ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast62b12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ438325.1|TAE438325 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3e Length = 612 Score = 337 bits (170), Expect = 2e-89 Identities = 362/425 (85%), Gaps = 6/425 (1%) Strand = Plus / Minus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 |||||| ||||||||||||||||||||||||||| ||||| || |||||||| || || Sbjct: 419 tcccggacttccgcttcgccaccatccccgacggcctgccgccatcggacgcggatgcca 360 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | |||||| | ||| | ||||||||||| |||||||||||||| |||| ||| |||| Sbjct: 359 cgcaggacataccctccctgtgctactccacgatgaccacctgccttccccccttgaaga 300 Query: 166 agctgctccaggagctcaacgccacgcctgggatgccgccggtgacgtgcgttgtggcgg 225 ||||||| ||||||||| || | |||| ||||||||||||||||| ||||||| Sbjct: 299 ggctgctcggggagctcaa---cagggttggg---ccgccggtgacgtgcgtggtggcgg 246 Query: 226 acaacatcatgagcttcaccgttgacgccgcggcggaggtcggcgtgccgtgcgcgctct 285 ||||| | |||||||||| ||| ||||| ||||||||| || | |||||||||| |||| Sbjct: 245 acaacgtgatgagcttcagcgtggacgcggcggcggagatcagggtgccgtgcgtcctct 186 Query: 286 tctttaccgccagcgcctgcggctacgtgggctaccgcaacttcaggttcctcatggata 345 ||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||| | Sbjct: 185 tctggaccgccagcgcctgcggctacattggctaccgcaacttccggttcctcatgcaag 126 Query: 346 agggcatcgctcccctcanagatgaagcgcagctgacgaacgggtacctcgacacgccgg 405 |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 125 agggcatcgctcccctcaaagatgaagcgcagctgagcaacgggtacctggacacgccgg 66 Query: 406 tgcccgatgctcctgggatgagccagcacatgcgcctccgtgacttcccctccttcatct 465 || | | ||||| |||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 65 tggcgcaggctcccgggatgagccggcacatgcgcctccgggacttcccttccttcatct 6 Query: 466 gcacc 470 ||||| Sbjct: 5 gcacc 1
>emb|AJ438324.1|TAE438324 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3c Length = 612 Score = 337 bits (170), Expect = 2e-89 Identities = 362/425 (85%), Gaps = 6/425 (1%) Strand = Plus / Minus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 |||||| ||||||||||||||||||||||||||| ||||| || |||||||| || || Sbjct: 419 tcccggacttccgcttcgccaccatccccgacggcctgccgccatcggacgcggatgcca 360 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | |||||| | ||| | ||||||||||| |||||||||||||| |||| ||| |||| Sbjct: 359 cgcaggacataccctccctgtgctactccacgatgaccacctgccttccccccttgaaga 300 Query: 166 agctgctccaggagctcaacgccacgcctgggatgccgccggtgacgtgcgttgtggcgg 225 ||||||| ||||||||| || | |||| ||||||||||||||||| ||||||| Sbjct: 299 ggctgctcggggagctcaa---cagggttggg---ccgccggtgacgtgcgtggtggcgg 246 Query: 226 acaacatcatgagcttcaccgttgacgccgcggcggaggtcggcgtgccgtgcgcgctct 285 ||||| | |||||||||| ||| ||||| ||||||||| || | |||||||||| |||| Sbjct: 245 acaacgtgatgagcttcagcgtggacgcggcggcggagatcagggtgccgtgcgtcctct 186 Query: 286 tctttaccgccagcgcctgcggctacgtgggctaccgcaacttcaggttcctcatggata 345 ||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||| | Sbjct: 185 tctggaccgccagcgcctgcggctacattggctaccgcaacttccggttcctcatgcaag 126 Query: 346 agggcatcgctcccctcanagatgaagcgcagctgacgaacgggtacctcgacacgccgg 405 |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 125 agggcatcgctcccctcaaagatgaagcgcagctgagcaacgggtacctggacacgccgg 66 Query: 406 tgcccgatgctcctgggatgagccagcacatgcgcctccgtgacttcccctccttcatct 465 || | | ||||| |||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 65 tggcgcaggctcccgggatgagccggcacatgcgcctccgggacttcccttccttcatct 6 Query: 466 gcacc 470 ||||| Sbjct: 5 gcacc 1
>emb|AJ438318.1|TAE438318 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2i2c Length = 313 Score = 317 bits (160), Expect = 2e-83 Identities = 243/271 (89%) Strand = Plus / Minus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 |||||||||||||||||| |||||||||||| | |||||||||| ||| ||||| ||||| Sbjct: 271 gccgccggtgacgtgcgtggtggcggacaacgtgatgagcttcagcgtggacgcggcggc 212 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||| |||||||||| |||||||| ||||||||||||||||||||| ||||||| Sbjct: 211 ggagatcggggtgccgtgcgtgctcttctggaccgccagcgcctgcggctacatgggcta 152 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| |||||||| || | |||||||||||||||||| ||||||||||||||| Sbjct: 151 ccgcaacttccggttcctcgtgcaagagggcatcgctcccctcaaagatgaagcgcagct 92 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 || ||||||||||| |||||||||||| | | ||||| |||||||||| ||||||||| Sbjct: 91 gagcaacgggtacctggacacgccggtggcgcaggctcccgggatgagccggcacatgcg 32 Query: 440 cctccgtgacttcccctccttcatctgcacc 470 |||||| |||||||||||||||||||||||| Sbjct: 31 cctccgggacttcccctccttcatctgcacc 1
>emb|AJ438323.1|TAE438323 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2ni2e Length = 313 Score = 293 bits (148), Expect = 3e-76 Identities = 240/271 (88%) Strand = Plus / Minus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 |||||||||||||||||| |||||||||||| | |||||||||| ||| ||||| ||||| Sbjct: 271 gccgccggtgacgtgcgtggtggcggacaacgtgatgagcttcagcgtggacgcggcggc 212 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| || | |||||||||| ||||||| ||||||||||||||||||||| | ||||| Sbjct: 211 ggagatcagggtgccgtgcgtcctcttctggaccgccagcgcctgcggctacattggcta 152 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 151 ccgcaacttccggttcctcatgcaagagggcatcgctcccctcaaagatgaagcgcagct 92 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 || ||||||||||| |||||||||||| | | ||||| |||||||||| ||||||||| Sbjct: 91 gagcaacgggtacctggacacgccggtggcgcaggctcccgggatgagccggcacatgcg 32 Query: 440 cctccgtgacttcccctccttcatctgcacc 470 |||||| |||||||| ||||||||||||||| Sbjct: 31 cctccgggacttcccttccttcatctgcacc 1
>emb|AJ438322.1|TAE438322 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2ni2c Length = 313 Score = 293 bits (148), Expect = 3e-76 Identities = 240/271 (88%) Strand = Plus / Minus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 |||||||||||||||||| |||||||||||| | |||||||||| ||| ||||| ||||| Sbjct: 271 gccgccggtgacgtgcgtggtggcggacaacgtgatgagcttcagcgtggacgcggcggc 212 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| || | |||||||||| ||||||| ||||||||||||||||||||| | ||||| Sbjct: 211 ggagatcagggtgccgtgcgtcctcttctggaccgccagcgcctgcggctacattggcta 152 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 151 ccgcaacttccggttcctcatgcaagagggcatcgctcccctcaaagatgaagcgcagct 92 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 || ||||||||||| |||||||||||| | | ||||| |||||||||| ||||||||| Sbjct: 91 gagcaacgggtacctggacacgccggtggcgcaggctcccgggatgagccggcacatgcg 32 Query: 440 cctccgtgacttcccctccttcatctgcacc 470 |||||| |||||||| ||||||||||||||| Sbjct: 31 cctccgggacttcccttccttcatctgcacc 1
>emb|AJ438321.1|TAE438321 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2ni2b Length = 313 Score = 293 bits (148), Expect = 3e-76 Identities = 240/271 (88%) Strand = Plus / Minus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 |||||||||||||||||| |||||||||||| | |||||||||| ||| ||||| ||||| Sbjct: 271 gccgccggtgacgtgcgtggtggcggacaacgtgatgagcttcagcgtggacgcggcggc 212 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| || | |||||||||| ||||||| ||||||||||||||||||||| | ||||| Sbjct: 211 ggagatcagggtgccgtgcgtcctcttctggaccgccagcgcctgcggctacattggcta 152 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 151 ccgcaacttccggttcctcatgcaagagggcatcgctcccctcaaagatgaagcgcagct 92 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 || ||||||||||| |||||||||||| | | ||||| |||||||||| ||||||||| Sbjct: 91 gagcaacgggtacctggacacgccggtggcgcaggctcccgggatgagccggcacatgcg 32 Query: 440 cctccgtgacttcccctccttcatctgcacc 470 |||||| |||||||| ||||||||||||||| Sbjct: 31 cctccgggacttcccttccttcatctgcacc 1
>emb|AJ438320.1|TAE438320 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2ni2a Length = 313 Score = 293 bits (148), Expect = 3e-76 Identities = 240/271 (88%) Strand = Plus / Minus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 |||||||||||||||||| |||||||||||| | |||||||||| ||| ||||| ||||| Sbjct: 271 gccgccggtgacgtgcgtggtggcggacaacgtgatgagcttcagcgtggacgcggcggc 212 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| || | |||||||||| ||||||| ||||||||||||||||||||| | ||||| Sbjct: 211 ggagatcagggtgccgtgcgtcctcttctggaccgccagcgcctgcggctacattggcta 152 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 151 ccgcaacttccggttcctcatgcaagagggcatcgctcccctcaaagatgaagcgcagct 92 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 || ||||||||||| |||||||||||| | | ||||| |||||||||| ||||||||| Sbjct: 91 gagcaacgggtacctggacacgccggtggcgcaggctcccgggatgagccggcacatgcg 32 Query: 440 cctccgtgacttcccctccttcatctgcacc 470 |||||| |||||||| ||||||||||||||| Sbjct: 31 cctccgggacttcccttccttcatctgcacc 1
>emb|AJ438326.1|TAE438326 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i4a Length = 460 Score = 178 bits (90), Expect = 1e-41 Identities = 230/277 (83%) Strand = Plus / Plus Query: 193 ctgggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacg 252 |||||| |||||||||||||||||| || ||||||| ||||||||||||| | || |||| Sbjct: 48 ctgggacgccgccggtgacgtgcgtcgtcgcggacagcatcatgagcttcgcggtggacg 107 Query: 253 ccgcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacg 312 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 108 ccgcggcggagctcggcgtgccgtgcgcgctcttctggaccgccagcgcctgcggttaca 167 Query: 313 tgggctaccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaag 372 |||||||| ||||||| |||||||| | || | ||| | |||| |||| || | ||| Sbjct: 168 tgggctactacaacttccggttcctcctagaccatggccttactcctctcaaaggtaaag 227 Query: 373 cgcagctgacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagc 432 ||| |||||||| || ||| | | |||||||||| | |||||| ||||||| | || Sbjct: 228 agcaactgacgaatggctacttgggcacgccggtgacaaatgctctcgggatgaccaggc 287 Query: 433 acatgcgcctccgtgacttcccctccttcatctgcac 469 | ||||| ||||| |||||||| ||||||||| |||| Sbjct: 288 agatgcgtctccgggacttcccgtccttcatccgcac 324
>ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 163 bits (82), Expect = 6e-37 Identities = 225/273 (82%) Strand = Plus / Plus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 ||||||||| || ||||| ||||| ||| || ||||| |||||| | | ||||||||||| Sbjct: 491 gccgccggtcacctgcgtcgtggccgaccacctcatgggcttcagcctcgacgccgcggc 550 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct: 551 ggagctcggcgtgccgtgcgcgctcttctggacggccagcgcctgcggctacatgggcta 610 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| | | ||||| || | ||||||| |||||||| || |||| |||||| Sbjct: 611 ccgcaacttccgcctgctcatcgacatgggcatcattcccctcaaaggggaagagcagct 670 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 ||||||||||| | | |||| | ||||| | || || ||||||||| |||||||||| Sbjct: 671 gacgaacgggttcatggacatggcggtggactgggcgccggggatgagcaagcacatgcg 730 Query: 440 cctccgtgacttcccctccttcatctgcaccac 472 ||| ||||||||| ||||| || ||||||| Sbjct: 731 gctcaaggacttccccaccttcctccgcaccac 763 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 319 tcccggggttccgcttcgccaccatcccggacggcctgccgccgtccgacgccgacgcca 378 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | ||||||||| |||| || |||||||||| ||||||||||||||||||||||||| || Sbjct: 379 cgcaggacccgccgtcgctcagctactccaccatgaccacctgcctcccccacttcagga 438 Query: 166 agctgctc 173 |||||||| Sbjct: 439 agctgctc 446
>dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A04, full insert sequence Length = 1764 Score = 163 bits (82), Expect = 6e-37 Identities = 225/273 (82%) Strand = Plus / Plus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 ||||||||| || ||||| ||||| ||| || ||||| |||||| | | ||||||||||| Sbjct: 491 gccgccggtcacctgcgtcgtggccgaccacctcatgggcttcagcctcgacgccgcggc 550 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct: 551 ggagctcggcgtgccgtgcgcgctcttctggacggccagcgcctgcggctacatgggcta 610 Query: 320 ccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcgcagct 379 |||||||||| | | ||||| || | ||||||| |||||||| || |||| |||||| Sbjct: 611 ccgcaacttccgcctgctcatcgacatgggcatcattcccctcaaaggggaagagcagct 670 Query: 380 gacgaacgggtacctcgacacgccggtgcccgatgctcctgggatgagccagcacatgcg 439 ||||||||||| | | |||| | ||||| | || || ||||||||| |||||||||| Sbjct: 671 gacgaacgggttcatggacatggcggtggactgggcgccggggatgagcaagcacatgcg 730 Query: 440 cctccgtgacttcccctccttcatctgcaccac 472 ||| ||||||||| ||||| || ||||||| Sbjct: 731 gctcaaggacttccccaccttcctccgcaccac 763 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 319 tcccggggttccgcttcgccaccatcccggacggcctgccgccgtccgacgccgacgcca 378 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | ||||||||| |||| || |||||||||| ||||||||||||||||||||||||| || Sbjct: 379 cgcaggacccgccgtcgctcagctactccaccatgaccacctgcctcccccacttcagga 438 Query: 166 agctgctc 173 |||||||| Sbjct: 439 agctgctc 446
>ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 40 ccggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcag 99 |||| |||||||| |||||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 182 ccggggtcccggggttccgcttcgccaccatccccgacggcctcccgccgtccgacgccg 241 Query: 100 acgcatcacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccact 159 |||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 242 acgccacgcaggacccggcgtcgatctgctactccaccatgaccacctgcctcccgcact 301 Query: 160 tcaagaagctgctc 173 ||| |||||||||| Sbjct: 302 tcacgaagctgctc 315 Score = 151 bits (76), Expect = 2e-33 Identities = 174/207 (84%) Strand = Plus / Plus Query: 195 gggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgcc 254 ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||| Sbjct: 343 gggatcccgcccgtgacgtgcgtcgtggcggacggcgtcatgagcttcgccgtcgacgcc 402 Query: 255 gcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtg 314 || |||| ||||||||||||||||||| |||| || |||||||||||||||||| || Sbjct: 403 gccaaggagctcggcgtgccgtgcgcgctgttctggacggccagcgcctgcggctacatg 462 Query: 315 ggctaccgcaacttcaggttcctcatggataagggcatcgctcccctcanagatgaagcg 374 ||||||||| || | ||||| || |||| ||||| || | || |||| |||||||| | Sbjct: 463 ggctaccgccaccaccggttcttcctggacgagggcctctcgcctctcaaagatgaagag 522 Query: 375 cagctgacgaacgggtacctcgacacg 401 |||||||||||||||| ||| |||||| Sbjct: 523 cagctgacgaacgggttcctggacacg 549
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 40 ccggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcag 99 |||| |||||||| |||||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 1158 ccggggtcccggggttccgcttcgccaccatccccgacggcctcccgccgtccgacgccg 1099 Query: 100 acgcatcacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccact 159 |||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 1098 acgccacgcaggacccggcgtcgatctgctactccaccatgaccacctgcctcccgcact 1039 Query: 160 tcaagaagctgctc 173 ||| |||||||||| Sbjct: 1038 tcacgaagctgctc 1025 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 195 gggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgcc 254 ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||| Sbjct: 997 gggatcccgcccgtgacgtgcgtcgtggcggacggcgtcatgagcttcgccgtcgacgcc 938 Query: 255 gcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtg 314 || |||| ||||||||||||||||||| |||| || |||||||||||||||||| || Sbjct: 937 gccaaggagctcggcgtgccgtgcgcgctgttctggacggccagcgcctgcggctacatg 878 Query: 315 ggctaccgc 323 ||||||||| Sbjct: 877 ggctaccgc 869 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 365 agatgaagcgcagctgacgaacgggtacctcgaca 399 |||||||| ||||||||||||||||| ||| |||| Sbjct: 696 agatgaagagcagctgacgaacgggttcctggaca 662
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 40 ccggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcag 99 |||| |||||||| |||||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 22234813 ccggggtcccggggttccgcttcgccaccatccccgacggcctcccgccgtccgacgccg 22234872 Query: 100 acgcatcacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccact 159 |||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 22234873 acgccacgcaggacccggcgtcgatctgctactccaccatgaccacctgcctcccgcact 22234932 Query: 160 tcaagaagctgctc 173 ||| |||||||||| Sbjct: 22234933 tcacgaagctgctc 22234946 Score = 139 bits (70), Expect = 9e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 ||||||||| || ||||| ||||| ||| || ||||| |||||| | | ||||||||||| Sbjct: 22249458 gccgccggtcacctgcgtcgtggccgaccacctcatgggcttcagcctcgacgccgcggc 22249517 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct: 22249518 ggagctcggcgtgccgtgcgcgctcttctggacggccagcgcctgcggctacatgggcta 22249577 Query: 320 ccgcaacttc 329 |||||||||| Sbjct: 22249578 ccgcaacttc 22249587 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 22249286 tcccggggttccgcttcgccaccatcccggacggcctgccgccgtccgacgccgacgcca 22249345 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | ||||||||| |||| || |||||||||| ||||||||||||||||||||||||| || Sbjct: 22249346 cgcaggacccgccgtcgctcagctactccaccatgaccacctgcctcccccacttcagga 22249405 Query: 166 agctgctc 173 |||||||| Sbjct: 22249406 agctgctc 22249413 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 195 gggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgcc 254 ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||| Sbjct: 22234974 gggatcccgcccgtgacgtgcgtcgtggcggacggcgtcatgagcttcgccgtcgacgcc 22235033 Query: 255 gcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtg 314 || |||| ||||||||||||||||||| |||| || |||||||||||||||||| || Sbjct: 22235034 gccaaggagctcggcgtgccgtgcgcgctgttctggacggccagcgcctgcggctacatg 22235093 Query: 315 ggctaccgc 323 ||||||||| Sbjct: 22235094 ggctaccgc 22235102 Score = 103 bits (52), Expect = 5e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 22222314 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 22222373 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 22222374 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 22222433 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 31824740 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 31824788 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 374 gcagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||||||||| ||| |||||||||||| Sbjct: 22222714 gcagctgacgaacgggttcctggacacgccggtg 22222747 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 27750459 ccaccatgactacctgcctcccctacttcaggaagctgctc 27750499 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 365 agatgaagcgcagctgacgaacgggtacctcgacacg 401 |||||||| ||||||||||||||||| ||| |||||| Sbjct: 22235275 agatgaagagcagctgacgaacgggttcctggacacg 22235311 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 249 gacgccgcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggc 308 |||||||||| ||| ||||||||||||||||||| | | || ||||||||||||||| Sbjct: 22222517 gacgccgcggaggatctcggcgtgccgtgcgcgctgctgtggacggccagcgcctgcggc 22222576 Query: 309 t 309 | Sbjct: 22222577 t 22222577 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 12247005 tcccggggttccacttcgccaccatcccggacgg 12247038 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 31825239 cagctgacgaatggataccttgacacgccggtg 31825271
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Plus Query: 40 ccggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcag 99 |||| |||||||| |||||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 130657 ccggggtcccggggttccgcttcgccaccatccccgacggcctcccgccgtccgacgccg 130716 Query: 100 acgcatcacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccact 159 |||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 130717 acgccacgcaggacccggcgtcgatctgctactccaccatgaccacctgcctcccgcact 130776 Query: 160 tcaagaagctgctc 173 ||| |||||||||| Sbjct: 130777 tcacgaagctgctc 130790 Score = 139 bits (70), Expect = 9e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 ||||||||| || ||||| ||||| ||| || ||||| |||||| | | ||||||||||| Sbjct: 145302 gccgccggtcacctgcgtcgtggccgaccacctcatgggcttcagcctcgacgccgcggc 145361 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct: 145362 ggagctcggcgtgccgtgcgcgctcttctggacggccagcgcctgcggctacatgggcta 145421 Query: 320 ccgcaacttc 329 |||||||||| Sbjct: 145422 ccgcaacttc 145431 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 145130 tcccggggttccgcttcgccaccatcccggacggcctgccgccgtccgacgccgacgcca 145189 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | ||||||||| |||| || |||||||||| ||||||||||||||||||||||||| || Sbjct: 145190 cgcaggacccgccgtcgctcagctactccaccatgaccacctgcctcccccacttcagga 145249 Query: 166 agctgctc 173 |||||||| Sbjct: 145250 agctgctc 145257 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 195 gggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgcc 254 ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||| Sbjct: 130818 gggatcccgcccgtgacgtgcgtcgtggcggacggcgtcatgagcttcgccgtcgacgcc 130877 Query: 255 gcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtg 314 || |||| ||||||||||||||||||| |||| || |||||||||||||||||| || Sbjct: 130878 gccaaggagctcggcgtgccgtgcgcgctgttctggacggccagcgcctgcggctacatg 130937 Query: 315 ggctaccgc 323 ||||||||| Sbjct: 130938 ggctaccgc 130946 Score = 103 bits (52), Expect = 5e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 118158 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 118217 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 118218 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 118277 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 374 gcagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||||||||| ||| |||||||||||| Sbjct: 118558 gcagctgacgaacgggttcctggacacgccggtg 118591 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 365 agatgaagcgcagctgacgaacgggtacctcgacacg 401 |||||||| ||||||||||||||||| ||| |||||| Sbjct: 131119 agatgaagagcagctgacgaacgggttcctggacacg 131155 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 249 gacgccgcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggc 308 |||||||||| ||| ||||||||||||||||||| | | || ||||||||||||||| Sbjct: 118361 gacgccgcggaggatctcggcgtgccgtgcgcgctgctgtggacggccagcgcctgcggc 118420 Query: 309 t 309 | Sbjct: 118421 t 118421
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full insert sequence Length = 1505 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 40 ccggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcag 99 |||| |||||||| |||||||||||||||||||||||||| || || ||||| ||||| | Sbjct: 1157 ccggggtcccggggttccgcttcgccaccatccccgacggcctcccgccgtccgacgccg 1098 Query: 100 acgcatcacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccact 159 |||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 1097 acgccacgcaggacccggcgtcgatctgctactccaccatgaccacctgcctcccgcact 1038 Query: 160 tcaagaagctgctc 173 ||| |||||||||| Sbjct: 1037 tcacgaagctgctc 1024 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 195 gggatgccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgcc 254 ||||| ||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||| Sbjct: 996 gggatcccgcccgtgacgtgcgtcgtggcggacggcgtcatgagcttcgccgtcgacgcc 937 Query: 255 gcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtg 314 || |||| ||||||||||||||||||| |||| || |||||||||||||||||| || Sbjct: 936 gccaaggagctcggcgtgccgtgcgcgctgttctggacggccagcgcctgcggctacatg 877 Query: 315 ggctaccgc 323 ||||||||| Sbjct: 876 ggctaccgc 868 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 365 agatgaagcgcagctgacgaacgggtacctcgacacg 401 |||||||| ||||||||||||||||| ||| |||||| Sbjct: 695 agatgaagagcagctgacgaacgggttcctggacacg 659
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 139 bits (70), Expect = 9e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 200 gccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggc 259 ||||||||| || ||||| ||||| ||| || ||||| |||||| | | ||||||||||| Sbjct: 8102 gccgccggtcacctgcgtcgtggccgaccacctcatgggcttcagcctcgacgccgcggc 8161 Query: 260 ggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggcta 319 |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| Sbjct: 8162 ggagctcggcgtgccgtgcgcgctcttctggacggccagcgcctgcggctacatgggcta 8221 Query: 320 ccgcaacttc 329 |||||||||| Sbjct: 8222 ccgcaacttc 8231 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 7930 tcccggggttccgcttcgccaccatcccggacggcctgccgccgtccgacgccgacgcca 7989 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | ||||||||| |||| || |||||||||| ||||||||||||||||||||||||| || Sbjct: 7990 cgcaggacccgccgtcgctcagctactccaccatgaccacctgcctcccccacttcagga 8049 Query: 166 agctgctc 173 |||||||| Sbjct: 8050 agctgctc 8057
>ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 103 bits (52), Expect = 5e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 105 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 224 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 283 Query: 106 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 165 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 284 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 343 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 249 gacgccgcggcggaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggc 308 |||||||||| ||| ||||||||||||||||||| | | || ||||||||||||||| Sbjct: 427 gacgccgcggaggatctcggcgtgccgtgcgcgctgctgtggacggccagcgcctgcggc 486 Query: 309 t 309 | Sbjct: 487 t 487 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 378 ctgacgaacgggtacctcgacacgccggtg 407 ||||||||||||| ||| |||||||||||| Sbjct: 571 ctgacgaacgggttcctggacacgccggtg 600
>ref|XM_472671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 201 ccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggcg 260 ||||| || |||||||| || || ||| || ||||||||||| |||| |||||||| | Sbjct: 355 ccgcccgtcacgtgcgtcgtcgccgacgacgtcatgagcttcgccgtcgacgccgccagg 414 Query: 261 gaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggctac 320 ||| || ||||||||||||||||||||| || ||||||| |||||||||| |||||||| Sbjct: 415 gagttccgcgtgccgtgcgcgctcttctggacggccagcgtctgcggctacatgggctac 474 Query: 321 cgc 323 ||| Sbjct: 475 cgc 477 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||| ||||||| |||||||||||| ||||||| ||||| || || ||||| ||||| || Sbjct: 189 cggcctcccggggttccgcttcgccgccatcccggacggcctcccgccgtccgacgccga 248 Query: 101 cgc 103 ||| Sbjct: 249 cgc 251
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 201 ccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggcg 260 ||||| || |||||||| || || ||| || ||||||||||| |||| |||||||| | Sbjct: 60334 ccgcccgtcacgtgcgtcgtcgccgacgacgtcatgagcttcgccgtcgacgccgccagg 60393 Query: 261 gaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggctac 320 ||| || ||||||||||||||||||||| || ||||||| |||||||||| |||||||| Sbjct: 60394 gagttccgcgtgccgtgcgcgctcttctggacggccagcgtctgcggctacatgggctac 60453 Query: 321 cgc 323 ||| Sbjct: 60454 cgc 60456 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||| ||||||| |||||||||||| ||||||| ||||| || || ||||| ||||| || Sbjct: 60168 cggcctcccggggttccgcttcgccgccatcccggacggcctcccgccgtccgacgccga 60227 Query: 101 cgc 103 ||| Sbjct: 60228 cgc 60230
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 201 ccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggcg 260 ||||| || |||||||| || || ||| || ||||||||||| |||| |||||||| | Sbjct: 22456579 ccgcccgtcacgtgcgtcgtcgccgacgacgtcatgagcttcgccgtcgacgccgccagg 22456638 Query: 261 gaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggctac 320 ||| || ||||||||||||||||||||| || ||||||| |||||||||| |||||||| Sbjct: 22456639 gagttccgcgtgccgtgcgcgctcttctggacggccagcgtctgcggctacatgggctac 22456698 Query: 321 cgc 323 ||| Sbjct: 22456699 cgc 22456701 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 15164727 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 15164668 Query: 101 cgc 103 ||| Sbjct: 15164667 cgc 15164665 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 15152030 tctgctactccaccatgaccacctgcctcccccac 15151996 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 14735855 tctgctactccaccatgaccacctgcctcccccac 14735889 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 14723267 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 14723326 Query: 101 cgc 103 ||| Sbjct: 14723327 cgc 14723329 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||| ||||||| |||||||||||| ||||||| ||||| || || ||||| ||||| || Sbjct: 22456413 cggcctcccggggttccgcttcgccgccatcccggacggcctcccgccgtccgacgccga 22456472 Query: 101 cgc 103 ||| Sbjct: 22456473 cgc 22456475 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 15013088 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 15013129 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 14365474 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 14365433 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| ||||||||||||| Sbjct: 14735775 cgtccccgggttccgcttcgccgccatccccgacgg 14735810 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| |||||||||||| Sbjct: 15152110 cgtccccgggttccgcttcgccggcatccccgacgg 15152075
>dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132G13, full insert sequence Length = 1759 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 201 ccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggcg 260 ||||| || |||||||| || || ||| || ||||||||||| |||| |||||||| | Sbjct: 437 ccgcccgtcacgtgcgtcgtcgccgacgacgtcatgagcttcgccgtcgacgccgccagg 496 Query: 261 gaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggctac 320 ||| || ||||||||||||||||||||| || ||||||| |||||||||| |||||||| Sbjct: 497 gagttccgcgtgccgtgcgcgctcttctggacggccagcgtctgcggctacatgggctac 556 Query: 321 cgc 323 ||| Sbjct: 557 cgc 559 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||| ||||||| |||||||||||| ||||||| ||||| || || ||||| ||||| || Sbjct: 271 cggcctcccggggttccgcttcgccgccatcccggacggcctcccgccgtccgacgccga 330 Query: 101 cgc 103 ||| Sbjct: 331 cgc 333
>dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F02, full insert sequence Length = 1647 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 201 ccgccggtgacgtgcgttgtggcggacaacatcatgagcttcaccgttgacgccgcggcg 260 ||||| || |||||||| || || ||| || ||||||||||| |||| |||||||| | Sbjct: 440 ccgcccgtcacgtgcgtcgtcgccgacgacgtcatgagcttcgccgtcgacgccgccagg 499 Query: 261 gaggtcggcgtgccgtgcgcgctcttctttaccgccagcgcctgcggctacgtgggctac 320 ||| || ||||||||||||||||||||| || ||||||| |||||||||| |||||||| Sbjct: 500 gagttccgcgtgccgtgcgcgctcttctggacggccagcgtctgcggctacatgggctac 559 Query: 321 cgc 323 ||| Sbjct: 560 cgc 562 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||| ||||||| |||||||||||| ||||||| ||||| || || ||||| ||||| || Sbjct: 274 cggcctcccggggttccgcttcgccgccatcccggacggcctcccgccgtccgacgccga 333 Query: 101 cgc 103 ||| Sbjct: 334 cgc 336
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 269 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 317 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 602 cagctgacgaatggataccttgacacgccggtg 634
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 272 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 320 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 605 cagctgacgaatggataccttgacacgccggtg 637
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 120538 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 120586 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 121037 cagctgacgaatggataccttgacacgccggtg 121069
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 269 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 317 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 602 cagctgacgaatggataccttgacacgccggtg 634
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 48 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 96 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 272 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 320 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 cagctgacgaacgggtacctcgacacgccggtg 407 ||||||||||| || ||||| |||||||||||| Sbjct: 605 cagctgacgaatggataccttgacacgccggtg 637
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 275 tctgctactccaccatgaccacctgcctcccccac 309 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| |||||||||||| Sbjct: 195 cgtccccgggttccgcttcgccggcatccccgacgg 230
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 177 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 236 Query: 101 cgc 103 ||| Sbjct: 237 cgc 239
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 150 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 209 Query: 101 cgc 103 ||| Sbjct: 210 cgc 212
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 275 tctgctactccaccatgaccacctgcctcccccac 309 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| ||||||||||||| Sbjct: 195 cgtccccgggttccgcttcgccgccatccccgacgg 230
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 57622 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 57563 Query: 101 cgc 103 ||| Sbjct: 57562 cgc 57560 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 44925 tctgctactccaccatgaccacctgcctcccccac 44891 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| |||||||||||| Sbjct: 45005 cgtccccgggttccgcttcgccggcatccccgacgg 44970
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 124 tctgctactccacaatgaccacctgcctcccccac 158 ||||||||||||| ||||||||||||||||||||| Sbjct: 75509 tctgctactccaccatgaccacctgcctcccccac 75543 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 100 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 62921 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 62980 Query: 101 cgc 103 ||| Sbjct: 62981 cgc 62983 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 44 cgtcccgggcttccgcttcgccaccatccccgacgg 79 |||||| || |||||||||||| ||||||||||||| Sbjct: 75429 cgtccccgggttccgcttcgccgccatccccgacgg 75464
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 183 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 224
>ref|XM_471795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 183 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 224 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 ccgccagcgcctgcggctacgtggg 316 |||||||||||||||||| |||||| Sbjct: 407 ccgccagcgcctgcggcttcgtggg 431
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 29549 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 29590
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 98393 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 98352
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full insert sequence Length = 1457 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 41 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 82 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1169 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 1128
>ref|NM_196193.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.23), mRNA Length = 708 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 392 ccaccatgactacctgcctcccccactttaggaagctgctc 432 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 335 tcccggggttcctcttcgccaccatcccggacgg 368
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 144518 ccaccatgactacctgcctcccccactttaggaagctgctc 144558 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 144461 tcccggggttcctcttcgccaccatcccggacgg 144494
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 87862 ccaccatgactacctgcctcccccactttaggaagctgctc 87822 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 87919 tcccggggttcctcttcgccaccatcccggacgg 87886
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 11826457 ccaccatgactacctgcctcccccactttaggaagctgctc 11826497 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 11826400 tcccggggttcctcttcgccaccatcccggacgg 11826433
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 35792 ccaccatgactacctgcctcccctacttcaggaagctgctc 35832
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 136325 ccaccatgactacctgcctcccctacttcaggaagctgctc 136365
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 133 ccacaatgaccacctgcctcccccacttcaagaagctgctc 173 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 11833797 ccaccatgactacctgcctcccccactttaggaagctgctc 11833837 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 11833740 tcccggggttcctcttcgccaccatcccggacgg 11833773
>emb|AJ438319.1|TAE438319 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2i2e Length = 319 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 agctgacgaacgggtacctcgacacgccggtg 407 ||||||||||||| ||||| |||||||||||| Sbjct: 92 agctgacgaacggataccttgacacgccggtg 61
>emb|AJ438317.1|TAE438317 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2i2b Length = 260 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 agctgacgaacgggtacctcgacacgccggtg 407 ||||||||||||| ||||| |||||||||||| Sbjct: 92 agctgacgaacggataccttgacacgccggtg 61
>gb|AE007207.1| Sinorhizobium meliloti 1021 plasmid pSymA section 13 of 121 of the complete plasmid sequence Length = 10596 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 tcaagaagctgctccaggagctc 182 ||||||||||||||||||||||| Sbjct: 6900 tcaagaagctgctccaggagctc 6922
>ref|XM_465200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 563 tcccggggttccacttcgccaccatcccggacgg 596
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 70466 tcccggggttccacttcgccaccatcccggacgg 70499
>dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1233_A01 Length = 98378 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 46 tcccgggcttccgcttcgccaccatccccgacgg 79 ||||||| |||| ||||||||||||||| ||||| Sbjct: 9030 tcccggggttccacttcgccaccatcccggacgg 9063
>ref|XM_516515.1| PREDICTED: Pan troglodytes similar to polybromo-1D (LOC460430), mRNA Length = 4779 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 160 cttcaagaagctgctccagga 140
>gb|AE017133.1| Yersinia pestis biovar Medievalis str. 91001 section 7 of 16 of the complete genome Length = 290874 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 74159 ttaccgccagcgcctgcggct 74179
>ref|XM_580991.2| PREDICTED: Bos taurus similar to polybromo 1 isoform 2 (LOC504816), mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 346 cttcaagaagctgctccagga 326
>gb|BC116450.1| Homo sapiens cDNA clone IMAGE:7962011, containing frame-shift errors Length = 4989 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 592 cttcaagaagctgctccagga 572
>ref|XM_957523.1| Neurospora crassa OR74A DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) (NCU06976.1) partial mRNA Length = 13104 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 aagaagctgctccaggagctcaacg 186 |||||||||||||||| |||||||| Sbjct: 11275 aagaagctgctccaggcgctcaacg 11299
>ref|XM_327261.1| Neurospora crassa OR74A DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) (NCU06976.1) partial mRNA Length = 13104 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 aagaagctgctccaggagctcaacg 186 |||||||||||||||| |||||||| Sbjct: 11275 aagaagctgctccaggcgctcaacg 11299
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 2656397 ttaccgccagcgcctgcggct 2656377
>ref|NM_018165.3| Homo sapiens polybromo 1 (PB1), transcript variant 1, mRNA Length = 7508 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>ref|XM_980312.1| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980453.1| PREDICTED: Mus musculus polybromo 1, transcript variant 5 (Pb1), mRNA Length = 7654 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980353.1| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA Length = 7750 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980420.1| PREDICTED: Mus musculus polybromo 1, transcript variant 4 (Pb1), mRNA Length = 7750 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980516.1| PREDICTED: Mus musculus polybromo 1, transcript variant 7 (Pb1), mRNA Length = 7810 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980691.1| PREDICTED: Mus musculus polybromo 1, transcript variant 12 (Pb1), mRNA Length = 7975 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980648.1| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1), mRNA Length = 8071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980547.1| PREDICTED: Mus musculus polybromo 1, transcript variant 8 (Pb1), mRNA Length = 8020 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980611.1| PREDICTED: Mus musculus polybromo 1, transcript variant 10 (Pb1), mRNA Length = 7909 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_980578.1| PREDICTED: Mus musculus polybromo 1, transcript variant 9 (Pb1), mRNA Length = 8069 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_980484.1| PREDICTED: Mus musculus polybromo 1, transcript variant 6 (Pb1), mRNA Length = 8116 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898473.2| PREDICTED: Mus musculus polybromo 1, transcript variant 3 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982426.1| PREDICTED: Mus musculus polybromo 1, transcript variant 18 (Pb1), mRNA Length = 7655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982332.1| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982397.1| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982539.1| PREDICTED: Mus musculus polybromo 1, transcript variant 19 (Pb1), mRNA Length = 7811 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982679.1| PREDICTED: Mus musculus polybromo 1, transcript variant 20 (Pb1), mRNA Length = 7976 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898533.2| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1), mRNA Length = 8021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898551.2| PREDICTED: Mus musculus polybromo 1, transcript variant 14 (Pb1), mRNA Length = 7910 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_898555.2| PREDICTED: Mus musculus polybromo 1, transcript variant 15 (Pb1), mRNA Length = 8070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_889384.2| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA Length = 8072 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_619217.3| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA Length = 8117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921805.2| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983908.1| PREDICTED: Mus musculus polybromo 1, transcript variant 33 (Pb1), mRNA Length = 7655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983789.1| PREDICTED: Mus musculus polybromo 1, transcript variant 31 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983870.1| PREDICTED: Mus musculus polybromo 1, transcript variant 32 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983981.1| PREDICTED: Mus musculus polybromo 1, transcript variant 34 (Pb1), mRNA Length = 7811 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_984143.1| PREDICTED: Mus musculus polybromo 1, transcript variant 35 (Pb1), mRNA Length = 7976 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921875.2| PREDICTED: Mus musculus polybromo 1, transcript variant 26 (Pb1), mRNA Length = 8021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921896.2| PREDICTED: Mus musculus polybromo 1, transcript variant 29 (Pb1), mRNA Length = 7910 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_921905.2| PREDICTED: Mus musculus polybromo 1, transcript variant 30 (Pb1), mRNA Length = 8070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_910948.2| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1), mRNA Length = 8072 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921867.2| PREDICTED: Mus musculus polybromo 1, transcript variant 25 (Pb1), mRNA Length = 8117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_853988.1| PREDICTED: Canis familiaris similar to polybromo 1 isoform 4, transcript variant 5 (LOC476593), mRNA Length = 6507 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 890 cttcaagaagctgctccagga 870
>ref|XM_844456.1| PREDICTED: Canis familiaris similar to polybromo 1 isoform 4, transcript variant 3 (LOC476593), mRNA Length = 6370 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 753 cttcaagaagctgctccagga 733
>gb|AF225872.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF225871.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4766 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF225870.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4885 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF177387.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>ref|NM_018313.3| Homo sapiens polybromo 1 (PB1), transcript variant 2, mRNA Length = 7545 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 674 cttcaagaagctgctccagga 654
>ref|NM_181042.2| Homo sapiens polybromo 1 (PB1), transcript variant 4, mRNA Length = 7448 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 2228883 ttaccgccagcgcctgcggct 2228863
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 2080761 ttaccgccagcgcctgcggct 2080741
>gb|BC115011.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131579 IMAGE:7962010), complete cds Length = 4996 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 593 cttcaagaagctgctccagga 573
>gb|BC115009.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131576 IMAGE:7962003), complete cds Length = 4402 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 592 cttcaagaagctgctccagga 572
>emb|AL138966.19| Human DNA sequence from clone RP11-380N8 on chromosome 13 Contains the RNF6 gene for ring finger protein (C3H2C3 type) 6, a protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)(inhibitor of protein kinase PKR) (PRKRIR) pseudogene, a TcD37 homolog (HTCD37) pseudogene, a pseudogene similar to part of ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 (ATPase II aminophospholipid translocase) (ATP8A1)(ATPIA, ATPP2, ATPASEII) and 2 CpG islands, complete sequence Length = 171160 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 407 gcccgatgctcctgggatgagccagcaca 435 |||| ||||||||||||||| |||||||| Sbjct: 124351 gccccatgctcctgggatgatccagcaca 124379
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence Length = 217029 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 199815 cttcaagaagctgctccagga 199835
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 1938881 ttaccgccagcgcctgcggct 1938901
>emb|AL031866.1|YP102KB Yersinia pestis 102 kbases unstable region: from 1 to 119443 Length = 119443 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 89086 ttaccgccagcgcctgcggct 89066
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 cacatgcgcctccgtgacttc 452 ||||||||||||||||||||| Sbjct: 84755 cacatgcgcctccgtgacttc 84775
>emb|AJ414150.1| Yersinia pestis strain CO92 complete genome; segment 10/20 Length = 335050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 229401 ttaccgccagcgcctgcggct 229421
>dbj|AK056541.1| Homo sapiens cDNA FLJ31979 fis, clone NT2RP7008441, highly similar to Polybromo 1 protein Length = 3256 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 406 cttcaagaagctgctccagga 386
>gb|BC023452.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:5029043), containing frame-shift errors Length = 1436 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 853 cttcaagaagctgctccagga 833
>gb|BC029037.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:4946106), containing frame-shift errors Length = 2848 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 702 cttcaagaagctgctccagga 682
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence Length = 186734 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 111035 cttcaagaagctgctccagga 111055
>dbj|AK166588.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0032E15 product:POLYBROMO-1 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 3140 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 980 cttcaagaagctgctccagga 960
>dbj|AK165182.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970005H16 product:POLYBROMO-1 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 3020 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 886 cttcaagaagctgctccagga 866
>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence Length = 163771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 781 cttcaagaagctgctccagga 761
>dbj|AK030781.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730600B02 product:POLYBROMO-1 homolog [Homo sapiens], full insert sequence Length = 3015 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 833 cttcaagaagctgctccagga 813
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 tccgcttcgccaccatccccgacgg 79 ||||||||||||||||| ||||||| Sbjct: 19901883 tccgcttcgccaccatctccgacgg 19901907
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cgccgcggcggaggtcggcgt 271 ||||||||||||||||||||| Sbjct: 8002186 cgccgcggcggaggtcggcgt 8002166
>gb|AF197569.1|AF197569 Homo sapiens BAF180 (BAF180) mRNA, complete cds Length = 5070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 670 cttcaagaagctgctccagga 650
>gb|AY281068.1| Homo sapiens polybromo-1D (PB1) mRNA, complete cds Length = 5145 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 576 cttcaagaagctgctccagga 556
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0217C03 Length = 58309 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 tccgcttcgccaccatccccgacgg 79 ||||||||||||||||| ||||||| Sbjct: 8969 tccgcttcgccaccatctccgacgg 8993
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cgccgcggcggaggtcggcgt 271 ||||||||||||||||||||| Sbjct: 40383 cgccgcggcggaggtcggcgt 40363
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cgccgcggcggaggtcggcgt 271 ||||||||||||||||||||| Sbjct: 118545 cgccgcggcggaggtcggcgt 118525
>dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O03, full insert sequence Length = 1843 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 tccgcttcgccaccatccccgacgg 79 ||||||||||||||||| ||||||| Sbjct: 244 tccgcttcgccaccatctccgacgg 268
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 cttcaagaagctgctccagga 178 ||||||||||||||||||||| Sbjct: 146702 cttcaagaagctgctccagga 146682
>gb|AF091251.1|AF091251 Yersinia pestis tRNA-Asn gene, complete sequence; CP4-like integrase (int), YbtS (ybtS), YbtX (ybtX), YbtQ (ybtQ), YbtP (ybtP), AraC-like regulator YbtA (ybtA), Ybt peptide synthetase HMWP2 (irp2), Ybt peptide/polyketide synthetase HMWP1 (irp1), YbtU (ybtU), YbtT (ybtT), salicyl-AMP ligase YbtE (ybtE), Ybt/pesticin receptor Psn (psn), and IS100 transposase genes, complete cds; and unknown genes Length = 35806 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 12387 ttaccgccagcgcctgcggct 12367
>gb|U59450.1|SVU59450 Streptomyces viridochromogenes rRNA (adenine-N6-)-methyltransferase (ermSV) gene, complete cds Length = 1300 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ggccccggagccctgaccggc 44 ||||||||||||||||||||| Sbjct: 250 ggccccggagccctgaccggc 270
>gb|L31504.1|NEURO1DHC Neurospora crassa cytoplasmic dynein heavy chain (ro-1) gene, complete cds Length = 14313 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 aagaagctgctccaggagctcaacg 186 |||||||||||||||| |||||||| Sbjct: 11513 aagaagctgctccaggcgctcaacg 11537
>gb|L18881.1|YEPIRP2H Yersinia enterocolitica HMWP2 (irp2) gene, complete cds Length = 6468 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 ttaccgccagcgcctgcggct 309 ||||||||||||||||||||| Sbjct: 1975 ttaccgccagcgcctgcggct 1955
>dbj|AB070753.1| Vigna angularis AdGt-10 mRNA for glucosyltransferase-10, complete cds Length = 1652 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 54 ttccgcttcgccaccatccccgacgggct 82 |||||||||| ||||||||||||||||| Sbjct: 220 ttccgcttcgaaaccatccccgacgggct 248
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgcctgggatgccgccggtgacgt 213 ||||||| |||||||||||||||| Sbjct: 1698 cgcctggtatgccgccggtgacgt 1675
>ref|XM_322125.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 caagaagctgctccaggagc 180 |||||||||||||||||||| Sbjct: 1887 caagaagctgctccaggagc 1906
>ref|XM_951058.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 caagaagctgctccaggagc 180 |||||||||||||||||||| Sbjct: 1887 caagaagctgctccaggagc 1906
>gb|AC105141.7| Homo sapiens chromosome 8, clone CTD-3110J21, complete sequence Length = 137952 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 aacttcaggttcctcatggataag 347 |||||||||||| ||||||||||| Sbjct: 80039 aacttcaggttcttcatggataag 80016
>gb|AC105206.8| Homo sapiens chromosome 8, clone CTD-2530N21, complete sequence Length = 218931 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 aacttcaggttcctcatggataag 347 |||||||||||| ||||||||||| Sbjct: 72620 aacttcaggttcttcatggataag 72597
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgcctgggatgccgccggtgacgt 213 ||||||| |||||||||||||||| Sbjct: 226178 cgcctggtatgccgccggtgacgt 226155
>gb|AC006360.2|AC006360 Homo sapiens PAC clone RP5-1140N14 from 14q24.3, complete sequence Length = 138271 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cttcccctccttcatctgca 468 |||||||||||||||||||| Sbjct: 38611 cttcccctccttcatctgca 38592
>ref|XM_341602.2| PREDICTED: Rattus norvegicus similar to ARF-GAP, RHO-GAP, ankyrin repeat and pleckstrin homology domains-containing protein 3; dual-specificity Rho- and Arf-GTPase activating protein 1 (predicted) (LOC361314), mRNA Length = 4275 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 agctgctccaggagctcaac 185 |||||||||||||||||||| Sbjct: 4091 agctgctccaggagctcaac 4110
>dbj|AK108676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A03, full insert sequence Length = 1640 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgcctgggatgccgccggtgacgt 213 ||||||| |||||||||||||||| Sbjct: 745 cgcctggtatgccgccggtgacgt 722
>gb|AY103893.1| Zea mays PCO128645 mRNA sequence Length = 983 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gcaacttcaggttcctcatg 341 |||||||||||||||||||| Sbjct: 353 gcaacttcaggttcctcatg 334
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgcctgggatgccgccggtgacgt 213 ||||||| |||||||||||||||| Sbjct: 108362 cgcctggtatgccgccggtgacgt 108339
>emb|X78588.1|LAIGMCE L.aethopica genomic DNA ORF with IgM crossreactive epitopes Length = 154 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgccggtgacgtgcgttgtg 221 |||||||||||||||||||| Sbjct: 105 cgccggtgacgtgcgttgtg 124 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,805,068 Number of Sequences: 3902068 Number of extensions: 2805068 Number of successful extensions: 54807 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54153 Number of HSP's gapped (non-prelim): 650 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
