>NUD18_ARATH (Q9LQU5) Nudix hydrolase 18, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT18)
          Length = 176

 Score =  102 bits (254), Expect = 5e-22
 Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = +2

Query: 98  MAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX---ISSQKGHGMMFP 268
           M  LV+R GR+ QRY+   G R VVGCIPY                  ISSQKGH +MFP
Sbjct: 1   MVCLVSRTGRQSQRYNK--GRRQVVGCIPYRLKISSDGTISDEFEVLVISSQKGHALMFP 58

Query: 269 KGGWELDESMDDXXXXXXXXXXGVSGDMGKVLGCWHYQSRRYQTTYEGIMYPLRVTHELQ 448
           KGGWELDES+++          GV G++ + LG W + S+   T YEG M+P+ V  EL+
Sbjct: 59  KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 118

Query: 449 QW 454
            W
Sbjct: 119 LW 120

>NUD17_ARATH (Q9ZU95) Nudix hydrolase 17, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT17)
          Length = 182

 Score =  102 bits (253), Expect = 6e-22
 Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
 Frame = +2

Query: 89  IPRMAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX---ISSQKGHGM 259
           + +M  L +R GR+ QRY+   G R VVGC+PY                  ISSQKGH +
Sbjct: 3   VEKMVCLASRTGRQFQRYNK--GRRQVVGCVPYRFKLSNDGKISDEVEVLVISSQKGHAL 60

Query: 260 MFPKGGWELDESMDDXXXXXXXXXXGVSGDMGKVLGCWHYQSRRYQTTYEGIMYPLRVTH 439
           MFPKGGWELDES+++          GV G++   LG W + S+   T YEG+M+P+ VT 
Sbjct: 61  MFPKGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTE 120

Query: 440 ELQQW 454
           +L+ W
Sbjct: 121 QLELW 125

>NUDT4_ARATH (Q9LE73) Nudix hydrolase 4 (EC 3.6.1.-) (AtNUDT4) (ADP-ribose|
           pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase)
           (EC 3.6.1.22)
          Length = 207

 Score =  101 bits (251), Expect = 1e-21
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
 Frame = +2

Query: 86  KIPRMAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX----ISSQKGH 253
           +I ++  LV+R GR+LQRY  + G R VVGC+PY                   +S+QKG 
Sbjct: 36  QIEKVVSLVSRTGRDLQRYDHA-GYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGK 94

Query: 254 GMMFPKGGWELDESMDDXXXXXXXXXXGVSGDMGKVLGCWHYQSRRYQTTYEGIMYPLRV 433
           GM+FPKGGWE DESM++          GV+G++ + LG W Y+S+R+   ++G M+ L V
Sbjct: 95  GMLFPKGGWETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLV 154

Query: 434 THELQQW 454
           + E ++W
Sbjct: 155 SQEFERW 161

>NUD21_ARATH (Q8VY81) Nudix hydrolase 21, chloroplast precursor (EC 3.6.1.-)|
           (AtNUDT21)
          Length = 198

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 45/120 (37%), Positives = 71/120 (59%)
 Frame = +2

Query: 95  RMAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXXISSQKGHGMMFPKG 274
           ++  LV+R GR+LQRY+ + G R VVGC+PY                + +KG GM+ PKG
Sbjct: 40  KVVSLVSRTGRDLQRYNTA-GYRQVVGCVPYRYKKHGGGEIEVLLISAQKKGKGMLLPKG 98

Query: 275 GWELDESMDDXXXXXXXXXXGVSGDMGKVLGCWHYQSRRYQTTYEGIMYPLRVTHELQQW 454
           GWE+DES+++          GV+G + + LG W Y+S+R+   ++G M+PL V+ + + W
Sbjct: 99  GWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIW 158

>NUD16_ARATH (Q9LHK1) Nudix hydrolase 16, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT16)
          Length = 180

 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 47/131 (35%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
 Frame = +2

Query: 98  MAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX------ISSQKGHGM 259
           M  LVAR GR  QRY    G R+V GCIP+                     ISS  G G+
Sbjct: 1   MCDLVARTGRLQQRYE--DGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGL 58

Query: 260 MFPKGGWELDESMDDXXXXXXXXXXGVSGDMGKVLGCWHYQSRRYQTTY--EGI----MY 421
           +FPKGGWE DE++ +          GV G +   LG + ++S+ +Q  +  EG+    MY
Sbjct: 59  LFPKGGWENDETVREAAAREAVEEAGVRGILMDFLGNYEFKSKSHQDEFSPEGLCKAAMY 118

Query: 422 PLRVTHELQQW 454
            L V  EL  W
Sbjct: 119 ALYVKEELATW 129

>NUD12_ARATH (Q93ZY7) Nudix hydrolase 12, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT12)
          Length = 203

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
 Frame = +2

Query: 98  MAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX---------ISSQKG 250
           M+VL +R GR+ QRY  +   R+V GCIPY                        +SS   
Sbjct: 1   MSVLSSRTGRDRQRYDNNF--RLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNR 58

Query: 251 HGMMFPKGGWELDESMDDXXXXXXXXXXGVSGDMGKV-LGCWHYQSRRYQTTYE------ 409
           H ++FPKGGWE DE++ +          GV G + ++ LG W ++S+      E      
Sbjct: 59  HDLVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCK 118

Query: 410 GIMYPLRVTHELQQW 454
           G M+ L+VT EL+ W
Sbjct: 119 GYMFALKVTEELEDW 133

>NUD13_ARATH (Q52K88) Nudix hydrolase 13, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT13)
          Length = 202

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
 Frame = +2

Query: 98  MAVLVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXX--------ISSQKGH 253
           M+ L AR GR+ QRY  +   R+V GCIPY                       ISS   H
Sbjct: 1   MSNLSARTGRDHQRYDNNF--RLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRH 58

Query: 254 GMMFPKGGWELDESMDDXXXXXXXXXXGVSGDMGK-VLGCWHYQSRRYQTTYE------- 409
            ++FPKGGWE DE++ +          GV G + +  LG W ++S+      +       
Sbjct: 59  DLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGC 118

Query: 410 -GIMYPLRVTHELQQW 454
            G M+ L V  EL  W
Sbjct: 119 KGYMFALEVKEELAIW 134

>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC|
           3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate
           hydrolase) (EC 3.6.1.-) (Ap6A hydrolase)
          Length = 210

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107 LVARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXXISSQKGH-GMMFPKGGWE 283
           + +R+GR   R++  TG R+  G +                 +SS K H   + PKGGWE
Sbjct: 24  MTSREGRTKNRFNPITGARLAAGVV------ALSADKRKVLLVSSAKKHPSWVVPKGGWE 77

Query: 284 LDESMDDXXXXXXXXXXGVSGDMGKVLG 367
            DES+            G+ G + + LG
Sbjct: 78  ADESVQQAALREGWEEGGLVGHITRSLG 105

>DDP1_YEAST (Q99321) Diphosphoinositol polyphosphate phosphohydrolase DDP1 (EC|
           3.6.1.52) (Diadenosine and diphosphoinositol
           polyphosphate phosphohydrolase 1) (EC 3.6.1.-)
           (Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase)
           (AP6A hydrolase)
          Length = 187

 Score = 35.4 bits (80), Expect = 0.069
 Identities = 24/60 (40%), Positives = 27/60 (45%)
 Frame = +2

Query: 113 ARQGRELQRYSASTGGRIVVGCIPYXXXXXXXXXXXXXXXISSQKGHGMMFPKGGWELDE 292
           AR+GRE Q YS  TG R+V GCI                  SS      + PKGG E DE
Sbjct: 15  AREGRENQVYSPVTGARLVAGCI-----CLTPDKKQVLMITSSAHKKRWIVPKGGVEKDE 69

>DFNA5_HORSE (Q7YS54) Nonsyndromic hearing impairment protein 5 homolog|
          Length = 497

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = -2

Query: 328 LEGLAPGRVVHGLVQLPPALGEHHAVPLLRADH---QHLQLA-LAFPLAHPVRDAPHHDA 161
           LE  AP  + + +++L   L       LLR  H   +H + + + FP A  ++D P  D 
Sbjct: 209 LEIPAPTTIAYSVIELYVKLDGQFEFCLLRGKHGGFEHQRRSDIVFPDAGALQDFPFWDV 268

Query: 160 PAGARAVPLQLAPLPRHKNG 101
           P   + +P    PL   K G
Sbjct: 269 PDAGQGLPTPDGPLSVLKQG 288

>GSHAB_STRMU (Q8DW15) Glutathione biosynthesis bifunctional protein gshAB|
           (Gamma-GCS-GS) (GCS-GS) [Includes: Glutamate--cysteine
           ligase (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase)
           (Gamma-ECS) (GCS); Glutathione synthetase (EC 6.3.2.3)
           (Glutathione sy
          Length = 754

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -2

Query: 325 EGLAPGRVVHGLVQLP--PALGEHHAVPLLRADHQHLQLALAFPLAHPVRD 179
           E L   +  H L Q P   ALG     P ++ D+   Q+ L  P+AH  ++
Sbjct: 26  ESLRINKTNHRLAQTPHPTALGSRQFHPYIQTDYSESQMELITPVAHSSKE 76

>ATF6B_MOUSE (O35451) Cyclic AMP-dependent transcription factor ATF-6 beta|
           (Activating transcription factor 6 beta) (ATF6-beta)
           (cAMP-responsive element-binding protein-like 1) (cAMP
           response element-binding protein-related protein)
           (Creb-rp)
          Length = 699

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 22/75 (29%), Positives = 29/75 (38%)
 Frame = -2

Query: 319 LAPGRVVHGLVQLPPALGEHHAVPLLRADHQHLQLALAFPLAHPVRDAPHHDAPAGARAV 140
           L P  VV   V +PP  G   A  LL+   Q   ++    +   +R  P   APA  R  
Sbjct: 241 LQPKPVVLTTVPVPPRAGPTSAAVLLQPLVQQPAVSPVVLIQGAIRVQPEGPAPAAPRPE 300

Query: 139 PLQLAPLPRHKNGHP 95
              + P P   N  P
Sbjct: 301 RKSIVPAPMPGNSCP 315


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,837,395
Number of Sequences: 219361
Number of extensions: 851572
Number of successful extensions: 2338
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)