ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479023.1| Oryza sativa (japonica cultivar-group), mRNA 262 8e-67
2dbj|AK073214.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 8e-67
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 242 8e-61
4dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic D... 242 8e-61
5tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 48 0.023
6emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene 48 0.023
7gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downst... 48 0.023
8gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA,... 48 0.023
9gb|AY358370.1| Homo sapiens clone DNA64952 EGFL5 (UNQ671) mRNA, ... 44 0.36
10emb|AL138836.15| Human DNA sequence from clone RP11-88M19 on chr... 44 0.36
11ref|XM_945294.1| PREDICTED: Homo sapiens EGF-like-domain, multip... 44 0.36
12ref|XM_933704.1| PREDICTED: Homo sapiens EGF-like-domain, multip... 44 0.36
13ref|XM_481975.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
14ref|XM_474378.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
15gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.4
16ref|XM_597378.2| PREDICTED: Bos taurus similar to H2.0-like home... 42 1.4
17ref|NM_016698.1| Mus musculus ring finger protein 10 (Rnf10), mRNA 42 1.4
18gb|AC145070.10| Mus musculus chromosome 5, clone RP23-41I11, com... 42 1.4
19gb|BC058527.1| Mus musculus ring finger protein 10, mRNA (cDNA c... 42 1.4
20gb|BC010342.1| Mus musculus ring finger protein 10, mRNA (cDNA c... 42 1.4
21emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 42 1.4
22emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 1.4
23emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
24dbj|AK149972.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.4
25dbj|AK165617.1| Mus musculus cDNA, RIKEN full-length enriched li... 42 1.4
26dbj|AK156502.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.4
27dbj|AK167487.1| Mus musculus 11 days pregnant adult female place... 42 1.4
28dbj|AK168523.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 42 1.4
29dbj|AK172065.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.4
30dbj|AK034953.1| Mus musculus 12 days embryo embryonic body betwe... 42 1.4
31dbj|AK004579.1| Mus musculus adult male lung cDNA, RIKEN full-le... 42 1.4
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
34dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
35dbj|AK129106.1| Mus musculus mRNA for mKIAA0262 protein 42 1.4
36dbj|AK067234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
37emb|AL732341.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.4
38emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.4
39gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
40dbj|AB026621.1| Mus musculus mRNA for RIE2, complete cds 42 1.4
41gb|AC169036.3| Mus musculus BAC clone RP23-382O15 from chromosom... 40 5.7
42gb|AY659043.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.7
43gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, comp... 40 5.7
44gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, comp... 40 5.7
45gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, co... 40 5.7
46ref|XM_534709.2| PREDICTED: Canis familiaris similar to ring fin... 40 5.7
47ref|XM_846239.1| PREDICTED: Canis familiaris similar to ring fin... 40 5.7
48ref|XM_858411.1| PREDICTED: Canis familiaris similar to ring fin... 40 5.7
49ref|XM_858395.1| PREDICTED: Canis familiaris similar to ring fin... 40 5.7
50gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosom... 40 5.7
51ref|XM_762522.1| Giardia lamblia ATCC 50803 60S ribosomal protei... 40 5.7
52gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map ... 40 5.7
53gb|AC006447.24| Mus musculus strain 129/Sv clone ct7-67d14 map 6... 40 5.7
54emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on ch... 40 5.7
55emb|AL354892.19| Human DNA sequence from clone RP1-266L20 on chr... 40 5.7
56gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 ... 40 5.7
57ref|XM_778583.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.7
58emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.7
59gb|BC066027.1| Mus musculus zinc finger protein 503, mRNA (cDNA ... 40 5.7
60gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.7
61gb|AC008069.3| Homo sapiens BAC clone RP11-335I19 from 2, comple... 40 5.7
62gb|AE004947.1| Pseudomonas aeruginosa PAO1, section 508 of 529 o... 40 5.7
63gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 o... 40 5.7
64ref|NM_145459.3| Mus musculus zinc finger protein 503 (Zfp503), ... 40 5.7
65gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.7
66gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 5.7
67dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.7
68emb|X64100.1|SCR1731 S.cereale DNA for dispersed repeat sequence... 40 5.7
69emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome;... 40 5.7
70gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 m... 40 5.7
71gb|AC162945.5| Mus musculus BAC clone RP23-60O19 from chromosome... 40 5.7
72gb|U23096.1|MMU23096 Mus musculus Not I linking clone c5 40 5.7
73gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.7
74gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome ... 40 5.7
75emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, compl... 40 5.7
76gb|AC121815.4| Mus musculus BAC clone RP23-458C8 from 7, complet... 40 5.7
77gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 5.7
78dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.7
79emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro... 40 5.7 
>ref|XM_479023.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1806

 Score =  262 bits (132), Expect = 8e-67
 Identities = 183/200 (91%)
 Strand = Plus / Plus

                                                                       
Query: 217 cccccgggcctgcagtccactctgtggccgctgggacacccggacacgcttctggtgccg 276
           |||||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||||
Sbjct: 194 cccccgagcctgcagtccacgctgtggccgctgggccacccgggcacgctcctggtgccg 253

                                                                       
Query: 277 gagatcgagcgctgggcggacaagcccggcaaccgcctccgccccgttgagctcgagcgc 336
           ||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 254 gagatcgagcggtgggcggccaagccaggcaaccgcctccgccacgtcgagctcgagcgc 313

                                                                       
Query: 337 atcgtcaaagagctccgcaagcgccgccgccaccgccaggccctcgaggtctccgagtgg 396
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 314 atcgtcaaggagctccgcaagcgacgccgccaccgccaggccctcgaggtctctgaatgg 373

                               
Query: 397 atgagtgctaagggtcatgt 416
           |||| ||| ||||| |||||
Sbjct: 374 atgaatgccaagggacatgt 393



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 55  gcctcctcttccctcttcgccgccaggcgccgccttctccacttcgggcgcggcaggctc 114
           |||||||||||| || |||||||| | ||||||||  ||| | ||||  |||||||||||
Sbjct: 17  gcctcctcttccttcctcgccgccggccgccgcctgatccgcctcggctgcggcaggctc 76

               
Query: 115 ctcc 118
           ||||
Sbjct: 77  ctcc 80
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>dbj|AK073214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015N07, full
           insert sequence
          Length = 1806

 Score =  262 bits (132), Expect = 8e-67
 Identities = 183/200 (91%)
 Strand = Plus / Plus

                                                                       
Query: 217 cccccgggcctgcagtccactctgtggccgctgggacacccggacacgcttctggtgccg 276
           |||||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||||
Sbjct: 194 cccccgagcctgcagtccacgctgtggccgctgggccacccgggcacgctcctggtgccg 253

                                                                       
Query: 277 gagatcgagcgctgggcggacaagcccggcaaccgcctccgccccgttgagctcgagcgc 336
           ||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 254 gagatcgagcggtgggcggccaagccaggcaaccgcctccgccacgtcgagctcgagcgc 313

                                                                       
Query: 337 atcgtcaaagagctccgcaagcgccgccgccaccgccaggccctcgaggtctccgagtgg 396
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 314 atcgtcaaggagctccgcaagcgacgccgccaccgccaggccctcgaggtctctgaatgg 373

                               
Query: 397 atgagtgctaagggtcatgt 416
           |||| ||| ||||| |||||
Sbjct: 374 atgaatgccaagggacatgt 393



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 55  gcctcctcttccctcttcgccgccaggcgccgccttctccacttcgggcgcggcaggctc 114
           |||||||||||| || |||||||| | ||||||||  ||| | ||||  |||||||||||
Sbjct: 17  gcctcctcttccttcctcgccgccggccgccgcctgatccgcctcggctgcggcaggctc 76

               
Query: 115 ctcc 118
           ||||
Sbjct: 77  ctcc 80
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  242 bits (122), Expect = 8e-61
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 217      cccccgggcctgcagtccactctgtggccgctgggacacccggacacgcttctggtgccg 276
                |||||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||||
Sbjct: 24368542 cccccgagcctgcagtccacgctgtggccgctgggccacccgggcacgctcctggtgccg 24368483

                                                                            
Query: 277      gagatcgagcgctgggcggacaagcccggcaaccgcctccgccccgttgagctcgagcgc 336
                ||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 24368482 gagatcgagcggtgggcggccaagccaggcaaccgcctccgccacgtcgagctcgagcgc 24368423

                                                                  
Query: 337      atcgtcaaagagctccgcaagcgccgccgccaccgccaggccctcgaggt 386
                |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 24368422 atcgtcaaggagctccgcaagcgacgccgccaccgccaggccctcgaggt 24368373



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 55       gcctcctcttccctcttcgccgccaggcgccgccttctccacttcgggcgcggcaggctc 114
                |||||||||||| || |||||||| | ||||||||  ||| | ||||  |||||||||||
Sbjct: 24368719 gcctcctcttccttcctcgccgccggccgccgcctgatccgcctcggctgcggcaggctc 24368660

                    
Query: 115      ctcc 118
                ||||
Sbjct: 24368659 ctcc 24368656
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>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1579_C03
          Length = 122851

 Score =  242 bits (122), Expect = 8e-61
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                          
Query: 217    cccccgggcctgcagtccactctgtggccgctgggacacccggacacgcttctggtgccg 276
              |||||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||||
Sbjct: 101735 cccccgagcctgcagtccacgctgtggccgctgggccacccgggcacgctcctggtgccg 101676

                                                                          
Query: 277    gagatcgagcgctgggcggacaagcccggcaaccgcctccgccccgttgagctcgagcgc 336
              ||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 101675 gagatcgagcggtgggcggccaagccaggcaaccgcctccgccacgtcgagctcgagcgc 101616

                                                                
Query: 337    atcgtcaaagagctccgcaagcgccgccgccaccgccaggccctcgaggt 386
              |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 101615 atcgtcaaggagctccgcaagcgacgccgccaccgccaggccctcgaggt 101566



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 55     gcctcctcttccctcttcgccgccaggcgccgccttctccacttcgggcgcggcaggctc 114
              |||||||||||| || |||||||| | ||||||||  ||| | ||||  |||||||||||
Sbjct: 101912 gcctcctcttccttcctcgccgccggccgccgcctgatccgcctcggctgcggcaggctc 101853

                  
Query: 115    ctcc 118
              ||||
Sbjct: 101852 ctcc 101849
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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 192    cagcgccgagaggccgccgcggcg 215
              ||||||||||||||||||||||||
Sbjct: 140360 cagcgccgagaggccgccgcggcg 140337



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 192    cagcgccgagaggccgccgcggcg 215
              ||||||||||||||||||||||||
Sbjct: 104242 cagcgccgagaggccgccgcggcg 104265
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>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene
          Length = 5123

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 192  cagcgccgagaggccgccgcggcg 215
            ||||||||||||||||||||||||
Sbjct: 3577 cagcgccgagaggccgccgcggcg 3554
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>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences
          Length = 15141

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 192  cagcgccgagaggccgccgcggcg 215
            ||||||||||||||||||||||||
Sbjct: 8784 cagcgccgagaggccgccgcggcg 8761
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>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds
          Length = 8438

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 192  cagcgccgagaggccgccgcggcg 215
            ||||||||||||||||||||||||
Sbjct: 3487 cagcgccgagaggccgccgcggcg 3510
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>gb|AY358370.1| Homo sapiens clone DNA64952 EGFL5 (UNQ671) mRNA, complete cds
          Length = 2294

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 349 ctccgcaagcgccgccgccaccgcca 374
           |||||||| |||||||||||||||||
Sbjct: 42  ctccgcaaccgccgccgccaccgcca 17
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>emb|AL138836.15| Human DNA sequence from clone RP11-88M19 on chromosome 9 Contains the 5'
              end of the CDK5RAP2 gene for CDK5 regulatory subunit
              associated protein 2 (C48), the EGFL5 gene for
              EGF-like-domain, multiple 5 (MEGF9), an
              S-adenosylhomocysteine hydrolase (AHCY) pseudogene, the 3'
              end of a variant of the FBXW2 gene for  F-box and WD-40
              domain protein 2 (FBW2) and a CpG island, complete sequence
          Length = 188481

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 349    ctccgcaagcgccgccgccaccgcca 374
              |||||||| |||||||||||||||||
Sbjct: 144895 ctccgcaaccgccgccgccaccgcca 144920
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>ref|XM_945294.1| PREDICTED: Homo sapiens EGF-like-domain, multiple 5, transcript
           variant 4 (EGFL5), mRNA
          Length = 2275

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 349 ctccgcaagcgccgccgccaccgcca 374
           |||||||| |||||||||||||||||
Sbjct: 36  ctccgcaaccgccgccgccaccgcca 11
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>ref|XM_933704.1| PREDICTED: Homo sapiens EGF-like-domain, multiple 5, transcript
           variant 2 (EGFL5), mRNA
          Length = 2275

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 349 ctccgcaagcgccgccgccaccgcca 374
           |||||||| |||||||||||||||||
Sbjct: 36  ctccgcaaccgccgccgccaccgcca 11
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>ref|XM_481975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 358 cgccgccgccaccgccaggcc 378
           |||||||||||||||||||||
Sbjct: 798 cgccgccgccaccgccaggcc 778
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>ref|XM_474378.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 282

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 351 ccgcaagcgccgccgccaccgccag 375
           |||| ||||||||||||||||||||
Sbjct: 64  ccgcgagcgccgccgccaccgccag 40
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    aagcgccgccgccaccgccag 375
              |||||||||||||||||||||
Sbjct: 482231 aagcgccgccgccaccgccag 482251
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>ref|XM_597378.2| PREDICTED: Bos taurus similar to H2.0-like homeo box 1 (LOC519165),
           mRNA
          Length = 1867

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 194 gcgccgagaggccgccgcggc 214
           |||||||||||||||||||||
Sbjct: 395 gcgccgagaggccgccgcggc 375
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>ref|NM_016698.1| Mus musculus ring finger protein 10 (Rnf10), mRNA
          Length = 3110

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 489 agagctcccccagcgccgccgccaccgcc 517
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>gb|AC145070.10| Mus musculus chromosome 5, clone RP23-41I11, complete sequence
          Length = 180113

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 345   agagctccgcaagcgccgccgccaccgcc 373
             |||||||| | ||||||||||||||||||
Sbjct: 49182 agagctcccccagcgccgccgccaccgcc 49210
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>gb|BC058527.1| Mus musculus ring finger protein 10, mRNA (cDNA clone MGC:66973
           IMAGE:6816989), complete cds
          Length = 2783

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 325 agagctcccccagcgccgccgccaccgcc 353
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>gb|BC010342.1| Mus musculus ring finger protein 10, mRNA (cDNA clone MGC:12014
           IMAGE:3602969), complete cds
          Length = 2840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 199 agagctcccccagcgccgccgccaccgcc 227
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     ttcgccgccaggcgccgcctt 90
              |||||||||||||||||||||
Sbjct: 175986 ttcgccgccaggcgccgcctt 176006
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 358    cgccgccgccaccgccaggccctcg 382
              ||||||||||||||| |||||||||
Sbjct: 225376 cgccgccgccaccgcgaggccctcg 225352
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 351   ccgcaagcgccgccgccaccgccag 375
             |||| ||||||||||||||||||||
Sbjct: 78841 ccgcgagcgccgccgccaccgccag 78817
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>dbj|AK149972.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530110M21 product:ring finger
           protein 10, full insert sequence
          Length = 2821

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 492 agagctcccccagcgccgccgccaccgcc 520
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>dbj|AK165617.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:G430065N08 product:ring finger protein 10, full
           insert sequence
          Length = 3111

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 490 agagctcccccagcgccgccgccaccgcc 518
to top
>dbj|AK156502.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830027I15 product:ring finger protein
           10, full insert sequence
          Length = 3111

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 488 agagctcccccagcgccgccgccaccgcc 516
to top
>dbj|AK167487.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530017B13
           product:ring finger protein 10, full insert sequence
          Length = 1182

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 489 agagctcccccagcgccgccgccaccgcc 517
to top
>dbj|AK168523.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920029G09 product:ring finger protein
           10, full insert sequence
          Length = 3100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 485 agagctcccccagcgccgccgccaccgcc 513
to top
>dbj|AK172065.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830034D07 product:ring finger protein
           10, full insert sequence
          Length = 3103

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 488 agagctcccccagcgccgccgccaccgcc 516
to top
>dbj|AK034953.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430065M18 product:ring finger protein 10, full
           insert sequence
          Length = 3105

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 488 agagctcccccagcgccgccgccaccgcc 516
to top
>dbj|AK004579.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
           library, clone:1200003L15 product:ring finger protein
           10, full insert sequence
          Length = 3109

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 484 agagctcccccagcgccgccgccaccgcc 512
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 351      ccgcaagcgccgccgccaccgccag 375
                |||| ||||||||||||||||||||
Sbjct: 34773281 ccgcgagcgccgccgccaccgccag 34773257
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 358      cgccgccgccaccgccaggcc 378
                |||||||||||||||||||||
Sbjct: 16842651 cgccgccgccaccgccaggcc 16842671
to top
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F01
          Length = 119248

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   cgccgccgccaccgccaggcc 378
             |||||||||||||||||||||
Sbjct: 56016 cgccgccgccaccgccaggcc 56036
to top
>dbj|AK129106.1| Mus musculus mRNA for mKIAA0262 protein
          Length = 3099

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 478 agagctcccccagcgccgccgccaccgcc 506
to top
>dbj|AK067234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096D14, full
           insert sequence
          Length = 1904

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 351 ccgcaagcgccgccgccaccgccag 375
           |||| ||||||||||||||||||||
Sbjct: 127 ccgcgagcgccgccgccaccgccag 103
to top
>emb|AL732341.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0213E10, complete
             sequence
          Length = 26755

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 351   ccgcaagcgccgccgccaccgccag 375
             |||| ||||||||||||||||||||
Sbjct: 25127 ccgcgagcgccgccgccaccgccag 25103
to top
>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
            sequence
          Length = 110682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 351  ccgcaagcgccgccgccaccgccag 375
            |||| ||||||||||||||||||||
Sbjct: 9250 ccgcgagcgccgccgccaccgccag 9226
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     agcgccgccgccaccgccagg 376
               |||||||||||||||||||||
Sbjct: 2419668 agcgccgccgccaccgccagg 2419688
to top
>dbj|AB026621.1| Mus musculus mRNA for RIE2, complete cds
          Length = 3110

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 345 agagctccgcaagcgccgccgccaccgcc 373
           |||||||| | ||||||||||||||||||
Sbjct: 489 agagctcccccagcgccgccgccaccgcc 517
to top
>gb|AC169036.3| Mus musculus BAC clone RP23-382O15 from chromosome 5, complete sequence
          Length = 215306

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    cgccgccgccaccgccaggc 377
              ||||||||||||||||||||
Sbjct: 204740 cgccgccgccaccgccaggc 204759
to top
>gb|AY659043.1| Synthetic construct Peudomonas aeruginosa clone FLH035710.01F
           PA5358 gene, partial cds
          Length = 891

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gccgccgccaccgccaggcc 378
           ||||||||||||||||||||
Sbjct: 761 gccgccgccaccgccaggcc 742
to top
>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence
          Length = 244671

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     catggcctcctcttccctct 70
              ||||||||||||||||||||
Sbjct: 210120 catggcctcctcttccctct 210101
to top
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence
          Length = 237814

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gcgccgccgccaccgccagg 376
             ||||||||||||||||||||
Sbjct: 12455 gcgccgccgccaccgccagg 12474
to top
>gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, complete sequence
          Length = 163969

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   cgccgccgccaccgccaggc 377
             ||||||||||||||||||||
Sbjct: 37092 cgccgccgccaccgccaggc 37073
to top
>ref|XM_534709.2| PREDICTED: Canis familiaris similar to ring finger protein 10,
           transcript variant 1 (LOC477514), mRNA
          Length = 3745

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 345 agagctccgcaagcgccgccgccaccgc 372
           |||||||| | |||||||||||||||||
Sbjct: 486 agagctcccccagcgccgccgccaccgc 513
to top
>ref|XM_846239.1| PREDICTED: Canis familiaris similar to ring finger protein 10,
           transcript variant 2 (LOC477514), mRNA
          Length = 3856

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 345 agagctccgcaagcgccgccgccaccgc 372
           |||||||| | |||||||||||||||||
Sbjct: 486 agagctcccccagcgccgccgccaccgc 513
to top
>ref|XM_858411.1| PREDICTED: Canis familiaris similar to ring finger protein 10,
           transcript variant 6 (LOC477514), mRNA
          Length = 2141

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 345 agagctccgcaagcgccgccgccaccgc 372
           |||||||| | |||||||||||||||||
Sbjct: 486 agagctcccccagcgccgccgccaccgc 513
to top
>ref|XM_858395.1| PREDICTED: Canis familiaris similar to ring finger protein 10,
           transcript variant 5 (LOC477514), mRNA
          Length = 3671

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 345 agagctccgcaagcgccgccgccaccgc 372
           |||||||| | |||||||||||||||||
Sbjct: 486 agagctcccccagcgccgccgccaccgc 513
to top
>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete
             sequence
          Length = 180177

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gcgccgccgccaccgccagg 376
             ||||||||||||||||||||
Sbjct: 53458 gcgccgccgccaccgccagg 53439
to top
>ref|XM_762522.1| Giardia lamblia ATCC 50803 60S ribosomal protein L27A
           (GLP_576_8571_8122) partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 352 cgcaagcgccgccgccaccgccag 375
           |||||||||||| |||||||||||
Sbjct: 25  cgcaagcgccgcggccaccgccag 48
to top
>gb|AC006404.25| Mus musculus strain 129/Sv clone ct7-141k23 map 6, complete sequence
          Length = 142777

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ccccagaatcccactcccct 152
             ||||||||||||||||||||
Sbjct: 61654 ccccagaatcccactcccct 61635
to top
>gb|AC006447.24| Mus musculus strain 129/Sv clone ct7-67d14 map 6, complete sequence
          Length = 140454

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    ccccagaatcccactcccct 152
              ||||||||||||||||||||
Sbjct: 120951 ccccagaatcccactcccct 120932
to top
>emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on chromosome 6 Contains the
             5' end of a novel gene, a novel gene, a PHD zinc finger
             protein XAP135 (XAP135) and three CpG islands, complete
             sequence
          Length = 91814

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   ccgcaagcgccgccgccaccgcca 374
             |||| |||||||||||||||||||
Sbjct: 91121 ccgccagcgccgccgccaccgcca 91144
to top
>emb|AL354892.19| Human DNA sequence from clone RP1-266L20 on chromosome 6 Contains two
            novel genes, the TCTE3 gene for
            t-complex-associated-testis-expressed 3, the gene for
            hypothetical protein FLJ11152 (FLJ10507 FLJ11458), a
            novel gene (FLJ31451), the 5' end of the gene for
            hypothetical protein FLJ13162 and three CpG islands,
            complete sequence
          Length = 79502

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 351  ccgcaagcgccgccgccaccgcca 374
            |||| |||||||||||||||||||
Sbjct: 1307 ccgccagcgccgccgccaccgcca 1330
to top
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds
          Length = 6281

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 192  cagcgccgagaggccgccgcggcg 215
            |||| |||||||||||||||||||
Sbjct: 4594 cagctccgagaggccgccgcggcg 4571
to top
>ref|XM_778583.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Hairy/enhancer-of-split related with YRPW motif 1 (Hairy
           and enhancer of split related-1) (HESR-1)
           (Cardiovascular helix-loop-helix factor 2) (HES-related
           repressor protein 2 HERP2) (LOC578414), mRNA
          Length = 954

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 gcgccgccgccaccgccagg 376
           ||||||||||||||||||||
Sbjct: 572 gcgccgccgccaccgccagg 553
to top
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ccgcaagcgccgccgccacc 370
              ||||||||||||||||||||
Sbjct: 282934 ccgcaagcgccgccgccacc 282953
to top
>gb|BC066027.1| Mus musculus zinc finger protein 503, mRNA (cDNA clone MGC:91365
           IMAGE:6401144), complete cds
          Length = 4251

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 gcgccgccgccaccgccagg 376
           ||||||||||||||||||||
Sbjct: 870 gcgccgccgccaccgccagg 851
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agcgccgccgccaccgccag 375
              ||||||||||||||||||||
Sbjct: 483264 agcgccgccgccaccgccag 483283
to top
>gb|AC008069.3| Homo sapiens BAC clone RP11-335I19 from 2, complete sequence
          Length = 188002

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tcccactcccctgctcctcc 160
             ||||||||||||||||||||
Sbjct: 98631 tcccactcccctgctcctcc 98612
to top
>gb|AE004947.1| Pseudomonas aeruginosa PAO1, section 508 of 529 of the complete genome
          Length = 11691

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gccgccgccaccgccaggcc 378
             ||||||||||||||||||||
Sbjct: 11000 gccgccgccaccgccaggcc 10981
to top
>gb|AE004924.1| Pseudomonas aeruginosa PAO1, section 485 of 529 of the complete
            genome
          Length = 11101

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 356  agcgccgccgccaccgccaggccc 379
            ||||||||| ||||||||||||||
Sbjct: 6941 agcgccgccaccaccgccaggccc 6964
to top
>ref|NM_145459.3| Mus musculus zinc finger protein 503 (Zfp503), mRNA
          Length = 4251

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 gcgccgccgccaccgccagg 376
           ||||||||||||||||||||
Sbjct: 870 gcgccgccgccaccgccagg 851
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 364     cgccaccgccaggccctcga 383
               ||||||||||||||||||||
Sbjct: 3828436 cgccaccgccaggccctcga 3828417
to top
>gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone rp23-313e8, complete
              sequence
          Length = 182818

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    ccccagaatcccactcccct 152
              ||||||||||||||||||||
Sbjct: 177286 ccccagaatcccactcccct 177267
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cagcgccgagaggccgccgc 211
               ||||||||||||||||||||
Sbjct: 2938482 cagcgccgagaggccgccgc 2938463
to top
>emb|X64100.1|SCR1731 S.cereale DNA for dispersed repeat sequence (R173-1)
          Length = 6676

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  caagcgccgccgccaccgcc 373
            ||||||||||||||||||||
Sbjct: 5020 caagcgccgccgccaccgcc 5039
to top
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7
          Length = 346683

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agcgccgccgccaccgccag 375
              ||||||||||||||||||||
Sbjct: 308458 agcgccgccgccaccgccag 308477
to top
>gb|AC116555.23| Mus musculus strain C57BL/6J clone rp23-160b14 map 8, complete sequence
          Length = 209784

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      tttccttaaacccaagtagc 20
              ||||||||||||||||||||
Sbjct: 150191 tttccttaaacccaagtagc 150210
to top
>gb|AC162945.5| Mus musculus BAC clone RP23-60O19 from chromosome 8, complete sequence
          Length = 221852

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tttccttaaacccaagtagc 20
             ||||||||||||||||||||
Sbjct: 57248 tttccttaaacccaagtagc 57267
to top
>gb|U23096.1|MMU23096 Mus musculus Not I linking clone c5
          Length = 581

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 cgccgccgccaccgccaggc 377
           ||||||||||||||||||||
Sbjct: 187 cgccgccgccaccgccaggc 206
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    agcgccgccgccaccgccag 375
              ||||||||||||||||||||
Sbjct: 405985 agcgccgccgccaccgccag 406004
to top
>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence
          Length = 228830

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      tttccttaaacccaagtagc 20
              ||||||||||||||||||||
Sbjct: 223041 tttccttaaacccaagtagc 223060
to top
>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence
          Length = 298406

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    agcgcatcgtcaaagagctc 351
              ||||||||||||||||||||
Sbjct: 138744 agcgcatcgtcaaagagctc 138763
to top
>gb|AC121815.4| Mus musculus BAC clone RP23-458C8 from 7, complete sequence
          Length = 173154

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     catggcctcctcttccctct 70
              ||||||||||||||||||||
Sbjct: 143463 catggcctcctcttccctct 143482
to top
>gb|AC083894.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-259j8, complete
              sequence
          Length = 167273

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ccccagaatcccactcccct 152
              ||||||||||||||||||||
Sbjct: 134370 ccccagaatcccactcccct 134389
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      cgccatggcctcctcttccc 67
               ||||||||||||||||||||
Sbjct: 3505919 cgccatggcctcctcttccc 3505938
to top
>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
              sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     tggcctcctcttccctcttc 72
              ||||||||||||||||||||
Sbjct: 196701 tggcctcctcttccctcttc 196720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,313,963
Number of Sequences: 3902068
Number of extensions: 3313963
Number of successful extensions: 96276
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94850
Number of HSP's gapped (non-prelim): 1426
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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