No.
Definition
Score (bits)
E Value
1 gb|AF181456.1|AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, com...
920
0.0
2 gb|AF043091.1|AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, c...
567
e-158
3 gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome...
50
0.006
4 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.006
5 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
50
0.006
6 gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
44
0.40
7 gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete...
44
0.40
8 gb|AC117261.4| Mus musculus BAC clone RP24-537K7 from chromosome...
44
0.40
9 emb|AJ001086.1|PSINAV Pseudomonas syringae inaV gene
44
0.40
10 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
44
0.40
11 gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
42
1.6
12 gb|AY912791.1| Uncultured forest soil bacterium clone DUNnif400 ...
42
1.6
13 gb|AY912677.1| Uncultured forest soil bacterium clone DUNnif286 ...
42
1.6
14 gb|BC088371.1| Homo sapiens EGF-like-domain, multiple 7, transcr...
40
6.3
15 ref|XM_520374.1| PREDICTED: Pan troglodytes LOC464868 (LOC464868...
40
6.3
16 gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
40
6.3
17 ref|NM_201446.1| Homo sapiens EGF-like-domain, multiple 7 (EGFL7...
40
6.3
18 ref|NM_016215.3| Homo sapiens EGF-like-domain, multiple 7 (EGFL7...
40
6.3
19 gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...
40
6.3
20 gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp...
40
6.3
21 gb|BC012377.1| Homo sapiens EGF-like-domain, multiple 7, transcr...
40
6.3
22 gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com...
40
6.3
23 gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde...
40
6.3
24 gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp...
40
6.3
25 gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosom...
40
6.3
26 gb|AY358903.1| Homo sapiens clone DNA64908 VEMF (UNQ187) mRNA, c...
40
6.3
27 gb|AY358902.1| Homo sapiens clone DNA64907 VEMF (UNQ187) mRNA, c...
40
6.3
28 gb|AY358901.1| Homo sapiens clone DNA30943 VEMF (UNQ187) mRNA, c...
40
6.3
29 emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chr...
40
6.3
30 gb|CP000088.1| Thermobifida fusca YX, complete genome
40
6.3
31 emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom...
40
6.3
32 emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos...
40
6.3
33 emb|AL512735.1|HSM802870 Homo sapiens mRNA; cDNA DKFZp586L2317 (...
40
6.3
34 emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosom...
40
6.3
35 emb|CR616630.1| full-length cDNA clone CS0DI042YB02 of Placenta ...
40
6.3
36 emb|CR615335.1| full-length cDNA clone CS0DC012YP13 of Neuroblas...
40
6.3
37 emb|CR611472.1| full-length cDNA clone CS0DI060YK17 of Placenta ...
40
6.3
38 emb|CR609845.1| full-length cDNA clone CS0DI057YH03 of Placenta ...
40
6.3
39 emb|CR609259.1| full-length cDNA clone CS0DC002YM19 of Neuroblas...
40
6.3
40 dbj|AK091964.1| Homo sapiens cDNA FLJ34645 fis, clone KIDNE20171...
40
6.3
41 emb|CR600602.1| full-length cDNA clone CS0DI069YO05 of Placenta ...
40
6.3
42 emb|CR599039.1| full-length cDNA clone CS0DD009YK21 of Neuroblas...
40
6.3
43 emb|CR594154.1| full-length cDNA clone CS0DB001YH05 of Neuroblas...
40
6.3
44 emb|CR593184.1| full-length cDNA clone CS0DI051YE20 of Placenta ...
40
6.3
45 emb|CR593160.1| full-length cDNA clone CS0DI053YG20 of Placenta ...
40
6.3
46 gb|AE012225.1| Xanthomonas campestris pv. campestris str. ATCC 3...
40
6.3
47 gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Ca...
40
6.3
48 gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
40
6.3
49 gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...
40
6.3
50 dbj|AB179766.1| Alternaria alternata AF-toxin biosynthesis gene ...
40
6.3
51 gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Can...
40
6.3
52 dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
40
6.3
53 emb|BX647866.1|HSM808012 Homo sapiens mRNA; cDNA DKFZp313E1221 (...
40
6.3
54 ref|XM_321528.2| Anopheles gambiae str. PEST ENSANGP00000017400 ...
40
6.3
55 gb|AF186111.1|AF186111 Homo sapiens NOTCH4-like protein (ZNEU1) ...
40
6.3
56 gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...
40
6.3
57 gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...
40
6.3
58 gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete...
40
6.3
>gb|AF181456.1 |AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, complete cds
Length = 1637
Score = 920 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 1 atggccgccaggtgggttacggtgccactggcacgggcacccacgacgctgggggctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atggccgccaggtgggttacggtgccactggcacgggcacccacgacgctgggggctatg 359
Query: 61 gaggctctgggattgcccctcggcacggcggcgccggcactggggttcacgacgccggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaggctctgggattgcccctcggcacggcggcgccggcactggggttcacgacgccggtg 419
Query: 121 gtttggggcacacaaccgggcatggcgccaccggtacccacggaactgggcacacggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtttggggcacacaaccgggcatggcgccaccggtacccacggaactgggcacacggctg 479
Query: 181 ggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggt 539
Query: 241 atgacgccaccggcaccgggatcaccgggacccatggcaccggccacacggccgggtacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atgacgccaccggcaccgggatcaccgggacccatggcaccggccacacggccgggtacg 599
Query: 301 gctccaccggcacagggatcaccgggacacatggtacagggcacacggccgggtatgacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gctccaccggcacagggatcaccgggacacatggtacagggcacacggccgggtatgacg 659
Query: 361 ccaccggcacagggatcgccgggacacatggcaccggccgcacggccgggtacggcggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ccaccggcacagggatcgccgggacacatggcaccggccgcacggccgggtacggcggca 719
Query: 421 ccggcaccgggatcaccgggacccatggcacaggccacactacc 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccggcaccgggatcaccgggacccatggcacaggccacactacc 763
Score = 315 bits (159), Expect = 7e-83
Identities = 278/318 (87%), Gaps = 6/318 (1%)
Strand = Plus / Plus
Query: 149 caccggtacccacggaactgggcacacggctgggtacggctccaccggcaccggaatgac 208
|||||| ||||| || || || |||||||| |||||||||||||||||||| || || ||
Sbjct: 562 caccgggacccatggcaccggccacacggccgggtacggctccaccggcacagggatcac 621
Query: 209 cgggacacatggtacagggcacacggccgggtatgacgccaccggcaccgggatcaccgg 268
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 622 cgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgccgg 681
Query: 269 gacccatggcaccggccacacggccgggtacggctccaccggcacagggatcaccgggac 328
||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 682 gacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccgggac 741
Query: 329 acatggtacagggcacacggccgggta------tgacgccaccggcacagggatcgccgg 382
||||| ||||| ||||| ||||||| || ||||||||||| || ||| ||||
Sbjct: 742 ccatggcacaggccacactaccgggtacggcggtggtgccaccggcaccggaatcaccgg 801
Query: 383 gacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccgggac 442
||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||
Sbjct: 802 gacccatggcaccggccacacgcatgggttgggcggcaccggcaccgggatcaccgggac 861
Query: 443 ccatggcacaggccacac 460
||||||||| ||||||||
Sbjct: 862 ccatggcaccggccacac 879
Score = 246 bits (124), Expect = 5e-62
Identities = 255/299 (85%), Gaps = 6/299 (2%)
Strand = Plus / Plus
Query: 168 gggcacacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacaggg 227
||||||||||| ||||| | | ||||||||||||| || |||||||| ||||| || ||
Sbjct: 524 gggcacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggc 583
Query: 228 cacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggccac 287
|||||||||||||| | | |||||||||| |||||||||||||| ||||| || || |||
Sbjct: 584 cacacggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcac 643
Query: 288 acggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcacacg 347
||||||||||| | | ||||||||||||||||| ||||||||||||| || || | ||||
Sbjct: 644 acggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggccgcacg 703
Query: 348 gccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggccgcacggcc 407
|||||||| | || ||||||||| |||||| ||||||| |||||||| |||| ||| ||
Sbjct: 704 gccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccacactacc 763
Query: 408 gggtacggcgg------caccggcaccgggatcaccgggacccatggcacaggccacac 460
||||||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 764 gggtacggcggtggtgccaccggcaccggaatcaccgggacccatggcaccggccacac 822
Score = 238 bits (120), Expect = 1e-59
Identities = 254/299 (84%), Gaps = 6/299 (2%)
Strand = Plus / Plus
Query: 168 gggcacacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacaggg 227
||||||||||| ||||| | | |||||||||| || || ||||||||||||| || ||
Sbjct: 638 gggcacacggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggc 697
Query: 228 cacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggccac 287
| |||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 698 cgcacggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccac 757
Query: 288 acggccgggtacggct------ccaccggcacagggatcaccgggacacatggtacaggg 341
|| ||||||||||| |||||||||| || ||||||||||| ||||| || ||
Sbjct: 758 actaccgggtacggcggtggtgccaccggcaccggaatcaccgggacccatggcaccggc 817
Query: 342 cacacggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggccgc 401
|||||| |||| | || ||||||||| |||||| ||||||| ||||||||||||| |
Sbjct: 818 cacacgcatgggttgggcggcaccggcaccgggatcaccgggacccatggcaccggccac 877
Query: 402 acggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 460
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 acgaccgggttgggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 936
Score = 190 bits (96), Expect = 3e-45
Identities = 233/279 (83%), Gaps = 6/279 (2%)
Strand = Plus / Plus
Query: 173 cacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacac 232
|||||| ||||||||| |||||||||||| || |||||||| ||||| ||||| |||||
Sbjct: 700 cacggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 759
Query: 233 ggccgggtatgacg------ccaccggcaccgggatcaccgggacccatggcaccggcca 286
||||||| | || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 760 taccgggtacggcggtggtgccaccggcaccggaatcaccgggacccatggcaccggcca 819
Query: 287 cacggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcacac 346
|||| |||| ||| ||||||||| |||||||||||||| ||||| || || |||||
Sbjct: 820 cacgcatgggttgggcggcaccggcaccgggatcaccgggacccatggcaccggccacac 879
Query: 347 ggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggccgcacggc 406
| |||||| | || ||||||||| |||||| ||||||| |||||||| |||| ||||||
Sbjct: 880 gaccgggttgggcggcaccggcaccgggatcaccgggacccatggcacaggccacacggc 939
Query: 407 cgggtacggcggcaccggcaccgggatcaccgggaccca 445
|||| ||||||||||||||||||||||| || |||||
Sbjct: 940 tgggttgggcggcaccggcaccgggatcacaggtaccca 978
>gb|AF043091.1 |AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, complete cds
Length = 3086
Score = 567 bits (286), Expect = e-158
Identities = 298/302 (98%)
Strand = Plus / Plus
Query: 1 atggccgccaggtgggttacggtgccactggcacgggcacccacgacgctgggggctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 atggccgccaggtgggttacggtgccactggcacgggcacccacgacgctgggggctatg 1134
Query: 61 gaggctctgggattgcccctcggcacggcggcgccggcactggggttcacgacgccggtg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 gaggctctgggattgcccctaggcacggcggcgccggcactggggttcacgacgccggtg 1194
Query: 121 gtttggggcacacaaccgggcatggcgccaccggtacccacggaactgggcacacggctg 180
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1195 gtttggggcacacaaccgggcatggcgctaccagtacccacggaactgggcacacggctg 1254
Query: 181 ggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 ggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggt 1314
Query: 241 atgacgccaccggcaccgggatcaccgggacccatggcaccggccacacggccgggtacg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1315 atgacgccaccggcaccgggatcaccgggacccatggcaccggccacacgaccgggtacg 1374
Query: 301 gc 302
||
Sbjct: 1375 gc 1376
Score = 295 bits (149), Expect = 7e-77
Identities = 232/260 (89%), Gaps = 6/260 (2%)
Strand = Plus / Plus
Query: 207 accgggacacatggtacagggcacacggccgggtatgacgccaccggcaccgggatcacc 266
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1380 accgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgcc 1439
Query: 267 gggacccatggcaccggccacacggccgggtacggctccaccggcacagggatcaccggg 326
||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1440 gggacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccggg 1499
Query: 327 acacatggtacagggcacacggccgggta------tgacgccaccggcacagggatcgcc 380
|| ||||| ||||| ||||| ||||||| || ||||||||||| || ||| ||
Sbjct: 1500 acccatggcacaggccacactaccgggtacggcggtggtgccaccggcaccggaatcacc 1559
Query: 381 gggacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccggg 440
||||| ||||||||||||| |||||| |||| |||||||||||||||||||||||||||
Sbjct: 1560 gggacccatggcaccggccacacggctgggttgggcggcaccggcaccgggatcaccggg 1619
Query: 441 acccatggcacaggccacac 460
||||||||||||||||||||
Sbjct: 1620 acccatggcacaggccacac 1639
Score = 287 bits (145), Expect = 2e-74
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 320 caccgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 caccgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgc 1438
Query: 380 cgggacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccgg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 cgggacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccgg 1498
Query: 440 gacccatggcacaggccacactacc 464
|||||||||||||||||||||||||
Sbjct: 1499 gacccatggcacaggccacactacc 1523
Score = 234 bits (118), Expect = 2e-58
Identities = 254/300 (84%), Gaps = 12/300 (4%)
Strand = Plus / Plus
Query: 173 cacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacagggcacac 232
|||||| ||||||||| |||||||||||| || |||||||| ||||| ||||| |||||
Sbjct: 1460 cacggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 1519
Query: 233 ggccgggtatgacg------ccaccggcaccgggatcaccgggacccatggcaccggcca 286
||||||| | || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1520 taccgggtacggcggtggtgccaccggcaccggaatcaccgggacccatggcaccggcca 1579
Query: 287 cacggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcacac 346
|||||| |||| ||| ||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 1580 cacggctgggttgggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 1639
Query: 347 ggccgggtatgacgcc------accggcacagggatcgccgggacacatggcaccggccg 400
| ||||||| | || | |||||||| |||||| ||||||| |||||||| ||||
Sbjct: 1640 gaccgggtacggcggcggcgtcaccggcaccgggatcaccgggacccatggcacaggcca 1699
Query: 401 cacggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 460
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 cacgaccgggttgggcggcaccggcaccgggatcaccgggacccatggcacaggccacac 1759
Score = 234 bits (118), Expect = 2e-58
Identities = 287/344 (83%), Gaps = 12/344 (3%)
Strand = Plus / Plus
Query: 129 cacacaaccgggcatggcgccaccggtacccacggaactgggcacacggctgggtacggc 188
||||| |||||| | |||| |||||| || || || || ||||||||||| ||||| | |
Sbjct: 1359 cacacgaccgggtacggcggcaccgggacacatggtacagggcacacggccgggtatgac 1418
Query: 189 tccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggtatgacgcc 248
|||||||||| || || ||||||||||||| || || | |||||||||||| | || |
Sbjct: 1419 gccaccggcacagggatcgccgggacacatggcaccggccgcacggccgggtacggcggc 1478
Query: 249 accggcaccgggatcaccgggacccatggcaccggccacacggccgggtacggc------ 302
|||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 1479 accggcaccgggatcaccgggacccatggcacaggccacactaccgggtacggcggtggt 1538
Query: 303 tccaccggcacagggatcaccgggacacatggtacagggcacacggccgggtatgacgcc 362
|||||||||| || ||||||||||| ||||| || || |||||||| |||| | || |
Sbjct: 1539 gccaccggcaccggaatcaccgggacccatggcaccggccacacggctgggttgggcggc 1598
Query: 363 accggcacagggatcgccgggacacatggcaccggccgcacggccgggtacggcgg---- 418
|||||||| |||||| ||||||| |||||||| |||| |||| |||||||||||||
Sbjct: 1599 accggcaccgggatcaccgggacccatggcacaggccacacgaccgggtacggcggcggc 1658
Query: 419 --caccggcaccgggatcaccgggacccatggcacaggccacac 460
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 gtcaccggcaccgggatcaccgggacccatggcacaggccacac 1702
Score = 206 bits (104), Expect = 5e-50
Identities = 131/140 (93%)
Strand = Plus / Plus
Query: 285 cacacggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcac 344
|||||||| |||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 1245 cacacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacagggcac 1304
Query: 345 acggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggccgcacg 404
|||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||
Sbjct: 1305 acggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggccacacg 1364
Query: 405 gccgggtacggcggcaccgg 424
|||||||||||||||||||
Sbjct: 1365 accgggtacggcggcaccgg 1384
Score = 200 bits (101), Expect = 3e-48
Identities = 223/264 (84%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 190 ccaccggcaccggaatgaccgggacacatggtacagggcacacggccgggtatgacgcca 249
|||||||||||||||| |||||||| ||||| || || |||||||| |||| | || ||
Sbjct: 1540 ccaccggcaccggaatcaccgggacccatggcaccggccacacggctgggttgggcggca 1599
Query: 250 ccggcaccgggatcaccgggacccatggcaccggccacacggccgggtacggctcc---- 305
||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 1600 ccggcaccgggatcaccgggacccatggcacaggccacacgaccgggtacggcggcggcg 1659
Query: 306 --accggcacagggatcaccgggacacatggtacagggcacacggccgggtatgacgcca 363
|||||||| |||||||||||||| ||||| ||||| |||||| |||||| | || ||
Sbjct: 1660 tcaccggcaccgggatcaccgggacccatggcacaggccacacgaccgggttgggcggca 1719
Query: 364 ccggcacagggatcgccgggacacatggcaccggccgcacggccgggtacggcggcaccg 423
||||||| |||||| ||||||| |||||||| |||| ||| || |||| |||||||| |
Sbjct: 1720 ccggcaccgggatcaccgggacccatggcacaggccacacagctgggttgggcggcacag 1779
Query: 424 gcaccgggatcaccgggacccatg 447
||||||||||||| || |||||||
Sbjct: 1780 gcaccgggatcacaggtacccatg 1803
Score = 168 bits (85), Expect = 1e-38
Identities = 174/204 (85%), Gaps = 6/204 (2%)
Strand = Plus / Plus
Query: 263 caccgggacccatggcaccggccacacggccgggtacggctccaccggcacagggatcac 322
||||||||| ||||| || || |||||||||||||| | | ||||||||||||||||| |
Sbjct: 1379 caccgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgc 1438
Query: 323 cgggacacatggtacagggcacacggccgggtatgacgccaccggcacagggatcgccgg 382
|||||||||||| || || | |||||||||||| | || ||||||||| |||||| ||||
Sbjct: 1439 cgggacacatggcaccggccgcacggccgggtacggcggcaccggcaccgggatcaccgg 1498
Query: 383 gacacatggcaccggccgcacggccgggtacggcgg------caccggcaccgggatcac 436
||| |||||||| |||| ||| ||||||||||||| |||||||||||| |||||
Sbjct: 1499 gacccatggcacaggccacactaccgggtacggcggtggtgccaccggcaccggaatcac 1558
Query: 437 cgggacccatggcacaggccacac 460
||||||||||||||| ||||||||
Sbjct: 1559 cgggacccatggcaccggccacac 1582
Score = 115 bits (58), Expect = 1e-22
Identities = 106/122 (86%)
Strand = Plus / Plus
Query: 339 gggcacacggccgggtatgacgccaccggcacagggatcgccgggacacatggcaccggc 398
||||||||||| ||||| | | |||||||||| || || ||||||||||||| || ||
Sbjct: 1242 gggcacacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacaggg 1301
Query: 399 cgcacggccgggtacggcggcaccggcaccgggatcaccgggacccatggcacaggccac 458
| |||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1302 cacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggccac 1361
Query: 459 ac 460
||
Sbjct: 1362 ac 1363
Score = 109 bits (55), Expect = 8e-21
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 225 gggcacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggc 284
||||||||||| ||||| | | ||||||||||||| || |||||||| ||||| || ||
Sbjct: 1242 gggcacacggctgggtacggctccaccggcaccggaatgaccgggacacatggtacaggg 1301
Query: 285 cacacggccgggtacggctccaccggcacagggatcaccgggacacatggtacagggcac 344
|||||||||||||| | | |||||||||| |||||||||||||| ||||| || || |||
Sbjct: 1302 cacacggccgggtatgacgccaccggcaccgggatcaccgggacccatggcaccggccac 1361
Query: 345 acggccgggta 355
||| |||||||
Sbjct: 1362 acgaccgggta 1372
>emb|AL590226.23 | Human DNA sequence from clone RP11-251M1 on chromosome 9 Contains a
novel gene, the gene for NEU1 protein (ZNEU1), the AGPAT2
gene for 1-acylglycerol-3-phosphate O-acyltransferase 2
(lysophosphatidic acid acyltransferase, beta), the 5' end
of the gene for a novel protein similar to mouse
pancreatitis-induced protein 49 (PIP49), the 3' end of a
novel gene (FLJ30346) and seven CpG islands, complete
sequence
Length = 149567
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 438 gggacccatggcacaggcca 457
||||||||||||||||||||
Sbjct: 98637 gggacccatggcacaggcca 98656
>dbj|AB179766.1 | Alternaria alternata AF-toxin biosynthesis gene cluster (Aft9-1,
Aft10-1, Aft11-1, Aft12-1, AftR-2, Aft3-2), complete cds
Length = 37168
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 143 tggcgccaccggtacccacg 162
||||||||||||||||||||
Sbjct: 25289 tggcgccaccggtacccacg 25270
>gb|AE000513.1 | Deinococcus radiodurans R1 chromosome 1, complete sequence
Length = 2648638
Score = 40.1 bits (20), Expect = 6.3
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 85 acggcggcgccggcactggggttc 108
|||||||||| |||||||||||||
Sbjct: 1236487 acggcggcgcaggcactggggttc 1236464
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,124,769
Number of Sequences: 3902068
Number of extensions: 2124769
Number of successful extensions: 52237
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50791
Number of HSP's gapped (non-prelim): 1431
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)