ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast62b05 |
|---|---|
| Clone Library Name | barley_pub |
>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor| Length = 252 Score = 102 bits (255), Expect = 4e-22 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 1/82 (1%) Frame = +1 Query: 220 YAKCEDLPQLGAALHWTYDESKSSLSLAFVAAPAGANG-WVAWALNPTGEGMAGAQALVA 396 + CEDLP L + LH+TY+ S SSLS+AFVA P+ ANG WVAWA+NPTG MAG+QA +A Sbjct: 40 FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLA 99 Query: 397 LKGSGAAAPTVRTYNITGYVPL 462 + G AAP V+TYNI+ Y L Sbjct: 100 YRSGGGAAPVVKTYNISSYSSL 121
>ABI2_HUMAN (Q9NYB9) Abl interactor 2 (Abelson interactor 2) (Abi-2)| (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1) Length = 513 Score = 32.7 bits (73), Expect = 0.47 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -1 Query: 449 PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASE 294 P ++ G+A PL ATSA APA P + + +T P A AG A N ++ Sbjct: 278 PPSVFPAPAGSAGTPPLPATSASAPAPLVPATVPS-STAPNAAAGGAPNLAD 328
>RA51B_HUMAN (O15315) DNA repair protein RAD51 homolog 2 (R51H2) (RAD51-like| protein 1) (Rad51B) Length = 384 Score = 32.3 bits (72), Expect = 0.62 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Frame = -1 Query: 386 ACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS*VQC------SAAPSCGRS 234 ACAP M + G+ AQ + +PA +T S D+ V C + P CG++ Sbjct: 59 ACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = -1 Query: 413 APEPLSATSACAPAMPSPVGLS-----AQATHPLA--PAGAATNASERDDLDSS*VQCSA 255 A PL SA +PA SP+ S A ATH A AG A + E +S +A Sbjct: 309 ATSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAA 368 Query: 254 APSCGRSSHLAY 219 A S S+H +Y Sbjct: 369 AASPAPSAHTSY 380
>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2| Length = 916 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = -1 Query: 419 AAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAA 309 AAAP P SA +A AP+ PS A P PAGA+ Sbjct: 204 AAAPAPSSAPAARAPSSPS------SAPRPARPAGAS 234
>CHEB1_PSEAE (O87125) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 368 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = -1 Query: 410 PEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASER 291 P P + +S+ APA S VG SA+ +PA A+T+A+ + Sbjct: 141 PLPSATSSSHAPASSSSVGASARVGAGASPAPASTSAAPK 180
>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2| Length = 902 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = -1 Query: 419 AAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAA 309 AAAP P SA +A AP+ PS A P PAGA+ Sbjct: 190 AAAPAPSSAPAARAPSSPS------SAPRPARPAGAS 220
>UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 316 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/55 (38%), Positives = 27/55 (49%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNA 300 P G P + V+ AAA +AT+A A A P G A A+ P P+ AA A Sbjct: 10 PCGLPPGVRLVVPAAAAASASNAATAAAAAA---PAGAGAGASKPARPSAAARPA 61
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 413 APEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS 273 AP+P S+ SA AP + SPV SA PL A T + SS Sbjct: 476 APKPPSSASASAPIIKSPVMNSAANVSPLKQTHAPTTPNRTSPNRSS 522
>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC| 2.7.11.1) (Ste-20-related kinase) (Serine/threonine-protein kinase 39) (Pancreatic serine/threonine-protein kinase) (PS/TK) (PSTK1) Length = 553 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = -1 Query: 425 VGAAAPEPLSATSACAPAMPSPVGLSAQATHPL---APAGAA 309 V AAA P +ATSA APA P+P +A A P APA AA Sbjct: 20 VTAAAAAPAAATSAPAPA-PAPAAPAAPAPAPAAAPAPAPAA 60 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPA 318 P PV AA P A + APA P+P +A A P A A Sbjct: 14 PQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAPAAAPAPAPAAQA 62
>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled| receptor R35) Length = 723 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = -1 Query: 422 GAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS*VQCSAAPSC 243 G AA LS T + A P P GLSA + PAG +T S R ++ V+ AA Sbjct: 442 GGAALAELSTTDS---ARPGPAGLSATDSARPGPAGFSTTDSARP--SAAGVRGEAASGL 496 Query: 242 GRS 234 GR+ Sbjct: 497 GRT 499
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%) Frame = -1 Query: 419 AAAPEPLSATSACA-----------PAMPSPVGLSAQATHPLAPAGAA 309 AAAP+ +AT+A A PA+ SP G + A+HP P AA Sbjct: 652 AAAPQSAAATAAAAAAASHHHYLSSPALASPAGSTNNASHPGNPQIAA 699
>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1 kinase) Length = 806 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = -1 Query: 419 AAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGA 312 A AP P A S+ P +P G +Q+T PL PAG+ Sbjct: 584 APAPAPAPAPSSAQPTS-TPTGPVSQSTGPLQPAGS 618
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASE--- 294 P G +L P P S+ S+C+ + S SA +T AP AT A+ Sbjct: 246 PGGLESPLLLDSPTSRTPPPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAAAAALL 305 Query: 293 -----RDDLDSS*VQCSAAPSCGRSSHLAY 219 +DL S C++ S G ++ A+ Sbjct: 306 YGPGGAEDLLSPGAPCASCSSSGANNAFAF 335
>MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein| Length = 454 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -1 Query: 449 PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNA 300 P ++++L V P P+ A APA S VG A APA AA A Sbjct: 185 PAVVFLLPVSKRNPVPVRVAPARAPARASAVG--AAVARAAAPATAAVAA 232
>DNAA_BURPS (Q63YW5) Chromosomal replication initiator protein dnaA| Length = 533 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 13/60 (21%) Frame = -1 Query: 419 AAAPEPLSATSACAPAM----PSPVGLSAQATHPLAPA---------GAATNASERDDLD 279 +A P P++ A APA+ P+P G++A +A A AA NA E DLD Sbjct: 102 SANPAPVAPGPASAPAVDAHAPAPAGMNAATAAAVAAAQAAQAAQANAAALNADEAADLD 161
>VP40_HHV11 (P10210) Capsid protein P40 (Virion structural protein UL26)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; UL26.5 protein; C-terminal peptide] Length = 635 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 27/63 (42%) Frame = -1 Query: 413 APEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS*VQCSAAPSCGRS 234 AP P A +AC P P P S Q PL A A+ ++S + A + + Sbjct: 554 APTPPYAPAACPPGPPPPPCPSTQTRAPLPTEPAFPPAATGSQPEASNAEAGALVNASSA 613 Query: 233 SHL 225 +H+ Sbjct: 614 AHV 616
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPV----GLSAQATHPLAPAGAAT--- 306 P+ T P V T +P P TS +P PSP G ++A +P A T Sbjct: 461 PASTGPT---VSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPT 517 Query: 305 -NASERDDLDSS*VQCSAAPSCGRSS 231 NA+ ++ + +P+ G++S Sbjct: 518 PNATSPTPAVTTPTPNATSPTLGKTS 543
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPV----GLSAQATHPLAPAGAAT--- 306 P+ T P V T +P P TS +P PSP G ++A +P A T Sbjct: 461 PASTGPT---VSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPT 517 Query: 305 -NASERDDLDSS*VQCSAAPSCGRSS 231 NA+ ++ + +P+ G++S Sbjct: 518 PNATSPTPAVTTPTPNATSPTLGKTS 543
>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)| Length = 232 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = -1 Query: 422 GAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNA 300 GAAAP P A + C+P+ P P L Q P+ AAT+A Sbjct: 129 GAAAPAP-PAAARCSPSPPRPAALPGQT----FPSYAATSA 164
>PROB_SYNY3 (P73071) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +1 Query: 286 SSLSLAFVAAPAGANG---WVAWALNPTGEGMAGAQALVALKGSGAAAPTVRTYNITG 450 ++L F A P N W+A+ L PTG+ A A+ ALK G + + + G Sbjct: 254 ANLGTQFEAQPRSDNARKRWIAYGLVPTGKIFIDAGAVQALKARGKSLLAIGVVALEG 311
>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) Length = 2995 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -1 Query: 449 PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERD 288 PV YV + AP P+S + ++ SP+G A + P P G A ++++ + Sbjct: 2618 PVPTYVPATCSLAPTPVSPSVIVVSSI-SPIGEGASSPTPETPTGQAVSSTKSE 2670
>STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich protein kinase (EC| 2.7.11.1) (Ste-20-related kinase) (Serine/threonine-protein kinase 39) Length = 556 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Frame = -1 Query: 419 AAAPEPLSATSACAPA-MPSPVGLSAQATHPL---APAGAA 309 AAA P +ATSA APA P+P +A A P APA AA Sbjct: 23 AAATAPAAATSAPAPAPAPAPAASAAPAPAPAAAPAPAPAA 63
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 425 VGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNAS 297 V A+AP P + T +P + +P + A T P+A AA A+ Sbjct: 141 VAASAPTPAAVTPVVSPVIATPPVVPANTTVPVAAPVAAVPAA 183
>DCOA_KLEPN (P13187) Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)| Length = 595 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -1 Query: 431 LTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLA 324 LT A AP P A A APA +P G T PLA Sbjct: 500 LTAAAPAPAPAPAP-ASAPAAAAPAGAGTPVTAPLA 534
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 416 AAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAA 309 AAP P + +A P P+P L+ HP P AA Sbjct: 259 AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAA 294
>COG5_HUMAN (Q9UP83) Conserved oligomeric Golgi complex component 5 (13S Golgi| transport complex 90 kDa subunit) (GTC-90) (Golgi transport complex 1) Length = 839 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 310 AAPAGANGWVAWALNPTGEGMAGAQALVAL-----KGSGAAAPTVR 432 A+P G + A +NP M G VA+ +GSGAAA TVR Sbjct: 12 ASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVR 57
>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)| (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24 (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein VP22A; C-terminal peptide] Length = 605 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Frame = -1 Query: 464 PSGT*PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLA-----PAGAATNA 300 P G P Y + P P + A A P P G A H +A AGAA N+ Sbjct: 484 PYGFQPHQSYEVPRYVPHPPPPPTSHQAAQAQPPPPGTQAPEAHCVAESTIPEAGAAGNS 543 Query: 299 SERDD 285 R+D Sbjct: 544 GPRED 548
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 29.3 bits (64), Expect = 5.2 Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 11/112 (9%) Frame = -1 Query: 422 GAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAG-AATNASERDDLDS---------- 276 GAAA S PA S SA PLAP G A A+ R DS Sbjct: 507 GAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAAPRRAPDSDSGDRGHGPL 566 Query: 275 S*VQCSAAPSCGRSSHLAYVFPAGNFSXXXXXXXXXXXXXXXATRSRSNSSA 120 + AAP S A V A + S A+ S ++SS+ Sbjct: 567 APASAGAAPPSASPSSQAAVAAASSSSASSSSASSSSASSSSASSSSASSSS 618
>TRAC_RHISN (P55419) Probable conjugal transfer protein traC| Length = 102 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/43 (44%), Positives = 21/43 (48%) Frame = +1 Query: 289 SLSLAFVAAPAGANGWVAWALNPTGEGMAGAQALVALKGSGAA 417 SL+ F GANG + P G AGA A A GSGAA Sbjct: 55 SLAKRFRGGQGGANGASSGGKKPDGNATAGASA--AAVGSGAA 95
>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)| Length = 482 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 380 APAMPSPVGLSAQATHPLA-PAGAATNASERDDLDSS*VQCSAAPSCGRSSHLAYVFPAG 204 A A S SA A+ A PA A + + ++ +AAP+ G++ LA P G Sbjct: 18 AAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNG 77 Query: 203 NFS 195 N S Sbjct: 78 NSS 80
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = -1 Query: 419 AAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS*VQCSAAPSCG 240 AAA +A ++ AP+ PS L ++ P G A +A R D+ + + AA G Sbjct: 49 AAAAAAAAAAASAAPSAPSDRLLFSRRGQGADPGGKAQDAQPRPDVARADPRLEAASGAG 108 Query: 239 RSS 231 S Sbjct: 109 ADS 111
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Frame = -1 Query: 410 PEPLSATSACAPAMPSPVGLSAQAT---HPLAPAGA 312 P P SAT+ APA P SA A P AP+ A Sbjct: 1403 PSPASATATAAPAAPEDAATSAAAAPGEGPAAPSSA 1438
>ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 553 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = -1 Query: 446 VMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAG 315 VML AAAP P +A A A A P+P A A AG Sbjct: 75 VMLEAANEPAAAPAPAAAAPAPAAAAPAPAPAPAAAPAAAPAAG 118
>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 915 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = -1 Query: 419 AAAP--EPLSATSACAPAMPSPVGLSAQA---THPLAPAGAATNASERDDLDSS*VQCSA 255 AA+P P ++ A APA P+PV + A P AP+ + A+ DL + ++ Sbjct: 441 AASPGEAPAASEGATAPATPAPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKPPETS 500 Query: 254 APSCGRSSHLAYVFPA 207 AP ++ A PA Sbjct: 501 APVVTPTASTAPPVPA 516
>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) (Phosphoprotein F1-20) Length = 901 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = -1 Query: 419 AAAP--EPLSATSACAPAMPSPVGLSAQA---THPLAPAGAATNASERDDLDSS*VQCSA 255 AA+P P ++ A APA P+PV + A P AP+ + A+ DL + ++ Sbjct: 441 AASPGEAPAASEGATAPATPAPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKPPETS 500 Query: 254 APSCGRSSHLAYVFPA 207 AP ++ A PA Sbjct: 501 APVVTPTASTAPPVPA 516
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 16/58 (27%) Frame = -1 Query: 431 LTVGAAAPEPL--SATSACAPAMPSPVG--------------LSAQATHPLAPAGAAT 306 +T A AP L S TS C P P+G +S TH AP G AT Sbjct: 1686 ITTTAVAPSKLMTSTTSTCLPPTSLPLGAAGMPVMPVGTPGQVSTPGTHASAPVGTAT 1743
>MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein| Length = 454 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 449 PVMLYVLTVGAAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNA 300 P ++++L V P P+ A APA VG A APA AA A Sbjct: 185 PAVVFLLPVSKRNPVPVRVAPARAPARAPAVG--AAVARAAAPASAAVAA 232
>TSC2_MOUSE (Q61037) Tuberin (Tuberous sclerosis 2 homolog protein)| Length = 1814 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = +1 Query: 352 NPTGEGMAGAQALVALKG----SGAAAPTVRTYNITGYVPL 462 +P G G Q VA K +GA PT N+ YVPL Sbjct: 1149 SPGGSASLGPQTAVAAKPEKPPAGAQLPTAEKTNLAAYVPL 1189
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = -1 Query: 419 AAAPEPLSATSACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS 273 AAAP A SA APA +A A P A A A +D S+ Sbjct: 2816 AAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKSAAAPAAAPAKDQTKSA 2864
>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 907 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Frame = -1 Query: 419 AAAP--EPLSATSACAPAMPSPVGLSAQA---THPLAPAGAATNASERDDL 282 AA+P P ++ A APA P+PV + A P AP+ + A+ DL Sbjct: 445 AASPGEAPAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAAPELDL 495 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,189,939 Number of Sequences: 219361 Number of extensions: 514042 Number of successful extensions: 3267 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 2981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3229 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
