| Clone Name | bast62e08 |
|---|---|
| Clone Library Name | barley_pub |
>KLF16_HUMAN (Q9BXK1) Krueppel-like factor 16 (Transcription factor BTEB4)| (Basic transcription element-binding protein 4) (BTE-binding protein 4) (Novel Sp1-like zinc finger transcription factor 2) (Transcription factor NSLP2) Length = 252 Score = 33.5 bits (75), Expect = 0.28 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 347 PPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQG 192 PPAASG + + L D PG P +P + ++AASSP+ G Sbjct: 62 PPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSG 113
>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 640 Score = 32.3 bits (72), Expect = 0.63 Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = -2 Query: 377 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPL-PDAESPPGTLP*SLAPRTEAAAASSP 201 W P R GA AS +P S S F PHP P P TLP SL A A P Sbjct: 570 WSPGRGAGGAREVAS---SPVSALPSRFCPHPTSPSVPQPGPTLPPSLTAPPPAYATLGP 626
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 32.0 bits (71), Expect = 0.82 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -2 Query: 287 HPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 HP P A SPP T+P P T AAS+ GP Sbjct: 277 HPGPSAGSPPLTVPAIPVPATSVTAASTQPLGP 309
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 32.0 bits (71), Expect = 0.82 Identities = 24/60 (40%), Positives = 26/60 (43%) Frame = -2 Query: 377 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPA 198 W P R +GA AS TP S S F PHP SPP +LP A A PA Sbjct: 620 WSPGRGARGAREVAS---TPASSFPSRFCPHP----TSPPPSLPQQGTTPPLALTAPPPA 672
>SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 698 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/44 (45%), Positives = 22/44 (50%) Frame = -2 Query: 377 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP 246 W P R +GA AS TP S S F PHP SPP +LP Sbjct: 620 WSPGRGARGAREVAS---TPASSFPSRFCPHP----TSPPPSLP 656
>SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 669 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/64 (35%), Positives = 28/64 (43%) Frame = -2 Query: 377 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPA 198 W P R +GA AS T S S F PHP+ + S PG P +P A + Sbjct: 593 WSPGRGGRGAQEVAS---TLASSPPSHFCPHPMSLSLSQPGPAP---SPALTAPPPAYAT 646 Query: 197 QGPR 186 GPR Sbjct: 647 LGPR 650
>GP152_HUMAN (Q8TDT2) Probable G-protein coupled receptor 152 (G-protein coupled| receptor PGR5) Length = 470 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -2 Query: 356 QGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 Q PAAS +PC ++ HP P A P T P A E+ +++ P P Sbjct: 413 QTPAPAASSVPSPCDEASPTPSSHPTPGALEDPATPP---ASEGESPSSTPPEAAP 465
>CT165_MOUSE (Q9DA57) Protein C20orf165 homolog| Length = 226 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -2 Query: 347 PPAASGWRTPCSRSTSAFL-----PHPLPDAESPPGTLP*SLAPRTEAAAA 210 P + GW PCSRS + +L P PL PG LP S + AA+ Sbjct: 99 PLESLGWADPCSRSRAPYLGGPSRPRPLLLCGLSPGVLPISSEAGGKEAAS 149
>SCNNA_BOVIN (P55270) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 650 Score = 30.4 bits (67), Expect = 2.4 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = -2 Query: 377 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPA 198 W P R +G AS TP + S+F PHP + SPP +++P A + Sbjct: 574 WSPGRGGKGTQEVAS---TPAASLPSSFCPHPAFFSSSPPDP---AISPALSAPPPAYAT 627 Query: 197 QGP 189 GP Sbjct: 628 LGP 630
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -2 Query: 287 HPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 HP P A SPP T+P P T A S+ GP Sbjct: 277 HPGPSAGSPPLTVPAIPVPATSVTATSTQPLGP 309
>SOX14_DROME (P40656) Putative transcription factor SOX-14| Length = 472 Score = 30.4 bits (67), Expect = 2.4 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -2 Query: 371 PRRIRQGAPPAASGWRTPCSRSTSAFLP-HPLPDAESPPGTL-P*SLAPRTEAAAASSPA 198 P +R G P TP +T HP P A+S P TL P S +P ++ + +PA Sbjct: 13 PLSLRPGTVPTVPA-TTPARPATITIQRRHPAPKADSTPHTLPPFSPSPSPASSPSPAPA 71 Query: 197 QGP 189 Q P Sbjct: 72 QTP 74
>SOH1_ARATH (Q8VYB1) Probable mediator complex subunit SOH1| Length = 196 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Frame = -2 Query: 329 WRTPCSRSTSAFLPHPLPDA--ESPPGTLP*SLAPRTEAAAASSPAQGP 189 W+ + LP PLP+ PP SL P A AA SPA P Sbjct: 119 WKNYRNNRLKHILPRPLPEPVPPQPPVAPSTSLPPAPSATAALSPALSP 167
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 347 PPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 PP+ + P S P P P + +PP P S AP + A + +P P Sbjct: 70 PPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPP 122 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -2 Query: 284 PLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 P P + SPP +P S AP + A SPA P Sbjct: 303 PTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSP 334 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -2 Query: 350 APPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 APP+ P S P P P + +PP P S AP A S P+ P Sbjct: 74 APPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP-PSPAPPSPPSPAP 126
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 350 APPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSP 201 +PPA +P S S++ P P A T+P S AP T + +P Sbjct: 216 SPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPGSMAP 265
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -2 Query: 287 HPLPDAESP-PGTLP*SLAPRTEAAAASSPAQGP 189 HP P A SP P TLP + +P T AAS+ GP Sbjct: 282 HPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGP 315
>PUM2_MOUSE (Q80U58) Pumilio homolog 2| Length = 1066 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 302 SAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 +AF+P+P + +PPGT P + A AA + PA P Sbjct: 304 AAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP 341
>PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)| Length = 1066 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 302 SAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 +AF+P+P + +PPGT P + A AA + PA P Sbjct: 305 AAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVP 342
>HXB4_MOUSE (P10284) Homeobox protein Hox-B4 (Hox-2.6)| Length = 250 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = -2 Query: 347 PPAASGWRTPCS--RSTSAFLPHPLPDAESPPGTLP*SLAPRT---EAAAASSPAQGPR 186 P AA G R PC+ R + P P P PP P L+PR A A P G R Sbjct: 50 PEAAFGRRAPCTVQRYAACRDPGPPPPPPPPPPPPPPGLSPRAPVQPTAGALLPEPGQR 108
>RUVA_RHIET (Q9L9C4) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 206 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 341 AASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGPRL 183 +A WR+PCSR +A P+P +A + AA + +P GP++ Sbjct: 82 SAPRWRSPCSRPLNARPSSPMP------------IALQDRAAVSRAPGVGPKV 122
>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 667 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -2 Query: 305 TSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 TS LP PLP E+PP +LP S + A ++ AQ P Sbjct: 279 TSLALPPPLPPREAPPPSLPDS-----NSTALATSAQTP 312
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.3 bits (64), Expect = 5.3 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Frame = -2 Query: 353 GAPPAASGWRTPCS----RSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGPR 186 GAPP + TP S P P P + P T P + P AA P GP+ Sbjct: 140 GAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPK 199
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = -2 Query: 359 RQGAPPAASGWRT---PCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 R A PAA G R P R A P+ +PP AP AAAAS P G Sbjct: 100 RPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPS------APAAPAAAASGPRPGA 153 Query: 188 R 186 R Sbjct: 154 R 154
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -2 Query: 392 CKCQGWVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAA 213 CK V + + A PA+S W+ P + P P A +PP P AP +A A Sbjct: 63 CKAPFLVDQSQKLPAVPASS-WKPPPGLAP----PQKAPAASAPPRKAPAVPAPSQKAPA 117 Query: 212 ASSPAQ 195 +P+Q Sbjct: 118 VPAPSQ 123
>DYHC_ANTCR (P39057) Dynein beta chain, ciliary| Length = 4466 Score = 29.3 bits (64), Expect = 5.3 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = +2 Query: 221 PLFSAPETTAESLAAIXXXXXXXXXXXXYYVNMGYAIRTLREELPDVFCEEPSLDIYRED 400 PLF E ESL A+ G I +L +E D+F E S DI++ Sbjct: 806 PLFERKELKKESLLALDDRQDRLKKRYAEITTAGEKIHSLMKENLDLFKAEASSDIWKAY 865 Query: 401 IVFKDPL 421 + + D + Sbjct: 866 VDYVDDM 872
>CITE4_RAT (Q99MA0) Cbp/p300-interacting transactivator 4 (MSG1-related| protein 2) (MRG-2) Length = 179 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 359 RQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SL 237 R APP+A+G +P + A P PLP PP LP +L Sbjct: 88 RMPAPPSAAGGPSPLQPAPGAASPLPLP----PPPPLPPAL 124
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/53 (39%), Positives = 26/53 (49%) Frame = -2 Query: 350 APPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQG 192 AP ++G TP +TSA P PL P T+P S AP A A + A G Sbjct: 284 APAGSAG--TPPLPATSASAPAPL-----VPATVPSSTAPNAAAGGAPNLADG 329
>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2| Length = 915 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = -2 Query: 347 PPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 P A P R+ + P P+ E+P P + AP TE+A A +PA P Sbjct: 100 PSPAPPVHEPPVRAAAQPAPVPVAAGEAPSPLAPETPAPATESAPAVAPAGVP 152
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 28.9 bits (63), Expect = 6.9 Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = -2 Query: 371 PRRIRQG-----APPAA-SGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAA 210 PRR ++G PPA SG R S S LP P D ESP LP E A Sbjct: 990 PRRQQRGDLNCKMPPAEKSGVRAAFSPS----LPSPHGDQESPEACLP------PEPPEA 1039 Query: 209 SSPAQGP 189 S+P Q P Sbjct: 1040 SAPLQNP 1046
>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2333 Score = 28.9 bits (63), Expect = 6.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 199 AGEEAAAASVLGARDYGRVPGGDSASGR 282 +G+E S GA D+GR+P G SG+ Sbjct: 1373 SGKEDLIGSASGALDFGRIPSGTLGSGQ 1400
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -2 Query: 320 PCSRSTSAFLPHPLPDAESPPG-----TLP*SLAPRTEAAAASSPAQGP 189 P S S +A PHPLP A+ PP P LA ++ AA Q P Sbjct: 569 PASPSIAA-APHPLPPAQKPPRPPTTVPTPKPLASPSQTQAAQPATQSP 616
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel [Contains:| Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 284 PLPDAESPPGTLP*SLAPRTEAAAASSPAQGP 189 P P+A +P T P LAP A A +P+ P Sbjct: 1293 PAPEAPAPEPTAPEPLAPEAPAPEAPAPSSPP 1324
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -2 Query: 317 CSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQG 192 C RS+S + + DAE+P P L AAAA++PA G Sbjct: 63 CERSSSEETLNNVGDAETPGTVSPNLLLDGQLAAAAAAPANG 104
>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| Length = 1162 Score = 28.5 bits (62), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Frame = -2 Query: 371 PRRIRQGAPPAA-----SGWRTPCSRSTS-----AFLPHPLPDAESPPG--TLP*SLAPR 228 PR APP A S R+P + + S A LP LP+ + PP P +P Sbjct: 88 PRGPLPAAPPTAPERQPSWERSPAASAPSLPPAAAVLPSKLPEDDEPPARPPAPAGASPL 147 Query: 227 TEAAAASSPAQGPR 186 E AA S P+ Sbjct: 148 AEPAAPPSTPAAPK 161
>GID_SILPO (Q5LST0) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gid Length = 449 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +3 Query: 18 WASLSRPLTSPALGARPPASCGATA 92 W + PLTSPALGA A GA A Sbjct: 132 WIFATGPLTSPALGAAIQAETGAEA 156
>ACS2L_MOUSE (Q99NB1) Acetyl-coenzyme A synthetase 2-like, mitochondrial| precursor (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acetyl-CoA synthetase 2) (AceCS2) (Acyl-CoA synthetase short-chain family member 1) Length = 682 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -2 Query: 335 SGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPA 198 SGW SRST+ LP +P A + PG+ P A AA PA Sbjct: 24 SGWSLSVSRSTATRLPGCVP-AAAQPGSY-----PALSAQAAQEPA 63
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -2 Query: 344 PAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLA-PRTEAAAASSPAQGP 189 P A+ P + S P P P A P P S + P AAA ++P Q P Sbjct: 11 PPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTP 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,112,388 Number of Sequences: 219361 Number of extensions: 986335 Number of successful extensions: 4679 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4617 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)