ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62c04 |
|---|---|
| Clone Library Name | barley_pub |
>H1_WHEAT (P27806) Histone H1| Length = 238 Score = 122 bits (306), Expect = 4e-28 Identities = 74/127 (58%), Positives = 77/127 (60%), Gaps = 1/127 (0%) Frame = +3 Query: 72 MSTD-AAADIPVPQVEATADPVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 248 MSTD AAADIPVPQVE AD V+ Sbjct: 1 MSTDVAAADIPVPQVEVAADAAVDTPAAKPAKAPKAAKAKKSTPGPKKPRVTPAHPS--- 57 Query: 249 XXXXXXXYAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAA 428 YAEMVSEAI ALKER GSST+AIGKFIEDKHKAHLPANFRKI+LTQIKKLVAA Sbjct: 58 -------YAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAA 110 Query: 429 GKLTKVK 449 GKLTKVK Sbjct: 111 GKLTKVK 117
>H1_MAIZE (P23444) Histone H1| Length = 245 Score = 92.8 bits (229), Expect = 4e-19 Identities = 46/60 (76%), Positives = 52/60 (86%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 YAEMVSEAIT+LKER GSS+ AI KF+EDKHKA LP NFRK++ Q+KKLVA GKLTKVK Sbjct: 52 YAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVK 111
>H1_EUPES (Q9M5W4) Histone H1| Length = 229 Score = 78.2 bits (191), Expect = 9e-15 Identities = 39/60 (65%), Positives = 49/60 (81%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 + EM+S+AI+ LKER GSS AI KF+EDKHK LP+NFRK++L +KKLVA+GKL KVK Sbjct: 54 FFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVK 112
>H1_LYCPN (P40267) Histone H1| Length = 202 Score = 75.1 bits (183), Expect = 8e-14 Identities = 35/61 (57%), Positives = 45/61 (73%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y +M+ EA+ AL E+GGSS A+ K++EDKHK LPANFRKI+ Q+K A GKL K+K Sbjct: 52 YFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIK 111 Query: 450 A 452 A Sbjct: 112 A 112
>H12_ARATH (P26569) Histone H1.2| Length = 273 Score = 71.6 bits (174), Expect = 9e-13 Identities = 37/61 (60%), Positives = 46/61 (75%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y EM+ +AI LKER GSS AI KFIE+KHK+ LP FRK++L +K+LVA+ KL KVK Sbjct: 65 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVK 123 Query: 450 A 452 A Sbjct: 124 A 124
>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)| Length = 265 Score = 71.2 bits (173), Expect = 1e-12 Identities = 36/60 (60%), Positives = 46/60 (76%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y EM+ +AI +LKE+ GSS AI KFIE+K K LPANF+K++L +KK VA+GKL KVK Sbjct: 65 YEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVK 123
>H1_LYCES (P37218) Histone H1| Length = 287 Score = 71.2 bits (173), Expect = 1e-12 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y EM+ +AI LKER GSS AI KFIE+K K+ LP+NF+K++LTQ+KK VA+ KL KVK Sbjct: 59 YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKS-LPSNFKKLLLTQLKKFVASEKLVKVK 117
>H11_ARATH (P26568) Histone H1.1| Length = 274 Score = 70.9 bits (172), Expect = 1e-12 Identities = 37/61 (60%), Positives = 45/61 (73%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y EM+ +AI LKER GSS AI KFIE+K K LP FRK++L +K+LVA+GKL KVK Sbjct: 65 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVK 123 Query: 450 A 452 A Sbjct: 124 A 124
>H11_VOLCA (Q08864) Histone H1-I| Length = 260 Score = 55.5 bits (132), Expect = 6e-08 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 446 Y EMV +AIT LKER GSS A+ KFIE+K+ + NF K + +K V GKL KV Sbjct: 61 YIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKV 120 Query: 447 K 449 K Sbjct: 121 K 121
>H12_VOLCA (Q08865) Histone H1-II| Length = 240 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL-PANFRKIMLTQIKKLVAAGKLTKV 446 Y +MV++AI +LKER GSS A+ KFIE K+ + F K + +K V GKL KV Sbjct: 27 YIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKV 86 Query: 447 K 449 K Sbjct: 87 K 87
>H1_DICDI (P54671) Histone H1| Length = 179 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/61 (44%), Positives = 35/61 (57%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y M+S AI K+R GSS AI K+IE + P F+ + +K+LVA G LT VK Sbjct: 26 YQVMISTAIAHYKDRTGSSQPAIIKYIEANYNV-APDTFKTQLKLALKRLVAKGTLTMVK 84 Query: 450 A 452 A Sbjct: 85 A 85
>H13_WHEAT (P15872) Histone H1.3 (Fragments)| Length = 31 Score = 43.5 bits (101), Expect = 3e-04 Identities = 30/55 (54%), Positives = 30/55 (54%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 443 MVSEAITALKER GS MLTQIKKLVAAGKLTK Sbjct: 1 MVSEAITALKERTGS------------------------MLTQIKKLVAAGKLTK 31
>H1B_STRPU (P15869) Histone H1-beta, late embryonic| Length = 211 Score = 42.0 bits (97), Expect = 7e-04 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN---FRKIMLTQIKKLVAAGKLTK 443 +EMV AITALKERGGSS AI K+IE + + ++ ++T ++K G L + Sbjct: 22 SEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEK----GTLVQ 77 Query: 444 VK 449 VK Sbjct: 78 VK 79
>H5_CHICK (P02259) Histone H5| Length = 189 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/60 (40%), Positives = 38/60 (63%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y+EM++ AI A K RGGSS +I K+I+ +K A+ + + I++L+AAG L + K Sbjct: 28 YSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQ--IKLSIRRLLAAGVLKQTK 85
>H1_ASHGO (Q75C22) Histone H1| Length = 225 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y +++ EA+ +L ERGGSS AI KFI DK+ + A F +K+ + AG+L + K Sbjct: 27 YKDLIVEAVVSLAERGGSSRQAIKKFIRDKYA--VGAKFDGQFNLAVKRGLEAGELAQPK 84
>H1E_CHITE (P40278) Histone H1E| Length = 237 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/59 (42%), Positives = 34/59 (57%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV AIT LKERGGSS +AI KF+ ++K + + +K VA G L + K Sbjct: 55 SEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKASVAKGTLLQAK 112
>H1E_CHIPA (P40262) Histone H1E| Length = 235 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/59 (42%), Positives = 34/59 (57%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV AIT LKERGGSS +AI KF+ ++K + + +K VA G L + K Sbjct: 55 SEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKASVAKGTLLQAK 112
>H1_LYTPI (P06144) Late histone H1| Length = 210 Score = 41.2 bits (95), Expect = 0.001 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTKV 446 ++MV AITALKERGGSS AI K+I +K + A F K +K VA G L +V Sbjct: 22 SQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIK---RALKAGVANGTLVQV 78 Query: 447 K 449 K Sbjct: 79 K 79
>H1O_CHITH (Q07134) Histone H1, orphon| Length = 244 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV A+T LKERGGSS +AI KF+ ++K + + +K VA G L + K Sbjct: 58 SEMVVNAVTTLKERGGSSLIAIKKFVAAQYKVDV-EKLVPFIKKFLKSSVAKGTLLQAK 115
>H1_YEAST (P53551) Histone H1| Length = 258 Score = 40.4 bits (93), Expect = 0.002 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK-AHLPANFRKIMLTQIKKLVAAGKLTKV 446 Y E++ E +TALKER GSS A+ KFI++ + +NF IKK V AG + Sbjct: 47 YRELIIEGLTALKERKGSSRPALKKFIKENYPIVGSASNFDLYFNNAIKKGVEAGDFEQP 106 Query: 447 K 449 K Sbjct: 107 K 107 Score = 35.0 bits (79), Expect = 0.090 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHL--PANFRKIMLTQIKKLVAAGKLTK 443 Y EM+ +++ L + GSS + + K+++D + L +NF + + IKK V G+L + Sbjct: 180 YKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLKTSSNFDYLFNSAIKKCVENGELVQ 239 Query: 444 VK 449 K Sbjct: 240 PK 241
>H5_CAIMO (P06513) Histone H5| Length = 193 Score = 40.4 bits (93), Expect = 0.002 Identities = 23/60 (38%), Positives = 37/60 (61%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y+EM+ AI A K RGGSS +I K+++ +K A+ + + I++L+AAG L + K Sbjct: 29 YSEMIVAAIRAEKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLSIRRLLAAGVLKQTK 86
>H1G_STRPU (P07796) Histone H1-gamma, late| Length = 217 Score = 39.7 bits (91), Expect = 0.004 Identities = 25/59 (42%), Positives = 34/59 (57%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 ++MV A+TALKERGGSST AI K+I + + I +K VA+G L + K Sbjct: 22 SQMVVAAVTALKERGGSSTQAIKKYIAANYTVDMTKQGPFIRRALVKG-VASGALVQTK 79
>H1_ASCIM (Q9UV33) Histone H1| Length = 213 Score = 38.5 bits (88), Expect = 0.008 Identities = 19/32 (59%), Positives = 23/32 (71%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 365 Y EM+++AIT LKER GSS AI KFI+ K Sbjct: 30 YKEMLTKAITELKERNGSSRQAIKKFIQSNFK 61
>H1A_OLILU (P82898) Histone H1A (Fragment)| Length = 47 Score = 38.1 bits (87), Expect = 0.011 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIML 401 Y +MV +AI ALK+R GSS AI K+IE K ++ + L Sbjct: 3 YYDMVKDAIVALKDRNGSSMQAIKKYIEANQKVEFKQHYLRAAL 46
>H5_ANSAN (P02258) Histone H5| Length = 193 Score = 37.7 bits (86), Expect = 0.014 Identities = 21/60 (35%), Positives = 36/60 (60%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y+EM++ AI A K RGGSS +I K+++ +K A+ + + I++L+ G L + K Sbjct: 29 YSEMIAAAIRADKSRGGSSRQSIQKYVKSHYKVGQHADLQ--IKLAIRRLLTTGVLKQTK 86
>H1_DROHY (P17268) Histone H1| Length = 249 Score = 37.0 bits (84), Expect = 0.024 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +MV +I LKERGGSS +AI K+I +K + +K VA GKL + K Sbjct: 51 QMVDASIQNLKERGGSSLLAIKKYISATYKCD-AQKLAPFIKKYLKNSVANGKLIQTK 107
>H1B_CHITE (P40276) Histone H1B| Length = 232 Score = 37.0 bits (84), Expect = 0.024 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV A+ LKERGGSS AI KF+ ++K + + +K V G+L + K Sbjct: 44 SEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVD-KLAPFIKKYLKSAVEKGQLLQTK 101
>H1_TIGCA (P35060) Histone H1| Length = 181 Score = 36.6 bits (83), Expect = 0.031 Identities = 25/57 (43%), Positives = 30/57 (52%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 MV AI ALKER GSS AI K+I +K + N I +K LV KL + K Sbjct: 27 MVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIK-KALKSLVEKKKLVQTK 82
>H13_DROVI (Q94972) Histone H1.3| Length = 250 Score = 36.6 bits (83), Expect = 0.031 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +MV +I LKERGGSS +AI K+I +K + +K VA GKL + K Sbjct: 50 QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKLIQTK 106
>H12_DROVI (Q94555) Histone H1.2| Length = 250 Score = 36.6 bits (83), Expect = 0.031 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +MV +I LKERGGSS +AI K+I +K + +K VA GKL + K Sbjct: 50 QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGKLIQTK 106
>H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)| Length = 196 Score = 36.2 bits (82), Expect = 0.040 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M+ A+ A K R GSS +I K+I++ +K + N + IK+LV +G L + K Sbjct: 28 YSDMILAAVQAEKSRSGSSRQSIQKYIKNHYK--VGENADSQIKLSIKRLVTSGALKQTK 85
>H13_GLYBA (P40265) Histone H1-III| Length = 228 Score = 36.2 bits (82), Expect = 0.040 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV AI LKERGGSS AI KF+ ++K + + ++ V G+L + K Sbjct: 44 SEMVVNAIKTLKERGGSSLQAIKKFLAAQYKVDVD-KLAPFIKKYLRGAVTKGELLQTK 101
>H1B_OLILU (P82899) Histone H1B (Fragment)| Length = 42 Score = 36.2 bits (82), Expect = 0.040 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANF 386 Y E++ AI ALKER GSS AI K+I + +K F Sbjct: 2 YYELIKAAILALKERNGSSAQAIKKYILENNKIEFQQTF 40
>H1A_CHITE (P40275) Histone H1A| Length = 232 Score = 36.2 bits (82), Expect = 0.040 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 ++MV A+ LKERGGSS AI KF+ ++K + + +K V G+L + K Sbjct: 44 SDMVVNAVKTLKERGGSSVQAIKKFLVAQYKVDVD-KLSPFIKKYLKSAVEKGQLLQTK 101
>H12_GLYBA (P40264) Histone H1-II| Length = 232 Score = 36.2 bits (82), Expect = 0.040 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTK 443 +EMV AI LKERGGSS AI KF+ ++K + + + IKK + G + K Sbjct: 44 SEMVVNAIKTLKERGGSSLQAIKKFLVAQYKVDV-----EKLAPFIKKYLKGGAVVK 95
>H1C_CHITE (P40277) Histone H1C| Length = 221 Score = 36.2 bits (82), Expect = 0.040 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV A+ LKERGGSS AI KF+ ++K + + +K V G+L + K Sbjct: 43 SEMVFNAVKTLKERGGSSLQAIKKFLIAQYKVDVD-KLDTFIKKYLKSAVEKGQLLQTK 100
>H1_CANGA (Q6FJX6) Histone H1| Length = 229 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLP--ANFRKIMLTQIKKLVAAGKLTK 443 Y EM+ + ++ G+S +A+ KFI+DK+ ++ NF ++ IKK V +G+L++ Sbjct: 149 YREMILTGVLSMNNGKGASRMALKKFIKDKYPTNVEKVVNFDYLVNNAIKKGVESGELSQ 208 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKH 362 Y ++ E + AL G+S VA+ K+I+D H Sbjct: 14 YKNLIIEGLKALNNGKGASRVALKKYIKDNH 44
>H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)| Length = 194 Score = 35.8 bits (81), Expect = 0.053 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M+ +A+ A K R GSS +I K+I++ + + N + IK+LV +G L + K Sbjct: 26 YSDMILDAVQAKKSRSGSSRQSIQKYIKNNYT--VGENADSQIKLSIKRLVTSGTLKQTK 83
>H1E_STRPU (P19375) Histone H1, early embryonic| Length = 205 Score = 35.8 bits (81), Expect = 0.053 Identities = 24/59 (40%), Positives = 30/59 (50%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 AEMV+ AIT LK+R GSS AI K+I + I +K V GKL + K Sbjct: 22 AEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIK-RALKSGVEKGKLVQTK 79
>H1_CHITH (P21895) Histone H1| Length = 231 Score = 35.4 bits (80), Expect = 0.069 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 ++M+ AI LKERGGSS AI KF+ ++K + +K V G+L + K Sbjct: 43 SDMIVNAIKTLKERGGSSVQAIKKFLVAQYKVDTD-KLSPFIKKYLKSAVEKGQLLQTK 100
>H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)| Length = 224 Score = 35.4 bits (80), Expect = 0.069 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 9/56 (16%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKH---------KAHLPANFRKIMLTQI 410 + M++EA++ LK+R GSS VAI KFI K+ AHL + +K +++++ Sbjct: 40 FINMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKV 95
>H1_DROME (P02255) Histone H1| Length = 256 Score = 35.4 bits (80), Expect = 0.069 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +MV +I LKERGGSS +AI K+I +K + +K V GKL + K Sbjct: 51 QMVDASIKNLKERGGSSLLAIKKYITATYKCD-AQKLAPFIKKYLKSAVVNGKLIQTK 107
>H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')| Length = 193 Score = 35.4 bits (80), Expect = 0.069 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M+ AI A K R GSS +I K+I+ +K + N + IK+LV G L + K Sbjct: 27 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84
>H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))| Length = 193 Score = 35.4 bits (80), Expect = 0.069 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M+ AI A K R GSS +I K+I+ +K + N + IK+LV G L + K Sbjct: 27 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84
>H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')| Length = 193 Score = 35.4 bits (80), Expect = 0.069 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M+ AI A K R GSS +I K+I+ +K + N + IK+LV G L + K Sbjct: 27 YSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYK--VGENADSQIKLSIKRLVTTGVLKQTK 84
>H11_WHEAT (P15871) Histone H1.1 (Fragment)| Length = 25 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGK 344 MVSEAI ALKER GSS AIGK Sbjct: 1 MVSEAIAALKEREGSSEFAIGK 22
>H1A_PLADU (P06894) Histone H1A, sperm| Length = 121 Score = 34.3 bits (77), Expect = 0.15 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHK---AHLPANFRKIMLTQIKKLVAAG 431 A MV AI LKER GSS VAI K+I ++ A L RK + +K+ G Sbjct: 15 ATMVVTAILGLKERKGSSMVAIKKYIAANYRVDVARLAPFIRKFIRKAVKQTKGTG 70
>H11_GLYSA (P40266) Histone H1-I| Length = 233 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV A+ L E+GGSS +AI KF+ +K + + +K V G++ +VK Sbjct: 56 SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI-EKLLPFIKKFLKGAVLKGEVLQVK 113
>H11_GLYBA (P40263) Histone H1-I| Length = 233 Score = 34.3 bits (77), Expect = 0.15 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +EMV A+ L E+GGSS +AI KF+ +K + + +K V G++ +VK Sbjct: 56 SEMVVNALKTLNEKGGSSVIAIKKFLVATYKVEI-EKLLPFIKKFLKGAVLKGEVLQVK 113
>H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protein 6)| Length = 189 Score = 33.9 bits (76), Expect = 0.20 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKLT 440 + MV+ AI++LKER GSS +AI K+I +K L +KI + + +KK VA+ L Sbjct: 37 FINMVTAAISSLKERKGSSKIAILKYITANYK--LGDQVKKINSNLRSALKKGVASKALV 94 Query: 441 K 443 + Sbjct: 95 Q 95
>H11_DROVI (Q24704) Histone H1.1| Length = 250 Score = 33.5 bits (75), Expect = 0.26 Identities = 21/58 (36%), Positives = 30/58 (51%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 +MV +I LKERGGSS +AI K+I +K + +K VA G + + K Sbjct: 50 QMVDASIKNLKERGGSSLLAIKKYIGATYKCD-AQKLAPFIKKYLKNAVANGNVIQTK 106
>H1D_STRPU (P15870) Histone H1-delta| Length = 185 Score = 33.5 bits (75), Expect = 0.26 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 Y++M++ A+ +LKE+ GSS AI K+++ AN + +K+ V +G+L VK Sbjct: 36 YSDMIASALESLKEKKGSSRQAILKYVKANFTVGDNANVH--IKQALKRGVTSGQLRHVK 93
>I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precursor| (IL-15R-alpha) (IL-15RA) Length = 263 Score = 33.1 bits (74), Expect = 0.34 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAA 89 P SPSP AK+ A SP+S AM+T+ A Sbjct: 120 PESPSPSAKEPEAFSPKSDTAMTTETA 146
>H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)| Length = 190 Score = 33.1 bits (74), Expect = 0.34 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 365 + MV+ AI++LKER GSS +AI K+I +K Sbjct: 40 FINMVTAAISSLKERKGSSKIAILKYITANYK 71
>H1_NEUCR (Q8J0U2) Histone H1| Length = 236 Score = 32.7 bits (73), Expect = 0.45 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFI 350 Y +M+++AI ALK+R GSS A+ K++ Sbjct: 40 YLDMITDAIVALKDRAGSSRQALKKYV 66
>H11_CAEEL (P10771) Histone H1.1| Length = 207 Score = 32.7 bits (73), Expect = 0.45 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHK 365 Y M+ EAI LK+R G+S AI KFI +K Sbjct: 40 YINMIKEAIKQLKDRKGASKQAILKFISQNYK 71
>H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein type 2 precursor| [Contains: Sperm-specific protein OE2 (Sperm-specific linker histone H1-like protein OE2); Sperm-specific protein OE3 (Protamine-like OS3)] (Fragment) Length = 126 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 M+ AITA+K R GSS AI K+I +K ++ M K + +G L ++K Sbjct: 12 MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRLK 68
>H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)| Length = 36 Score = 32.7 bits (73), Expect = 0.45 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHK 365 M++ A+ ALKERGGSS AI K+I+ K Sbjct: 1 MITAAVGALKERGGSSRQAILKYIQANFK 29
>H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)| Length = 207 Score = 32.3 bits (72), Expect = 0.58 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFI 350 Y MV+ AI LKER GSS +AI K+I Sbjct: 40 YINMVTAAINGLKERKGSSKIAILKYI 66
>H1_PARAN (P02256) Histone H1, gonadal| Length = 248 Score = 32.3 bits (72), Expect = 0.58 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFR---KIMLTQIKKL----VAAGK 434 EMV AITA+KER GSS I K+++ AN+R ++ +++ VA+G Sbjct: 47 EMVQAAITAMKERKGSSAAKI--------KSYMAANYRVDMNVLAPHVRRALRNGVASGA 98 Query: 435 LTKV 446 L +V Sbjct: 99 LKQV 102
>H1_EMENI (Q9P8F8) Histone H1| Length = 200 Score = 32.3 bits (72), Expect = 0.58 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAG 431 Y +M+ +AI LKER GSS +I K++ +K PA+ + +Q K + AG Sbjct: 22 YRDMIKDAILNLKERNGSSRQSIKKYVLANNKL-APAS-QNAFDSQFNKAIKAG 73
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 32.0 bits (71), Expect = 0.76 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Frame = +3 Query: 9 PASPSPPA-------KDTP-ARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 PASP+PPA + TP A SPR P + ++ AA DI P + V+E Sbjct: 758 PASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLE 809
>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog| Length = 141 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 +P+ P+PP TPA P AA AA+ P P E +P Sbjct: 100 APSVPTPPPTSTPAVPPADAAAPPAVAASTPPSPPSETPRNP 141 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 137 P PPA ++PA S +P ST A VP +A A P V Sbjct: 88 PQETPPPAAESPAPSVPTPPPTSTPA-----VPPADAAAPPAV 125
>LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1194 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +3 Query: 12 ASPSPPAK--DTPARSPRSPAAMSTDAAADIPVPQVEA 119 ASPSPP+ TP +P SPA TD A +P + A Sbjct: 665 ASPSPPSSGHSTPRLAPPSPAREGTDKANHVPKEEAGA 702
>H1_ECHCR (P02257) Histone H1, gonadal (Fragment)| Length = 171 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +3 Query: 276 EMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPA---NFRKIMLTQIK 413 +M++ AI A KER GSS I +I K++ + A + R+ + Q+K Sbjct: 43 DMITAAIAAQKERRGSSVAKIQSYIAAKYRCDINALNPHIRRALKNQVK 91
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 31.6 bits (70), Expect = 0.99 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 128 P SP PA PA+ PR+ AA + AAA P+ + D Sbjct: 1328 PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGD 1367
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 SPA PSPP+ P+ SP +P + S + A P+P A P Sbjct: 115 SPAPPSPPSPAPPSPSPPAPPSPSPPSPAP-PLPPSPAPPSP 155 Score = 31.2 bits (69), Expect = 1.3 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 SPA PSPP+ P+ +P SPA S A P P A P Sbjct: 72 SPAPPSPPSPAPPSPAPPSPAPPS--PAPPSPAPPSPAPPSP 111 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 107 SP+ P+PP+ P+ +P SPA S A P P Sbjct: 235 SPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPP 268 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 6 SPASPSPPAKDTPA-RSPRSPAAMSTDAAADIPVPQVEATADPV 134 +P SP+PP +PA SP SPA S + A P P A PV Sbjct: 203 APPSPAPPVPPSPAPPSPPSPAPPSPPSPAP-PSPSPPAPPSPV 245 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPA-AMSTDAAADIPVPQVEATADPVV 137 +P SPSPPA +P SP SPA + A P P V + P V Sbjct: 125 APPSPSPPAPPSP--SPPSPAPPLPPSPAPPSPSPPVPPSPSPPV 167 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 +P SP+PP+ P+ +P SPA S + A P P A P Sbjct: 97 APPSPAPPSPAPPSPAPPSPAPPSPPSPAP-PSPSPPAPPSP 137 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 9 PASPSPPAKDTPA-RSPRSPAAMS-TDAAADIPVPQVEATADP 131 P SP+PP+ +PA SP SPA S + A PVP A P Sbjct: 212 PPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSP 254 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 P P+PP+ P+ P SPA + A P P + P Sbjct: 300 PTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAP 340 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 +P SP+PP+ P+ +P SPA S A P P A P Sbjct: 82 APPSPAPPSPAPPSPAPPSPAPPS--PAPPSPAPPSPAPPSP 121 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 +P SP+PP+ P+ +P SPA S + P P + A P Sbjct: 44 APPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP-PSPPSPAPP 84
>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) [Contains: Sperm-specific protein PHI-3 (Protamine-like protein PHI-3) (PL-IV)] Length = 202 Score = 31.6 bits (70), Expect = 0.99 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 M+ AITA+K R GSS AI K+I +K ++ M K + +G L + K Sbjct: 47 MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPK 103
>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor| [Contains: Sperm-specific protein OE1 (Sperm-specific linker histone H1-like protein OE1); Sperm-specific protein OE3 (Protamine-like OS3)] Length = 202 Score = 31.6 bits (70), Expect = 0.99 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 M+ AITA+K R GSS AI K+I +K ++ M K + +G L + K Sbjct: 48 MIVAAITAMKNRKGSSVQAIRKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPK 104
>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 225 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 S A P+P +K+TPA A+ + +AA P P A A+P E Sbjct: 171 SSAEPAPSSKETPA------ASEAPSSAAKAPAPAAPAAAEPQAE 209
>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)| Length = 252 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPAN 383 + MV+EAI+++K+R G S AI K+I K+ AN Sbjct: 54 FINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQAN 91
>H1B_PLADU (P06895) Histone H1B, sperm| Length = 119 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 273 AEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 A V AI LK+R GSS VAI K++ + + A + ++K VA G L + K Sbjct: 13 ATAVVAAILGLKDRKGSSMVAIKKYLAANYNVDV-ARLGPFIRRFVRKAVAEGMLVQNK 70
>SECD_MYCTU (Q50634) Protein-export membrane protein secD| Length = 573 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATA-DP 131 +PASP P A+ P +P+ T A+ P P EA A DP Sbjct: 158 APASPQPGAQPRPYPQDPAPSPNPTSPASPPPAPPAEAPATDP 200
>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)| Length = 239 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 S + PPAK TPAR+ PA ++ A A P+P + +V+ Sbjct: 193 STGTGRPPAK-TPARAEEPPAPAASPAPATAPLPDARSPLQKLVD 236
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +3 Query: 18 PSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 PSPPA PA +PR A+ ++ +AA P P E P Sbjct: 418 PSPPA---PAAAPRPSASSASSSAAASPAPAPEPARPP 452
>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)| (Retroviral insertion site 2 protein) Length = 557 Score = 30.0 bits (66), Expect = 2.9 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMS 77 SPA PSPPA +P P SP S Sbjct: 84 SPAEPSPPADPSPPADPGSPVCPS 107
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 12 ASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEA 119 ASP+ PA PA + +PA + T A A P P A Sbjct: 2 ASPAVPANVPPATAAAAPAPVVTAAPASAPTPSTPA 37
>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2| Length = 915 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 15 SPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 SP+PP + P R+ PA + AA + P P T P E Sbjct: 101 SPAPPVHEPPVRAAAQPAPVPV-AAGEAPSPLAPETPAPATE 141 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 3 LSPASPSPPAKDTPARSPRS-PAAMSTDAAADIPVPQVEATADPVVE 140 L+P +P+P + PA +P PAA A P+P E +PV E Sbjct: 131 LAPETPAPATESAPAVAPAGVPAAEPVSEALSAPLP--EPVPEPVPE 175
>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 613 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 3 LSPASPSPPAKDTPARSPRSPAA--MSTDAAADIPVPQVEATA 125 +S S P + +PA P PAA + +D AD+P P V T+ Sbjct: 550 VSDDSDLPESASSPAAGPTKPAASQLESDTIADLPDPTVVTTS 592
>MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (Lol p Vb)| Length = 339 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATAD 128 +PA+P+ PA A +P +PA +T AA VP +AT + Sbjct: 31 APATPATPAAPATAATPATPATPATPAA----VPSGKATTE 67
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +3 Query: 3 LSPASPSPPAKDTPARSPRSP-AAMSTDAAADIPVPQVEATA 125 +SPA+P PA P +P SP AA+ AAA + V TA Sbjct: 746 ISPAAPVAPAAVVPPAAPVSPAAAVQIPAAASLTPATVSPTA 787
>H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)| Length = 232 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKI---MLTQIKKLVAAGKLT 440 Y +M+ AI A+ GSS AI K+I + H+ N K+ + + +KK V +G + Sbjct: 40 YMDMIKGAIQAIDNGTGSSKAAILKYIAQNY--HVGENLPKVNNHLRSVLKKAVDSGDIE 97 Query: 441 KVK 449 + + Sbjct: 98 QTR 100
>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)| Length = 176 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/57 (31%), Positives = 32/57 (56%) Frame = +3 Query: 270 YAEMVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLT 440 Y EM+ + + AL E GS+ AI K+IE + LP ++ + + K+ +G+L+ Sbjct: 15 YPEMIVKTLEALNEPNGSNKSAISKYIETTY-GELPD--ATVLGSHLNKMKDSGELS 68
>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)| Length = 2135 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = +3 Query: 15 SPSPPAKDTPARS-PRSPAAMSTDAAADIPV-PQVEATA 125 SP PPA+ P+ S P +P A++T A +PV P +TA Sbjct: 681 SPDPPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTA 719
>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) Length = 1050 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 15 SPSPPAKDTPARSPRSPAAMSTDAAADIPVP 107 SPSPP +P+ S R+ S+ A +P+P Sbjct: 403 SPSPPCSSSPSPSGRAGPFSSSRCGASVPIP 433
>TR10C_HUMAN (O14798) Tumor necrosis factor receptor superfamily member 10C| precursor (Decoy receptor 1) (DcR1) (Decoy TRAIL receptor without death domain) (TNF-related apoptosis-inducing ligand receptor 3) (TRAIL receptor 3) (TRAIL-R3) (Trail receptor wi Length = 259 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPA-----AMSTDAAADIPVPQVEATADP 131 SP +P+P A++T SP +PA M+T P + T P Sbjct: 186 SPGTPAPAAEETMTTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSP 232 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +3 Query: 6 SPASPSPPAKDTPARSPRSPA-----AMSTDAAADIPVPQVEATADP 131 SP +P+P A++T SP +PA M+T P + T P Sbjct: 171 SPGTPAPAAEETMNTSPGTPAPAAEETMTTSPGTPAPAAEETMTTSP 217
>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum| protein MSE55) Length = 391 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 21 SPPAKDTPARSPRSPAAMSTDAAADIPVPQVEAT 122 +PPA PA +P +PAA T AA+ P P +T Sbjct: 251 NPPA---PAANPSAPAATPTGPAANPPAPAASST 281
>H103_CHICK (P08285) Histone H1.03| Length = 223 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = +3 Query: 27 PAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 P K TPA P+ PAA AAA P V P Sbjct: 122 PKKKTPAAKPKKPAAKKPAAAAKKPKKAVAVKKSP 156
>Y1583_MYCTU (O06607) Hypothetical protein Rv1583c/MT3573.2| Length = 132 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 12 ASPSPPAKDTPARSPRSPAAMSTDAAAD 95 A SPP + PA R+PA ++T ++AD Sbjct: 5 AGGSPPTRRCPATEDRAPATVATPSSAD 32
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPV 134 P P PP A S ++PA A P PQV+A PV Sbjct: 2484 PQQPPPPVPQPQAASSQTPAGQP--AVQPQPQPQVQAQPQPV 2523
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +3 Query: 6 SPASPSPPAKDTPARSP--RSPAAMSTDAAADIPVPQVE 116 SP + SP AK A+SP +SP A S A + P VE Sbjct: 659 SPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVE 697
>H1L_MYTCA (P22974) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) Length = 148 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +3 Query: 279 MVSEAITALKERGGSSTVAIGKFIEDKHKAHLPANFRKIMLTQIKKLVAAGKLTKVK 449 M+ AI A+K R GSS AI K+I +K + M K + +G L + K Sbjct: 47 MIVAAIQAMKNRKGSSVQAIRKYILANNKGINTSRLGSAMKLAFAKGLKSGVLVRPK 103
>PEX14_HUMAN (O75381) Peroxisomal membrane protein PEX14 (Peroxin-14)| (Peroxisomal membrane anchor protein PEX14) (PTS1 receptor docking protein) Length = 377 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +3 Query: 6 SPASPSPPAKDTPAR--SPRSPAAMSTDAAADI-PVPQVEATADP 131 SP++P P+ P + SP SPAA++ +++DI PV ++ P Sbjct: 232 SPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSP 276
>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)| Length = 323 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQ 110 P SP PP+ P+ SP P A +P PQ Sbjct: 179 PPSPPPPSPPPPSPSPPPPPASPPPPPPALPYPQ 212
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 137 P P+PP + + A +PA+ +T A P P + PVV Sbjct: 780 PGPPTPPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPPVV 822
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Frame = +3 Query: 9 PASPSPPAKD-------TPARSPRSPAAMSTDAAADIPVPQVEATAD 128 P +P+PP D TP R S A DAA D PV ++ A+ Sbjct: 216 PGTPTPPTPDQVGGRSSTPKRQASSRLAQLIDAAYDPPVLLLQGAAN 262
>GAG_HTL1M (P14077) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 428 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 137 P+ P+PP +P P D+ IP P VE TA V+ Sbjct: 94 PSRPAPPPPSSPTHDP-------PDSDPQIPPPYVEPTAPQVL 129
>GAG_HTL1A (P03345) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVV 137 P+ P+PP +P P D+ IP P VE TA V+ Sbjct: 95 PSRPAPPPPSSPTHDP-------PDSDPQIPPPYVEPTAPQVL 130
>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1305 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Frame = +3 Query: 9 PASPSPPA-------KDTP-ARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 PASP+PPA + TP A SP P ++ A DI P + V+E Sbjct: 780 PASPAPPASASAFPPRATPQALSPHGPTKPASPTALDISEPLAVSVPPAVLE 831
>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1043 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Frame = +3 Query: 12 ASPSPPAK--DTPARSPRSPAAMSTD-----AAADIPVPQVEATADP 131 ASPSPP+ TP +P SPA TD + + VP+ E A P Sbjct: 514 ASPSPPSSGHSTPRLAPPSPAREGTDKTNHVSKEEAGVPRGEGPAVP 560
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +3 Query: 12 ASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 ASP PP +P +P SP A T +P + A P Sbjct: 770 ASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALP 809
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 3 LSPASPSPPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADPVVE 140 +SP S P ++T + + + T ++P+ +EATA P E Sbjct: 726 VSPEETSVPTEETISTEVTTVSPEETTVPTEVPIVLIEATASPTGE 771
>MYL4_MOUSE (P09541) Myosin light polypeptide 4 (Myosin light chain 1,| atrial/fetal isoform) (MLC1A) (MLC1EMB) Length = 192 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +3 Query: 24 PPAKDTPARSPRSPAAMSTDAAADIPVPQVEATADP 131 PP K P + PAA AA+ P P ++ DP Sbjct: 1 PPKKPEPKKEAAKPAAAPAPAASAAPEPLKDSAFDP 36
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 9 PASPSPPAKDTPARSPRSPAAMSTDAAADIPVP 107 P P PPA P S S A S++ ++ +P P Sbjct: 818 PEGPLPPAPHLPPSSTSSAVASSSETSSRLPAP 850
>PANB_RHILO (Q98NC9) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 286 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -3 Query: 421 TSFLICVSMILRKLAGRCALCLSSMNLPMATVLDPPLSLSAVIASDTIS 275 T I +I R+ G +CL++ P+A +LDP + L ++ D++S Sbjct: 8 TDIRIGAELIRRRKGGVPLVCLTAYTYPVARLLDPHVDL--LLVGDSVS 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,364,804 Number of Sequences: 219361 Number of extensions: 415089 Number of successful extensions: 4143 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 3263 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4044 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
