster tombola CG14016-RA (tom... 40 5.3
45ref|NM_135091.2| Drosophila melanogaster CG31989-RA (CG31989), mRNA 40 5.3
46gb|AY075462.1| Drosophila melanogaster RE18364 full length cDNA 40 5.3
47gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.3
48dbj|AK047509.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 5.3
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
50dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
52gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, r... 40 5.3
53gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, r... 40 5.3
54gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, comple... 40 5.3
55dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
56gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.3
57dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.3
58emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on ch... 40 5.3
59dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, ... 40 5.3
60ref|NM_211424.1| Eremothecium gossypii AGL305Wp (AGL305W), mRNA 40 5.3
61dbj|AK070833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
62gb|BC104883.1| Homo sapiens nucleosome assembly protein 1-like 5... 40 5.3
63emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 i... 40 5.3
64gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19... 40 5.3
65emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, ... 40 5.3
66gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
67gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
68emb|AL935301.8| Mouse DNA sequence from clone RP23-132B12 on chr... 40 5.3
69gb|AC157663.2| Gallus gallus BAC clone CH261-38B6 from chromosom... 40 5.3
70emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 5.3
71dbj|AP001966.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 5.3 
>ref|XM_477660.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1942

 Score =  218 bits (110), Expect = 1e-53
 Identities = 211/242 (87%), Gaps = 2/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
           |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 170 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 229

                                                                       
Query: 216 gccatcgaccgcctccgagtcctgaagggtatctcggatgggctatcgcgggggaagagg 275
           ||||||||||||||||||||  ||||||| ||| | || ||||| ||||| |||||||| 
Sbjct: 230 gccatcgaccgcctccgagtattgaaggggatcgccgacgggctctcgcgagggaagaga 289

                                                                       
Query: 276 cccgaggagatggagaaactggtaagcgagttgtggaaggcacatatgaggcaccaggat 335
           || ||||| ||||||||| |||| |  || |||||||| || ||||||||||||||||||
Sbjct: 290 ccggaggaaatggagaaattggtcaaggaattgtggaaagcccatatgaggcaccaggat 349

                                                                       
Query: 336 ccagcagagactttaaacaagggacat-atatctcactttgtactccgtcttgtatactg 394
           ||  |||||||||| ||||| |||||| |||||||||||||| ||||||||||| |||||
Sbjct: 350 cctacagagactttgaacaa-ggacataatatctcactttgttctccgtcttgtctactg 408

             
Query: 395 ca 396
           ||
Sbjct: 409 ca 410



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 75  gccatggagatcgtgcgatcccaacggcagctcgcggc 112
           ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 89  gccatggagatcgtgagatcccaccggcagatcgcggc 126
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>dbj|AK101812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066O22, full
           insert sequence
          Length = 1942

 Score =  218 bits (110), Expect = 1e-53
 Identities = 211/242 (87%), Gaps = 2/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
           |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 170 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 229

                                                                       
Query: 216 gccatcgaccgcctccgagtcctgaagggtatctcggatgggctatcgcgggggaagagg 275
           ||||||||||||||||||||  ||||||| ||| | || ||||| ||||| |||||||| 
Sbjct: 230 gccatcgaccgcctccgagtattgaaggggatcgccgacgggctctcgcgagggaagaga 289

                                                                       
Query: 276 cccgaggagatggagaaactggtaagcgagttgtggaaggcacatatgaggcaccaggat 335
           || ||||| ||||||||| |||| |  || |||||||| || ||||||||||||||||||
Sbjct: 290 ccggaggaaatggagaaattggtcaaggaattgtggaaagcccatatgaggcaccaggat 349

                                                                       
Query: 336 ccagcagagactttaaacaagggacat-atatctcactttgtactccgtcttgtatactg 394
           ||  |||||||||| ||||| |||||| |||||||||||||| ||||||||||| |||||
Sbjct: 350 cctacagagactttgaacaa-ggacataatatctcactttgttctccgtcttgtctactg 408

             
Query: 395 ca 396
           ||
Sbjct: 409 ca 410



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 75  gccatggagatcgtgcgatcccaacggcagctcgcggc 112
           ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 89  gccatggagatcgtgagatcccaccggcagatcgcggc 126
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>ref|XM_477661.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1372

 Score =  186 bits (94), Expect = 4e-44
 Identities = 175/202 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
           |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 119 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 178

                                                                       
Query: 216 gccatcgaccgcctccgagtcctgaagggtatctcggatgggctatcgcgggggaagagg 275
           ||||||||||||||||||||  ||||||| ||| | || ||||| ||||| |||||||| 
Sbjct: 179 gccatcgaccgcctccgagtattgaaggggatcgccgacgggctctcgcgagggaagaga 238

                                                                       
Query: 276 cccgaggagatggagaaactggtaagcgagttgtggaaggcacatatgaggcaccaggat 335
           || ||||| ||||||||| |||| |  || |||||||| || ||||||||||||||||||
Sbjct: 239 ccggaggaaatggagaaattggtcaaggaattgtggaaagcccatatgaggcaccaggat 298

                                 
Query: 336 ccagcagagactttaaacaagg 357
           ||  |||||||||| |||||||
Sbjct: 299 cctacagagactttgaacaagg 320



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 75  gccatggagatcgtgcgatcccaacggcagctcgcggc 112
           ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 38  gccatggagatcgtgagatcccaccggcagatcgcggc 75
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>dbj|AK064087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-C02, full
           insert sequence
          Length = 1372

 Score =  186 bits (94), Expect = 4e-44
 Identities = 175/202 (86%)
 Strand = Plus / Plus

                                                                       
Query: 156 ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
           |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 119 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 178

                                                                       
Query: 216 gccatcgaccgcctccgagtcctgaagggtatctcggatgggctatcgcgggggaagagg 275
           ||||||||||||||||||||  ||||||| ||| | || ||||| ||||| |||||||| 
Sbjct: 179 gccatcgaccgcctccgagtattgaaggggatcgccgacgggctctcgcgagggaagaga 238

                                                                       
Query: 276 cccgaggagatggagaaactggtaagcgagttgtggaaggcacatatgaggcaccaggat 335
           || ||||| ||||||||| |||| |  || |||||||| || ||||||||||||||||||
Sbjct: 239 ccggaggaaatggagaaattggtcaaggaattgtggaaagcccatatgaggcaccaggat 298

                                 
Query: 336 ccagcagagactttaaacaagg 357
           ||  |||||||||| |||||||
Sbjct: 299 cctacagagactttgaacaagg 320



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 75  gccatggagatcgtgcgatcccaacggcagctcgcggc 112
           ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 38  gccatggagatcgtgagatcccaccggcagatcgcggc 75
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                            
Query: 156      ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
                |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 12525918 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 12525859

                                   
Query: 216      gccatcgaccgcctccgag 234
                |||||||||||||||||||
Sbjct: 12525858 gccatcgaccgcctccgag 12525840



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 83/92 (90%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                            
Query: 306      ttgtggaaggcacatatgaggcaccaggatccagcagagactttaaacaagggacat-at 364
                |||||||| || ||||||||||||||||||||  |||||||||| ||||| |||||| ||
Sbjct: 12525438 ttgtggaaagcccatatgaggcaccaggatcctacagagactttgaacaa-ggacataat 12525380

                                                
Query: 365      atctcactttgtactccgtcttgtatactgca 396
                |||||||||||| ||||||||||| |||||||
Sbjct: 12525379 atctcactttgttctccgtcttgtctactgca 12525348



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 75       gccatggagatcgtgcgatcccaacggcagctcgcggc 112
                ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 12525999 gccatggagatcgtgagatcccaccggcagatcgcggc 12525962



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 109     cggcagcagccgcagctgcca 129
               |||||||||||||||||||||
Sbjct: 2211905 cggcagcagccgcagctgcca 2211925
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>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0613B07
          Length = 191756

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 156    ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
              |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 170200 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 170141

                                 
Query: 216    gccatcgaccgcctccgag 234
              |||||||||||||||||||
Sbjct: 170140 gccatcgaccgcctccgag 170122



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 83/92 (90%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                          
Query: 306    ttgtggaaggcacatatgaggcaccaggatccagcagagactttaaacaagggacat-at 364
              |||||||| || ||||||||||||||||||||  |||||||||| ||||| |||||| ||
Sbjct: 169720 ttgtggaaagcccatatgaggcaccaggatcctacagagactttgaacaa-ggacataat 169662

                                              
Query: 365    atctcactttgtactccgtcttgtatactgca 396
              |||||||||||| ||||||||||| |||||||
Sbjct: 169661 atctcactttgttctccgtcttgtctactgca 169630



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 75     gccatggagatcgtgcgatcccaacggcagctcgcggc 112
              ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 170281 gccatggagatcgtgagatcccaccggcagatcgcggc 170244
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>dbj|AP005438.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1723_B06
          Length = 136853

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 156   ctgccaacgtaccgtgtggcgccgcagctggaggtgcgcctggaggagttcgagctcttc 215
             |||||||| ||||| |||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 10611 ctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttc 10552

                                
Query: 216   gccatcgaccgcctccgag 234
             |||||||||||||||||||
Sbjct: 10551 gccatcgaccgcctccgag 10533



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 83/92 (90%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                         
Query: 306   ttgtggaaggcacatatgaggcaccaggatccagcagagactttaaacaagggacat-at 364
             |||||||| || ||||||||||||||||||||  |||||||||| ||||| |||||| ||
Sbjct: 10131 ttgtggaaagcccatatgaggcaccaggatcctacagagactttgaacaa-ggacataat 10073

                                             
Query: 365   atctcactttgtactccgtcttgtatactgca 396
             |||||||||||| ||||||||||| |||||||
Sbjct: 10072 atctcactttgttctccgtcttgtctactgca 10041



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 75    gccatggagatcgtgcgatcccaacggcagctcgcggc 112
             ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 10692 gccatggagatcgtgagatcccaccggcagatcgcggc 10655
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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 130   gcggcggaggcagcggcgcgggggct 155
             ||||||| ||||||||||||||||||
Sbjct: 15983 gcggcggcggcagcggcgcgggggct 16008
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 130    gcggcggaggcagcggcgcggg 151
              ||||||||||||||||||||||
Sbjct: 124284 gcggcggaggcagcggcgcggg 124263
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>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence
          Length = 206373

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 130   gcggcggaggcagcggcgcgggggct 155
             ||||||| ||||||||||||||||||
Sbjct: 83341 gcggcggcggcagcggcgcgggggct 83316
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>ref|XM_476609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 cggcagcagccgcagctgcca 129
           |||||||||||||||||||||
Sbjct: 118 cggcagcagccgcagctgcca 138
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 108     gcggcagcagccgcagctgcc 128
               |||||||||||||||||||||
Sbjct: 1927690 gcggcagcagccgcagctgcc 1927710
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>ref|XM_422723.1| PREDICTED: Gallus gallus similar to Programmed cell death protein 1
            precursor (Protein PD-1) (hPD-1) (LOC424913), mRNA
          Length = 1457

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  gcaccaggatccagcagagac 346
            |||||||||||||||||||||
Sbjct: 1056 gcaccaggatccagcagagac 1036
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 130      gcggcggaggcagcggcgcgg 150
                |||||||||||||||||||||
Sbjct: 31472641 gcggcggaggcagcggcgcgg 31472621
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
              sequence
          Length = 133449

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    gcggcggaggcagcggcgcgg 150
              |||||||||||||||||||||
Sbjct: 119955 gcggcggaggcagcggcgcgg 119975
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>ref|XM_838505.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1424)
            partial mRNA
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  gcggcagcagccgcagctgcc 128
            |||||||||||||||||||||
Sbjct: 1588 gcggcagcagccgcagctgcc 1608
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>emb|CR628382.18| Zebrafish DNA sequence from clone DKEY-200C24 in linkage group 19,
             complete sequence
          Length = 156223

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   ctcactttgtactccgtcttg 387
             |||||||||||||||||||||
Sbjct: 17612 ctcactttgtactccgtcttg 17632
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>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
             sequence
          Length = 159091

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   gcggcggaggcagcggcgcgg 150
             |||||||||||||||||||||
Sbjct: 23159 gcggcggaggcagcggcgcgg 23179
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>emb|CR390246.1| Gallus gallus finished cDNA, clone ChEST924k15
          Length = 994

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 326 gcaccaggatccagcagagac 346
           |||||||||||||||||||||
Sbjct: 591 gcaccaggatccagcagagac 571
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 130      gcggcggaggcagcggcgcgg 150
                |||||||||||||||||||||
Sbjct: 31563157 gcggcggaggcagcggcgcgg 31563137
to top
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   cggcagcagccgcagctgcca 129
             |||||||||||||||||||||
Sbjct: 79807 cggcagcagccgcagctgcca 79827
to top
>dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F04, full
           insert sequence
          Length = 858

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 cggcagcagccgcagctgcca 129
           |||||||||||||||||||||
Sbjct: 118 cggcagcagccgcagctgcca 138
to top
>dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT04F23, TM0044a,
             complete sequence
          Length = 65620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 198   gaggagttcgagctcttcgccatcgaccgcctccgag 234
             ||||| ||||||  |||||||||||| ||||||||||
Sbjct: 47291 gaggatttcgagtccttcgccatcgatcgcctccgag 47327
to top
>gb|AY308813.1| Canis familiaris homeobox A10 gene, partial sequence
          Length = 454

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 gcggcggaggcagcggcgcggggg 153
           ||||||| ||||||||||||||||
Sbjct: 97  gcggcggtggcagcggcgcggggg 120
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>ref|NM_197533.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0060I05.7), mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 gcggcggaggcagcggcgcg 149
           ||||||||||||||||||||
Sbjct: 4   gcggcggaggcagcggcgcg 23
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>ref|NM_183961.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 126 cagcggcggaggcagcggcg 145
to top
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032D10 map E20933S, complete sequence
          Length = 146118

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ccagcggcggaggcagcggc 146
             ||||||||||||||||||||
Sbjct: 61129 ccagcggcggaggcagcggc 61148
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>ref|XM_423398.1| PREDICTED: Gallus gallus similar to cingulin (LOC425665), mRNA
          Length = 3681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 180  cagctggaggtgcgcctggaggag 203
            |||||||||| |||||||||||||
Sbjct: 3214 cagctggaggcgcgcctggaggag 3237
to top
>ref|NM_153757.1| Homo sapiens nucleosome assembly protein 1-like 5 (NAP1L5), mRNA
          Length = 1912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 125 cagcggcggaggcagcggcg 144
to top
>ref|XM_848390.1| PREDICTED: Canis familiaris similar to Pituitary tumor-transforming
           gene 1 protein-interacting protein precursor (Pituitary
           tumor-transforming gene protein binding factor)
           (PTTG-binding factor) (PBF) (LOC610832), mRNA
          Length = 420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 140 cagcggcgcgggggctctgccaacgtac 167
           |||| ||||||||||||||||| |||||
Sbjct: 30  cagccgcgcgggggctctgccatcgtac 3
to top
>ref|XM_849064.1| PREDICTED: Canis familiaris homeobox A10 (HOXA10), mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  gcggcggaggcagcggcgcggggg 153
            ||||||| ||||||||||||||||
Sbjct: 1004 gcggcggtggcagcggcgcggggg 1027
to top
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence
          Length = 187221

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 319    atatgaggcaccaggatccagcag 342
              ||||||||||| ||||||||||||
Sbjct: 180042 atatgaggcactaggatccagcag 180019
to top
>gb|AC154525.2| Mus musculus BAC clone RP24-68I9 from chromosome 14, complete sequence
          Length = 175953

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ccaggatccagcagagactt 348
              ||||||||||||||||||||
Sbjct: 104682 ccaggatccagcagagactt 104663
to top
>ref|XM_500908.1| Yarrowia lipolytica CLIB122, YALI0B14971g predicted mRNA
          Length = 3990

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 376 cagcggcggaggcagcggcg 357
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    tgcgcctggaggagttcgag 209
              ||||||||||||||||||||
Sbjct: 315524 tgcgcctggaggagttcgag 315543
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tgcgcctggaggagttcgag 209
             ||||||||||||||||||||
Sbjct: 74907 tgcgcctggaggagttcgag 74926
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    tgcgcctggaggagttcgag 209
              ||||||||||||||||||||
Sbjct: 153735 tgcgcctggaggagttcgag 153754
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gcagctcgcggcagcagccg 120
             ||||||||||||||||||||
Sbjct: 14705 gcagctcgcggcagcagccg 14724
to top
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete
             sequence
          Length = 105841

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   gcggcggaggcagcggcgcg 149
             ||||||||||||||||||||
Sbjct: 19696 gcggcggaggcagcggcgcg 19715
to top
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
              sequence
          Length = 194361

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    gcggcggaggcagcggcgcg 149
              ||||||||||||||||||||
Sbjct: 181929 gcggcggaggcagcggcgcg 181948
to top
>emb|AL834329.1|HSM805382 Homo sapiens mRNA; cDNA DKFZp434K0835 (from clone DKFZp434K0835)
          Length = 1907

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 110 cagcggcggaggcagcggcg 129
to top
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1
            gene, complete cds
          Length = 4098

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 111  gcagcagccgcagctgccagcggcggag 138
            |||||||||||||| |||| ||||||||
Sbjct: 2402 gcagcagccgcagccgccaccggcggag 2375
to top
>dbj|AK054689.1| Homo sapiens cDNA FLJ30127 fis, clone BRACE1000115, weakly similar
           to NUCLEOSOME ASSEMBLY PROTEIN 1-LIKE 2
          Length = 1912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 125 cagcggcggaggcagcggcg 144
to top
>ref|NM_135092.1| Drosophila melanogaster tombola CG14016-RA (tomb), mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 ggcagcagccgcagctgcca 129
           ||||||||||||||||||||
Sbjct: 270 ggcagcagccgcagctgcca 289
to top
>ref|NM_135091.2| Drosophila melanogaster CG31989-RA (CG31989), mRNA
          Length = 5201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  ggcagcagccgcagctgcca 129
            ||||||||||||||||||||
Sbjct: 4486 ggcagcagccgcagctgcca 4467
to top
>gb|AY075462.1| Drosophila melanogaster RE18364 full length cDNA
          Length = 5214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  ggcagcagccgcagctgcca 129
            ||||||||||||||||||||
Sbjct: 4484 ggcagcagccgcagctgcca 4465
to top
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    ggaggcagcggcgcgggggc 154
              ||||||||||||||||||||
Sbjct: 128735 ggaggcagcggcgcgggggc 128754
to top
>dbj|AK047509.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930082A22
            product:unclassifiable, full insert sequence
          Length = 4558

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 319  atatgaggcaccaggatccagcag 342
            ||||||||||| ||||||||||||
Sbjct: 3363 atatgaggcactaggatccagcag 3386
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 127      ccagcggcggaggcagcggc 146
                ||||||||||||||||||||
Sbjct: 10437283 ccagcggcggaggcagcggc 10437302
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      gcggcggaggcagcggcgcg 149
                ||||||||||||||||||||
Sbjct: 20304194 gcggcggaggcagcggcgcg 20304213
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 128      cagcggcggaggcagcggcg 147
                ||||||||||||||||||||
Sbjct: 13572548 cagcggcggaggcagcggcg 13572529
to top
>gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, region 25D-25D, BAC clone
              BACR44J04, complete sequence
          Length = 164884

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ggcagcagccgcagctgcca 129
              ||||||||||||||||||||
Sbjct: 147207 ggcagcagccgcagctgcca 147188
to top
>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone
             BACR35L07, complete sequence
          Length = 193924

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ggcagcagccgcagctgcca 129
             ||||||||||||||||||||
Sbjct: 57810 ggcagcagccgcagctgcca 57791
to top
>gb|AC013472.8| Homo sapiens BAC clone RP11-503P10 from 2, complete sequence
          Length = 149481

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    gaggagatggagaaactggt 298
              ||||||||||||||||||||
Sbjct: 122700 gaggagatggagaaactggt 122719
to top
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045F02
          Length = 215378

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cagcggcggaggcagcggcg 147
              ||||||||||||||||||||
Sbjct: 126508 cagcggcggaggcagcggcg 126489
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 45      ttccgccgcgcttggaaccaaaca 68
               ||||||||||||||||| ||||||
Sbjct: 2273855 ttccgccgcgcttggaagcaaaca 2273878
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 182     gctggaggtgcgcctggagg 201
               ||||||||||||||||||||
Sbjct: 3172859 gctggaggtgcgcctggagg 3172840
to top
>emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on chromosome 2, complete
             sequence
          Length = 146396

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   gagatggagaaactggtaag 301
             ||||||||||||||||||||
Sbjct: 18487 gagatggagaaactggtaag 18468
to top
>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete
              sequences
          Length = 183155

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    gaggcccgaggagatggaga 291
              ||||||||||||||||||||
Sbjct: 118205 gaggcccgaggagatggaga 118224
to top
>ref|NM_211424.1| Eremothecium gossypii AGL305Wp (AGL305W), mRNA
          Length = 3174

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 135 ggaggcagcggcgcgggggc 154
           ||||||||||||||||||||
Sbjct: 37  ggaggcagcggcgcgggggc 56
to top
>dbj|AK070833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070K11, full
            insert sequence
          Length = 1200

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  ccagcggcggaggcagcggc 146
            ||||||||||||||||||||
Sbjct: 1042 ccagcggcggaggcagcggc 1023
to top
>gb|BC104883.1| Homo sapiens nucleosome assembly protein 1-like 5, mRNA (cDNA clone
           MGC:132543 IMAGE:8143886), complete cds
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cagcggcggaggcagcggcg 147
           ||||||||||||||||||||
Sbjct: 74  cagcggcggaggcagcggcg 93
to top
>emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 in linkage group 20,
             complete sequence
          Length = 130645

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 343   agactttaaacaagggacatatat 366
             |||||||||||| |||||||||||
Sbjct: 33261 agactttaaacatgggacatatat 33284
to top
>gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19 of 83 of the complete
              sequence
          Length = 260249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ggcagcagccgcagctgcca 129
              ||||||||||||||||||||
Sbjct: 100917 ggcagcagccgcagctgcca 100898
to top
>emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, complete sequence
          Length = 167232

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     aaccaaacacccacagccat 79
              ||||||||||||||||||||
Sbjct: 163265 aaccaaacacccacagccat 163284
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      gcggcggaggcagcggcgcg 149
                ||||||||||||||||||||
Sbjct: 20315466 gcggcggaggcagcggcgcg 20315485
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 127      ccagcggcggaggcagcggc 146
                ||||||||||||||||||||
Sbjct: 10508827 ccagcggcggaggcagcggc 10508846
to top
>emb|AL935301.8| Mouse DNA sequence from clone RP23-132B12 on chromosome 2, complete
              sequence
          Length = 182314

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 319    atatgaggcaccaggatccagcag 342
              ||||||||||| ||||||||||||
Sbjct: 125778 atatgaggcactaggatccagcag 125801
to top
>gb|AC157663.2| Gallus gallus BAC clone CH261-38B6 from chromosome unknown, complete
             sequence
          Length = 176280

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   gcggaggcagcggcgcgggg 152
             ||||||||||||||||||||
Sbjct: 45845 gcggaggcagcggcgcgggg 45826
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     cagcggcggaggcagcggcg 147
               ||||||||||||||||||||
Sbjct: 1989683 cagcggcggaggcagcggcg 1989664
to top
>dbj|AP001966.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2002A22, complete
             sequence
          Length = 128151

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   cagcggcggaggcagcggcg 147
             ||||||||||||||||||||
Sbjct: 41636 cagcggcggaggcagcggcg 41655


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,030,771
Number of Sequences: 3902068
Number of extensions: 3030771
Number of successful extensions: 63674
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63118
Number of HSP's gapped (non-prelim): 551
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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