ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62e08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA Length = 717 Score = 176 bits (89), Expect = 4e-41 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 272 ggcggaggtactacctcaacatggggtacgccatccggacgctgagggaggagctccccg 331 Query: 357 acgtattctgcgaggaacccagccttgacatttacagagaagatattgtcttcaaagatc 416 | || |||| | |||| |||||| | ||||| |||||||| ||||||||||||||||||| Sbjct: 332 atgtcttctccaaggagcccagcttcgacatctacagagatgatattgtcttcaaagatc 391 Query: 417 ctctcagtaaattcgtgggtattgatagctat-aaaggatattctgggc 464 |||||| |||||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 392 ctctcaataaattcgagggcattgataattataaaaggatattctgggc 440
>ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA Length = 903 Score = 97.6 bits (49), Expect = 3e-17 Identities = 140/169 (82%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| | Sbjct: 323 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccccg 382 Query: 357 acgtattctgcgaggaacccagccttgacatttacagagaagatattgtcttcaaagatc 416 || |||| | ||| |||||| | | || |||||||| ||||||||||||||||||| Sbjct: 383 ccgcgttctaccgggagcccagcttccatatctacagagatgatattgtcttcaaagatc 442 Query: 417 ctctcagtaaattcgtgggtattgatagcta-taaaggatattctgggc 464 || ||| ||| ||| ||||||||||| ||| |||||||||||||||| Sbjct: 443 ctatcaataatttcacgggtattgataactacaaaaggatattctgggc 491 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 152 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 211 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 212 tgcgggagaggcggctcccgccgccgctcttctcg 246
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 6652480 ggcggaggtactacctcaacatggggtacgccatccggacgctgagggaggagctccccg 6652539 Query: 357 acgtattctgcgaggaacccagccttgacatttacag 393 | || |||| | |||| |||||| | ||||| ||||| Sbjct: 6652540 atgtcttctccaaggagcccagcttcgacatctacag 6652576 Score = 85.7 bits (43), Expect = 1e-13 Identities = 68/75 (90%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagctat-a 449 |||||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||| | Sbjct: 6653663 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 6653722 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 6653723 aaggatattctgggc 6653737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agaggaggctgccgccgcct 223 |||||||||||||||||||| Sbjct: 21410253 agaggaggctgccgccgcct 21410234
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 4632 ggcggaggtactacctcaacatggggtacgccatccggacgctgagggaggagctccccg 4691 Query: 357 acgtattctgcgaggaacccagccttgacatttacag 393 | || |||| | |||| |||||| | ||||| ||||| Sbjct: 4692 atgtcttctccaaggagcccagcttcgacatctacag 4728 Score = 85.7 bits (43), Expect = 1e-13 Identities = 68/75 (90%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagctat-a 449 |||||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||| | Sbjct: 5815 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 5874 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 5875 aaggatattctgggc 5889
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 132651 ggcggaggtactacctcaacatggggtacgccatccggacgctgagggaggagctccccg 132710 Query: 357 acgtattctgcgaggaacccagccttgacatttacag 393 | || |||| | |||| |||||| | ||||| ||||| Sbjct: 132711 atgtcttctccaaggagcccagcttcgacatctacag 132747 Score = 85.7 bits (43), Expect = 1e-13 Identities = 68/75 (90%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagctat-a 449 |||||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||| | Sbjct: 133834 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 133893 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 133894 aaggatattctgggc 133908
>dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I22, full insert sequence Length = 1331 Score = 97.6 bits (49), Expect = 3e-17 Identities = 140/169 (82%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| | Sbjct: 438 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccccg 497 Query: 357 acgtattctgcgaggaacccagccttgacatttacagagaagatattgtcttcaaagatc 416 || |||| | ||| |||||| | | || |||||||| ||||||||||||||||||| Sbjct: 498 ccgcgttctaccgggagcccagcttccatatctacagagatgatattgtcttcaaagatc 557 Query: 417 ctctcagtaaattcgtgggtattgatagcta-taaaggatattctgggc 464 || ||| ||| ||| ||||||||||| ||| |||||||||||||||| Sbjct: 558 ctatcaataatttcacgggtattgataactacaaaaggatattctgggc 606 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 267 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 326 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 327 tgcgggagaggcggctcccgccgccgctcttctcg 361
>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full insert sequence Length = 2143 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccctg 356 |||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 333 ggcggaggtactacctcaacatggggtacgccatccggacgctgagggaggagctccccg 392 Query: 357 acgtattctgcgaggaacccagccttgacatttacag 393 | || |||| | |||| |||||| | ||||| ||||| Sbjct: 393 atgtcttctccaaggagcccagcttcgacatctacag 429 Score = 85.7 bits (43), Expect = 1e-13 Identities = 68/75 (90%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagctat-a 449 |||||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||| | Sbjct: 1516 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 1575 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 1576 aaggatattctgggc 1590
>ref|XM_507081.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA Length = 447 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 152 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 211 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 212 tgcgggagaggcggctcccgccgccgctcttctcg 246 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccc 354 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| Sbjct: 323 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccc 380
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 69.9 bits (35), Expect = 7e-09 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagcta-ta 449 |||||| ||||||||||||||||||||| ||| ||| ||| ||||||||||| ||| | Sbjct: 37305 cagagatgatattgtcttcaaagatcctatcaataatttcacgggtattgataactacaa 37364 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 37365 aaggatattctgggc 37379 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 31818 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 31877 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 31878 tgcgggagaggcggctcccgccgccgctcttctcg 31912 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccc 354 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| Sbjct: 31989 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccc 32046
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 7e-09 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 391 cagagaagatattgtcttcaaagatcctctcagtaaattcgtgggtattgatagcta-ta 449 |||||| ||||||||||||||||||||| ||| ||| ||| ||||||||||| ||| | Sbjct: 7082456 cagagatgatattgtcttcaaagatcctatcaataatttcacgggtattgataactacaa 7082515 Query: 450 aaggatattctgggc 464 ||||||||||||||| Sbjct: 7082516 aaggatattctgggc 7082530 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 7076969 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 7077028 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 7077029 tgcgggagaggcggctcccgccgccgctcttctcg 7077063 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccc 354 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| Sbjct: 7077140 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccc 7077197 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gagaggaggctgccgccgcc 222 |||||||||||||||||||| Sbjct: 16326998 gagaggaggctgccgccgcc 16326979
>dbj|AK099688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A18, full insert sequence Length = 2647 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaatatagtgattagagtcttggaccctg 197 ||||||||||||||||||| || |||||||| ||||||||| | || | |||||| | Sbjct: 217 aggaggaggagaaggggacgagggggaaggagagaatagtgattcgggtgtcggacccgg 276 Query: 198 tgcgggagaggaggctgccgccgcctctgttctcg 232 ||||||||||| |||| |||||||| || |||||| Sbjct: 277 tgcgggagaggcggctcccgccgccgctcttctcg 311 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 297 ggcggaggtactacgtgaacatggggtacgccatccggacgctgcgggaggagctccc 354 ||||| ||||| |||| ||| | ||| ||||||||||| ||||||||||||||||||| Sbjct: 388 ggcggcggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccc 445
>ref|XM_466885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1844 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccgggaagaaggag 169 ||||||||||||||||| |||||||||||| Sbjct: 206 ggaggaggagaaggggaaggggaagaaggag 236
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds Length = 6281 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 ggaggaggagaaggggaccggga 161 ||||||||||||||||||||||| Sbjct: 6046 ggaggaggagaaggggaccggga 6024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 6074 aggaggagaaggggaccggg 6055
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 ggaggaggagaaggggaccggga 161 ||||||||||||||||||||||| Sbjct: 141812 ggaggaggagaaggggaccggga 141790 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccggga 161 ||||||||||||||||||||||| Sbjct: 102790 ggaggaggagaaggggaccggga 102812 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 141840 aggaggagaaggggaccggg 141821 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 102762 aggaggagaaggggaccggg 102781
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccgggaagaaggag 169 ||||||||||||||||| |||||||||||| Sbjct: 25250344 ggaggaggagaaggggaaggggaagaaggag 25250374
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccgggaagaaggag 169 ||||||||||||||||| |||||||||||| Sbjct: 17495 ggaggaggagaaggggaaggggaagaaggag 17525
>dbj|AK068667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L03, full insert sequence Length = 1844 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccgggaagaaggag 169 ||||||||||||||||| |||||||||||| Sbjct: 206 ggaggaggagaaggggaaggggaagaaggag 236
>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences Length = 15141 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 ggaggaggagaaggggaccggga 161 ||||||||||||||||||||||| Sbjct: 10236 ggaggaggagaaggggaccggga 10214 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 10264 aggaggagaaggggaccggg 10245
>ref|NM_130184.2| Arabidopsis thaliana unknown protein AT2G46220 mRNA, complete cds Length = 1123 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 510 ttgacatttacagggatgatattgttttcaaaga 543
>ref|XM_367112.1| Magnaporthe grisea 70-15 hypothetical protein (MG07037.4) partial mRNA Length = 1311 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gctcggcgcccgaccgcccgcg 74 |||||||||||||||||||||| Sbjct: 536 gctcggcgcccgaccgcccgcg 557
>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence Length = 182816 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggagaa 171 |||||||||||||||||| ||||||||| |||| Sbjct: 151324 aggaggaggagaaggggaaagggaagaagaagaa 151357
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggag 169 ||||||||||||| |||||| |||||||||||| Sbjct: 157495 gaaggaggaggaggaggggaaggggaagaaggag 157462
>gb|AY093803.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds Length = 726 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 326 ttgacatttacagggatgatattgttttcaaaga 359
>gb|AF361857.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds Length = 925 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 334 ttgacatttacagggatgatattgttttcaaaga 367
>gb|AF428419.1|AF428419 Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds Length = 1070 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 489 ttgacatttacagggatgatattgttttcaaaga 522
>gb|AY050447.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds Length = 1041 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 450 ttgacatttacagggatgatattgttttcaaaga 483
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 ggaagaggatggggaagaaagg 298 |||||||||||||||||||||| Sbjct: 2971411 ggaagaggatggggaagaaagg 2971390
>emb|BX820165.1|CNS0A8H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 381 ttgacatttacagagaagatattgtcttcaaaga 414 ||||||||||||| || |||||||| |||||||| Sbjct: 321 ttgacatttacagggatgatattgttttcaaaga 354
>gb|AF213480.1|AF213480 Iris tectorum acyl-ACP thioesterase (FatB2) mRNA, complete cds Length = 1832 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaagg 167 |||| |||||| |||||||||||||||||| Sbjct: 325 aggacgaggaggaggggaccgggaagaagg 296
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 ggaagaggatggggaagaaagg 298 |||||||||||||||||||||| Sbjct: 17466 ggaagaggatggggaagaaagg 17445
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 ggaagaggatggggaagaaagg 298 |||||||||||||||||||||| Sbjct: 141698 ggaagaggatggggaagaaagg 141677
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaaggagaa 171 |||||||||||||||||| ||||||||| |||| Sbjct: 141175 aggaggaggagaaggggaaagggaagaagaagaa 141142
>ref|XM_482543.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 102 ggagaggaggctgccgccgcc 82
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 96045 ggagaggaggctgccgccgcc 96065
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 29043246 ggagaggaggctgccgccgcc 29043226
>gb|AC104102.4| Mus musculus BAC clone RP24-377I13 from 15, complete sequence Length = 187284 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 gaagaggatggggaagaaagg 298 ||||||||||||||||||||| Sbjct: 18251 gaagaggatggggaagaaagg 18271
>gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, complete sequence Length = 270063 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 tgaaggaggaggagaagggga 155 ||||||||||||||||||||| Sbjct: 38431 tgaaggaggaggagaagggga 38411
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 aacctcgccggcgctcggcgc 61 ||||||||||||||||||||| Sbjct: 3835469 aacctcgccggcgctcggcgc 3835489
>emb|AL663108.4| Mouse DNA sequence from clone RP23-19H23 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene and a ribosomal protein L36 (Rpl36) pseudogene, complete sequence Length = 215362 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggaga 170 ||||||||||| |||||| ||||||||||||| Sbjct: 124638 aggaggaggaggaggggaaggggaagaaggaga 124670
>gb|AC018398.10| Homo sapiens chromosome 8, clone RP11-16G12, complete sequence Length = 191377 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ggaggagaaggggaccgggaa 162 ||||||||||||||||||||| Sbjct: 25421 ggaggagaaggggaccgggaa 25441
>gb|AC026397.4| Homo sapiens chromosome 16 clone CTA-162C2, complete sequence Length = 124998 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 tgtgaaggaggaggagaaggg 153 ||||||||||||||||||||| Sbjct: 9932 tgtgaaggaggaggagaaggg 9952
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 20989615 ggagaggaggctgccgccgcc 20989595
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 29134668 ggagaggaggctgccgccgcc 29134648
>gb|AC044802.6| Homo sapiens chromosome 16 clone RP11-61A14, complete sequence Length = 170691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 tgtgaaggaggaggagaaggg 153 ||||||||||||||||||||| Sbjct: 35801 tgtgaaggaggaggagaaggg 35821
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ggagaggaggctgccgccgcc 222 ||||||||||||||||||||| Sbjct: 55790 ggagaggaggctgccgccgcc 55770
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gcggagcgaccgcggcgggcg 99 ||||||||||||||||||||| Sbjct: 1714335 gcggagcgaccgcggcgggcg 1714355
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cgctcggcgcccgaccgcccg 72 ||||||||||||||||||||| Sbjct: 884231 cgctcggcgcccgaccgcccg 884251
>emb|AL929132.9| Mouse DNA sequence from clone RP23-346G8 on chromosome 2, complete sequence Length = 129438 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 ctgtgaaggaggaggagaaggggaccggg 160 ||||||||||||||||| || |||||||| Sbjct: 8719 ctgtgaaggaggaggaggagcggaccggg 8747
>dbj|AP004931.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093b, complete sequence Length = 41920 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 tgaaggaggaggagaagggga 155 ||||||||||||||||||||| Sbjct: 41716 tgaaggaggaggagaagggga 41696
>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete sequence Length = 166167 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 ccagagactacggcagagtccctgg 260 ||||||||||||||||||| ||||| Sbjct: 135413 ccagagactacggcagagtgcctgg 135389
>gb|AC004638.1|HUAC004638 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-116A10, complete sequence Length = 124645 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 tgtgaaggaggaggagaaggg 153 ||||||||||||||||||||| Sbjct: 9932 tgtgaaggaggaggagaaggg 9952
>gb|AC121821.3| Mus musculus chromosome 18 clone RP23-461O23, complete sequence Length = 175131 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 21998 gaaggaggaggagaagggga 22017
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 gtgaaggaggaggagaaggggacc 157 |||||||||| ||||||||||||| Sbjct: 784087 gtgaaggaggtggagaaggggacc 784110 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tgccgccgcctctgttctcg 232 |||||||||||||||||||| Sbjct: 749255 tgccgccgcctctgttctcg 749274
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 73147 gaaggaggaggagaagggga 73166
>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence Length = 190857 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 95225 gaaggaggaggagaagggga 95206
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaaggag 169 |||||||||||||||||| | |||||||||| Sbjct: 112006 aggaggaggagaaggggaaggagaagaaggag 111975
>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence Length = 210808 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 75040 gaaggaggaggagaagggga 75021
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gagaggaggctgccgccgcc 222 |||||||||||||||||||| Sbjct: 118351 gagaggaggctgccgccgcc 118332
>gb|BT016399.1| Zea mays clone Contig232 mRNA sequence Length = 637 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tgaaggaggaggagaagggg 154 |||||||||||||||||||| Sbjct: 102 tgaaggaggaggagaagggg 83
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cgtcctgcggagcgaccgcggcgg 96 ||||||||||||||||| |||||| Sbjct: 1786972 cgtcctgcggagcgaccccggcgg 1786995
>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence Length = 151577 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 gaggctgccgccgcctctgttctc 231 |||||||||||||||| ||||||| Sbjct: 148620 gaggctgccgccgcctttgttctc 148643
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence Length = 199464 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 52349 gaaggaggaggagaagggga 52330
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence Length = 175603 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 21735 gaaggaggaggagaagggga 21716
>ref|NM_033086.1| Homo sapiens FYVE, RhoGEF and PH domain containing 3 (FGD3), mRNA Length = 4952 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 2714 aggaggaggagaaggggacgggga 2691 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 2691 aggaggaggagaaggggacgggga 2668
>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence Length = 215165 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 3055 gaaggaggaggagaagggga 3036
>gb|AC140294.3| Mus musculus BAC clone RP23-359G16 from chromosome 19, complete sequence Length = 190551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 183354 gaaggaggaggagaagggga 183373
>gb|AC132256.3| Mus musculus BAC clone RP24-358I7 from chromosome 8, complete sequence Length = 163897 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggaccgggaagaaggag 169 |||||||||||||||||| |||||| ||||| Sbjct: 142191 aggaggaggagaaggggaaggggaaggaggag 142222
>gb|AC130549.4| Mus musculus BAC clone RP24-456I3 from chromosome 7, complete sequence Length = 160449 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 42848 gaaggaggaggagaagggga 42867
>gb|AC130711.3| Mus musculus BAC clone RP23-22M24 from chromosome 17, complete sequence Length = 226651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 182408 gaaggaggaggagaagggga 182389
>gb|AC121934.4| Mus musculus BAC clone RP24-207A18 from chromosome 5, complete sequence Length = 152037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 46363 gaaggaggaggagaagggga 46344
>gb|AC124487.3| Mus musculus BAC clone RP23-452B18 from chromosome 19, complete sequence Length = 195185 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 189372 gaaggaggaggagaagggga 189353
>gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosome 7, complete sequence Length = 160666 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 ggaagaggatggggaagaaaggcggagg 304 |||||||||||||||||| ||| ||||| Sbjct: 156133 ggaagaggatggggaagagaggaggagg 156106
>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence Length = 211411 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaaggag 169 |||||||||||||||||| |||||| ||||| Sbjct: 202652 aggaggaggagaaggggaaggggaaggaggag 202621
>gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, complete sequence Length = 176188 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 ggaagaggatggggaagaaaggcggagg 304 |||||||||||||||||| ||| ||||| Sbjct: 80859 ggaagaggatggggaagagaggaggagg 80832
>emb|CR721949.2|CNS0GK03 Tetraodon nigroviridis full-length cDNA Length = 910 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gctggctctgtgaaggagga 144 |||||||||||||||||||| Sbjct: 332 gctggctctgtgaaggagga 351
>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence Length = 203014 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 81443 gaaggaggaggagaagggga 81424
>gb|AC103930.10| Mus musculus chromosome 5, clone RP23-238D18, complete sequence Length = 203246 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||| |||||||||||| ||||||||| |||| Sbjct: 53428 gaaggagaaggagaaggggaaggggaagaagaagaa 53463
>gb|AC098592.5| Homo sapiens BAC clone RP11-403N12 from 7, complete sequence Length = 190672 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 146767 gaaggaggaggagaagggga 146748
>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence Length = 213637 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 49498 gaaggaggaggagaagggga 49479
>gb|AC133899.9| Mus musculus chromosome 15, clone RP24-511H11, complete sequence Length = 185808 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 174492 gaaggaggaggagaagggga 174511
>gb|AC146057.2| Pan troglodytes BAC clone RP43-90E18 from 7, complete sequence Length = 210447 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 60050 gaaggaggaggagaagggga 60069
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 87239 gaaggaggaggagaagggga 87220
>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence Length = 157411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaagaggatggggaagaaag 297 |||||||||||||||||||| Sbjct: 145989 gaagaggatggggaagaaag 146008
>gb|AC144799.3| Mus musculus chromosome 18 clone RP24-299J7, complete sequence Length = 192272 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 77581 gaaggaggaggagaagggga 77562
>emb|BX649553.6| Human DNA sequence from clone RP4-674K6 on chromosome X, complete sequence Length = 86882 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 54115 gaaggaggaggagaagggga 54096 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 54071 gaaggaggaggagaagggga 54052
>emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on chromosome 6 Contains a ribosomal protein L27a (60S ribosomal protein L27a) (RPL27A) pseudogene and a novel gene, complete sequence Length = 63621 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 26533 gaaggaggaggagaagggga 26514
>emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on chromosome 9 Contains the 3' end of the FGD3 gene for FGD1 family, member 3 (FLJ00004), a novel gene, a novel gene (MGC26847), a novel gene (MGC11115), the NINJ1 gene for ninjurin 1 and three CpG islands, complete sequence Length = 163689 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 52294 aggaggaggagaaggggacgggga 52271 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 52271 aggaggaggagaaggggacgggga 52248
>emb|AL359316.6| Human DNA sequence from clone RP3-359L13 on chromosome 6, complete sequence Length = 41722 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 11477 gaaggaggaggagaagggga 11496
>emb|AL158149.14| Human DNA sequence from clone RP11-208G24 on chromosome 9 Contains the GAS1 gene for growth arrest-specific 1, the 5' end of a novel gene and a CpG island, complete sequence Length = 102100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 21040 gaaggaggaggagaagggga 21021
>emb|AL157818.12| Human DNA sequence from clone RP11-464I2 on chromosome 13q32.1-32.3 Contains part of the ABCC4 gene for ATP-binding cassette, sub-family C (CFTR/MRP), member 4, complete sequence Length = 182485 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||||| || | |||||||||||| Sbjct: 109655 gaaggaggaggagaaggagaaggagaagaaggagaa 109690
>gb|AY152827.1| Felis catus clone BAC 186b21 major histocompatiblity complex extended class II region, partial sequence Length = 146453 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gggaccgggaagaaggagaa 171 |||||||||||||||||||| Sbjct: 71689 gggaccgggaagaaggagaa 71708
>gb|AY211386.1| Homo sapiens FGD3 mRNA, complete cds Length = 4952 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 2714 aggaggaggagaaggggacgggga 2691 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 2691 aggaggaggagaaggggacgggga 2668
>emb|Z86111.1|SKZ86111 Streptomyces lividans rpsP, trmD, rplS, sipW, sipX, sipY, sipZ, mutT genes and 4 open reading frames Length = 7860 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgggcggttcaaggtcac 111 |||||||||||||||||||| Sbjct: 5418 ggcgggcggttcaaggtcac 5437
>emb|Y09474.1|SLTK24SIP Streptomyces lividans sip gene Length = 1359 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgggcggttcaaggtcac 111 |||||||||||||||||||| Sbjct: 922 ggcgggcggttcaaggtcac 941
>gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, complete sequence Length = 163577 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 gctggctctgtgaaggaggaggag 148 |||||| ||||||||||||||||| Sbjct: 5262 gctggcgctgtgaaggaggaggag 5285
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 20919 gaaggaggaggagaagggga 20938
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcgggcggttcaaggtcac 111 |||||||||||||||||||| Sbjct: 121319 ggcgggcggttcaaggtcac 121338
>emb|AL031323.1|SPCC962 S.pombe chromosome III cosmid c962 Length = 16137 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ggaggaggagaaggggaccg 158 |||||||||||||||||||| Sbjct: 13554 ggaggaggagaaggggaccg 13573
>gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome 9, complete sequence Length = 223852 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||| ||||||||| || |||||||||||||| Sbjct: 154791 gaaggagaaggagaaggagaaggggaagaaggagaa 154826
>emb|AL627348.12| Mouse DNA sequence from clone RP23-421L2 on chromosome 11 Contains part of the gene for a novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1 and a CpG island, complete sequence Length = 146061 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaagg 167 ||||||||||||| |||||| |||||||||| Sbjct: 66443 gaaggaggaggaggaggggaaggggaagaagg 66474
>dbj|BS000645.2| Pan troglodytes chromosome Y clone: PTB-520M19, complete sequence Length = 166301 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 75363 gaaggaggaggagaagggga 75382
>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences Length = 198405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 70757 gaaggaggaggagaagggga 70738
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 19357032 gaaggaggaggagaagggga 19357013
>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154495 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 32789 gaaggaggaggagaagggga 32808
>gb|AC084881.19| Homo sapiens 12 BAC RP11-768F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194598 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaaggag 169 |||||||||||||||| | |||||||||||| Sbjct: 17805 aggaggaggagaagggaaaggggaagaaggag 17774
>gb|AC164572.4| Mus musculus 6 BAC RP24-89J17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221464 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 48498 gaaggaggaggagaagggga 48517
>gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211335 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaagg 167 ||||||||||||||| |||| |||||||||| Sbjct: 75128 gaaggaggaggagaaagggaaggggaagaagg 75159
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tgtgaaggaggaggagaagg 152 |||||||||||||||||||| Sbjct: 42821 tgtgaaggaggaggagaagg 42802
>gb|AC073866.16| Homo sapiens 12q BAC RP11-120B18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153756 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccgggaagaaggag 169 |||||||||||||||| | |||||||||||| Sbjct: 121034 aggaggaggagaagggaaaggggaagaaggag 121003
>ref|XM_682335.1| PREDICTED: Danio rerio similar to potassium voltage-gated channel, shaker-related subfamily, member 4 (LOC559036), mRNA Length = 2115 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 ggctctgtgaaggaggaggagaag 151 |||| ||||||||||||||||||| Sbjct: 835 ggctttgtgaaggaggaggagaag 858
>gb|AF368419.1|AF368419 Bos taurus toll-like receptor 2 mRNA, complete cds Length = 3513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 2753 gaaggaggaggagaagggga 2772
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||||| || | |||||||||||| Sbjct: 110855 gaaggaggaggagaaggagaaggagaagaaggagaa 110820
>ref|NM_174197.2| Bos taurus toll-like receptor 2 (TLR2), mRNA Length = 3513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 2753 gaaggaggaggagaagggga 2772
>gb|AC018499.3| Homo sapiens chromosome 3 clone RP11-267L16 map 3p, complete sequence Length = 198444 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ggaagaggatggggaagaaa 296 |||||||||||||||||||| Sbjct: 79313 ggaagaggatggggaagaaa 79332
>gb|AC147632.3| Mus musculus BAC clone RP23-326H18 from chromosome 5, complete sequence Length = 185519 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 38532 gaaggaggaggagaagggga 38551
>ref|NM_001022863.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC962.06c), partial mRNA Length = 1764 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ggaggaggagaaggggaccg 158 |||||||||||||||||||| Sbjct: 407 ggaggaggagaaggggaccg 388
>gb|AC007491.7| Homo sapiens chromosome 16 clone RP11-182C10, complete sequence Length = 180888 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaagg 167 ||||||||||||||| |||| |||||||||| Sbjct: 72018 gaaggaggaggagaaagggaaggggaagaagg 72049
>dbj|AB037202.2| Mus musculus mlst-1 gene for liver specific transporter-1, complete cds Length = 16257 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 9244 gaaggaggaggagaagggga 9263
>gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, complete sequence Length = 198960 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||||| || | |||||||||||| Sbjct: 130569 gaaggaggaggagaaggagaaggagaagaaggagaa 130534
>gb|AC008070.4| Homo sapiens BAC clone RP11-368J13 from 2, complete sequence Length = 154864 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaaggggaccgggaagaagg 167 |||||||||||||||||||| Sbjct: 113171 gaaggggaccgggaagaagg 113152
>gb|AC016961.28| Homo sapiens 3 BAC RP11-394J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98945 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||||| || | |||||||||||| Sbjct: 47635 gaaggaggaggagaaggagaaggagaagaaggagaa 47670
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agaggaggctgccgccgcct 223 |||||||||||||||||||| Sbjct: 132191 agaggaggctgccgccgcct 132172
>gb|AY634629.1| Bos taurus Toll-like receptor 2 mRNA, complete cds Length = 3613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 2693 gaaggaggaggagaagggga 2712
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agaggaggctgccgccgcct 223 |||||||||||||||||||| Sbjct: 51639 agaggaggctgccgccgcct 51620
>dbj|AK000004.1| Homo sapiens mRNA for FLJ00004 protein, partial cds Length = 4670 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aggaggaggagaaggggaccggga 161 ||||||||||||||||||| |||| Sbjct: 2432 aggaggaggagaaggggacgggga 2409
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 5057 aggaggagaaggggaccggg 5038 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ggaggagaaggggaccggga 161 |||||||||||||||||||| Sbjct: 5029 ggaggagaaggggaccggga 5010
>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence Length = 167125 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaagaggatggggaagaaag 297 |||||||||||||||||||| Sbjct: 131713 gaagaggatggggaagaaag 131694
>gb|AC004993.1|AC004993 Homo sapiens PAC clone RP5-1194E14 from 7p21, complete sequence Length = 161453 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 21859 gaaggaggaggagaagggga 21878
>emb|CT030129.9| Zebrafish DNA sequence from clone CH73-314G15 in linkage group 7, complete sequence Length = 102729 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ggctctgtgaaggaggaggagaag 151 |||| ||||||||||||||||||| Sbjct: 50297 ggctttgtgaaggaggaggagaag 50274
>gb|AF073779.1|AF073779 Schizosaccharomyces pombe putative splicing factor BBP/SF1 (bbp/sf1) mRNA, complete cds Length = 1764 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ggaggaggagaaggggaccg 158 |||||||||||||||||||| Sbjct: 407 ggaggaggagaaggggaccg 388
>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence Length = 170303 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 gaggctgccgccgcctctgttctc 231 |||||||||||||||| ||||||| Sbjct: 149927 gaggctgccgccgcctttgttctc 149904
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 198223 gaaggaggaggagaagggga 198242
>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence Length = 262262 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 128910 gaaggaggaggagaagggga 128891
>gb|AC121960.3| Mus musculus BAC clone RP24-248C17 from 14, complete sequence Length = 160030 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 80717 gaaggaggaggagaagggga 80736
>gb|AC003664.1|AC003664 Homo sapiens chromosome 17, clone hCIT54K19, complete sequence Length = 202233 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||| ||||||||| || |||||||||||||| Sbjct: 75660 gaaggagaaggagaaggagaaggggaagaaggagaa 75625 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||| ||||||||| || |||||||||||||| Sbjct: 75633 gaaggagaaggagaaggagaaggggaagaaggagaa 75598
>gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, complete sequence Length = 229555 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 153716 gaaggaggaggagaagggga 153735
>gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, complete sequence Length = 189215 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||||| || | |||||||||||| Sbjct: 51630 gaaggaggaggagaaggagaaggagaagaaggagaa 51595
>gb|AC155326.8| Mus musculus 6 BAC RP24-72P18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184159 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 80872 gaaggaggaggagaagggga 80853
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence Length = 193235 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 135769 gaaggaggaggagaagggga 135788
>emb|AL732514.10| Mouse DNA sequence from clone RP23-219G21 on chromosome 4, complete sequence Length = 220219 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 136 gaaggaggaggagaaggggaccgggaagaaggagaa 171 ||||||||||||||| | || || |||||||||||| Sbjct: 8144 gaaggaggaggagaatgagaacgagaagaaggagaa 8109
>gb|M81222.1|SH1SEQ Herpesvirus-pseudorabies virus mRNA sequence Length = 4968 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggaggagaaggggaccggga 161 |||||||||||||||||||| Sbjct: 4849 ggaggagaaggggaccggga 4868 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 4821 aggaggagaaggggaccggg 4840
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggaggagaaggggaccggga 161 |||||||||||||||||||| Sbjct: 2035 ggaggagaaggggaccggga 2054 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 2007 aggaggagaaggggaccggg 2026
>gb|M25527.1|SH1EGB Pseudorabiesvirus immediate-early gene DNA sequence Length = 217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 148 aggaggagaaggggaccggg 129 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ggaggagaaggggaccggga 161 |||||||||||||||||||| Sbjct: 120 ggaggagaaggggaccggga 101
>gb|AC018502.6| Homo sapiens chromosome 3 clone RP11-327H17 map 3p, complete sequence Length = 198459 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ggaagaggatggggaagaaa 296 |||||||||||||||||||| Sbjct: 79322 ggaagaggatggggaagaaa 79341
>gb|L24958.1|SH1ULTRJ Pseudorabies virus long terminal repeat junction Length = 2080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggaggagaaggggaccggga 161 |||||||||||||||||||| Sbjct: 1961 ggaggagaaggggaccggga 1980 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggaggagaaggggaccggg 160 |||||||||||||||||||| Sbjct: 1933 aggaggagaaggggaccggg 1952
>emb|AL672056.4| Mouse DNA sequence from clone RP23-467O2 on chromosome X, complete sequence Length = 150695 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 140024 gaaggaggaggagaagggga 140005
>emb|AL645794.12| Mouse DNA sequence from clone RP23-129E1 on chromosome 2, complete sequence Length = 75020 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aggaggaggagaaggggacc 157 |||||||||||||||||||| Sbjct: 17334 aggaggaggagaaggggacc 17353
>emb|AL596383.8| Mouse DNA sequence from clone RP23-344E9 on chromosome 11, complete sequence Length = 110676 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaaggaggaggagaagggga 155 |||||||||||||||||||| Sbjct: 29760 gaaggaggaggagaagggga 29741 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,000,374 Number of Sequences: 3902068 Number of extensions: 5000374 Number of successful extensions: 131455 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130176 Number of HSP's gapped (non-prelim): 1267 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
