ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
2dbj|AK066195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
3dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
4dbj|AK060406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
5gb|AY103824.1| Zea mays PCO135715 mRNA sequence 127 3e-26
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
7dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
8dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
9gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence 54 4e-04
10gb|AC125392.15| Pan troglodytes clone rp43-143k16, complete sequ... 44 0.39
11gb|AC083826.7| Homo sapiens BAC clone RP11-289C17 from 4, comple... 44 0.39
12gb|AY109572.1| Zea mays CL1008_1 mRNA sequence 44 0.39
13dbj|AP001860.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 44 0.39
14gb|AY680699.1| Vitis vinifera chloroplast chaperonin 21 (cpn21) ... 42 1.5
15gb|AC132881.10| Mus musculus chromosome 14, clone RP24-246K16, c... 42 1.5
16gb|AC158394.2| Mus musculus BAC clone RP23-406A1 from chromosome... 42 1.5
17gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 h... 42 1.5
18dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.5
19gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
20gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome ... 40 6.1
21ref|XM_464152.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
22ref|XM_464158.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
23gb|AC161492.4| Mus musculus chromosome 18, clone RP24-154C3, com... 40 6.1
24ref|XM_322538.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
25ref|XM_951679.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
26gb|AC154422.2| Mus musculus BAC clone RP24-218O2 from chromosome... 40 6.1
27emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chr... 40 6.1
28gb|AC100797.4| Homo sapiens chromosome 8, clone RP11-43A14, comp... 40 6.1
29gb|AC023891.28| Homo sapiens 3 BAC RP13-81O8 (Roswell Park Cance... 40 6.1
30emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
31emb|CR382384.18| Zebrafish DNA sequence from clone CH211-15B7 in... 40 6.1
32gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 ... 40 6.1
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34gb|AC069257.28| Homo sapiens 3 BAC RP11-447L10 (Roswell Park Can... 40 6.1
35gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Can... 40 6.1
36dbj|AK059340.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
37gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete... 40 6.1
38gb|U42224.1|HSGHRH3 Human growth hormone releasing hormone gene,... 40 6.1 
>dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G10, full
           insert sequence
          Length = 1129

 Score =  172 bits (87), Expect = 6e-40
 Identities = 171/199 (85%)
 Strand = Plus / Plus

                                                                       
Query: 249 tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcaccccc 308
           ||||| ||||||||| |||| |||||||| || ||||| || ||||| ||||||||||| 
Sbjct: 287 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccca 346

                                                                       
Query: 309 aagtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggctgag 368
           |||||||| || |||||||||||||||||||||||||||||||||||| | || || |||
Sbjct: 347 aagtatacctcgctcaagcctctgggagacagagtgcttgtgaagcttggtgctgcagag 406

                                                                       
Query: 369 gagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagggaggc 428
           ||||||||  |||| || ||  ||||||| ||  |||| |||||||||||||||||||| 
Sbjct: 407 gagaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggt 466

                              
Query: 429 gagatcgttgctgttggag 447
           ||| | |||||||||||||
Sbjct: 467 gaggttgttgctgttggag 485



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 156 atgtcgtcggtgcagctctctggtgccgg 184
           |||||||||||||||||||| ||||||||
Sbjct: 179 atgtcgtcggtgcagctctccggtgccgg 207
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>dbj|AK066195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052L05, full
           insert sequence
          Length = 1028

 Score =  172 bits (87), Expect = 6e-40
 Identities = 171/199 (85%)
 Strand = Plus / Plus

                                                                       
Query: 249 tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcaccccc 308
           ||||| ||||||||| |||| |||||||| || ||||| || ||||| ||||||||||| 
Sbjct: 288 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccca 347

                                                                       
Query: 309 aagtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggctgag 368
           |||||||| || |||||||||||||||||||||||||||||||||||| | || || |||
Sbjct: 348 aagtatacctcgctcaagcctctgggagacagagtgcttgtgaagcttggtgctgcagag 407

                                                                       
Query: 369 gagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagggaggc 428
           ||||||||  |||| || ||  ||||||| ||  |||| |||||||||||||||||||| 
Sbjct: 408 gagaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggt 467

                              
Query: 429 gagatcgttgctgttggag 447
           ||| | |||||||||||||
Sbjct: 468 gaggttgttgctgttggag 486



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 156 atgtcgtcggtgcagctctctggtgccgg 184
           |||||||||||||||||||| ||||||||
Sbjct: 180 atgtcgtcggtgcagctctccggtgccgg 208
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>dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K09, full
           insert sequence
          Length = 1130

 Score =  172 bits (87), Expect = 6e-40
 Identities = 171/199 (85%)
 Strand = Plus / Plus

                                                                       
Query: 249 tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcaccccc 308
           ||||| ||||||||| |||| |||||||| || ||||| || ||||| ||||||||||| 
Sbjct: 288 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccca 347

                                                                       
Query: 309 aagtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggctgag 368
           |||||||| || |||||||||||||||||||||||||||||||||||| | || || |||
Sbjct: 348 aagtatacctcgctcaagcctctgggagacagagtgcttgtgaagcttggtgctgcagag 407

                                                                       
Query: 369 gagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagggaggc 428
           ||||||||  |||| || ||  ||||||| ||  |||| |||||||||||||||||||| 
Sbjct: 408 gagaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggt 467

                              
Query: 429 gagatcgttgctgttggag 447
           ||| | |||||||||||||
Sbjct: 468 gaggttgttgctgttggag 486



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 156 atgtcgtcggtgcagctctctggtgccgg 184
           |||||||||||||||||||| ||||||||
Sbjct: 180 atgtcgtcggtgcagctctccggtgccgg 208
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>dbj|AK060406.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D05, full
           insert sequence
          Length = 416

 Score =  127 bits (64), Expect = 3e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                       
Query: 249 tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcaccccc 308
           ||||| ||||||||| |||| |||||||| || ||||| || ||||| ||||||||||| 
Sbjct: 287 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccca 346

                                                           
Query: 309 aagtatacatcactcaagcctctgggagacagagtgcttgtgaagctt 356
           |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagtatacctcgctcaagcctctgggagacagagtgcttgtgaagctt 394



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 156 atgtcgtcggtgcagctctctggtgccgg 184
           |||||||||||||||||||| ||||||||
Sbjct: 179 atgtcgtcggtgcagctctccggtgccgg 207
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>gb|AY103824.1| Zea mays PCO135715 mRNA sequence
          Length = 1388

 Score =  127 bits (64), Expect = 3e-26
 Identities = 169/204 (82%)
 Strand = Plus / Plus

                                                                       
Query: 244 gggtgtgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtca 303
           |||| |||||||| |||||||||  ||||||||| || || || ||||| ||||||||||
Sbjct: 379 gggtctgctcgtcgaggcgctcgatccgtagcctggtcgttaaggctgcaactgtcgtca 438

                                                                       
Query: 304 cccccaagtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcgg 363
           |||| ||||| || ||||| |||||||||||||| || ||||||||||||||| | || |
Sbjct: 439 ccccaaagtacacttcactgaagcctctgggagatagggtgcttgtgaagcttggtgccg 498

                                                                       
Query: 364 ctgaggagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagg 423
           | |||||||||||  |||| || || |||||||||||  | || ||| |||| || || |
Sbjct: 499 cagaggagaagacagttggtggcattttgcttccatctactgcccagactaaaccacaag 558

                                   
Query: 424 gaggcgagatcgttgctgttggag 447
           |||| ||| | |||||||||||||
Sbjct: 559 gaggtgaggttgttgctgttggag 582



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 62  tctcgctcacggcagccggattccg 86
           |||||| ||||||||||||||||||
Sbjct: 198 tctcgcacacggcagccggattccg 222
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 5e-25
 Identities = 119/138 (86%)
 Strand = Plus / Plus

                                                                           
Query: 310     agtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggctgagg 369
               ||||||| || |||||||||||||||||||||||||||||||||||| | || || ||||
Sbjct: 4945630 agtatacctcgctcaagcctctgggagacagagtgcttgtgaagcttggtgctgcagagg 4945689

                                                                           
Query: 370     agaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagggaggcg 429
               |||||||  |||| || ||  ||||||| ||  |||| |||||||||||||||||||| |
Sbjct: 4945690 agaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggtg 4945749

                                 
Query: 430     agatcgttgctgttggag 447
               || | |||||||||||||
Sbjct: 4945750 aggttgttgctgttggag 4945767



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                           
Query: 336     gacagagtgcttgtgaagcttagcgcggctgaggagaagaccattggcggaatcttgctt 395
               ||||||||||||||||||||| | || || |||||||||||  |||| || ||  |||||
Sbjct: 4960776 gacagagtgcttgtgaagcttggtgctgcagaggagaagactgttggtgggattctgctt 4960835

                                                                   
Query: 396     ccatcgtccgcgcagtctaagcctcagggaggcgagatcgttgctgttggag 447
               || ||  |||| |||||||||||||||||||| ||| | |||||||||||||
Sbjct: 4960836 ccgtcaaccgcacagtctaagcctcagggaggtgaggttgttgctgttggag 4960887



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 249     tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcacccc 307
               ||||| ||||||||| |||| |||||||| || ||||| || ||||| |||||||||||
Sbjct: 4945469 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccc 4945527



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 156     atgtcgtcggtgcagctctctggtgccgg 184
               |||||||||||||||||||| ||||||||
Sbjct: 4945361 atgtcgtcggtgcagctctccggtgccgg 4945389
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>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E04
          Length = 170701

 Score =  123 bits (62), Expect = 5e-25
 Identities = 119/138 (86%)
 Strand = Plus / Plus

                                                                          
Query: 310    agtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggctgagg 369
              ||||||| || |||||||||||||||||||||||||||||||||||| | || || ||||
Sbjct: 133113 agtatacctcgctcaagcctctgggagacagagtgcttgtgaagcttggtgctgcagagg 133172

                                                                          
Query: 370    agaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcagggaggcg 429
              |||||||  |||| || ||  ||||||| ||  |||| |||||||||||||||||||| |
Sbjct: 133173 agaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggtg 133232

                                
Query: 430    agatcgttgctgttggag 447
              || | |||||||||||||
Sbjct: 133233 aggttgttgctgttggag 133250



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                          
Query: 336    gacagagtgcttgtgaagcttagcgcggctgaggagaagaccattggcggaatcttgctt 395
              ||||||||||||||||||||| | || || |||||||||||  |||| || ||  |||||
Sbjct: 148259 gacagagtgcttgtgaagcttggtgctgcagaggagaagactgttggtgggattctgctt 148318

                                                                  
Query: 396    ccatcgtccgcgcagtctaagcctcagggaggcgagatcgttgctgttggag 447
              || ||  |||| |||||||||||||||||||| ||| | |||||||||||||
Sbjct: 148319 ccgtcaaccgcacagtctaagcctcagggaggtgaggttgttgctgttggag 148370



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                         
Query: 249    tgctcgtccaggcgctcgtcccgtagcctagttgtcaaagctgccactgtcgtcacccc 307
              ||||| ||||||||| |||| |||||||| || ||||| || ||||| |||||||||||
Sbjct: 132952 tgctcctccaggcgcccgtctcgtagcctcgtcgtcaaggccgccacggtcgtcacccc 133010



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 156    atgtcgtcggtgcagctctctggtgccgg 184
              |||||||||||||||||||| ||||||||
Sbjct: 132844 atgtcgtcggtgcagctctccggtgccgg 132872
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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1172G12
          Length = 171974

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                        
Query: 336  gacagagtgcttgtgaagcttagcgcggctgaggagaagaccattggcggaatcttgctt 395
            ||||||||||||||||||||| | || || |||||||||||  |||| || ||  |||||
Sbjct: 2890 gacagagtgcttgtgaagcttggtgctgcagaggagaagactgttggtgggattctgctt 2949

                                                                
Query: 396  ccatcgtccgcgcagtctaagcctcagggaggcgagatcgttgctgttggag 447
            || ||  |||| |||||||||||||||||||| ||| | |||||||||||||
Sbjct: 2950 ccgtcaaccgcacagtctaagcctcagggaggtgaggttgttgctgttggag 3001
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>gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence
          Length = 974

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 120/151 (79%)
 Strand = Plus / Plus

                                                                       
Query: 297 gtcgtcacccccaagtatacatcactcaagcctctgggagacagagtgcttgtgaagctt 356
           |||||| |||||||||||||| |||| |||||  |||  || ||||||||||| ||| ||
Sbjct: 186 gtcgtcgcccccaagtatacaacacttaagcccttggctgatagagtgcttgtaaagatt 245

                                                                       
Query: 357 agcgcggctgaggagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaag 416
           | | |  | ||||||||||| | ||| ||||||||||| ||  || | || ||||| |  
Sbjct: 246 aactcttccgaggagaagacaactggtggaatcttgctccctacgactgctcagtccaga 305

                                          
Query: 417 cctcagggaggcgagatcgttgctgttggag 447
           ||||| || |||||| | |||||||||||||
Sbjct: 306 cctcaaggtggcgaggtagttgctgttggag 336
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>gb|AC125392.15| Pan troglodytes clone rp43-143k16, complete sequence
          Length = 163615

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    tatctctttcctcctcccctct 64
             ||||||||||||||||||||||
Sbjct: 98279 tatctctttcctcctcccctct 98300
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>gb|AC083826.7| Homo sapiens BAC clone RP11-289C17 from 4, complete sequence
          Length = 129240

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    tatctctttcctcctcccctct 64
             ||||||||||||||||||||||
Sbjct: 58577 tatctctttcctcctcccctct 58598
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>gb|AY109572.1| Zea mays CL1008_1 mRNA sequence
          Length = 1955

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 112/142 (78%)
 Strand = Plus / Plus

                                                                        
Query: 306  cccaagtatacatcactcaagcctctgggagacagagtgcttgtgaagcttagcgcggct 365
            |||||||||||| |||| |||||  |||  || ||||||||||| ||| ||| | |  | 
Sbjct: 1148 cccaagtatacaacacttaagcccttggctgatagagtgcttgtaaagattaactcttcc 1207

                                                                        
Query: 366  gaggagaagaccattggcggaatcttgcttccatcgtccgcgcagtctaagcctcaggga 425
            ||||||||||| | ||| ||||||||||| ||  || | || ||||| |  ||||| || 
Sbjct: 1208 gaggagaagacaactggtggaatcttgctccctacgactgctcagtccagacctcaaggt 1267

                                  
Query: 426  ggcgagatcgttgctgttggag 447
            |||||| | |||||||||||||
Sbjct: 1268 ggcgaggtagttgctgttggag 1289
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>dbj|AP001860.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:343A4, complete
             sequence
          Length = 86519

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    tatctctttcctcctcccctct 64
             ||||||||||||||||||||||
Sbjct: 82792 tatctctttcctcctcccctct 82813
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>gb|AY680699.1| Vitis vinifera chloroplast chaperonin 21 (cpn21) gene, complete
           cds; nuclear gene for chloroplast product
          Length = 2182

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 279 gttgtcaaagctgccactgtcgtcacccccaag 311
           ||||||| |||||||||||| || |||||||||
Sbjct: 136 gttgtcagagctgccactgttgttacccccaag 168
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>gb|AC132881.10| Mus musculus chromosome 14, clone RP24-246K16, complete sequence
          Length = 181352

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    tctctttcctcctcccctctc 65
             |||||||||||||||||||||
Sbjct: 25899 tctctttcctcctcccctctc 25919
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>gb|AC158394.2| Mus musculus BAC clone RP23-406A1 from chromosome 14, complete sequence
          Length = 185214

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 45     tctctttcctcctcccctctc 65
              |||||||||||||||||||||
Sbjct: 177873 tctctttcctcctcccctctc 177893
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>gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 hydroxylase homolog (nidi)
             gene, partial cds; polyketide synthase modules 1 through 7
             (nidA) genes, complete cds; and N-methyltransferase
             homolog gene, partial cds
          Length = 41097

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   tgctcgtccaggcgctcgtcc 269
             |||||||||||||||||||||
Sbjct: 13642 tgctcgtccaggcgctcgtcc 13622
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>dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT17P02, TM0006,
             complete sequence
          Length = 72374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 279   gttgtcaaagctgccactgtcgtcacccc 307
             |||||||||||||||||||| ||| ||||
Sbjct: 64053 gttgtcaaagctgccactgttgtcgcccc 64025
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     tggccttcaacaacaacggc 215
               ||||||||||||||||||||
Sbjct: 3262512 tggccttcaacaacaacggc 3262493
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>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence
          Length = 239812

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    ctctttcctcctcccctctc 65
             ||||||||||||||||||||
Sbjct: 73301 ctctttcctcctcccctctc 73320
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>ref|XM_464152.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cctctgggagacagagtgct 346
           ||||||||||||||||||||
Sbjct: 309 cctctgggagacagagtgct 290
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>ref|XM_464158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1448

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cctctgggagacagagtgct 346
           ||||||||||||||||||||
Sbjct: 632 cctctgggagacagagtgct 613
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>gb|AC161492.4| Mus musculus chromosome 18, clone RP24-154C3, complete sequence
          Length = 171766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gataagatagttgtttagca 144
             ||||||||||||||||||||
Sbjct: 61351 gataagatagttgtttagca 61332
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>ref|XM_322538.1| Neurospora crassa OR74A hypothetical protein (NCU00453.1) partial
           mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   cagcactttcgccgctgctctccg 29
           |||||| |||||||||||||||||
Sbjct: 185 cagcaccttcgccgctgctctccg 208
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>ref|XM_951679.1| Neurospora crassa OR74A hypothetical protein (NCU00453.1) partial
           mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 6   cagcactttcgccgctgctctccg 29
           |||||| |||||||||||||||||
Sbjct: 185 cagcaccttcgccgctgctctccg 208
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>gb|AC154422.2| Mus musculus BAC clone RP24-218O2 from chromosome 13, complete sequence
          Length = 170866

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    ttatctctttcctcctcccctctc 65
             |||||| |||||||||||||||||
Sbjct: 46506 ttatctttttcctcctcccctctc 46529
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>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains the
             TLX1 gene for T-cell leukemia homeobox 1, the 5' end of a
             novel gene, the C10orf1 gene for chromosome 10 open
             reading frame 1 and four CpG islands, complete sequence
          Length = 51099

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gagccaccgcgccggcccgg 116
             ||||||||||||||||||||
Sbjct: 12615 gagccaccgcgccggcccgg 12596
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>gb|AC100797.4| Homo sapiens chromosome 8, clone RP11-43A14, complete sequence
          Length = 200340

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     atctctttcctcctcccctc 63
              ||||||||||||||||||||
Sbjct: 132074 atctctttcctcctcccctc 132093
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>gb|AC023891.28| Homo sapiens 3 BAC RP13-81O8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 144189

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     gcgagccaccgcgccggccc 114
              ||||||||||||||||||||
Sbjct: 111546 gcgagccaccgcgccggccc 111527
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>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
             complete sequence
          Length = 127135

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ggtttatctctttcctcctcccct 62
             |||| |||||||||||||||||||
Sbjct: 87890 ggttgatctctttcctcctcccct 87867
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>emb|CR382384.18| Zebrafish DNA sequence from clone CH211-15B7 in linkage group 8,
             complete sequence
          Length = 124327

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ctgagataagatagttgttt 140
             ||||||||||||||||||||
Sbjct: 56554 ctgagataagatagttgttt 56535
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>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster
             A47934, complete sequence
          Length = 69301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    cgcaggcgagccaccgcgccggcc 113
             |||||||| |||||||||||||||
Sbjct: 26882 cgcaggcgcgccaccgcgccggcc 26905
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 39       ggtttatctctttcctcctcccct 62
                |||| |||||||||||||||||||
Sbjct: 32192201 ggttgatctctttcctcctcccct 32192178
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>gb|AC069257.28| Homo sapiens 3 BAC RP11-447L10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188969

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gagccaccgcgccggcccgg 116
              ||||||||||||||||||||
Sbjct: 171751 gagccaccgcgccggcccgg 171732
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>gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 141736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    tttatctctttcctcctccc 60
             ||||||||||||||||||||
Sbjct: 49119 tttatctctttcctcctccc 49138
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>dbj|AK059340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B04, full
           insert sequence
          Length = 1448

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cctctgggagacagagtgct 346
           ||||||||||||||||||||
Sbjct: 632 cctctgggagacagagtgct 613
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>gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete sequence
          Length = 203921

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     ctctttcctcctcccctctc 65
              ||||||||||||||||||||
Sbjct: 179554 ctctttcctcctcccctctc 179573
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>gb|U42224.1|HSGHRH3 Human growth hormone releasing hormone gene, exon 7
          Length = 1204

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 tctctttcctcctcccctct 64
          ||||||||||||||||||||
Sbjct: 83 tctctttcctcctcccctct 64


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,430,877
Number of Sequences: 3902068
Number of extensions: 3430877
Number of successful extensions: 74489
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74320
Number of HSP's gapped (non-prelim): 166
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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