ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62g10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2148 Score = 363 bits (183), Expect = 3e-97 Identities = 386/454 (85%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 1037 tgaagatgacgttgaaccagttgcttgtcgagctggatggctttaagcagaatgagggga 1096 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| ||||| ||||| ||||| || |||| || |||||||| || || || |||| Sbjct: 1097 taattgttattgctgcaaccaactttcctgagtccctagataaagcactagtgagacctg 1156 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 |||| |||||||| ||||| || ||||| |||||||||||||| ||||| || || |||| Sbjct: 1157 ggcgctttgaccggcatattgttgttccaaatccagatgttgaaggccggcggcaaatcc 1216 Query: 181 tggagactcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgcca 240 | ||| | |||||||||||||| ||||| || ||||||||| |||||| |||||||| Sbjct: 1217 tagagtcccatatgtcaaaggtcttgaagagtgatgatgtggatttgatgatcattgcca 1276 Query: 241 ggggaacacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctca 300 ||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||| | Sbjct: 1277 ggggaacacctggattctcaggtgcagaccttgctaacttggttaatgtggctgctctta 1336 Query: 301 aggctgccatggatggggcaaaatctgtttctatgaccgacctcgagtttgccaaggaca 360 | ||||||||||||||||||||| | ||| | |||| || || |||| |||||||||| Sbjct: 1337 aagctgccatggatggggcaaaagccgttacaatgaatgatcttgagtatgccaaggacc 1396 Query: 361 ggatcatgatgggcagcgaacgcanatcagcagtgatatccgacgaaagcaggaaaatga 420 |||||||||||||||| || |||| |||||||| || || || ||| | ||||| ||| Sbjct: 1397 ggatcatgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattga 1456 Query: 421 ctgcataccacgagggagggcatgccctcgttgc 454 | || ||||| ||||||||||| ||||| ||||| Sbjct: 1457 cggcgtaccatgagggagggcacgcccttgttgc 1490
>dbj|AK120948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C10, full insert sequence Length = 2894 Score = 363 bits (183), Expect = 3e-97 Identities = 386/454 (85%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 1282 tgaagatgacgttgaaccagttgcttgtcgagctggatggctttaagcagaatgagggga 1341 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| ||||| ||||| ||||| || |||| || |||||||| || || || |||| Sbjct: 1342 taattgttattgctgcaaccaactttcctgagtccctagataaagcactagtgagacctg 1401 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 |||| |||||||| ||||| || ||||| |||||||||||||| ||||| || || |||| Sbjct: 1402 ggcgctttgaccggcatattgttgttccaaatccagatgttgaaggccggcggcaaatcc 1461 Query: 181 tggagactcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgcca 240 | ||| | |||||||||||||| ||||| || ||||||||| |||||| |||||||| Sbjct: 1462 tagagtcccatatgtcaaaggtcttgaagagtgatgatgtggatttgatgatcattgcca 1521 Query: 241 ggggaacacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctca 300 ||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||| | Sbjct: 1522 ggggaacacctggattctcaggtgcagaccttgctaacttggttaatgtggctgctctta 1581 Query: 301 aggctgccatggatggggcaaaatctgtttctatgaccgacctcgagtttgccaaggaca 360 | ||||||||||||||||||||| | ||| | |||| || || |||| |||||||||| Sbjct: 1582 aagctgccatggatggggcaaaagccgttacaatgaatgatcttgagtatgccaaggacc 1641 Query: 361 ggatcatgatgggcagcgaacgcanatcagcagtgatatccgacgaaagcaggaaaatga 420 |||||||||||||||| || |||| |||||||| || || || ||| | ||||| ||| Sbjct: 1642 ggatcatgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattga 1701 Query: 421 ctgcataccacgagggagggcatgccctcgttgc 454 | || ||||| ||||||||||| ||||| ||||| Sbjct: 1702 cggcgtaccatgagggagggcacgcccttgttgc 1735
>ref|NM_193606.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2130 Score = 339 bits (171), Expect = 5e-90 Identities = 380/450 (84%) Strand = Plus / Plus Query: 5 gatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatgggataat 64 |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 1020 gatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataat 1079 Query: 65 tgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctgggcg 124 ||| ||||| || || ||||| || ||||| || |||||||| || || || |||||||| Sbjct: 1080 tgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcg 1139 Query: 125 gtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcctgga 184 |||||||| ||||| || ||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 1140 ctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctaga 1199 Query: 185 gactcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgccagggg 244 | | ||||||| ||||| ||||| || ||||||||| |||||| |||||||||||| Sbjct: 1200 gtcccatatgttgaaggtcttgaagagtgatgatgtggatttgatgatcattgccagggg 1259 Query: 245 aacacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctcaaggc 304 ||||||||| |||||||||||||||||||| ||| |||| |||||||||||||| ||||| Sbjct: 1260 aacacctggattctcaggtgcagaccttgctaacttggtaaatgtggctgctcttaaggc 1319 Query: 305 tgccatggatggggcaaaatctgtttctatgaccgacctcgagtttgccaaggacaggat 364 ||||||||||||||||||| | ||| | |||| ||||| |||| |||||||||| |||| Sbjct: 1320 tgccatggatggggcaaaagccgttacaatgaatgaccttgagtatgccaaggaccggat 1379 Query: 365 catgatgggcagcgaacgcanatcagcagtgatatccgacgaaagcaggaaaatgactgc 424 |||||||||||| || |||| |||||||| || || || ||| | ||||| |||| || Sbjct: 1380 catgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattgacggc 1439 Query: 425 ataccacgagggagggcatgccctcgttgc 454 ||||| ||||||||||| ||||| ||||| Sbjct: 1440 gtaccatgagggagggcacgcccttgttgc 1469
>dbj|AK072509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128D21, full insert sequence Length = 2606 Score = 339 bits (171), Expect = 5e-90 Identities = 380/450 (84%) Strand = Plus / Plus Query: 5 gatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatgggataat 64 |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 1160 gatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataat 1219 Query: 65 tgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctgggcg 124 ||| ||||| || || ||||| || ||||| || |||||||| || || || |||||||| Sbjct: 1220 tgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcg 1279 Query: 125 gtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcctgga 184 |||||||| ||||| || ||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 1280 ctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctaga 1339 Query: 185 gactcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgccagggg 244 | | ||||||| ||||| ||||| || ||||||||| |||||| |||||||||||| Sbjct: 1340 gtcccatatgttgaaggtcttgaagagtgatgatgtggatttgatgatcattgccagggg 1399 Query: 245 aacacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctcaaggc 304 ||||||||| |||||||||||||||||||| ||| |||| |||||||||||||| ||||| Sbjct: 1400 aacacctggattctcaggtgcagaccttgctaacttggtaaatgtggctgctcttaaggc 1459 Query: 305 tgccatggatggggcaaaatctgtttctatgaccgacctcgagtttgccaaggacaggat 364 ||||||||||||||||||| | ||| | |||| ||||| |||| |||||||||| |||| Sbjct: 1460 tgccatggatggggcaaaagccgttacaatgaatgaccttgagtatgccaaggaccggat 1519 Query: 365 catgatgggcagcgaacgcanatcagcagtgatatccgacgaaagcaggaaaatgactgc 424 |||||||||||| || |||| |||||||| || || || ||| | ||||| |||| || Sbjct: 1520 catgatgggcagtgagcgcaagtcagcagttatttctgatgaatcccggaaattgacggc 1579 Query: 425 ataccacgagggagggcatgccctcgttgc 454 ||||| ||||||||||| ||||| ||||| Sbjct: 1580 gtaccatgagggagggcacgcccttgttgc 1609
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 214 bits (108), Expect = 2e-52 Identities = 206/239 (86%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22074670 gatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgct 22074729 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| |||| |||||||||||||| |||||||||||||||||||||||| | ||| | ||| Sbjct: 22074730 aacttggtaaatgtggctgctcttaaggctgccatggatggggcaaaagccgttacaatg 22074789 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | ||||| |||| |||||||||| |||||||||||||||| || |||| |||||||| Sbjct: 22074790 aatgaccttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagtt 22074849 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || || ||| | ||||| |||| || ||||| ||||||||||| ||||| ||||| Sbjct: 22074850 atttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgc 22074908 Score = 198 bits (100), Expect = 1e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22082952 gatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgct 22083011 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| |||| |||||||||||||| || ||||||||||||||||||||| | ||| | ||| Sbjct: 22083012 aacttggttaatgtggctgctcttaaagctgccatggatggggcaaaagccgttacaatg 22083071 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | || || |||| |||||||||| |||||||||||||||| || |||| |||||||| Sbjct: 22083072 aatgatcttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagtt 22083131 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || || ||| | ||||| |||| || ||||| ||||||||||| ||||| ||||| Sbjct: 22083132 atttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgc 22083190 Score = 186 bits (94), Expect = 4e-44 Identities = 175/202 (86%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 22082652 tgaagatgacgttgaaccagttgcttgtcgagctggatggctttaagcagaatgagggga 22082711 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| ||||| ||||| ||||| || |||| || |||||||| || || || |||| Sbjct: 22082712 taattgttattgctgcaaccaactttcctgagtccctagataaagcactagtgagacctg 22082771 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 |||| |||||||| ||||| || ||||| |||||||||||||| ||||| || || |||| Sbjct: 22082772 ggcgctttgaccggcatattgttgttccaaatccagatgttgaaggccggcggcaaatcc 22082831 Query: 181 tggagactcatatgtcaaaggt 202 | ||| | |||||||||||||| Sbjct: 22082832 tagagtcccatatgtcaaaggt 22082853 Score = 149 bits (75), Expect = 9e-33 Identities = 162/191 (84%) Strand = Plus / Plus Query: 5 gatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatgggataat 64 |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 22074374 gatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataat 22074433 Query: 65 tgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctgggcg 124 ||| ||||| || || ||||| || ||||| || |||||||| || || || |||||||| Sbjct: 22074434 tgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcg 22074493 Query: 125 gtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcctgga 184 |||||||| ||||| || ||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 22074494 ctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctaga 22074553 Query: 185 gactcatatgt 195 | | ||||||| Sbjct: 22074554 gtcccatatgt 22074564
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 214 bits (108), Expect = 2e-52 Identities = 206/239 (86%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86183 gatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgct 86242 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| |||| |||||||||||||| |||||||||||||||||||||||| | ||| | ||| Sbjct: 86243 aacttggtaaatgtggctgctcttaaggctgccatggatggggcaaaagccgttacaatg 86302 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | ||||| |||| |||||||||| |||||||||||||||| || |||| |||||||| Sbjct: 86303 aatgaccttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagtt 86362 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || || ||| | ||||| |||| || ||||| ||||||||||| ||||| ||||| Sbjct: 86363 atttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgc 86421 Score = 198 bits (100), Expect = 1e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 94465 gatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgct 94524 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| |||| |||||||||||||| || ||||||||||||||||||||| | ||| | ||| Sbjct: 94525 aacttggttaatgtggctgctcttaaagctgccatggatggggcaaaagccgttacaatg 94584 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | || || |||| |||||||||| |||||||||||||||| || |||| |||||||| Sbjct: 94585 aatgatcttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagtt 94644 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || || ||| | ||||| |||| || ||||| ||||||||||| ||||| ||||| Sbjct: 94645 atttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgc 94703 Score = 186 bits (94), Expect = 4e-44 Identities = 175/202 (86%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 94165 tgaagatgacgttgaaccagttgcttgtcgagctggatggctttaagcagaatgagggga 94224 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| ||||| ||||| ||||| || |||| || |||||||| || || || |||| Sbjct: 94225 taattgttattgctgcaaccaactttcctgagtccctagataaagcactagtgagacctg 94284 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 |||| |||||||| ||||| || ||||| |||||||||||||| ||||| || || |||| Sbjct: 94285 ggcgctttgaccggcatattgttgttccaaatccagatgttgaaggccggcggcaaatcc 94344 Query: 181 tggagactcatatgtcaaaggt 202 | ||| | |||||||||||||| Sbjct: 94345 tagagtcccatatgtcaaaggt 94366 Score = 149 bits (75), Expect = 9e-33 Identities = 162/191 (84%) Strand = Plus / Plus Query: 5 gatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatgggataat 64 |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 85887 gatgaccttgaaccagttgcttgtcgaactggatggctttaagcagaatgagggaataat 85946 Query: 65 tgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctgggcg 124 ||| ||||| || || ||||| || ||||| || |||||||| || || || |||||||| Sbjct: 85947 tgtcattgctgcgaccaactttcctcagtccctagataaagcactagtgagacctgggcg 86006 Query: 125 gtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcctgga 184 |||||||| ||||| || ||||| ||||| |||||||| ||||| || || ||||| || Sbjct: 86007 ctttgaccggcatattgttgttccgaatcctgatgttgaaggccggcggcaaatcctaga 86066 Query: 185 gactcatatgt 195 | | ||||||| Sbjct: 86067 gtcccatatgt 86077
>dbj|AK062071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E05, full insert sequence Length = 1314 Score = 198 bits (100), Expect = 1e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14 gatgtggatttgatgatcattgccaggggaacacctggattctcaggtgcagaccttgct 73 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| |||| |||||||||||||| || ||||||||||||||||||||| | ||| | ||| Sbjct: 74 aacttggttaatgtggctgctcttaaagctgccatggatggggcaaaagccgttacaatg 133 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | || || |||| |||||||||| |||||||||||||||| || |||| |||||||| Sbjct: 134 aatgatcttgagtatgccaaggaccggatcatgatgggcagtgagcgcaagtcagcagtt 193 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || || ||| | ||||| |||| || ||||| ||||||||||| ||||| ||||| Sbjct: 194 atttctgatgaatcccggaaattgacggcgtaccatgagggagggcacgcccttgttgc 252
>gb|DQ308538.1| Triticum monococcum cultivar DV92 putative FtsH protease gene, partial cds Length = 2137 Score = 188 bits (95), Expect = 1e-44 Identities = 158/179 (88%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1120 tgaagatgaccttgaatcagttgcttgttgagctggatggctttaagcagaatgagggga 1179 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| || || ||||| |||||||| ||||| | |||||||| || || || |||| Sbjct: 1180 taattgtcatcgctgcaactaacttcccagagtcattagataaagcactagtcagacctg 1239 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatc 179 |||| ||||| |||||||| || ||||| |||||||||||||||||| |||| |||||| Sbjct: 1240 ggcgctttgatcgtcatattgttgttcccaatccagatgttgagggcagacgtcagatc 1298 Score = 167 bits (84), Expect = 4e-38 Identities = 200/239 (83%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||||||| |||||| |||||||||||||||||| || || |||||||| || ||||| Sbjct: 1412 gatgtggatttgatgatcattgccaggggaacaccaggattttcaggtgctgatcttgct 1471 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaatctgtttctatg 335 ||| ||||||||||||||||||| | |||||||||||||| |||||||| ||| ||| Sbjct: 1472 aacttggtgaatgtggctgctcttagagctgccatggatggcgcaaaatccgttagcatg 1531 Query: 336 accgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgcanatcagcagtg 395 | || || |||| |||||||||| ||||||||||||| || || |||| |||||||| Sbjct: 1532 aatgatctggagtatgccaaggaccggatcatgatgggtagtgagcgcaagtcagcagtt 1591 Query: 396 atatccgacgaaagcaggaaaatgactgcataccacgagggagggcatgccctcgttgc 454 || || ||||| ||||||| |||| |||||||| || |||||||||||||| ||||| Sbjct: 1592 atctctgacgagtgcaggaagctgacagcataccatgaaggagggcatgcccttgttgc 1650 Score = 131 bits (66), Expect = 2e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 820 tgaagatgaccttgaatcagttgcttgttgagctggatggctttaagcagaatgagggga 879 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagc 106 ||||||| || || ||||| |||||||| ||||| | |||||||| Sbjct: 880 taattgtcatcgctgcaactaacttcccagagtcattagataaagc 925
>ref|NM_128172.2| Arabidopsis thaliana FTSH4; ATP-dependent peptidase/ ATPase/ metallopeptidase AT2G26140 (FTSH4) mRNA, complete cds Length = 2713 Score = 123 bits (62), Expect = 5e-25 Identities = 167/202 (82%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||| |||| |||||| ||||||| ||||| |||||||| || | Sbjct: 1226 tgaagatgacattgaaccagatgctcgttgagttggatgggtttaaacagaatgaaggaa 1285 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 | ||||| | ||||||||||| ||||| |||| ||||||| ||||| || || |||| Sbjct: 1286 ttattgtggtcgcagcaacaaatttcccagagtctttggataaggccctggttagacctg 1345 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 || ||||||| |||||||| || || ||||| ||||| || || || ||||||||||| Sbjct: 1346 ggaggtttgatcgtcatattgttgtacctaacccagacgtggaaggtcgacgccagattt 1405 Query: 181 tggagactcatatgtcaaaggt 202 ||||| |||| ||||||||||| Sbjct: 1406 tggagtctcacatgtcaaaggt 1427 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 345 gagtttgccaaggacaggatcatgatggg 373 ||||||||||| ||||| ||||||||||| Sbjct: 1570 gagtttgccaaagacagaatcatgatggg 1598
>gb|AF360344.1| Arabidopsis thaliana At2g26140 mRNA sequence Length = 2678 Score = 123 bits (62), Expect = 5e-25 Identities = 167/202 (82%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||| |||| |||||| ||||||| ||||| |||||||| || | Sbjct: 1173 tgaagatgacattgaaccagatgctcgttgagttggatgggtttaaacagaatgaaggaa 1232 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 | ||||| | ||||||||||| ||||| |||| ||||||| ||||| || || |||| Sbjct: 1233 ttattgtggtcgcagcaacaaatttcccagagtctttggataaggccctggttagacctg 1292 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 || ||||||| |||||||| || || ||||| ||||| || || || ||||||||||| Sbjct: 1293 ggaggtttgatcgtcatattgttgtacctaacccagacgtggaaggtcgacgccagattt 1352 Query: 181 tggagactcatatgtcaaaggt 202 ||||| |||| ||||||||||| Sbjct: 1353 tggagtctcacatgtcaaaggt 1374 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 345 gagtttgccaaggacaggatcatgatggg 373 ||||||||||| ||||| ||||||||||| Sbjct: 1517 gagtttgccaaagacagaatcatgatggg 1545
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 123 bits (62), Expect = 5e-25 Identities = 167/202 (82%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||| |||| |||||| ||||||| ||||| |||||||| || | Sbjct: 11320 tgaagatgacattgaaccagatgctcgttgagttggatgggtttaaacagaatgaaggaa 11379 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 | ||||| | ||||||||||| ||||| |||| ||||||| ||||| || || |||| Sbjct: 11380 ttattgtggtcgcagcaacaaatttcccagagtctttggataaggccctggttagacctg 11439 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 || ||||||| |||||||| || || ||||| ||||| || || || ||||||||||| Sbjct: 11440 ggaggtttgatcgtcatattgttgtacctaacccagacgtggaaggtcgacgccagattt 11499 Query: 181 tggagactcatatgtcaaaggt 202 ||||| |||| ||||||||||| Sbjct: 11500 tggagtctcacatgtcaaaggt 11521 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 345 gagtttgccaaggacaggatcatgatggg 373 ||||||||||| ||||| ||||||||||| Sbjct: 11774 gagtttgccaaagacagaatcatgatggg 11802
>emb|BX820113.1|CNS0AA0Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2692 Score = 123 bits (62), Expect = 5e-25 Identities = 167/202 (82%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| ||||||||| |||| |||||| ||||||| ||||| |||||||| || | Sbjct: 1223 tgaagatgacattgaaccagatgctcgttgagttggatgggtttaaacagaatgaaggaa 1282 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 | ||||| | ||||||||||| ||||| |||| ||||||| ||||| || || |||| Sbjct: 1283 ttattgtggtcgcagcaacaaatttcccagagtctttggataaggccctggttagacctg 1342 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 || ||||||| |||||||| || || ||||| ||||| || || || ||||||||||| Sbjct: 1343 ggaggtttgatcgtcatattgttgtacctaacccagacgtggaaggtcgacgccagattt 1402 Query: 181 tggagactcatatgtcaaaggt 202 ||||| |||| ||||||||||| Sbjct: 1403 tggagtctcacatgtcaaaggt 1424 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 345 gagtttgccaaggacaggatcatgatggg 373 ||||||||||| ||||| ||||||||||| Sbjct: 1567 gagtttgccaaagacagaatcatgatggg 1595
>emb|AJ635223.1| Pisum sativum mRNA for ftsH-like protease (ftsh4 gene) Length = 2683 Score = 111 bits (56), Expect = 2e-21 Identities = 251/316 (79%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| || || || ||||||||||| | ||||| || || || || || || | Sbjct: 1320 tgaagatgactttaaatcaaatgcttgttgagttagatggattcaaacaaaacgaaggca 1379 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 |||||||||||| || || || || || ||||||| ||||| || || || || |||| Sbjct: 1380 taattgtaattggtgctactaattttcctgagtcactcgataaggctctggtgagacctg 1439 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccagatcc 180 |||| ||||| || ||| |||| ||||| ||||||||||| || || || || ||||| Sbjct: 1440 ggcgttttgatcgccatgtcgttgttcccaatccagatgtagaaggacggcgacagatta 1499 Query: 181 tggagactcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgcca 240 |||| |||| ||||||||||| ||||||| || ||||| |||| ||||| |||||| Sbjct: 1500 tggaatctcacatgtcaaaggttctgaaagcggatgatgttgatccgatgatcattgctc 1559 Query: 241 ggggaacacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctca 300 || | |||||||||||||| ||||| ||||||||||| |||| ||||| ||||| |||| Sbjct: 1560 ggtgtacacctggtttctctggtgctgaccttgcaaatttggttaatgttgctgccctca 1619 Query: 301 aggctgccatggatgg 316 |||||| ||| |||| Sbjct: 1620 gggctgcaatgaatgg 1635
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 89.7 bits (45), Expect = 8e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 213 gacgatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagacctt 272 |||||||| || ||||||| || ||| || | |||||||||||||| ||||| |||||| Sbjct: 49508 gacgatgttgacctgatgatcactgctcggtgtacacctggtttctctggtgctgacctt 49567 Query: 273 gcaaacctggtgaatgtggctgctctcaaggctgccatgga 313 |||||| |||| ||||||||||| ||||||||||| ||||| Sbjct: 49568 gcaaacttggttaatgtggctgccctcaaggctgcaatgga 49608 Score = 89.7 bits (45), Expect = 8e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||| |||| ||||| |||||| |||| |||||||||||||| ||||| ||||||||| Sbjct: 30590 gatgttgatccgatgatcattgctcggggtacacctggtttctccggtgctgaccttgca 30649 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatgg 316 ||| |||| ||||| ||||| || |||||||| |||||||| Sbjct: 30650 aacttggttaatgttgctgccctgaaggctgcaatggatgg 30690 Score = 40.1 bits (20), Expect = 6.2 Identities = 71/88 (80%) Strand = Plus / Plus Query: 117 cctgggcggtttgaccgtcatatcgtggttcctaatccagatgttgagggccgacgccag 176 |||||||| ||||| || ||| | || ||||| ||||||||||| || || || || ||| Sbjct: 49058 cctgggcgatttgatcgccatgttgttgttcccaatccagatgtagaaggacgccgacag 49117 Query: 177 atcctggagactcatatgtcaaaggtgt 204 || |||| |||| ||||||||||||| Sbjct: 49118 attttggaatctcacatgtcaaaggtgt 49145 Score = 40.1 bits (20), Expect = 6.2 Identities = 125/160 (78%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| || || || ||||||||||| | ||||| || || || ||||| || | Sbjct: 30038 tgaagatgactttaaatcaaatgcttgttgagttagatggattcaaacaaaatgaaggca 30097 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| |||| || || ||||| || || ||||| ||||| || | || || |||| Sbjct: 30098 taattgtgcttgctgctactaacttacctcaatcactagataaggctttggtgagacctg 30157 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgt 160 |||| ||||| || ||| | || ||||| ||||||||||| Sbjct: 30158 ggcgatttgatcgccatgttgttgttcccaatccagatgt 30197
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 89.7 bits (45), Expect = 8e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 216 gatgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgca 275 ||||| |||| ||||| |||||| |||| |||||||||||||| ||||| ||||||||| Sbjct: 111350 gatgttgatccgatgatcattgctcggggtacacctggtttctccggtgctgaccttgca 111409 Query: 276 aacctggtgaatgtggctgctctcaaggctgccatggatgg 316 ||| |||| ||||| ||||| || |||||||| |||||||| Sbjct: 111410 aacttggttaatgttgctgccctgaaggctgcaatggatgg 111450 Score = 40.1 bits (20), Expect = 6.2 Identities = 125/160 (78%) Strand = Plus / Plus Query: 1 tgaagatgaccttgaaccagttgcttgttgagctggatggctttaagcagaatgatggga 60 |||||||||| || || || ||||||||||| | ||||| || || || ||||| || | Sbjct: 110798 tgaagatgactttaaatcaaatgcttgttgagttagatggattcaaacaaaatgaaggca 110857 Query: 61 taattgtaattgcagcaacaaacttcccccagtcactggataaagcccttgtaaggcctg 120 ||||||| |||| || || ||||| || || ||||| ||||| || | || || |||| Sbjct: 110858 taattgtgcttgctgctactaacttacctcaatcactagataaggctttggtgagacctg 110917 Query: 121 ggcggtttgaccgtcatatcgtggttcctaatccagatgt 160 |||| ||||| || ||| | || ||||| ||||||||||| Sbjct: 110918 ggcgatttgatcgccatgttgttgttcccaatccagatgt 110957
>gb|AY277738.1| Lycopersicon esculentum putative FtsH protease mRNA, complete cds Length = 2746 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 187 ctcatatgtcaaaggtgttgaaagccgacgatgtggatctgatgaccattgccaggggaa 246 |||| ||||||||| | |||| || || ||||| || || |||| |||||| |||| | Sbjct: 1364 ctcacatgtcaaagattctgaaggcggatgatgttgaccttatgatcattgctcggggga 1423 Query: 247 cacctggtttctcaggtgcagaccttgcaaacctggtgaatgtggctgctctcaaggctg 306 | ||||| || || |||||||||||||||||| |||||||| | |||||| | ||||||| Sbjct: 1424 ctcctggattttctggtgcagaccttgcaaacttggtgaatatcgctgctgtgaaggctg 1483 Query: 307 ccatggatgg 316 | |||||||| Sbjct: 1484 ctatggatgg 1493 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 21 ttgcttgttgagctggatggctttaagcagaatgatgggataattgtaattgc 73 |||||||| |||||||||||||| || || |||||||| || ||||| ||||| Sbjct: 1198 ttgcttgtcgagctggatggcttcaaacaaaatgatggaatcattgtgattgc 1250
>gb|AY110343.1| Zea mays CL56358_1 mRNA sequence Length = 1226 Score = 63.9 bits (32), Expect = 4e-07 Identities = 105/130 (80%) Strand = Plus / Minus Query: 264 gcagaccttgcaaacctggtgaatgtggctgctctcaaggctgccatggatggggcaaaa 323 ||||| ||||| ||| |||||||||| |||| | | |||| || ||||||| |||||| Sbjct: 1226 gcagatcttgcgaacttggtgaatgtagctgttttggaggccgctatggatgaagcaaaa 1167 Query: 324 tctgtttctatgaccgacctcgagtttgccaaggacaggatcatgatgggcagcgaacgc 383 ||||| | ||| ||||| || | ||| ||||||||||||||||||||||| || ||| Sbjct: 1166 gctgttacgatgcaggaccttgaatatgcgaaggacaggatcatgatgggcagngagcgc 1107 Query: 384 anatcagcag 393 | |||||||| Sbjct: 1106 aaatcagcag 1097
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 217 atgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgcaa 276 |||| |||||||||| |||||| || | |||||||| ||||| ||||| |||||||||| Sbjct: 33512 atgttgatctgatgatcattgctcggtgtacacctgggttctctggtgctgaccttgcaa 33453 Query: 277 acctggtgaatgtggctgctctcaaggctgccatggatgg 316 || |||| |||| ||||| || | |||||| | |||||| Sbjct: 33452 acttggttgatgttgctgccctgagggctgcaaaggatgg 33413 Score = 48.1 bits (24), Expect = 0.026 Identities = 81/100 (81%) Strand = Plus / Minus Query: 217 atgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgcaa 276 |||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||||| Sbjct: 12256 atgttgatctgatgaccattgctcggtttacccctgggttctctggtgctgaccttgcaa 12197 Query: 277 acctggtgaatgtggctgctctcaaggctgccatggatgg 316 || |||| ||| | ||||| || | |||||| | |||||| Sbjct: 12196 acttggttaatattgctgccctgagggctgcaaaggatgg 12157
>ref|NM_111027.2| Arabidopsis thaliana CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT3G01610 (CDC48C) mRNA, complete cds Length = 2731 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttgagctggatgg 40 ||||||||||| ||||||||||||||||| Sbjct: 2081 ttgaaccagtttcttgttgagctggatgg 2109
>ref|NM_125277.2| Arabidopsis thaliana FTSH9; ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G58870 (FTSH9) mRNA, complete cds Length = 2750 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 264 gcagaccttgcaaacctggtgaatgtggctgct 296 |||||||||||||||||||| |||| ||||||| Sbjct: 1676 gcagaccttgcaaacctggttaatgaggctgct 1708
>ref|XM_965166.1| PREDICTED: Tribolium castaneum similar to CG3499-PB (LOC658809), mRNA Length = 2151 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 291 gctgctctcaaggctgccatggatggggc 319 |||||||||||||||||||| |||||||| Sbjct: 1462 gctgctctcaaggctgccatcgatggggc 1490
>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 9/10 Length = 349115 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 8 gaccttgaaccagttgcttgttgagctggatggcttt 44 |||| ||||||||||||| |||||| ||||||||||| Sbjct: 48592 gaccctgaaccagttgctcgttgagatggatggcttt 48556
>gb|AY136443.1| Arabidopsis thaliana putative cell division control protein (At3g01610) mRNA, complete cds Length = 2627 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttgagctggatgg 40 ||||||||||| ||||||||||||||||| Sbjct: 1978 ttgaaccagtttcttgttgagctggatgg 2006
>gb|AY059856.1| Arabidopsis thaliana cell division protein FtsH (K19M22.7) mRNA, complete cds Length = 2751 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 264 gcagaccttgcaaacctggtgaatgtggctgct 296 |||||||||||||||||||| |||| ||||||| Sbjct: 1676 gcagaccttgcaaacctggttaatgaggctgct 1708
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 8 gaccttgaaccagttgcttgttgagctggatggcttt 44 |||| ||||||||||||| |||||| ||||||||||| Sbjct: 2868871 gaccctgaaccagttgctcgttgagatggatggcttt 2868835
>dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M22 Length = 77758 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 264 gcagaccttgcaaacctggtgaatgtggctgct 296 |||||||||||||||||||| |||| ||||||| Sbjct: 24291 gcagaccttgcaaacctggttaatgaggctgct 24259
>gb|BT002135.1| Arabidopsis thaliana putative cell division control protein (At3g01610) mRNA, complete cds Length = 2515 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttgagctggatgg 40 ||||||||||| ||||||||||||||||| Sbjct: 1942 ttgaaccagtttcttgttgagctggatgg 1970
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 8 gaccttgaaccagttgcttgttgagctggatggctt 43 |||||||||||||||||| |||||| |||| ||||| Sbjct: 314267 gaccttgaaccagttgctcgttgagatggacggctt 314302
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 8 gaccttgaaccagttgcttgttgagctggatggctt 43 |||||||||||||||||| |||||| |||| ||||| Sbjct: 62371 gaccttgaaccagttgctcgttgagatggacggctt 62406
>gb|AC141923.27| Medicago truncatula clone mth2-7f19, complete sequence Length = 116685 Score = 48.1 bits (24), Expect = 0.026 Identities = 81/100 (81%) Strand = Plus / Plus Query: 217 atgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgcaa 276 |||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||||| Sbjct: 8835 atgttgatctgatgaccattgctcggtttacccctgggttctctggtgctgaccttgcaa 8894 Query: 277 acctggtgaatgtggctgctctcaaggctgccatggatgg 316 || |||| ||| | ||||| || | |||||| | |||||| Sbjct: 8895 acttggttaatattgctgccctgagggctgcaaaggatgg 8934
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 13 tgaaccagttgcttgttgagctggatggctt 43 ||||||||||||| |||||| |||||||||| Sbjct: 1024745 tgaaccagttgctggttgagatggatggctt 1024775 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 338 cgacctcgagtttgccaaggacaggatcatgatggg 373 |||| ||||| | |||||||||| |||||||||||| Sbjct: 1025070 cgacttcgagatggccaaggacaagatcatgatggg 1025105
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3318059 cctggtttctccggtgctgacctggcgaacctggtgaa 3318022
>ref|NM_124696.2| Arabidopsis thaliana FTSH11; ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G53170 (FTSH11) mRNA, complete cds Length = 2778 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 cttgttgagctggatggctttaagcagaatgatgggataattgtaattgcagcaacaaac 83 |||||||| ||||||| ||| |||||||||| || ||||| || || || ||||||||| Sbjct: 1534 cttgttgaaatggatggttttgagcagaatgagggaataatagttatggctgcaacaaac 1593 Query: 84 tt 85 || Sbjct: 1594 tt 1595
>emb|CR932959.2| Medicago truncatula chromosome 5 clone mte1-55f11, COMPLETE SEQUENCE Length = 102868 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Minus Query: 217 atgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgcaa 276 |||| ||||||||||||||||| || |||||||| ||||| || || |||||||||| Sbjct: 69591 atgttgatctgatgaccattgctcggtttacacctgggttctctggagctgaccttgcaa 69532 Query: 277 ac 278 || Sbjct: 69531 ac 69530
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3759508 cctggtttctccggtgctgacctggcgaacctggtgaa 3759471
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence Length = 83007 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 217 atgtggatctgatgaccattgccaggggaacacctggtttctcaggtgcagaccttgcaa 276 |||| ||||||||||||||||| || |||||||| ||||| || || |||||||||| Sbjct: 69391 atgttgatctgatgaccattgctcggtttacacctgggttctctggagctgaccttgcaa 69450 Query: 277 ac 278 || Sbjct: 69451 ac 69452
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3545706 cctggtttctccggtgctgacctggcgaacctggtgaa 3545669
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3323898 cctggtttctccggtgctgacctggcgaacctggtgaa 3323861
>gb|AY123027.1| Arabidopsis thaliana putative FtsH protease (At5g53170) mRNA, complete cds Length = 2452 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 cttgttgagctggatggctttaagcagaatgatgggataattgtaattgcagcaacaaac 83 |||||||| ||||||| ||| |||||||||| || ||||| || || || ||||||||| Sbjct: 1453 cttgttgaaatggatggttttgagcagaatgagggaataatagttatggctgcaacaaac 1512 Query: 84 tt 85 || Sbjct: 1513 tt 1514
>gb|AY091086.1| Arabidopsis thaliana putative FtsH protease (At5g53170) mRNA, complete cds Length = 2715 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 cttgttgagctggatggctttaagcagaatgatgggataattgtaattgcagcaacaaac 83 |||||||| ||||||| ||| |||||||||| || ||||| || || || ||||||||| Sbjct: 1482 cttgttgaaatggatggttttgagcagaatgagggaataatagttatggctgcaacaaac 1541 Query: 84 tt 85 || Sbjct: 1542 tt 1543
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3325731 cctggtttctccggtgctgacctggcgaacctggtgaa 3325694
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3309176 cctggtttctccggtgctgacctggcgaacctggtgaa 3309139
>dbj|AK173753.1| Ciona intestinalis cDNA, clone:citb001f21, full insert sequence Length = 2525 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 accttgaaccagttgcttgttgagctggatggctttaa 46 |||||||||||||||||||| || ||||||| ||||| Sbjct: 1280 accttgaaccagttgcttgtagaaatggatggttttaa 1317
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes Length = 372438 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 106628 cctggtttctccggtgctgacctggcgaacctggtgaa 106591
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 4135590 cctggtttctccggtgctgacctggcgaacctggtgaa 4135553
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 4068374 cctggtttctccggtgctgacctggcgaacctggtgaa 4068337
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 3117281 cctggtttctccggtgctgacctggcgaacctggtgaa 3117244
>gb|U01376.1|U01376 Escherichia coli K12 ampicillin-binding protein (dacB), transcription elongation factor (greA), regulatory protein (mrsF), ATP-binding protein (mrsC), dihydropteroate synthase, regulatory protein (mrsA), and membrane protein genes, complete cds Length = 9097 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 4832 cctggtttctccggtgctgacctggcgaacctggtgaa 4869
>gb|M83138.1|ECOFTSHJA E.coli ftsH and ftsJ genes, complete cds Length = 2950 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 249 cctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||||||||| ||||| ||||| || ||||||||||| Sbjct: 1926 cctggtttctccggtgctgacctggcgaacctggtgaa 1963
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gtggctgctctcaaggctgcc 308 ||||||||||||||||||||| Sbjct: 11874 gtggctgctctcaaggctgcc 11854
>gb|AE013181.1| Thermoanaerobacter tengcongensis MB4, section 208 of 244 of the complete genome Length = 13610 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 51 aatgatgggataattgtaattgcagcaacaaac 83 ||||| |||||||| ||||||||||| |||||| Sbjct: 8187 aatgaagggataatcgtaattgcagctacaaac 8155 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 105 gcccttgtaaggcctgggcggtttgaccgtcatatcgtggt 145 |||||| ||||||||||| |||||||| | ||||| ||||| Sbjct: 8133 gcccttttaaggcctgggaggtttgacaggcatattgtggt 8093
>ref|XM_806628.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053506327.80) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 gccatggatggggcaaaatctgttt 330 ||||||||||||||||||| ||||| Sbjct: 1726 gccatggatggggcaaaatatgttt 1750
>ref|XM_811081.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053509599.157) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 gccatggatggggcaaaatctgttt 330 ||||||||||||||||||| ||||| Sbjct: 1726 gccatggatggggcaaaatatgttt 1750
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgcagaccttgcaaacctggtgaa 286 ||||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 1139598 acacccggattctctggtgcagaccttgctaacctagtgaa 1139638
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tgaagatgaccttgaaccagt 21 ||||||||||||||||||||| Sbjct: 941936 tgaagatgaccttgaaccagt 941916
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 8 gaccttgaaccagttgcttgttgagctggatggcttt 44 |||||| |||||||||||||| || ||||||||||| Sbjct: 1695140 gaccttaaaccagttgcttgtcgaaatggatggcttt 1695104
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 15 aaccagttgcttgttgagctggatggctt 43 ||||||||||| |||||| |||||||||| Sbjct: 966436 aaccagttgctggttgagatggatggctt 966464 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 966772 gccaaggacaagatcatgatgggc 966795
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 400 ccgacgaaagcaggaaaatgactgc 424 |||||||||||||||| |||||||| Sbjct: 5355811 ccgacgaaagcaggaatatgactgc 5355787
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggcagcga 379 |||||||||| | |||||||||||||||| Sbjct: 2224777 gccaaggacaaggtcatgatgggcagcga 2224749
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 attgtaattgcagcaacaaac 83 ||||||||||||||||||||| Sbjct: 1914907 attgtaattgcagcaacaaac 1914887
>emb|BX293547.6| Zebrafish DNA sequence from clone CH211-142E24 in linkage group 20, complete sequence Length = 157145 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ttgtaattgcagcaacaaact 84 ||||||||||||||||||||| Sbjct: 79648 ttgtaattgcagcaacaaact 79628
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gtggctgctctcaaggctgcc 308 ||||||||||||||||||||| Sbjct: 192234 gtggctgctctcaaggctgcc 192214
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 13 tgaaccagttgcttgttgagctggatggcttt 44 |||| |||||||||||||| ||||||||||| Sbjct: 9212 tgaatcagttgcttgttgaaatggatggcttt 9243
>gb|AC140447.3| Mus musculus BAC clone RP23-53E23 from chromosome 9, complete sequence Length = 158157 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gcaggaaaatgactgcatac 428 |||||||||||||||||||| Sbjct: 80892 gcaggaaaatgactgcatac 80873
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 5065759 gccaaggacaagatcatgatgggc 5065736
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 4980717 gccaaggacaagatcatgatgggc 4980694
>ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, centromeric (IR2@) on chromosome Y Length = 389013 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 aacacctggtttctcaggtg 264 |||||||||||||||||||| Sbjct: 387314 aacacctggtttctcaggtg 387333
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 4785223 gccaaggacaagatcatgatgggc 4785200
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 237190 gccaaggacaagatcatgatgggc 237167
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ccagttgcttgttgagctggatgg 40 |||||| ||||||||||||||||| Sbjct: 56327 ccagtttcttgttgagctggatgg 56350
>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence Length = 208152 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ttgttgagctggatggcttt 44 |||||||||||||||||||| Sbjct: 39333 ttgttgagctggatggcttt 39314
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 525792 acacctggtttctcaggtgc 525811
>gb|AC129510.15| Homo sapiens chromosome 17, clone RP11-1376P16, complete sequence Length = 83521 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaacttcccccagtcactgg 99 |||||||||||||||||||| Sbjct: 32019 aaacttcccccagtcactgg 32038
>dbj|AB217916.1| Lycopersicon esculentum LeftsH6 mRNA for FtsH protease, complete cds Length = 2213 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 ggtgcagaccttgcaaacctggtgaatg 288 |||||||| |||||||||||| |||||| Sbjct: 1315 ggtgcagatcttgcaaacctgatgaatg 1342
>dbj|AK125941.1| Homo sapiens cDNA FLJ43953 fis, clone TESTI4015477 Length = 3333 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaacttcccccagtcactgg 99 |||||||||||||||||||| Sbjct: 2831 aaacttcccccagtcactgg 2850
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 3643619 gccaaggacaagatcatgatgggc 3643596
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 566226 acacctggtttctcaggtgc 566245
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 564814 acacctggtttctcaggtgc 564833
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 484487 acacctggtttctcaggtgc 484506
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 548559 acacctggtttctcaggtgc 548578
>dbj|AK039342.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330027N23 product:unclassifiable, full insert sequence Length = 1915 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tgccatggatggggcaaaat 324 |||||||||||||||||||| Sbjct: 858 tgccatggatggggcaaaat 839
>gb|BC109760.1| Bos taurus cDNA clone IMAGE:8061139 Length = 1008 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggtgaatgtggctgctctca 300 |||||||||||||||||||| Sbjct: 244 ggtgaatgtggctgctctca 225
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttga 31 |||||||||||||||||||| Sbjct: 18575328 ttgaaccagttgcttgttga 18575347
>gb|AC021107.3|AC021107 Homo sapiens BAC clone RP11-178M5 from Y, complete sequence Length = 160601 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 aacacctggtttctcaggtg 264 |||||||||||||||||||| Sbjct: 119033 aacacctggtttctcaggtg 119052
>gb|AE004888.1| Pseudomonas aeruginosa PAO1, section 449 of 529 of the complete genome Length = 14623 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 13327 gccaaggacaagatcatgatgggc 13304
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 527161 acacctggtttctcaggtgc 527180
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 541979 acacctggtttctcaggtgc 541998
>emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chromosome X, complete sequence Length = 159892 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tgccatggatggggcaaaat 324 |||||||||||||||||||| Sbjct: 112322 tgccatggatggggcaaaat 112303
>emb|BX649099.1|HSM809250 Homo sapiens mRNA; cDNA DKFZp686L08123 (from clone DKFZp686L08123) Length = 11647 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaacttcccccagtcactgg 99 |||||||||||||||||||| Sbjct: 2117 aaacttcccccagtcactgg 2098
>dbj|AK119842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-C11, full insert sequence Length = 3160 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ctcgagtttgccaaggacaggatcatgatggg 373 ||||||| |||||||||| |||||||||||| Sbjct: 2138 ctcgagtgggccaaggacaagatcatgatggg 2169
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 818092 gccaaggacaagatcatgatgggc 818115 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 8 gaccttgaaccagttgcttgttgagctggatggctt 43 |||| ||||||||||||| || ||| |||||||||| Sbjct: 817749 gaccctgaaccagttgctggtcgagatggatggctt 817784
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 551182 acacctggtttctcaggtgc 551201
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 5365377 gccaaggacaagatcatgatgggc 5365354
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gccaaggacaggatcatgatgggc 374 |||||||||| ||||||||||||| Sbjct: 4094914 gccaaggacaagatcatgatgggc 4094891
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttga 31 |||||||||||||||||||| Sbjct: 18501554 ttgaaccagttgcttgttga 18501573
>emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa0072A13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130954 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ttgaaccagttgcttgttga 31 |||||||||||||||||||| Sbjct: 19962 ttgaaccagttgcttgttga 19943
>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 180599 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttgaaccagttgcttgttga 31 |||||||||||||||||||| Sbjct: 8780 ttgaaccagttgcttgttga 8799
>gb|AF007146.1|AF007146 Homo sapiens clone 23686 and 23885 mRNA sequences Length = 2015 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaacttcccccagtcactgg 99 |||||||||||||||||||| Sbjct: 1478 aaacttcccccagtcactgg 1497
>gb|AC149064.3| Mus musculus BAC clone RP23-140I7 from 18, complete sequence Length = 183953 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttgttgagctggatggcttt 44 |||||||||||||||||||| Sbjct: 21074 ttgttgagctggatggcttt 21093
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acacctggtttctcaggtgc 265 |||||||||||||||||||| Sbjct: 508639 acacctggtttctcaggtgc 508658
>emb|AL772335.5| Mouse DNA sequence from clone RP23-415F19 on chromosome 4, complete sequence Length = 201702 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gaaagcaggaaaatgactgc 424 |||||||||||||||||||| Sbjct: 180678 gaaagcaggaaaatgactgc 180659
>dbj|AK074059.1| Homo sapiens mRNA for FLJ00130 protein Length = 5209 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaacttcccccagtcactgg 99 |||||||||||||||||||| Sbjct: 4696 aaacttcccccagtcactgg 4715 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,620,384 Number of Sequences: 3902068 Number of extensions: 3620384 Number of successful extensions: 71213 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 70461 Number of HSP's gapped (non-prelim): 744 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
