ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62c06 |
|---|---|
| Clone Library Name | barley_pub |
>EXOS8_MOUSE (Q9D753) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 43) (Exosome component 8) Length = 276 Score = 95.5 bits (236), Expect = 5e-20 Identities = 44/100 (44%), Positives = 64/100 (64%) Frame = +3 Query: 147 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 326 ++ + PL + R L+E+ RPD R L E R TTV +G++S+A GSALV+LG+T ++ +K Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64 Query: 327 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPV 446 E +PP + PD+G V +PP+CS R G P E A V Sbjct: 65 EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQV 104
>EXOS8_HUMAN (Q96B26) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 43) (Exosome component 8) (p9) (Opa-interacting protein 2) Length = 276 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/100 (43%), Positives = 63/100 (63%) Frame = +3 Query: 147 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 326 ++ + PL + R L+E+ RPD R L E R TTV +G++S+A GSALV+LG+T ++ +K Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64 Query: 327 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPV 446 E +P + PD+G V +PP+CS R G P E A V Sbjct: 65 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQV 104
>ECX2_METKA (Q8TYC2) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 267 Score = 73.9 bits (180), Expect = 2e-13 Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 5/97 (5%) Frame = +3 Query: 165 LAFLERH-----LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLE 329 LA ++RH +R R D R E RP V G +S A+GSALVRLG+T ++ +KLE Sbjct: 6 LARIKRHEVLAAIRAGERIDGRDFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLE 65 Query: 330 VMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAA 440 V P ++P++G++AV + P+ P PG P E A Sbjct: 66 VGRPYPDSPNEGALAVNAELVPLADPSFEPGPPDENA 102
>RRP43_SCHPO (Q10205) Putative exosome complex exonuclease RRP43 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 43) Length = 270 Score = 70.5 bits (171), Expect = 2e-12 Identities = 30/101 (29%), Positives = 57/101 (56%) Frame = +3 Query: 147 YRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 326 ++++ P +L L + VR D R ++E R + +S+A+GSA++R G+ + IK Sbjct: 17 FKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKA 76 Query: 327 EVMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAPVI 449 E+ P +P++G + + P+CS +PG P++ A V+ Sbjct: 77 EIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVV 117
>ECX2_SULTO (Q975G9) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 275 Score = 68.9 bits (167), Expect = 5e-12 Identities = 35/85 (41%), Positives = 49/85 (57%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 L +R D R+ ++ RP +V L A GSALV+LGDT +LA +KLE P +TP+QG Sbjct: 23 LERGIRLDGRKNSDYRPISVTLNYAKKAEGSALVKLGDTMVLAGVKLEEEEPFPDTPNQG 82 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 ++ V + P+ PG P E A Sbjct: 83 NLVVNVELLPLAYETFEPGPPDENA 107
>ECX2_SULSO (Q9UXC0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 275 Score = 67.0 bits (162), Expect = 2e-11 Identities = 33/83 (39%), Positives = 48/83 (57%) Frame = +3 Query: 192 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSV 371 + +R D R+L + RP ++ L A GSALV+LG T +LA KLE+ P +TP+QG++ Sbjct: 25 KGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNL 84 Query: 372 AVEFHMPPICSPLVRPGRPAEAA 440 V + P+ PG P E A Sbjct: 85 IVNVELLPLAYETFEPGPPDENA 107
>ECX2_AERPE (Q9YC05) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 276 Score = 64.7 bits (156), Expect = 1e-10 Identities = 34/85 (40%), Positives = 47/85 (55%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 LR+ RP R L R + G + A GSALV+LG T ++A +K V +P +TP+QG Sbjct: 23 LRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQG 82 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 + V P+ SP+ PG P E A Sbjct: 83 VLTVHAEFVPLASPVFEPGPPDENA 107
>ECX2_PYRKO (Q5JIR7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 272 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/85 (38%), Positives = 44/85 (51%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 LRE R D R + R + + + A GSA VRLGDT +L IK E+ P + PD+G Sbjct: 19 LREGKRIDGRSFEDYRDLEIKVNVIEKAEGSAWVRLGDTQVLVGIKAELGEPFPDLPDRG 78 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 + + P+ SP PG P E A Sbjct: 79 VITTNVELVPLASPTFEPGPPDENA 103
>ECX2_PYRFU (Q8U0M0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 277 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/85 (38%), Positives = 46/85 (54%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 L+E R D R + RP V +G + A GSALV+LG+T +L IK + P +TP+ G Sbjct: 19 LKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPFPDTPNMG 78 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 + + P+ SP PG P E A Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERA 103
>ECX2_PYRAB (Q9V118) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 64.3 bits (155), Expect = 1e-10 Identities = 32/85 (37%), Positives = 45/85 (52%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 L+E R D R + RP + +G + A GSALV+LG T +L IK + P +TP+ G Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGIKTSLGEPFPDTPNMG 78 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 + + P+ SP PG P E A Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERA 103
>ECX2_ARCFU (O29756) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 259 Score = 64.3 bits (155), Expect = 1e-10 Identities = 31/83 (37%), Positives = 46/83 (55%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 LR++ R D R E R + + A GSALV+LGDT ++ +K++ P +TPD+G Sbjct: 18 LRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPYPDTPDRG 77 Query: 366 SVAVEFHMPPICSPLVRPGRPAE 434 + V + P+ SP PG P E Sbjct: 78 VIIVNAELVPLASPTFEPGPPDE 100
>ECX2_PYRHO (O59224) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 63.5 bits (153), Expect = 2e-10 Identities = 32/85 (37%), Positives = 45/85 (52%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQG 365 L+E R D R + RP + +G + A GSALV+LG T +L IK + P +TP+ G Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGIIEKAEGSALVKLGSTQVLVGIKTTLGEPFPDTPNMG 78 Query: 366 SVAVEFHMPPICSPLVRPGRPAEAA 440 + + P+ SP PG P E A Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERA 103
>ECX2_METTH (O26778) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 271 Score = 57.8 bits (138), Expect = 1e-08 Identities = 27/78 (34%), Positives = 43/78 (55%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R L E R ++ G +S A GS+ V+LG+T ++ +K ++ P +TP+ G + Sbjct: 25 RIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDTPEMGVILTN 84 Query: 381 FHMPPICSPLVRPGRPAE 434 + P+ SP PG P E Sbjct: 85 SELLPMASPTFEPGPPDE 102
>ECX2_METMA (Q8PTT7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 266 Score = 55.1 bits (131), Expect = 8e-08 Identities = 28/80 (35%), Positives = 41/80 (51%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R + R + +S A GSA V LG+T +L +KL+ +P ++ D+G + Sbjct: 25 RQDGRGFKDFRELKLETNVISKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84 Query: 381 FHMPPICSPLVRPGRPAEAA 440 + PI SP PG P E A Sbjct: 85 LELNPIASPEFEPGPPREDA 104
>ECX2_METAC (Q8TGX5) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 266 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R + R + + A GSA V LG+T +L +KL+ +P ++ D+G + Sbjct: 25 RQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84 Query: 381 FHMPPICSPLVRPGRPAEAA 440 + PI SP PG P E A Sbjct: 85 LELNPIASPEFEPGPPREEA 104
>ECX2_THEAC (Q9HIP1) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 260 Score = 52.8 bits (125), Expect = 4e-07 Identities = 29/80 (36%), Positives = 41/80 (51%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R E R T+ + A+GSA V LG+T ++A +K+E P +TPDQG + Sbjct: 26 RIDGRLPDEFRELTIIENYIPRANGSAYVALGNTRVVAGVKIEAGEPFPDTPDQGVLTTN 85 Query: 381 FHMPPICSPLVRPGRPAEAA 440 + PI P G P + A Sbjct: 86 VELLPIAFPSFEAGPPNDLA 105
>ECX2_PYRAE (Q8ZVN0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 274 Score = 52.8 bits (125), Expect = 4e-07 Identities = 30/89 (33%), Positives = 45/89 (50%) Frame = +3 Query: 174 LERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET 353 + R L R D R + R + +G V +A GSA V+LG T ++A +K+ + P + Sbjct: 20 IRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDA 79 Query: 354 PDQGSVAVEFHMPPICSPLVRPGRPAEAA 440 PD+G + V + P SP G P E A Sbjct: 80 PDEGVLVVNAEVLPHASPYTEVGPPDEFA 108
>ECX2_THEVO (Q97BZ4) Probable exosome complex exonuclease 2 (EC 3.1.13.-)| Length = 260 Score = 52.4 bits (124), Expect = 5e-07 Identities = 30/80 (37%), Positives = 40/80 (50%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R E R T+ V A+GSA V LG T ++A +K+E P +TPDQG + Sbjct: 26 RIDGRLPDEFREITIIENYVPRANGSAYVALGKTRVVAGVKIEAGEPFPDTPDQGVLTTN 85 Query: 381 FHMPPICSPLVRPGRPAEAA 440 + PI P G P + A Sbjct: 86 VELLPIAFPSFEAGPPNDLA 105
>ECX1_SULAC (Q4JB27) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 243 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 359 L +R D R+L E RP + LG + +A GSA+ +G+T ++A++ E+ PD Sbjct: 11 LENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPD 70 Query: 360 QGSVAVEFHMPP 395 + S+ V +HM P Sbjct: 71 KASLRVRYHMTP 82
>ECX1_PYRAE (Q8ZVM9) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 359 L+ VR D R + R +A+G VS+A GSA+V G T +A++ E+ PD Sbjct: 9 LQNGVRADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPD 68 Query: 360 QGSVAVEFHMPP 395 +G + V +HM P Sbjct: 69 RGVMRVRYHMAP 80
>RNPH_BRAJA (Q89WK4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 45.1 bits (105), Expect = 8e-05 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R E RP T+ G V A GS LV+ GDT +L + LE PP + +G V Sbjct: 1 MRPSRRAPDELRPVTLERGVVKYAEGSCLVKFGDTHVLVTATLEDRLPPWLKGQGRGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>ECX1_SULTO (Q975G8) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 247 Score = 43.5 bits (101), Expect = 2e-04 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 359 L +R D R+ E RP + LG + +A GSA+ +G+T ++A++ E+ PD Sbjct: 15 LDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPD 74 Query: 360 QGSVAVEFHMPP 395 + + V +HM P Sbjct: 75 RAVLRVRYHMTP 86
>EXOS7_HUMAN (Q15024) Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 42) (Exosome component 7) (p8) Length = 291 Score = 43.1 bits (100), Expect = 3e-04 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +3 Query: 171 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 350 ++ ++E +R D R + R V VS+ GSA V+LG T +L +K E+ +P E Sbjct: 13 YIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLE 72 Query: 351 TPDQG 365 P++G Sbjct: 73 KPNEG 77
>EXOS9_MOUSE (Q9JHI7) Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome| component 9) (Polymyositis/scleroderma autoantigen 1) (Autoantigen PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa) (PM/Scl-75) (P75 polymyositis-scleroderma overlap syn Length = 438 Score = 42.7 bits (99), Expect = 4e-04 Identities = 23/88 (26%), Positives = 42/88 (47%) Frame = +3 Query: 171 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 350 FL R + E R D R+ + R ++ G + +G +V LG T +L + E++SP Sbjct: 13 FLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKLN 69 Query: 351 TPDQGSVAVEFHMPPICSPLVRPGRPAE 434 +G + + + +P PGR ++ Sbjct: 70 RATEGILFFNLELSQMAAPAFEPGRQSD 97
>EXOS7_MOUSE (Q9D0M0) Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 42) (Exosome component 7) Length = 291 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +3 Query: 171 FLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAE 350 ++ ++E +R D R R V VS+ GSA V+LG T +L +K E+ +P E Sbjct: 13 YIVHGVQEDLRVDGRGCEVYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLE 72 Query: 351 TPDQG 365 P++G Sbjct: 73 KPNEG 77
>RNPH_RHOPA (Q6NCY8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 41.6 bits (96), Expect = 0.001 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R E R ++ G V A GS LV+ GDT +L + LE PP + +G V Sbjct: 1 MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVT 60 Query: 375 VEFHMPPICSPLVRPGRPAEA 437 E+ M P + L R R A A Sbjct: 61 AEYGMLPRAT-LERTRREASA 80
>ECX1_AERPE (Q9YC03) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 359 +R+ R D R + RP + +G + +A GSALV G T +LA++ E PD Sbjct: 12 IRDGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQRFYVLPD 71 Query: 360 QGSVAVEFHMPP 395 + ++ V +HM P Sbjct: 72 RAALRVRYHMAP 83
>ECX1_SULSO (Q9UXC2) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 248 Score = 40.4 bits (93), Expect = 0.002 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI--KLEVMSPPAETPD 359 L + R D R+ E R + LG + +A GSA+ +G+T +A++ E+ PD Sbjct: 14 LDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPD 73 Query: 360 QGSVAVEFHMPP 395 + + V +HM P Sbjct: 74 RAVLRVRYHMTP 85
>RNPH_PHOPR (Q6LVN8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 39.7 bits (91), Expect = 0.003 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R ++ RP T+ + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPSGRSTSQVRPITITRNFTAHAEGSVLVEFGDTKVICTASVEENVPRWLKGKGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BORPA (Q7W6C1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 250 Score = 39.7 bits (91), Expect = 0.003 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +3 Query: 189 RESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQG 365 R SVRP R + RP ++ G A GS LVR G+T +L + LE + P + +G Sbjct: 11 RPSVRPAGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEG 70 Query: 366 SVAVEFHMPP 395 V E+ M P Sbjct: 71 WVTAEYGMLP 80
>RNPH_RICCN (Q92GZ7) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R R+ + RP ++ L + +A GS L+++G+T ++ S E PP +QG + Sbjct: 1 MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RICPR (Q9ZCT5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R R+ + RP ++ L + +A GS L+++G+T ++ S E PP +QG + Sbjct: 1 MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMIP 67
>RNPH_AGRT5 (Q8UIG8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 38.1 bits (87), Expect = 0.010 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R+ + R + A GS LV+ GDT +L + LE +PP +G V Sbjct: 1 MRPSGRKTDQMRKVSFERNFSKHAEGSCLVKFGDTHVLVTASLEEKTPPWLRNSGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_CLOPE (Q8XI67) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R R+ + RP + A GS L+ +GDT +L + +E PP + +G + Sbjct: 1 MRSSGRKKEQIRPVKITRNFTKYAEGSVLIEVGDTKVLCTASIEEKVPPFLKGSGEGWIT 60 Query: 375 VEFHMPP 395 E++M P Sbjct: 61 AEYNMLP 67
>RNPH_PHOLL (Q7MAX2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 37.7 bits (86), Expect = 0.013 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPTGRAAEQVRPITITRHYTKHAEGSVLVEFGDTKVLCNASVEEGVPRFLKGQGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_SALTY (P0A2C3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.4 bits (85), Expect = 0.017 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_SALTI (P0A2C4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.4 bits (85), Expect = 0.017 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RHILO (Q98DN6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.023 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R+ E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRQFDEMRAISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNSGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>EXOS9_HUMAN (Q06265) Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome| component 9) (Polymyositis/scleroderma autoantigen 1) (Autoantigen PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa) (PM/Scl-75) (P75 polymyositis-scleroderma overlap syn Length = 423 Score = 37.0 bits (84), Expect = 0.023 Identities = 19/78 (24%), Positives = 37/78 (47%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVE 380 R D R+ + R ++ G + +G +V LG T +L + E++SP +G + Sbjct: 7 RLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKLNRATEGILFFN 63 Query: 381 FHMPPICSPLVRPGRPAE 434 + + +P PGR ++ Sbjct: 64 LELSQMAAPAFEPGRQSD 81
>RNPH_BACHD (Q9K8D8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 257 Score = 37.0 bits (84), Expect = 0.023 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R+ E RP ++ + + GS L+ +G+T ++ + LE PP +G + Sbjct: 1 MRMDERKADELRPISIEINYLHHPEGSVLISIGNTKVICTASLEDRVPPFLRGQGKGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYSMLP 67
>RNPH_IDILO (Q5QYL5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 37.0 bits (84), Expect = 0.023 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPSGRTAQQIRPVTITRNFTKHAEGSVLIEFGETKVLCNASVERGVPRFLKGKGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYSMLP 67
>RNPH_SHIFL (Q83PN2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 36.6 bits (83), Expect = 0.030 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ECOLI (P03842) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 36.6 bits (83), Expect = 0.030 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ECOL6 (P66679) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 36.6 bits (83), Expect = 0.030 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ECO57 (P66680) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 36.6 bits (83), Expect = 0.030 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BACSU (P28619) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 36.2 bits (82), Expect = 0.039 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R+ E RP T L +S GS L+ G+T ++ + +E PP +G + Sbjct: 1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYSMLP 67
>RNPH_THETN (Q8RC30) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 261 Score = 36.2 bits (82), Expect = 0.039 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET-PDQGSVAV 377 R D R E RP + A GS L+ +G+T ++ + +E PP + +G + Sbjct: 3 RIDGREFNELRPIKITRNFNKFAEGSVLIEMGETKVICTASIEDKVPPFQKGTGKGWITS 62 Query: 378 EFHMPPICSPLVRP-----GRPA 431 E+ M P + + P GRP+ Sbjct: 63 EYGMLPRATEVRNPREVTKGRPS 85
>RNPH_ZYMMO (Q5NRL6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 35.8 bits (81), Expect = 0.050 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + R ++ G A GS L+ GDT +L + LE P QG V Sbjct: 1 MRPSGRTPDQLRSLSIETGFTRHAEGSCLISFGDTRVLVTASLEERLPSWLRGKGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BORPE (Q7VXY3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 35.8 bits (81), Expect = 0.050 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 377 RP R + RP ++ G A GS LVR G+T +L + LE + P + +G V Sbjct: 11 RPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEGWVTA 70 Query: 378 EFHMPP 395 E+ M P Sbjct: 71 EYGMLP 76
>RNPH_BORBR (Q7WI90) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 35.8 bits (81), Expect = 0.050 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 377 RP R + RP ++ G A GS LVR G+T +L + LE + P + +G V Sbjct: 11 RPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTHVLCTASVLEKVPPFLKGRGEGWVTA 70 Query: 378 EFHMPP 395 E+ M P Sbjct: 71 EYGMLP 76
>RNPH_MANSM (Q65W01) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 35.8 bits (81), Expect = 0.050 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + E RP + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPNNRAVNEPRPIKITRHYTKHAEGSVLVEFGDTKVICTATVEDSVPRFLKGQGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_YERPS (Q66GE1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.050 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_YERPE (Q8ZJP8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.050 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T+ A GS LV GDT +L + +E P + QG + Sbjct: 1 MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_ERWCT (Q6DAW2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.050 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R + RP T A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPTGRSAQQVRPLTFTRHYTKHAEGSVLVEFGDTKVLCNATVEEGVPRFLKGQGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BRUSU (Q8G2Y5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.050 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRAADEMRAISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNTGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BRUME (Q8YEV2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.050 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R E R + G A GS LV+ GDT +L + LE P +G V Sbjct: 1 MRPSKRAADEMRTISFERGVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNTGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_PASMU (Q9CJW5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.4 bits (80), Expect = 0.066 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + RP + A GS LV GDT +L + +E P + +QG V Sbjct: 1 MRPNERANNQPRPIKITRHYTKHAEGSVLVEFGDTKVLCTATVEESVPRFLKGQNQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>PNP_BUCBP (Q89AF8) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 693 Score = 35.0 bits (79), Expect = 0.086 Identities = 19/49 (38%), Positives = 24/49 (48%) Frame = +3 Query: 180 RHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 326 R L+ +R D R E R V G + HGSAL G+T L S+ L Sbjct: 308 RVLKNRIRIDGRNKDEIRTLDVRTGVLPRVHGSALFTRGETQSLVSVTL 356
>RNPH_RALSO (Q8XXF5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.0 bits (79), Expect = 0.086 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R+ + RP T+ A GS LV GDT +L + + PP + +G V Sbjct: 1 MRPSGRQPDQLRPVTLTRHYTRHAEGSVLVCFGDTHVLCTASVLPKVPPHKKGSGEGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_SHEON (Q8E9L4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 34.7 bits (78), Expect = 0.11 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R A+ RP T+ + A GS LV G+T +L + P + QG V Sbjct: 1 MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_METCA (Q602N9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP RR + R A GS LV GDT ++ + +E PP + G + Sbjct: 1 MRPSGRRPDQLRRIAFTCNYTKHAEGSVLVEFGDTRVICTASVEERVPPFLKGKGSGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RHIME (Q92SK2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 34.3 bits (77), Expect = 0.15 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R+ + R + A GS LVR GDT +L + LE P +G + Sbjct: 1 MRPSGRKTDQMRKVSFERSFSKHAEGSCLVRFGDTHVLCTASLEEKVPAWLRNGGKGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BACSK (Q5WEM3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 250 Score = 34.3 bits (77), Expect = 0.15 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R+ + R + A GS L+ +GDT ++ + +E PP ++G +A Sbjct: 1 MRQDGRKQNQLREVEIIPHFTKHAEGSVLISVGDTKVICTASIENRVPPFLRGQNKGWLA 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYSMLP 67
>PNP_RICPR (Q9ZD43) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 745 Score = 34.3 bits (77), Expect = 0.15 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 317 L +++R D R + R +G + SAHGSAL G+T L S Sbjct: 311 LEKNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVS 354
>RNPH_VIBPA (Q87T93) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.19 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R+ + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRKADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGRGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_VIBCH (Q9KVD6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.19 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RPD R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_GEOSL (Q74C79) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.19 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R A R + + A GS LV GDT +L + +E PP G V Sbjct: 1 MRSDGRNPASLRNIRITRKYLKHAEGSVLVEFGDTKVLCTASVEESVPPFLRGKGGGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYSMLP 67
>PNP_BACSU (P50849) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15) Length = 704 Score = 33.9 bits (76), Expect = 0.19 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 192 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLA 314 E VRPD R + + RP + +G + HGS L G T L+ Sbjct: 312 EKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALS 352
>RNPH_DESPS (Q6ANS2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 236 Score = 33.5 bits (75), Expect = 0.25 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R + R RP ++ G A S L+R+G+T ++ + +E PP +G + Sbjct: 3 MRQNNRTAESLRPISIERGVQLHADASVLIRMGNTHVICGVSVEESVPPFMRGSGKGWIT 62 Query: 375 VEFHMPP 395 E+ M P Sbjct: 63 AEYGMLP 69
>RNPH_PSEAE (P50597) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R + RP + A GS LV GDT ++ ++ E P + QG + Sbjct: 3 RPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTA 62 Query: 378 EFHMPP 395 E+ M P Sbjct: 63 EYGMLP 68
>RNPH_HAEDU (Q7VP10) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + RP + A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPNHRENNQIRPVKITRHYTRYAEGSVLIEFGETKVLCNASIEESVPRFLKGQQQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_BACHK (Q6HD42) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMIP 67
>RNPH_BACCZ (Q633V4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMIP 67
>RNPH_BACCR (Q817P3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMIP 67
>RNPH_BACC1 (Q72ZT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMIP 67
>RNPH_BACAN (Q81LA9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.5 bits (75), Expect = 0.25 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E R + + GS L+ +GDT ++ S +E PP +G V Sbjct: 1 MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMIP 67
>RNPH_XANCP (Q8P5T5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 33.5 bits (75), Expect = 0.25 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R + RP + A GS LV GDT +L + +E P +G V Sbjct: 5 RPSGRTADQLRPVRIERAFTRHAEGSVLVSFGDTRVLCTASVENRVPNFLRGKGEGWVTA 64 Query: 378 EFHMPP 395 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_XANAC (Q8PH63) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 33.5 bits (75), Expect = 0.25 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R + RP + A GS LV GDT +L + +E P +G V Sbjct: 5 RPSGRTADQLRPVRIERSFTRHAEGSVLVSFGDTRVLCTASVENRVPGFLRGKGEGWVTA 64 Query: 378 EFHMPP 395 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_OCEIH (Q8EPJ5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 33.1 bits (74), Expect = 0.33 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R + + R + +S GS L+ +G+T ++ + +E PP +G + Sbjct: 1 MRNDQREVNQLRNINITTNYISHPEGSVLIEMGNTKVICNASIEDRVPPFMRGQGKGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYAMLP 67
>RNPH_STRCO (Q9S2H7) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 33.1 bits (74), Expect = 0.33 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 R D R + RP T+ G A GS LV GDT +L + + P + +G V Sbjct: 3 RIDGRTPQQLRPVTIERGWSKHAEGSVLVSFGDTKVLCNASVTEGVPRWRKGSGEGWVTA 62 Query: 378 EFHMPP 395 E+ M P Sbjct: 63 EYAMLP 68
>RNPH_VIBVY (Q7MPT3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.7 bits (73), Expect = 0.43 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRAADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_VIBVU (Q8DDX4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.7 bits (73), Expect = 0.43 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + RP + + A GS LV G+T +L + +E P + +G V Sbjct: 1 MRPNDRAADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 32.7 bits (73), Expect = 0.43 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +3 Query: 204 PDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP--AETPDQGSVAV 377 P A P T AL V + A + T + + E ++PP AETP+ SVAV Sbjct: 287 PVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEPETIAPPVVAETPEVASVAV 346 Query: 378 EFHMPPICSPLVRPGRPA 431 PP+ P+ PA Sbjct: 347 AETTPPVVPPVAAESIPA 364
>COBB_STRCO (Q9RJ16) Cobyrinic acid A,C-diamide synthase| Length = 486 Score = 32.7 bits (73), Expect = 0.43 Identities = 37/106 (34%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Frame = +3 Query: 150 RRLFPLAFLERHLRESVRPDARRLAEARPTTVALGA--VSSAHGSALVRLG-DTAMLASI 320 RR P+ RHL + P A R ++A A+GA ALV L T L+ Sbjct: 186 RRAAPVETPSRHL--GLVPVAERGSDAVDAVAAMGARVADGCDLEALVGLARSTGALSCA 243 Query: 321 KLE-----VMSPPAETPDQGSVAVEFHMPPICSPLVRPGRPAEAAP 443 + V SPP P A PP PLVRPGRP AP Sbjct: 244 AWDAGEALVSSPPPPLPVPSPGAA----PP--DPLVRPGRPRPQAP 283
>RNPH_GEOKA (Q5KWI5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 256 Score = 32.3 bits (72), Expect = 0.56 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E RP + + A GS L+ +GDT ++ + +E P +G + Sbjct: 1 MRADGRSSCELRPVHIHPHYMKHAEGSVLIEVGDTKVICTATVEEKVPSFMRGGGKGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_RHOBA (Q7URE2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 32.3 bits (72), Expect = 0.56 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +3 Query: 195 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 371 S AR + RP + G + S S L + G T +L + +E PP E +G V Sbjct: 3 SATDSARPHDQIRPVEIECGYLESNPASVLYKSGKTIVLCTASVETNVPPWMEGRGKGWV 62 Query: 372 AVEFHMPP 395 E++M P Sbjct: 63 TAEYNMLP 70
>RNPH_LEGPN (Q9X528) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 0.56 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 374 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPL (Q5WV28) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 0.56 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 374 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPH (Q5ZTZ6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 0.56 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 374 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_LEGPA (Q5X3P0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 32.3 bits (72), Expect = 0.56 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 374 +RP R + RP T+ + A GS LV G T ++ + + E + + +QG + Sbjct: 1 MRPSNREHDQLRPVTITRNFTNYAEGSVLVEFGQTKVICNASIVEGVPRFLKGKNQGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_HAEIN (P44444) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.0 bits (71), Expect = 0.73 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + R + A GS LV GDT +L + +E P + QG V Sbjct: 1 MRPNNRENNQPRQIKITRNYTKHAEGSVLVEFGDTKVLCTATVEDAVPRFLKGQGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_XYLFA (Q9PD74) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 32.0 bits (71), Expect = 0.73 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R+ RP + A GS LV G+T ++ + +E P +G V Sbjct: 5 RPSGRQADALRPVRIERAFTCHAEGSVLVSFGNTLVVCTASVEAKVPVFLRNKGEGWVTA 64 Query: 378 EFHMPP 395 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_BURPS (Q63RV5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 31.6 bits (70), Expect = 0.95 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +3 Query: 195 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 371 S+RP RR + R + A G+ LV GDT ++ + + P QG + Sbjct: 5 SLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWL 64 Query: 372 AVEFHMPP 395 E+ M P Sbjct: 65 TAEYGMLP 72
>RNPH_BURMA (Q62HZ8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 31.6 bits (70), Expect = 0.95 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +3 Query: 195 SVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSV 371 S+RP RR + R + A G+ LV GDT ++ + + P QG + Sbjct: 5 SLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWL 64 Query: 372 AVEFHMPP 395 E+ M P Sbjct: 65 TAEYGMLP 72
>RNPH_LEIXX (Q6AEK9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 251 Score = 31.6 bits (70), Expect = 0.95 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +3 Query: 186 LRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQ 362 + +++R D R + RP T+ A GSALV G T +L + P + Sbjct: 1 MTDTIRADGRTADQLRPVTIERAWNRKAEGSALVSFGGTRVLCTASFTNGVPRWMSGKGR 60 Query: 363 GSVAVEFHMPP 395 G V E+ M P Sbjct: 61 GWVTAEYAMLP 71
>RNPH_PSESM (Q88BE0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 31.6 bits (70), Expect = 0.95 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R + R + A GS LV GDT ++ ++ +E P + QG + Sbjct: 3 RPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTA 62 Query: 378 EFHMPP 395 E+ M P Sbjct: 63 EYGMLP 68
>RNPH_COXBU (Q83EL9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 31.6 bits (70), Expect = 0.95 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVA 374 +RP R E RP + A GS LV LG+T ++ + + E + + +QG + Sbjct: 1 MRPSKRAANELRPLSFTTQFTRYAEGSVLVTLGNTKVICNASIVEGVPRFLKNSEQGWLT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>RNPH_XYLFT (Q87DG3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 31.6 bits (70), Expect = 0.95 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R+ RP + A GS LV G+T ++ + +E P +G + Sbjct: 5 RPSGRQADALRPVRIERAFTCHAEGSVLVSFGNTLVVCTASVEAKVPVFLRNKGEGWITA 64 Query: 378 EFHMPP 395 E+ M P Sbjct: 65 EYGMLP 70
>RNPH_SYMTH (Q67SL5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 273 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R E RP + A GS L+ +G T ++ + LE PP +G + Sbjct: 1 MRQDGRLPHEMRPVRITRHYNIHAEGSVLIEVGRTRVICTATLEDRVPPFLRGRGEGWIT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>EXOS4_HUMAN (Q9NPD3) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) (p12A) Length = 244 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 168 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 320 A LE + R D RR E R +G + A GSA + G+T LA + Sbjct: 1 AGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVV 51
>SOX11_HUMAN (P35716) Transcription factor SOX-11| Length = 441 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +3 Query: 243 VALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSP 407 ++L SAH ++ +LG A ++ L ++ ++ +GS+ F P C+P Sbjct: 365 LSLNFSQSAHSASEQQLGGGAAAGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTP 419
>RRP41_SCHPO (O42872) Putative exosome complex exonuclease RRP41 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 41) Length = 242 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 192 ESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 320 E +R D RR E R +G S +GSA + LG+T +L + Sbjct: 10 EGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIV 52
>EXOS4_MOUSE (Q921I9) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) Length = 244 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 168 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASI 320 A LE + R D RR E R +G + A GSA + G+T LA + Sbjct: 1 AGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVV 51
>RNPH_PSEPK (Q88C89) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVAV 377 RP R + R + A GS LV GDT ++ ++ +E P + QG + Sbjct: 3 RPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTA 62 Query: 378 EFHMPP 395 E+ M P Sbjct: 63 EYGMLP 68
>RNPH_CHRVO (Q7MBD4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP R R + A GS LV GDT ++ + +E P + QG V Sbjct: 1 MRPSQRSADAMRVVRLTRSYTKHAEGSVLVEFGDTKVICTASVEETVPSFLKGKGQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>PNP_BUCAI (P57454) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 707 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +3 Query: 132 MEVE-AYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAM 308 +E+E ++++ +R L R D R R V G + HGSAL G+T Sbjct: 291 LEIEDIFQKIEKKVVRKRILSNQTRIDGREKDMIRALDVRTGILPRTHGSALFTRGETQS 350 Query: 309 LASIKL 326 L S+ L Sbjct: 351 LVSVTL 356
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +3 Query: 225 EARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVM--SPPAETPDQGSVAVEFHMPPI 398 E++P TVA SSA + LG A L ++ V +PPA++ Sbjct: 492 ESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQS--------------- 536 Query: 399 CSPLVRPGRPAEAAPV 446 +P + PG PA +APV Sbjct: 537 LNPFLAPGAPANSAPV 552
>EFG_THIDA (Q3SLQ2) Elongation factor G (EF-G)| Length = 696 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 174 LERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET 353 + ++L E P+A +A R T+A V G+A G AML + +E+M P + Sbjct: 234 MNKYLEEGDLPEADIIAALRARTIASEIVPMMCGTAFKNKGVQAMLDKV-IELMPAPTDI 292 Query: 354 P 356 P Sbjct: 293 P 293
>K2C5_RAT (Q6P6Q2) Keratin, type II cytoskeletal 5 (Cytokeratin-5) (CK-5)| (Keratin-5) (K5) Length = 576 Score = 30.4 bits (67), Expect = 2.1 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -3 Query: 424 RPGLTSGEQIGGMWNSTATDPWSGVSAGGDITSSLIDASMAVSPRRT 284 R GL SG +GG S ++ G S+GG +SS+ S S RR+ Sbjct: 527 RRGLGSGLSVGGSGFSASSGQGGGFSSGGGSSSSVKFVSTTSSSRRS 573
>RNPH_DEIRA (Q9RU11) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = +3 Query: 207 DARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL-EVMSPPAETPDQGSVAVEF 383 + R RP +V G A GSA +++G T +LA++ L + +P +G + E+ Sbjct: 10 EGRDALTPRPVSVQRGVNPHAPGSAHLKMGRTEILATVTLDDKPAPHMRGKKEGWLTAEY 69 Query: 384 HMPP 395 M P Sbjct: 70 SMLP 73
>RNPH_NITEU (Q82XJ4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIK-LEVMSPPAETPDQGSVAV 377 R + R A+ RP + V A GS L+ G+T ++ + +E + P + QG + Sbjct: 3 RCNNRAPAQMRPVRIIRHYVRHAEGSVLIEYGETRVICTASVIEKVPPFLKGAGQGWLTA 62 Query: 378 EFHMPP 395 E+ M P Sbjct: 63 EYGMLP 68
>PATR_MYCTU (P72039) Putative phenylalanine aminotransferase (EC 2.6.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 2.1 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +3 Query: 168 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLG 296 A++E ++R+ +RPD+ L A V L S A+G A +R+G Sbjct: 186 AYVE-YIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIG 227
>PATR_MYCBO (Q7TVQ0) Putative phenylalanine aminotransferase (EC 2.6.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 2.1 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +3 Query: 168 AFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLG 296 A++E ++R+ +RPD+ L A V L S A+G A +R+G Sbjct: 186 AYVE-YIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIG 227
>RNPH_TROWT (Q83FT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R ++R E RP + G A GSAL+ G+T +L + + PP G + Sbjct: 11 LRKNSRAHDEIRPVKIIRGWNIYAEGSALIAFGNTRVLCNATFQRGVPPFLRGQRSGWIT 70 Query: 375 VEFHMPP 395 E+ M P Sbjct: 71 AEYAMLP 77
>RNPH_TROW8 (Q83HF6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R ++R E RP + G A GSAL+ G+T +L + + PP G + Sbjct: 11 LRKNSRAHDEIRPVKIIRGWNIYAEGSALIAFGNTRVLCNATFQRGVPPFLRGQRSGWIT 70 Query: 375 VEFHMPP 395 E+ M P Sbjct: 71 AEYAMLP 77
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 222 AEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL--EVMSPPAE 350 AEA TT G S HGS +++M ++I L E MSPP E Sbjct: 411 AEAGSTTSVSGHGGSGHGSGAAFSANSSMKSAINLGNEKMSPPEE 455
>RNPH_PASHA (Q9AES0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +RP+ R + R + A GS L+ G+T +L + +E P + QG V Sbjct: 1 MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVEESVPRFLKGQQQGWVT 60 Query: 375 VEFHMPP 395 E+ M P Sbjct: 61 AEYGMLP 67
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +3 Query: 204 PDARRLAEARPTTVALGA----VSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSV 371 P R + P T+ + SSA G+ + +A A+ + + PPA P GS Sbjct: 1016 PSLRGSSTTAPGTITTDSGPAVASSASGTGSTTIATSANSAASTVNALGPPATGPSGGSP 1075 Query: 372 AVEFHMPP 395 A H+PP Sbjct: 1076 AQ--HLPP 1081
>RNPH_ANASP (Q8Z0M2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +3 Query: 201 RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET-PDQGSVAV 377 RPD R+ E RP A GS L G+T +L ++ + P T +G + Sbjct: 5 RPDGRKPYELRPINFHTKFTRFAPGSVLTICGETKVLCTVSVAESVPKFLTGSGKGWLTA 64 Query: 378 EFHMPP 395 E+ M P Sbjct: 65 EYRMLP 70
>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) Length = 783 Score = 29.6 bits (65), Expect = 3.6 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +3 Query: 138 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 317 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNVVAKEVFRNIILNEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 318 IKLE 329 + + Sbjct: 397 VTFD 400
>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 29.6 bits (65), Expect = 3.6 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +3 Query: 138 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 317 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNVVAKEVFRSIVLNEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 318 IKLE 329 + + Sbjct: 397 VTFD 400
>PNP_PSEPU (O87792) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 701 Score = 29.6 bits (65), Expect = 3.6 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +3 Query: 180 RHLRESV-----RPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAML 311 R +RE++ R D R RP + +G + HGSAL G+T L Sbjct: 304 RTVRENIVNGKPRIDGRDNKTVRPLNIEVGVLPKTHGSALFTRGETQAL 352
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney| disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 3.6 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3 Query: 237 TTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGSVAVEFHMPPICSPLVR 416 T A +S+A+ SALV + + ++ SIK+ GS+ +E P + S + R Sbjct: 1444 TVTASNNISAANDSALVEVQEPVLVTSIKV-----------NGSLGLELQQPYLFSAVGR 1492 Query: 417 PGRPA 431 GRPA Sbjct: 1493 -GRPA 1496
>MRAW_XANC5 (Q3BXF9) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 337 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +3 Query: 81 GMAAETDATAPGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAV 260 G+ A DA PGG + + F+ R+ + P RRL EA+P L V Sbjct: 221 GLDAALDALKPGGRLAVISFHSLEDRIVKQFMARYAKAP--PSNRRLPEAQPFVPTLQLV 278 Query: 261 SSA 269 S A Sbjct: 279 SGA 281
>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = +3 Query: 138 VEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLAS 317 +E++ + F L E R D R L R + + + HGSAL + G T +L + Sbjct: 337 IESFNIVAKEVFRSIILNEYKRCDGRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCT 396 Query: 318 IKLE 329 + + Sbjct: 397 VTFD 400
>PROB_PSESM (Q889F0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 372 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3 Query: 204 PDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMS 338 PDA+ + EAR AL AV+ G AL R G L + +L S Sbjct: 187 PDAQLIYEARADDPALDAVAGGTGGALGRGGMQTKLRAARLAARS 231
>Y099_SULSO (P95962) UPF0173 metal-dependent hydrolase SSO0099| Length = 227 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +3 Query: 252 GAVSSAHGSALVRLGDTAMLASIKL--EVMSPP-AETPDQGSVAVEFHMPPICSPLVRPG 422 GA+ SA G + GDT + +KL EV P A P G ++ + I L++P Sbjct: 125 GAIVSAEGITVYHAGDTGLFEDMKLIGEVFKPDYALLPIGGRFTMDPYQASISVELIKPK 184 Query: 423 RPA 431 + A Sbjct: 185 KGA 187
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = -3 Query: 442 GAASAGRPGLTSGEQIGGMWNSTATDPWSGVSAGGDITSSLIDASMAVSPRRTR 281 GAAS+G PG TSG Q S + P + +S+G ++S + A SP R R Sbjct: 455 GAASSGAPGPTSGSQ----GQSQPSAPTTKLSSGTLRSASSPRGARARSPSRGR 504
>RNPH_BIFLO (Q8G7I0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = +3 Query: 198 VRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPP-AETPDQGSVA 374 +R D R++ E RP + + GS L+ G+T ++ + P + G V Sbjct: 8 IRADGRKVDELRPVRITRHFTDAPEGSVLIECGNTRVMCTATFTPGVPRWRKDSGLGWVT 67 Query: 375 VEFHMPP 395 E+ M P Sbjct: 68 AEYSMLP 74
>PROB_PSEF5 (Q4K5T9) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 368 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3 Query: 204 PDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMS 338 PDA+ + EAR AL AV+ G AL R G L + +L S Sbjct: 183 PDAQLIYEARADDPALDAVAGGTGGALGRGGMQTKLRAARLAARS 227
>JHD3B_MOUSE (Q91VY5) JmjC domain-containing histone demethylation protein 3B| (EC 1.14.11.-) (Jumonji domain-containing protein 2B) Length = 1086 Score = 28.5 bits (62), Expect = 8.1 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Frame = +3 Query: 183 HLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKLEVMSPPAET--- 353 H E V D R + RPT + + S + A+ + EV+ PP + Sbjct: 456 HEAEGVEEDGR--GKPRPTKARNKKKTPSPSSPPLLSAPPALFPTE--EVLRPPPQPKSP 511 Query: 354 -PDQGSVAVEFHMPPICSPLVRPGRPAEAAPV 446 P G +A E PP +V PG P E A V Sbjct: 512 GPAMGPMAAEGGPPPTPLNVVPPGAPVEEAEV 543
>PNP_YEREN (O34275) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 706 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/76 (30%), Positives = 29/76 (38%) Frame = +3 Query: 99 DATAPGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRLAEARPTTVALGAVSSAHGS 278 DA + G +E + R R LR R D R R V G + HGS Sbjct: 289 DAAEIQDILGSVEKDVVR--------SRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGS 340 Query: 279 ALVRLGDTAMLASIKL 326 AL G+T L + L Sbjct: 341 ALFTRGETQALVTATL 356
>PNP_BUCAP (Q8K9H5) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 707 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +3 Query: 177 ERHLRESVRPDARRLAEARPTTVALGAVSSAHGSALVRLGDTAMLASIKL 326 +R L R D R R + G + HGS+L G+T L S+ L Sbjct: 307 KRILNNENRIDGREKDMIRALDIRTGVLPRTHGSSLFTRGETQSLVSVTL 356
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +3 Query: 264 SAHGSALVRLGDTAMLASIKLEVMSPPAETPDQGS 368 S+ ++V LG T + +V+SPP++TP+Q + Sbjct: 720 SSDTGSVVSLGHTTPSSDYNNDVISPPSQTPEQST 754 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.309 0.117 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,696,678 Number of Sequences: 219361 Number of extensions: 540476 Number of successful extensions: 2192 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 2126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2190 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
