>PNAA_PRUDU (P81898) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase|
           A (EC 3.5.1.52) (PNGase A) (Glycopeptide N-glycosidase)
           (N-glycanase) [Contains:
           Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
           amidase A light chain (PNGase A small chain)
          Length = 571

 Score =  101 bits (251), Expect = 9e-22
 Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
 Frame = +3

Query: 6   VVLSFSAACAGDQYDRVAAVWLDGSELLRTTTAEPTPEGVSWTVRKEVTRYSALLRSPPA 185
           +VL + A C   Q+DR+  VWL G E+LR+ TAEP P G+ WTV K++TRY +LL+S   
Sbjct: 64  IVLEWKATCRRRQFDRIFGVWLGGVEILRSCTAEPRPNGIVWTVEKDITRYYSLLKSNQ- 122

Query: 186 GVLSVMLENLVNDQYTGVYNVTVSLEFHGIPAYLSQVNPPSSDAGVAHPSPATPTLPDSY 365
             L+V L NL++  YTG+Y+V +SL F+     L+       +            L   Y
Sbjct: 123 -TLAVYLGNLIDKTYTGIYHVNISLHFYPAKEKLNSFQQKLDN------------LASGY 169

Query: 366 FQPADLVLPISE--ATGDGXYWFRIQ 437
              ADL+LPIS      DG  WF +Q
Sbjct: 170 HSWADLILPISRNLPLNDG-LWFEVQ 194

>ZBTB3_HUMAN (Q9H5J0) Zinc finger and BTB domain-containing protein 3|
          Length = 574

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 282 YLSQVNPPSSDAGVAHPSPATPTLPDSYF 368
           +L   +PP +D  +A PS +T T+P +YF
Sbjct: 256 HLRAPHPPVADVSLASPSSSTETIPTNYF 284

>VP9_RDVA (Q85450) Nonstructural protein Pns9|
          Length = 351

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 270 GIPAYLSQVNPPSSDAGVAHPSPATPTLPDSYFQPAD 380
           G+PA L Q +    +  VA+P P+ PT+     QP D
Sbjct: 246 GVPAALPQPDTTDDENPVANPGPSAPTVSKGADQPED 282

>EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 370

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
 Frame = +3

Query: 66  WLDGSEL-LRTTTAEPTPEGVS---WTVRKEVTRYSALLRSPPAGVLS--------VMLE 209
           W++G ++ + TT   P  +G     W +RKE   +  ++ S    ++S        V  +
Sbjct: 199 WMEGKDIRVITTETRPVLQGARLNVWELRKEGIPFKLVVDSAVGLIMSRGMVSKAIVGAD 258

Query: 210 NLVNDQYT----GVYNVTVSLEFHGIPAYLS 290
            +V+  +T    G Y V ++   HG+P Y++
Sbjct: 259 RIVSTGHTANKIGTYMVAMAASRHGVPFYVA 289

>VP9_RDVF (Q85440) Nonstructural protein Pns9|
          Length = 351

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 270 GIPAYLSQVNPPSSDAGVAHPSPATPTLPDSYFQPAD 380
           G+PA L Q +    +  V  P P+TPT+     +P D
Sbjct: 246 GVPAALPQPDTTDDERPVTKPGPSTPTVSKGVDEPED 282

>AAP1_YEAST (P37898) Alanine/arginine aminopeptidase (EC 3.4.11.-)|
          Length = 856

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +3

Query: 180 PAGVLSVMLENLVNDQYTGVYNVTVSLEFHGIPAYLSQVNPPSSDAGVAHPSPATPTLPD 359
           P+  L ++   ++NDQ  G Y    + +  G   Y++     ++DA  A P    P L  
Sbjct: 91  PSAKLEIIFSGILNDQMAGFYRAKYTDKVTGETKYMATTQMEATDARRAFPCFDEPNLKA 150

Query: 360 SY 365
           ++
Sbjct: 151 TF 152

>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 280

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 276 PAYLSQVNPPSSDAGVAHPSPATPTL--PDSYFQPADLVLPISEATGDGXYW 425
           P+Y  Q+ PP++ A  A P+P+TP    P S   PA   LP  ++   G ++
Sbjct: 165 PSYAQQMAPPAAPAAAA-PAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFY 215

>LAMP1_BOVIN (Q05204) Lysosome-associated membrane glycoprotein 1 precursor|
           (LAMP-1) (Chromaffin granule-associated membrane
           glycoprotein IIA) (CD107a antigen) (Fragment)
          Length = 408

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/63 (36%), Positives = 28/63 (44%)
 Frame = +3

Query: 216 VNDQYTGVYNVTVSLEFHGIPAYLSQVNPPSSDAGVAHPSPATPTLPDSYFQPADLVLPI 395
           V++    + NVTV+L    I AYLS  N    +       P TPT P    QPA    P 
Sbjct: 151 VSETQVNMDNVTVTLRDAAIQAYLSSSNFSREETRCEQDLP-TPTTPP---QPAPTPAPA 206

Query: 396 SEA 404
           S A
Sbjct: 207 SPA 209

>CBIG_SALTY (Q05631) Protein cbiG|
          Length = 351

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 78  SELLRTTTAEPTPEGVSWTVRKEVTRYSALLRSPPAGVLSVMLENLVNDQYT 233
           SE LR     P   G + T R+  T Y+AL+     G+   +L  LVND+++
Sbjct: 36  SEKLREEGFIPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFS 87

>SAK1_SCHPO (P48383) Protein sak1|
          Length = 766

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +3

Query: 102 AEPTPEGVSWTVRKE-VTRYSALLRSPPAGVLSVMLENLVNDQYTGVYNVTVSLEFHGIP 278
           + P     +  VRK  VT  S    SPP  +   +L +  N Q    +    + + H +P
Sbjct: 223 SSPASVNAAAIVRKSAVTPSSDPYNSPPPSI--PLLGSQTNLQLAPSF---AAPQAHPLP 277

Query: 279 AYLSQVNPPSSDAGVAHPSPATP---TLPDSYFQP 374
           ++LSQ N P   +  + PSPA P   + P  + QP
Sbjct: 278 SHLSQSNVPPQLSHSSVPSPAPPRSVSQPTYFSQP 312

>ADA19_MOUSE (O35674) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 19) (Meltrin beta)
          Length = 920

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 72  DGSELLRTTTAEPTPEGVSWTVRKEVTRY 158
           DG  ++   T  P P+  SW  RKE+ RY
Sbjct: 368 DGGCIMAAATGHPFPKVFSWCNRKELDRY 396

>DLX5_CHICK (P50577) Homeobox protein DLX-5 (cDlx)|
          Length = 286

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 288 SQVNPP-SSDAGVAHPSPATPTLPDSYFQPADLVLPISEA 404
           S   PP  S A + HPS  +PTLP+S    +D   P   A
Sbjct: 15  SDFQPPFQSAAAMHHPSQESPTLPESSATDSDYYSPTGAA 54

>RL15_SULSO (Q9UX85) 50S ribosomal protein L15P|
          Length = 144

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 336 GWGVRHQHRRRGDLPGR 286
           GWG+R QHR RG   GR
Sbjct: 19  GWGIRGQHRDRGSQGGR 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,297,050
Number of Sequences: 219361
Number of extensions: 708214
Number of successful extensions: 3166
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3159
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)