ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast62b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NHG1_PSEPU (P23262) Salicylate hydroxylase (EC 1.14.13.1) (Salic... 44 3e-04
2NHG2_PSEPU (Q53552) Salicylate hydroxylase (EC 1.14.13.1) (Salic... 44 3e-04
3UBIF_ECOLI (P75728) 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoqui... 40 0.003
4ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 38 0.016
5ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor ... 36 0.060
6FIXC_ECOLI (P68644) Protein fixC 36 0.060
7FIXC_ECOL6 (P68645) Protein fixC 36 0.060
8FIXC_ECO57 (Q7AHT0) Protein fixC 36 0.060
9FIXC_SALTI (Q8Z9K9) Protein fixC 35 0.078
10FIXC_SHIFL (Q83SQ7) Protein fixC 35 0.10
11FIXC_SALTY (Q8ZRW9) Protein fixC 34 0.23
12COQ6_HUMAN (Q9Y2Z9) Ubiquinone biosynthesis monooxgenase COQ6 (E... 33 0.39
13TCMG_STRGA (P39888) Tetracenomycin polyketide synthesis hydroxyl... 33 0.51
14TFDB_COMAC (Q8KN28) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.... 33 0.51
15COQ6_MOUSE (Q8R1S0) Ubiquinone biosynthesis monooxgenase COQ6 (E... 32 0.66
16YNH2_METBA (P54805) Hypothetical 19.9 kDa protein in nifH2 5'reg... 32 0.87
17Y1520_METJA (Q58915) Hypothetical protein MJ1520 31 1.5
18COQ6_DROME (Q9VMQ5) Putative ubiquinone biosynthesis monooxgenas... 31 1.5
19Y134_METJA (Q57598) Hypothetical protein MJ0134 31 1.5
20COQ6_SCHPO (Q9Y7Z9) Probable ubiquinone biosynthesis monooxgenas... 31 1.9
21R13L4_ARATH (Q38834) Putative disease resistance RPP13-like prot... 30 2.5
22STHA_PSEFL (O05139) Soluble pyridine nucleotide transhydrogenase... 30 2.5
23CD3E_PIG (Q7YRN2) T-cell surface glycoprotein CD3 epsilon chain ... 30 2.5
24VISC_ECOLI (P25535) Protein visC (EC 1.-.-.-) 30 3.3
25DPH1_CRYNE (Q5KN81) Diphthamide biosynthesis protein 1 30 3.3
26CD3E_SHEEP (P29328) T-cell surface glycoprotein CD3 epsilon chai... 29 7.3
27TFDB_RALEJ (P27138) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.... 29 7.3
28TNR1A_HUMAN (P19438) Tumor necrosis factor receptor superfamily ... 28 9.6
29PRS27_MOUSE (Q8BJR6) Protease serine 27 precursor (EC 3.4.21.-) ... 28 9.6
30RAM1_YEAST (P22007) Protein farnesyltransferase beta subunit (EC... 28 9.6
31IF3A_SCHPO (O74760) Probable eukaryotic translation initiation f... 28 9.6
32STHA_PSESM (Q884I6) Soluble pyridine nucleotide transhydrogenase... 28 9.6
33STHA_PSEPK (Q88KY8) Soluble pyridine nucleotide transhydrogenase... 28 9.6
34STHA_PSEAE (P57112) Soluble pyridine nucleotide transhydrogenase... 28 9.6

>NHG1_PSEPU (P23262) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate|
           1-monooxygenase)
          Length = 433

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           V R   +  L   LPEG  ++  +   +++ G   ++L   DG+  R   LIG DGI S 
Sbjct: 108 VHRADFIDALVTHLPEGIAQFGKRATQVEQQGGEVQVL-FTDGTEYRCDLLIGADGIKSA 166

Query: 234 ----VARWLGLAK--PSHSGRSATRGL 296
               V    GLA   P  SG  A RG+
Sbjct: 167 LRSHVLEGQGLAPQVPRFSGTCAYRGM 193



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>NHG2_PSEPU (Q53552) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate|
           1-monooxygenase)
          Length = 435

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           V R   L  L   LPEG  ++  +   I++ GD  ++L   DG+  R   LIG DGI S 
Sbjct: 111 VHRADFLDALVKHLPEGIAQFRKRATQIEQQGDELQVL-FRDGTEYRCDLLIGRDGIKSA 169

Query: 234 VARWL------GLAKPSHSGRSATRGL 296
           +  ++         +P  SG  A RG+
Sbjct: 170 LRSYVLEGQGQDHLEPRFSGTCAYRGM 196



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>UBIF_ECOLI (P75728) 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol|
           hydroxylase (EC 1.14.13.-)
          Length = 391

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 24/67 (35%), Positives = 36/67 (53%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           V +  L Q L A  P+ T+R    ++++  H D  + L L  G  +RAK +IG DG NS 
Sbjct: 113 VLQQALWQALEAH-PKVTLRVPGSLIALHRHDD-LQELELKGGEVIRAKLVIGADGANSQ 170

Query: 234 VARWLGL 254
           V +  G+
Sbjct: 171 VRQMAGI 177



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           + R  L Q+LA  + E  I   S +V  ++ G+   ++ L +G       L+G DGI S 
Sbjct: 195 ISRMTLQQILARAVGEEIIMNESNVVDFEDDGEKVTVV-LENGQRFTGDLLVGADGIRSK 253

Query: 234 V-ARWLGLAKPSHSGRSATRGLARY 305
           V     G ++ ++SG +   G+A +
Sbjct: 254 VRTNLFGPSEATYSGYTCYTGIADF 278



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>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 663

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           + R  L Q LA  + E  I   S +V+ ++ G+   +  L DG       L+G DGI S 
Sbjct: 189 ISRMTLQQNLARAVGEDIIMNESNVVNFEDDGEKVTVT-LEDGQQYTGDLLVGADGIRSK 247

Query: 234 V-ARWLGLAKPSHSGRSATRGLARY 305
           V     G +  ++SG +   G+A +
Sbjct: 248 VRTNLFGPSDVTYSGYTCYTGIADF 272



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>FIXC_ECOLI (P68644) Protein fixC|
          Length = 428

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  + AK +I  DG+NS++A  LG+AK
Sbjct: 138 DGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAK 174



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>FIXC_ECOL6 (P68645) Protein fixC|
          Length = 428

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  + AK +I  DG+NS++A  LG+AK
Sbjct: 138 DGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAK 174



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>FIXC_ECO57 (Q7AHT0) Protein fixC|
          Length = 428

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  + AK +I  DG+NS++A  LG+AK
Sbjct: 138 DGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAK 174



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>FIXC_SALTI (Q8Z9K9) Protein fixC|
          Length = 428

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  L AK +I  DG+NS++A  LG+AK
Sbjct: 138 DGKVVGVEADGDILEAKVVILADGVNSLLAEKLGMAK 174



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>FIXC_SHIFL (Q83SQ7) Protein fixC|
          Length = 428

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  + AK ++  DG+NS++A  LG+AK
Sbjct: 138 DGKVVGVEADGDVIEAKTVLLADGVNSILAEKLGMAK 174



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>FIXC_SALTY (Q8ZRW9) Protein fixC|
          Length = 428

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +3

Query: 150 DGAKILHLADGSALRAKALIGCDGINSVVARWLGLAK 260
           DG  +   ADG  L AK +I  DG+NS++A  LG+ K
Sbjct: 138 DGKVVGVEADGDILEAKVVILADGVNSLLAEKLGMTK 174



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>COQ6_HUMAN (Q9Y2Z9) Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)|
          Length = 468

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELP----EGTIRYSSKIVSID-----EHGDGAKILH--LADGSALRAK 200
           V  DV++  L  +L       T+ Y SK +           D +  +H  L DGS  + K
Sbjct: 143 VENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTK 202

Query: 201 ALIGCDGINSVVARWLGLAKPS 266
            LIG DG NS V + +G+   S
Sbjct: 203 LLIGADGHNSGVRQAVGIQNVS 224



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>TCMG_STRGA (P39888) Tetracenomycin polyketide synthesis hydroxylase tcmG (EC|
           1.14.13.-)
          Length = 572

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 138 DEHGDGAKILHLADG--SALRAKALIGCDGINSVVARWLGLAKPSH 269
           DE G  A I+  A G  S +RA+ LI  DG+ S V   LG+ +  H
Sbjct: 169 DESGVTATIVDQATGEQSTVRARYLIAADGVRSPVRETLGITRTGH 214



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>TFDB_COMAC (Q8KN28) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20)|
           (2,4-dichlorophenol hydroxylase) (2,4-DCP hydroxylase)
          Length = 586

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +3

Query: 108 IRYSSKIVSI--DEHGDGAKIL-HLADGSA-LRAKALIGCDGINSVVARWLGLAKPSHSG 275
           +R+ ++ VS+  DE G  A +  HL D    +RAK LIG DG NS V   +GL      G
Sbjct: 141 VRFHTEFVSLKQDETGVTATVRDHLLDRQYDIRAKYLIGADGANSQVVDQVGLPMEGKMG 200

Query: 276 RSAT 287
            S +
Sbjct: 201 VSGS 204



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>COQ6_MOUSE (Q8R1S0) Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)|
          Length = 469

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIR----YSSKIVSIDEHG-----DGAKILH--LADGSALRAK 200
           V  DV++  L  +L     R    Y SK V     G     D +  +H  L DGS L+ K
Sbjct: 144 VENDVIMYALTKQLEAVADRVKVLYESKAVGYSWPGAFSMADSSPWVHITLGDGSTLQTK 203

Query: 201 ALIGCDGINSVVARWLGLAKPS 266
            LIG DG  S V +  G+   S
Sbjct: 204 LLIGADGHKSGVRQAAGIQNVS 225



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>YNH2_METBA (P54805) Hypothetical 19.9 kDa protein in nifH2 5'region (ORF186)|
          Length = 186

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +3

Query: 189 LRAKALIGCDGINSVVARWLGLAKPSHS 272
           ++AKA+IG DG NS+VA+  GLA  S S
Sbjct: 149 IKAKAIIGADGPNSLVAKSKGLALTSGS 176



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>Y1520_METJA (Q58915) Hypothetical protein MJ1520|
          Length = 387

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 138 DEHGDGAKILHLADGSALRAKALIGCDGINSVVARWLGL 254
           D++G   +I HL +   L  K ++G DG  ++  + LGL
Sbjct: 120 DKNGYKVEITHLGEKITLNPKIIVGADGAKTITGKKLGL 158



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>COQ6_DROME (Q9VMQ5) Putative ubiquinone biosynthesis monooxgenase COQ6 (EC|
           1.14.13.-)
          Length = 477

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
 Frame = +3

Query: 27  VDFRHE------FCCVRRDVLLQV---LAAELPEGTIRYSSKIVSI----DEHGDGAKIL 167
           + F+H+       C +  D++L     LA E P   I   ++I  +    D + + ++ L
Sbjct: 142 IQFQHDNFASDVACIIENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSNHSE-L 200

Query: 168 HLADGSALRAKALIGCDGINSVVAR 242
            L DG       LIG DG NSVV +
Sbjct: 201 QLEDGRNFSCDLLIGADGANSVVRK 225



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>Y134_METJA (Q57598) Hypothetical protein MJ0134|
          Length = 282

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +3

Query: 6   TGEIATEVDFRHEFCCVRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADG 182
           TG++ T  D R EF  V R  LL+V       G I+   KI+ +DE  D    + + DG
Sbjct: 112 TGKVIT-YDIRPEFAKVARKNLLRV-------GAIKKGQKIIGLDEEFDDEDEIEIEDG 162



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>COQ6_SCHPO (Q9Y7Z9) Probable ubiquinone biosynthesis monooxgenase coq6 (EC|
           1.14.13.-)
          Length = 466

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 165 LHLADGSALRAKALIGCDGINSVVARWLGLAKPSHSGRS-ATRGLARYPDGHGFPPKFLQ 341
           +H      L  K LIG DG NS+V ++  ++ P  +  + A  G  +     G    F +
Sbjct: 182 IHTTTHGELTTKLLIGADGRNSIVRKYANISMPGWNYLTHAVVGTLKIDPLKGPAVAFQR 241

Query: 342 FFGNGFRFGFMPXHDTDVYWFYTWSPSP 425
           F   G    ++P  D +    + WS  P
Sbjct: 242 FLPTG-PLAYLPLPDNNA--TFVWSTRP 266



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>R13L4_ARATH (Q38834) Putative disease resistance RPP13-like protein 4|
          Length = 852

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 265 DGLASPSHLATTELIPSHPISAFARRAEPSARWRILAPSPCSSMETI 125
           D +AS  HLA   L  +HP+  F R  E     +IL  S C +++ +
Sbjct: 580 DEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQL 626



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>STHA_PSEFL (O05139) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 463

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
 Frame = +3

Query: 60  RDVLLQVLAAELPEG----------TIRYSSKIVSIDEHGDGAKILHLADGSALRAKALI 209
           RD LL  L +E+ +           T+R++ +   ++   +G  ILHL  G  ++A AL+
Sbjct: 206 RDQLLSFLDSEISQALSYHFSNNNITVRHNEEYDRVEGLDNGV-ILHLKSGKKIKADALL 264

Query: 210 GCDG 221
            C+G
Sbjct: 265 WCNG 268



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>CD3E_PIG (Q7YRN2) T-cell surface glycoprotein CD3 epsilon chain precursor|
          Length = 196

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 326 REAMAVGVTREATRGGAPRVRRLGEPQPSGHHGVDPVAPDQR 201
           R+A A+ VTR A  GG PR +    P P  +   +P+   QR
Sbjct: 144 RKAKAMPVTRGAGAGGRPRGQNRERPPPVPNPDYEPIRKGQR 185



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>VISC_ECOLI (P25535) Protein visC (EC 1.-.-.-)|
          Length = 400

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 147 GDGAKILHLADGSALRAKALIGCDGINS 230
           G+    L L DGS L A+ +IG DG NS
Sbjct: 141 GENETFLTLKDGSMLTARLVIGADGANS 168



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>DPH1_CRYNE (Q5KN81) Diphthamide biosynthesis protein 1|
          Length = 529

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 24/76 (31%), Positives = 34/76 (44%)
 Frame = +3

Query: 54  VRRDVLLQVLAAELPEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSV 233
           +RRD + Q +A ++PEG + Y   I  I E   GA  + LAD          G   I+  
Sbjct: 84  IRRDNV-QSVALQMPEGLMMYGCAIADIIERFTGALPMMLAD-------VTYGACCIDDY 135

Query: 234 VARWLGLAKPSHSGRS 281
            A+ +G     H G S
Sbjct: 136 TAKEMGAEMIVHYGHS 151



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>CD3E_SHEEP (P29328) T-cell surface glycoprotein CD3 epsilon chain precursor|
          Length = 192

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 326 REAMAVGVTREATRGGAPRVRRLGEPQPSGHHGVDPVAPDQR 201
           R+A A  +TR A  GG PR +    P P  +   +P+   QR
Sbjct: 140 RKAKATPMTRGAGAGGRPRGQNRERPPPVPNPDYEPIRKGQR 181



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>TFDB_RALEJ (P27138) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20)|
           (2,4-dichlorophenol hydroxylase) (2,4-DCP hydroxylase)
          Length = 598

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +3

Query: 78  VLAAELPEGTIRYSSKIVSIDEHGDG--AKILHLADGS--ALRAKALIGCDGINSVVARW 245
           V +A L    +R+ ++ +  ++  DG  +++    +G    +R+K LIG DG NS V   
Sbjct: 128 VKSAALDGCKVRFDTEYLGHEQDADGVSSRLRDRLNGEEFTVRSKYLIGADGANSRVVSD 187

Query: 246 LGLAKPSHSGRSATRGL 296
           L L      G+S +  L
Sbjct: 188 LDLPLEGTMGKSGSINL 204



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>TNR1A_HUMAN (P19438) Tumor necrosis factor receptor superfamily member 1A|
           precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55) (CD120a
           antigen) [Contains: Tumor necrosis factor receptor
           superfamily member 1A, membrane form; Tumor necrosis
           factor-binding prot
          Length = 455

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/88 (25%), Positives = 29/88 (32%)
 Frame = -3

Query: 442 STPSSSGEGDHV*NQ*TSVSXQGMKPKRKPLPKNCRNLGGKPWPSGXXXXXXXXXXXECD 263
           STP   GE +      T+       P   P P     LG  P PS            +C 
Sbjct: 251 STPEKEGELEG-----TTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYTPGDCP 305

Query: 262 GLASPSHLATTELIPSHPISAFARRAEP 179
             A+P          + PI A A  ++P
Sbjct: 306 NFAAPRREVAPPYQGADPILATALASDP 333



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>PRS27_MOUSE (Q8BJR6) Protease serine 27 precursor (EC 3.4.21.-) (Marapsin)|
           (Pancreasin)
          Length = 328

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 235 WPDGWGSPSRRTRGAPPRVASRV 303
           W  GWGSPS + R   PRV  ++
Sbjct: 162 WVTGWGSPSEQDRLPNPRVLQKL 184



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>RAM1_YEAST (P22007) Protein farnesyltransferase beta subunit (EC 2.5.1.58)|
           (CAAX farnesyltransferase beta subunit) (RAS proteins
           prenyltransferase beta) (FTase-beta)
          Length = 431

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 24  EVDFRHEFCCVRRDVLLQVLAAELPEGTIRY 116
           EVD R  +C +    LL +L  EL EG + Y
Sbjct: 207 EVDTRGIYCALSIATLLNILTEELTEGVLNY 237



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>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = +3

Query: 96  PEGTIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDGINSVVARWLGLAKPSHSG 275
           PE  +R + +++++D+H    + LH  +   L+         +  ++ R++ L      G
Sbjct: 8   PENVLRLADELIALDQHSSALQSLH--ETIVLKRSRNAQGFSLEPIMMRFIELCVHLRKG 65

Query: 276 RSATRGLARY 305
           + A  GL  Y
Sbjct: 66  KIAKEGLYTY 75



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>STHA_PSESM (Q884I6) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 463

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
 Frame = +3

Query: 60  RDVLLQVLAAELPEGTIRYSSKIVSIDEHG---------DGAKILHLADGSALRAKALIG 212
           RD LL  L +E+ +    + S    +  H          D   +LHL  G  ++A AL+ 
Sbjct: 206 RDQLLSFLDSEISQALSYHFSNNNVMVRHNEEYERVEGLDNGVVLHLKSGKKIKADALLW 265

Query: 213 CDG 221
           C+G
Sbjct: 266 CNG 268



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>STHA_PSEPK (Q88KY8) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 463

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 105 TIRYSSKIVSIDEHGDGAKILHLADGSALRAKALIGCDG 221
           T+R++ +   ++   +G  ILHL  G  ++A AL+ C+G
Sbjct: 231 TVRHNEEYERVEGLDNGV-ILHLKSGKKIKADALLWCNG 268



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>STHA_PSEAE (P57112) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 463

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +3

Query: 9   GEIATEVDFRHEFCCVRRDVLLQVLAAELPEGT--IRYSSKIVSIDEHGDGAKILHLADG 182
           G +   +D R +      D +   L+  L      IR++ +   ++   +G  ILHL  G
Sbjct: 197 GVLVDLIDTRDQLLSFLDDEISDALSYHLRNNNVLIRHNEEYERVEGLDNGV-ILHLKSG 255

Query: 183 SALRAKALIGCDG 221
             ++A AL+ C+G
Sbjct: 256 KKIKADALLWCNG 268


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,025,874
Number of Sequences: 219361
Number of extensions: 1002922
Number of successful extensions: 4252
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4250
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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