ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62c03 |
|---|---|
| Clone Library Name | barley_pub |
>PHOP2_XENTR (Q66KD6) Probable phosphatase phospho2 (EC 3.1.3.-)| Length = 238 Score = 45.4 bits (106), Expect = 6e-05 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTM---PWNTLIDTVMGELHAQGKTLR 267 ++VFDFD TII+ +SD W+V + +L + L + W + V L QG Sbjct: 4 LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63 Query: 268 DVADVLRAAPIDP------HVVAAIRAAYSLGCDLRVLSDAXRFFIEAVLDHHGLRGYF 426 D+ ++ A P P H + + ++ D ++SD+ FI+ +L H + F Sbjct: 64 DMKRIMIAIPYTPGMTDLLHFIGQNKDSF----DCIIISDSNTIFIDWILTHANVHNVF 118
>PHOP1_HUMAN (Q8TCT1) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 45.1 bits (105), Expect = 7e-05 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 8/114 (7%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++ FDFD+TI+D +SD+ +V L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87 Query: 268 DVADVLRAAPIDPHVVAAIRAAYSLGC--DLRVLSDAXRFFIEAVL---DHHGL 414 D++ + A P+ P + ++ G ++ ++SDA F +E+ L HH L Sbjct: 88 DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSL 141
>PHOP1_MOUSE (Q8R2H9) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) Length = 267 Score = 43.5 bits (101), Expect = 2e-04 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++ FDFD+TI+D +SD+ +V +L + L T +N + V L QG R Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87 Query: 268 DVADVLRAAPIDPHVVAAIRAAYSLGC--DLRVLSDAXRFFIEAVL---DHHGL 414 D+ V P+ P + ++ G ++ ++SDA F +E+ L HH L Sbjct: 88 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSL 141
>PHOP1_BRARE (Q6DBV4) Probable phosphatase phospho1 (EC 3.1.3.-)| Length = 279 Score = 38.5 bits (88), Expect = 0.007 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTM---PWNTLIDTVMGELHAQGKT-- 261 ++ FDFD+T++D SD+ +V L L T +N + V+ L QG T Sbjct: 37 LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96 Query: 262 -LRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDAXRFFIEAVLDHHGLRGYF 426 +R + L P P ++ + + S ++ +SDA FIE L H G + F Sbjct: 97 AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLF 152
>PHOP2_HUMAN (Q8TCD6) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 37.4 bits (85), Expect = 0.016 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTL 264 +++VFDFD TIID +SD W+V +L L + W + V L +G Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPNKKLPIELRDSYRKGFWTEFMGRVFKYLGDKGVRE 62 Query: 265 RDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDAXRFFIEAVLD 402 ++ + + P P +V D ++SD+ FI+ VL+ Sbjct: 63 HEMKRAVTSLPFTPGMVELFNFIRKNKDKFDCIIISDSNSVFIDWVLE 110
>PHOP2_MOUSE (Q9D9M5) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 37.0 bits (84), Expect = 0.020 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 6/109 (5%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 V++VFDFD TIID +SD W+V D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 262 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDAXRFFIEAVLD 402 ++ + + P ++ + D ++SD+ FI+ VL+ Sbjct: 62 ADELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLE 110
>PHOP2_RAT (Q66HC4) Pyridoxal phosphate phosphatase PHOSPHO2 (EC 3.1.3.74)| Length = 241 Score = 36.6 bits (83), Expect = 0.027 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 6/109 (5%) Frame = +1 Query: 94 VVVVFDFDKTIIDVDSDNWVV----DGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKT 261 V++VFDFD TIID +SD W++ D EL D + W + V L +G Sbjct: 3 VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGL-WTEFMGRVFKYLRDEGVK 61 Query: 262 LRDVADVLRAAPIDPHVVAAIR--AAYSLGCDLRVLSDAXRFFIEAVLD 402 ++ + + P ++ + D ++SD+ FI+ VL+ Sbjct: 62 EEELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLE 110
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 33.1 bits (74), Expect = 0.29 Identities = 25/108 (23%), Positives = 44/108 (40%) Frame = -1 Query: 401 SRTASMKKRXASLRTLRSQPRL*AALMAATTCGSMGAARSTSATSRRVLPCACSSPITVS 222 S ++S +S + S ++ ++++ S ++ S+S++S + S PIT S Sbjct: 154 SPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSS 213 Query: 221 MRVFHGMVGSRRSKSSVAPRPXXXXXXXXXXXXXXXXSNTTTTPAIST 78 H S S SS + RP S T TP+ S+ Sbjct: 214 TSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSS 261
>PHOP1_CHICK (O73884) Phosphoethanolamine/phosphocholine phosphatase (EC| 3.1.3.75) (3X11A) Length = 268 Score = 32.7 bits (73), Expect = 0.38 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%) Frame = +1 Query: 97 VVVFDFDKTIIDVDSDNWVVDGLGATELFDRLLPTMP---WNTLIDTVMGELHAQGKTLR 267 ++VFDFD TII+ SD+ +V L + + + +N + V+ + QG + Sbjct: 28 LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87 Query: 268 DVADVLRAAPID---PHVVAAIRAAYSLGCDLRVLSDAXRFFIEAVLDHHGLRGYF 426 D V P+ P + + + L ++ ++SDA F IE L G F Sbjct: 88 DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKLRAAGFYSLF 142
>GLMM_ZYMMO (Q5NNT4) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 445 Score = 32.0 bits (71), Expect = 0.65 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDG-----LGATELFDRLLPTMPWNTLIDTVMGELHAQG 255 G+ + D D+ II VD +VDG L AT R L + NT + TVM L + Sbjct: 237 GIALDGDADRVII-VDEKGEIVDGDQIMALIATSAQKRNL--LKGNTTVATVMSNLGLER 293 Query: 256 KTLRDVADVLRAAPIDPHVVAAIRA-AYSLG 345 + +LR D HVV A+RA Y++G Sbjct: 294 YLSKLGIQLLRTQVGDRHVVEAMRAGGYTVG 324
>ITA6_CHICK (P26007) Integrin alpha-6 precursor (VLA-6) [Contains: Integrin| alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1072 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 82 EMAGVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 E G+ F +D ++D++SD W +GA + FDR Sbjct: 302 EGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDR 337
>GPH_SYNP7 (Q55039) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 212 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 20/130 (15%) Frame = +1 Query: 100 VVFDFDKTIID--------------------VDSDNWVVDGLGATELFDRLLPTMPWNTL 219 ++FDFD T++D +D ++ ++ R PW Sbjct: 4 IIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRAGLSPWQ-- 61 Query: 220 IDTVMGELHAQGKTLRDVADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDAXRFFIEAVL 399 + + R + D L A + P V + S L +LS R IEA L Sbjct: 62 ------QARLLQRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL 115 Query: 400 DHHGLRGYFS 429 GLR FS Sbjct: 116 QRQGLRSLFS 125
>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1091 Score = 29.6 bits (65), Expect = 3.2 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 G+ F +D ++D+++D W +GA + FDR Sbjct: 311 GLASSFGYDVAVVDLNADGWQDIVIGAPQYFDR 343
>TKRA_ECOLI (P37666) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +1 Query: 127 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 291 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127
>TKRA_ECO57 (P58220) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +1 Query: 127 IDVDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQGKTLRDVADVLRA 291 I V DN+ VD L A ++ PT+ T+ DT+M + + + + +VA+ ++A Sbjct: 73 ISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKA 127
>ITA6_HUMAN (P23229) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1130 Score = 29.3 bits (64), Expect = 4.2 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 91 GVVVVFDFDKTIIDVDSDNWVVDGLGATELFDR 189 G+ F +D ++D++ D W +GA + FDR Sbjct: 350 GLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDR 382
>GPH_VIBVY (Q7MH14) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 233 Score = 28.9 bits (63), Expect = 5.5 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 26/136 (19%) Frame = +1 Query: 97 VVVFDFDKTIID--------VDSDNWVVDGLGATELFDRLLPTMPWNTLIDTVMGELHAQ 252 ++ FD D T++D D V G TEL R D ++G +Q Sbjct: 13 LIAFDLDGTLLDSVPDLAVAADQATRAVGFPGVTELQVRDYV----GNGADILIGRALSQ 68 Query: 253 GKTLR-DVADVLRA-----------------APIDPHVVAAIRAAYSLGCDLRVLSDAXR 378 T+ +++D LRA + + P V ++A + G L ++++ Sbjct: 69 SLTINPELSDELRAQARELFDDFYQQTGHKLSHLYPTVKETLKALHQAGFTLALVTNKPS 128 Query: 379 FFIEAVLDHHGLRGYF 426 F+ VL HG+ YF Sbjct: 129 KFVPDVLQQHGIADYF 144
>GLMM_SYNPX (Q7U9H6) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 462 Score = 28.1 bits (61), Expect = 9.4 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +1 Query: 91 GVVVVFDFD---KTIIDVDSDNWVVDGLGATELFDRLLP---TMPWNTLIDTVMGELHAQ 252 G V+ F FD ++ VD+ VVDG L+ +L +P + L+ TVM L + Sbjct: 242 GAVMGFAFDGDADRMLAVDARGRVVDGDHVLYLWGSVLQDQKALPGDRLVATVMSNLGFE 301 Query: 253 GKTLRDVADVLRAAPIDPHVVAAIRA 330 R ++ R D HV AA+ A Sbjct: 302 RAWERRGGELERTPVGDQHVHAAMVA 327
>FUT13_ARATH (Q9C8W3) Alpha-(1,4)-fucosyltransferase (EC 2.4.1.-) (FT4-M)| (Galactoside 3(4)-L-fucosyltransferase) (FucTC) (AtFUT13) Length = 401 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = -1 Query: 401 SRTASMKKRXASLRTLRSQPRL*AALMAATTCGSMGAARSTSATSRRVLPCACSSPIT 228 S+ SM++ A ++ L P + A CG MG T A S LPC I+ Sbjct: 335 SKFGSMQELAAYVKRLGDDPVAYSEYHAWRRCGLMGNYGKTRAVSLDTLPCRLCEEIS 392
>YHCW_BACSU (P54607) Hypothetical protein yhcW| Length = 220 Score = 28.1 bits (61), Expect = 9.4 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 19/124 (15%) Frame = +1 Query: 100 VVFDFDKTIIDVDSDNWVVDGLGATELFDR---LLPTMPWNTLIDTVMG-----ELHAQ- 252 ++FDFD I+D ++ + V E+F+ +LP W +I T G L Q Sbjct: 5 LIFDFDGLILDTETHEYEV----LQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQI 60 Query: 253 GKTLRD----------VADVLRAAPIDPHVVAAIRAAYSLGCDLRVLSDAXRFFIEAVLD 402 GK L A + + P V A + AA LG + + S + ++ L Sbjct: 61 GKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSGHLK 120 Query: 403 HHGL 414 GL Sbjct: 121 QIGL 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,785,397 Number of Sequences: 219361 Number of extensions: 409264 Number of successful extensions: 1638 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1636 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
